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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045086 Staphylococcus pseudintermedius strain KCTC 43136 chromosome, complete genome 0 crisprs csa3,cas3,RT,WYL,PrimPol,cas4,DEDDh,DinG 0 0 205 0

Results visualization

1. NZ_CP045086
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 3263 3 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_2 20137 : 21307 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 24925 : 39588 14 Prochlorococcus_phage(22.22%) NA NA
DBSCAN-SWA_4 61203 : 72107 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 81762 : 83530 3 Pithovirus(50.0%) NA NA
DBSCAN-SWA_6 92593 : 95940 3 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_7 104409 : 107078 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_8 110427 : 115225 3 Pithovirus(33.33%) NA NA
DBSCAN-SWA_9 120371 : 121859 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_10 130219 : 131101 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_11 150624 : 152433 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 161360 : 163374 2 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_13 170452 : 175524 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_14 180212 : 183857 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_15 193243 : 197043 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_16 200871 : 203649 5 Catovirus(66.67%) NA NA
DBSCAN-SWA_17 212792 : 220715 8 Mycoplasma_phage(25.0%) NA NA
DBSCAN-SWA_18 226498 : 227347 1 Golden_Marseillevirus(100.0%) NA NA
DBSCAN-SWA_19 232894 : 236264 3 environmental_halophage(50.0%) NA NA
DBSCAN-SWA_20 242045 : 250135 12 Bacillus_virus(16.67%) NA NA
DBSCAN-SWA_21 254124 : 261117 6 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_22 267509 : 268814 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_23 278313 : 285061 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_24 289710 : 294542 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_25 301195 : 304456 3 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_26 315615 : 354530 35 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_27 359943 : 360696 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_28 374184 : 377484 2 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_29 380536 : 381103 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_30 388495 : 388975 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_31 393517 : 395616 2 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_32 398889 : 399651 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_33 403318 : 404344 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_34 408357 : 412404 4 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_35 416932 : 418687 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_36 423446 : 423845 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_37 440111 : 446259 6 Lactococcus_phage(33.33%) NA NA
DBSCAN-SWA_38 454486 : 480510 29 Streptococcus_phage(50.0%) protease,tRNA,integrase attL 453112:453125|attR 457566:457579
DBSCAN-SWA_39 488999 : 491026 3 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_40 500352 : 501021 1 Harp_seal_herpesvirus(100.0%) NA NA
DBSCAN-SWA_41 517603 : 576467 57 Bacillus_phage(20.0%) tRNA,protease,transposase,integrase attL 515224:515238|attR 547508:547522
DBSCAN-SWA_42 582792 : 584202 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 598081 : 608054 9 Tupanvirus(25.0%) tRNA NA
DBSCAN-SWA_44 618628 : 621034 2 Hokovirus(100.0%) NA NA
DBSCAN-SWA_45 627246 : 630144 2 Hokovirus(50.0%) tRNA NA
DBSCAN-SWA_46 633886 : 634504 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_47 644398 : 646102 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_48 660422 : 669535 7 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_49 674084 : 697093 16 Feldmannia_irregularis_virus(14.29%) transposase,integrase NA
DBSCAN-SWA_50 713405 : 714958 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_51 722985 : 723708 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_52 731023 : 731854 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_53 737089 : 740120 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_54 747751 : 748408 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_55 753662 : 755186 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_56 758334 : 759360 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_57 762412 : 765579 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_58 771327 : 771834 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_59 774871 : 782036 7 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_60 796139 : 796991 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_61 807514 : 816624 5 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_62 823196 : 835981 11 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_63 849041 : 864151 12 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_64 870771 : 872784 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_65 884545 : 885970 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_66 889742 : 890876 1 Brochothrix_phage(100.0%) NA NA
DBSCAN-SWA_67 904629 : 906052 2 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_68 916444 : 917425 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_69 926388 : 927486 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_70 932730 : 936716 3 Acinetobacter_phage(50.0%) transposase,integrase attL 931092:931108|attR 938324:938340
DBSCAN-SWA_71 954256 : 956317 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_72 961195 : 962239 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_73 968787 : 971902 3 Emiliania_huxleyi_virus(50.0%) NA NA
DBSCAN-SWA_74 983365 : 986741 4 Paenibacillus_phage(33.33%) NA NA
DBSCAN-SWA_75 995987 : 998485 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_76 1036656 : 1038171 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_77 1044359 : 1045100 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_78 1052459 : 1053146 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_79 1059807 : 1063831 3 Enterococcus_phage(66.67%) NA NA
DBSCAN-SWA_80 1071002 : 1071893 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_81 1076263 : 1080745 4 Bacillus_thuringiensis_phage(50.0%) NA NA
DBSCAN-SWA_82 1085513 : 1088510 1 Herpes_simplex_virus(100.0%) NA NA
DBSCAN-SWA_83 1107110 : 1108736 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_84 1112165 : 1115769 3 Klosneuvirus(50.0%) terminase,holin NA
DBSCAN-SWA_85 1121823 : 1122837 1 Pacmanvirus(100.0%) NA NA
DBSCAN-SWA_86 1128202 : 1129954 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_87 1144156 : 1146232 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_88 1156581 : 1161916 4 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_89 1165244 : 1166531 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_90 1174624 : 1175320 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_91 1187290 : 1187836 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_92 1202570 : 1204003 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_93 1210528 : 1213264 3 Diadromus_pulchellus_ascovirus(50.0%) NA NA
DBSCAN-SWA_94 1221285 : 1223634 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_95 1228525 : 1228954 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_96 1232021 : 1254476 24 Streptococcus_phage(90.0%) integrase attL 1234673:1234688|attR 1262639:1262654
DBSCAN-SWA_97 1265343 : 1266489 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_98 1271067 : 1273317 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_99 1280497 : 1280677 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_100 1306208 : 1307765 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_101 1314817 : 1316104 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_102 1335560 : 1336904 1 Aichi_virus(100.0%) NA NA
DBSCAN-SWA_103 1342134 : 1342632 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_104 1350254 : 1353530 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_105 1357598 : 1358885 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_106 1362058 : 1362961 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_107 1371486 : 1371702 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_108 1380215 : 1382837 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_109 1393805 : 1395002 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_110 1417269 : 1420359 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_111 1426030 : 1426759 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_112 1431310 : 1471402 64 Staphylococcus_phage(95.24%) portal,capsid,head,integrase,terminase,holin,tail attL 1426908:1426924|attR 1435239:1435255
DBSCAN-SWA_113 1483097 : 1484090 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_114 1487147 : 1487753 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_115 1500149 : 1503302 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_116 1507457 : 1511048 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_117 1527624 : 1529297 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_118 1532390 : 1533827 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_119 1540273 : 1543108 1 Yellowstone_lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_120 1548307 : 1555650 5 Pandoravirus(33.33%) NA NA
DBSCAN-SWA_121 1566909 : 1567872 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_122 1575455 : 1576904 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_123 1584902 : 1585808 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_124 1595403 : 1597206 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_125 1608374 : 1616716 3 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_126 1620877 : 1621657 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_127 1631757 : 1633059 1 Geobacillus_virus(100.0%) NA NA
DBSCAN-SWA_128 1640037 : 1646910 5 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_129 1657308 : 1665188 9 Bacillus_virus(25.0%) NA NA
DBSCAN-SWA_130 1680488 : 1685800 6 Golden_Marseillevirus(50.0%) NA NA
DBSCAN-SWA_131 1691865 : 1693353 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_132 1696469 : 1700918 7 Yellowstone_lake_mimivirus(33.33%) NA NA
DBSCAN-SWA_133 1715583 : 1720402 4 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_134 1724191 : 1730096 3 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_135 1736750 : 1739959 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_136 1746128 : 1750827 5 uncultured_virus(66.67%) NA NA
DBSCAN-SWA_137 1754235 : 1755111 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_138 1769020 : 1784096 13 Bacillus_virus(42.86%) NA NA
DBSCAN-SWA_139 1791497 : 1793966 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_140 1797304 : 1798708 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_141 1805708 : 1806269 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_142 1816156 : 1817494 1 environmental_Halophage(100.0%) NA NA
DBSCAN-SWA_143 1823241 : 1824987 1 Micromonas_pusilla_virus(100.0%) NA NA
DBSCAN-SWA_144 1833505 : 1835242 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_145 1855474 : 1856200 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_146 1883753 : 1887530 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_147 1895014 : 1899260 5 Staphylococcus_phage(100.0%) head NA
DBSCAN-SWA_148 1907857 : 1929255 24 Staphylococcus_phage(95.0%) NA NA
DBSCAN-SWA_149 1933373 : 1941165 6 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_150 1951437 : 1956147 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_151 1964265 : 1965975 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_152 1969277 : 1978206 8 Staphylococcus_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_153 1981641 : 1988046 9 Staphylococcus_phage(57.14%) transposase,head,portal NA
DBSCAN-SWA_154 2007750 : 2010942 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_155 2015717 : 2017478 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_156 2020646 : 2027304 4 Alteromonas_phage(25.0%) NA NA
DBSCAN-SWA_157 2031205 : 2036990 4 Brevibacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_158 2041277 : 2042540 1 Bacillus_virus(100.0%) protease NA
DBSCAN-SWA_159 2051926 : 2054557 1 Klosneuvirus(100.0%) tRNA NA
DBSCAN-SWA_160 2063823 : 2098921 30 uncultured_Mediterranean_phage(22.22%) tRNA NA
DBSCAN-SWA_161 2112042 : 2124418 10 Bacillus_phage(20.0%) NA NA
DBSCAN-SWA_162 2127519 : 2128806 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_163 2133536 : 2134481 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_164 2137619 : 2143958 5 Catovirus(33.33%) tRNA NA
DBSCAN-SWA_165 2147554 : 2154343 7 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_166 2159845 : 2160688 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_167 2165222 : 2165852 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_168 2171425 : 2174237 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_169 2181628 : 2184045 3 Indivirus(100.0%) NA NA
DBSCAN-SWA_170 2197638 : 2219330 24 Brevibacillus_phage(18.18%) NA NA
DBSCAN-SWA_171 2228224 : 2233218 6 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_172 2240414 : 2247529 5 unidentified_phage(25.0%) tRNA NA
DBSCAN-SWA_173 2251425 : 2253139 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_174 2259904 : 2273907 18 Staphylococcus_phage(42.86%) NA NA
DBSCAN-SWA_175 2281075 : 2281873 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_176 2286044 : 2288991 5 Lactobacillus_phage(50.0%) lysis NA
DBSCAN-SWA_177 2297478 : 2299089 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_178 2304274 : 2306074 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_179 2312191 : 2314014 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_180 2325094 : 2329503 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_181 2334724 : 2336359 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_182 2345571 : 2348407 3 Phage_Wrath(50.0%) NA NA
DBSCAN-SWA_183 2360198 : 2363373 4 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_184 2366761 : 2367070 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_185 2383057 : 2387610 2 Wolbachia_phage(50.0%) NA NA
DBSCAN-SWA_186 2395531 : 2401438 5 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_187 2405615 : 2411291 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_188 2419765 : 2428620 6 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_189 2434495 : 2435257 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_190 2439671 : 2450779 10 Erwinia_phage(20.0%) tRNA,protease NA
DBSCAN-SWA_191 2464483 : 2467298 2 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_192 2470745 : 2471330 1 Listeria_phage(100.0%) NA NA
DBSCAN-SWA_193 2479410 : 2482235 3 Micromonas_pusilla_virus(33.33%) NA NA
DBSCAN-SWA_194 2496437 : 2498444 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_195 2501592 : 2502525 1 Prochlorococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_196 2507384 : 2511411 4 Abalone_herpesvirus(50.0%) NA NA
DBSCAN-SWA_197 2516965 : 2526942 8 Halovirus(25.0%) tRNA NA
DBSCAN-SWA_198 2557468 : 2557666 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_199 2561315 : 2561900 1 Cassava_brown_streak_virus(100.0%) NA NA
DBSCAN-SWA_200 2568402 : 2572869 3 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_201 2578700 : 2579771 1 Bodo_saltans_virus(100.0%) tRNA NA
DBSCAN-SWA_202 2583405 : 2586167 5 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_203 2595051 : 2598206 2 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_204 2602877 : 2604728 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_205 2612162 : 2616408 4 Mycoplasma_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage