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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045118 Pseudomonas sp. SCB32 chromosome, complete genome 5 crisprs DinG,DEDDh,cas3,csa3 0 1 5 0

Results visualization

1. NZ_CP045118
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045118_1 169147-169329 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045118_2 209956-210032 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045118_3 2641711-2641819 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045118_4 5727694-5727794 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045118_5 5890709-5890822 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP045118_2 2.1|209979|31|NZ_CP045118|CRISPRCasFinder 209979-210009 31 NC_049489 Arthrobacter phage DrYang, complete genome 62808-62838 9 0.71
NZ_CP045118_2 2.1|209979|31|NZ_CP045118|CRISPRCasFinder 209979-210009 31 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 1565036-1565066 9 0.71
NZ_CP045118_2 2.1|209979|31|NZ_CP045118|CRISPRCasFinder 209979-210009 31 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1486273-1486303 9 0.71
NZ_CP045118_2 2.1|209979|31|NZ_CP045118|CRISPRCasFinder 209979-210009 31 NZ_CP032340 Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence 328445-328475 9 0.71
NZ_CP045118_2 2.1|209979|31|NZ_CP045118|CRISPRCasFinder 209979-210009 31 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 1493316-1493346 9 0.71
NZ_CP045118_2 2.1|209979|31|NZ_CP045118|CRISPRCasFinder 209979-210009 31 NZ_CP012915 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence 57563-57593 9 0.71

1. spacer 2.1|209979|31|NZ_CP045118|CRISPRCasFinder matches to NC_049489 (Arthrobacter phage DrYang, complete genome) position: , mismatch: 9, identity: 0.71

gaaacccaagccggtggaaagggccatcccc	CRISPR spacer
gaaacccaagcccgtggaaaggaaagaacag	Protospacer
************ *********.  .  *  

2. spacer 2.1|209979|31|NZ_CP045118|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.71

gaaacccaagccggtggaaagggccatcccc	CRISPR spacer
ccacaccatgccggtggaaaaggccatcgag	Protospacer
  *  *** ***********.*******   

3. spacer 2.1|209979|31|NZ_CP045118|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.71

gaaacccaagccggtggaaagggccatcccc	CRISPR spacer
ccacaccatgccggtggaaaaggccatcgag	Protospacer
  *  *** ***********.*******   

4. spacer 2.1|209979|31|NZ_CP045118|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.71

gaaacccaagccggtggaaagggccatcccc	CRISPR spacer
ccacaccatgccggtggaaaaggccatcgag	Protospacer
  *  *** ***********.*******   

5. spacer 2.1|209979|31|NZ_CP045118|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.71

gaaacccaagccggtggaaagggccatcccc	CRISPR spacer
ccacaccatgccggtggaaaaggccatcgag	Protospacer
  *  *** ***********.*******   

6. spacer 2.1|209979|31|NZ_CP045118|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.71

gaaacccaagccggtggaaagggccatcccc	CRISPR spacer
ccacaccatgccggtggaaaaggccatcgag	Protospacer
  *  *** ***********.*******   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 562113 : 602662 47 Pseudomonas_phage(72.22%) capsid,head,terminase,portal,tRNA,tail,integrase attL 560871:560920|attR 593139:593188
DBSCAN-SWA_2 2430735 : 2438617 14 uncultured_Caudovirales_phage(70.0%) protease,tail NA
DBSCAN-SWA_3 2981781 : 3025651 34 uncultured_Caudovirales_phage(50.0%) transposase,integrase,plate attL 2984641:2984660|attR 3028050:3028069
DBSCAN-SWA_4 4567767 : 4575561 7 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_5 6232889 : 6281624 36 Brucella_phage(28.57%) protease,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage