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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045144 Ancylobacter sp. TS-1 chromosome, complete genome 6 crisprs csa3,DEDDh 0 1 4 0

Results visualization

1. NZ_CP045144
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045144_1 31726-31828 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045144_2 1159459-1159539 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045144_3 1324398-1324478 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045144_4 2256545-2256660 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045144_5 3019464-3019573 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045144_6 3300517-3300612 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP045144_3 3.1|1324421|35|NZ_CP045144|CRISPRCasFinder 1324421-1324455 35 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 796634-796668 10 0.714

1. spacer 3.1|1324421|35|NZ_CP045144|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.714

aagcgggatgcgctccgccgacgctgcgtcttctc	CRISPR spacer
cagcgggatgcgcgccgccgtcgctgccagcttct	Protospacer
 ************ ****** ******   .*...

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 99535 : 118662 25 Paracoccus_phage(25.0%) tail,protease,head,portal,capsid NA
DBSCAN-SWA_2 791642 : 804832 11 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_3 825343 : 897077 86 Ochrobactrum_phage(32.35%) tail,holin,integrase,transposase,plate,capsid attL 867392:867410|attR 897461:897479
DBSCAN-SWA_4 1016966 : 1028745 13 uncultured_Mediterranean_phage(81.82%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage