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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP041166 Sulfurimonas sp. 1-1N chromosome, complete genome 2 crisprs csa3,DEDDh,WYL,cas3,RT 0 1 146 0

Results visualization

1. NZ_CP041166
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041166_1 1113140-1113319 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041166_2 1249646-1249741 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP041166_2 2.1|1249676|36|NZ_CP041166|CRISPRCasFinder 1249676-1249711 36 KT264829 Gokushovirus WZ-2015a isolate 81Fra17, complete genome 1801-1836 7 0.806

1. spacer 2.1|1249676|36|NZ_CP041166|CRISPRCasFinder matches to KT264829 (Gokushovirus WZ-2015a isolate 81Fra17, complete genome) position: , mismatch: 7, identity: 0.806

agatatgcgaaaggcaggtcttaatccaattctcgc	CRISPR spacer
tgacttgcgtaaagcaggtcttaatccaattctttc	Protospacer
 **. **** **.********************. *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 8245 6 Rhizobium_phage(25.0%) tRNA NA
DBSCAN-SWA_2 11685 : 14066 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_3 22343 : 29533 6 Helicobacter_phage(33.33%) NA NA
DBSCAN-SWA_4 46779 : 54223 4 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_5 65478 : 75329 5 Leptospira_phage(33.33%) NA NA
DBSCAN-SWA_6 88241 : 88661 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_7 91986 : 95033 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_8 98055 : 98781 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_9 101988 : 106058 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_10 116622 : 117333 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_11 121565 : 129568 8 Diachasmimorpha_longicaudata_entomopoxvirus(25.0%) tRNA NA
DBSCAN-SWA_12 138107 : 141613 3 Acanthamoeba_polyphaga_moumouvirus(50.0%) NA NA
DBSCAN-SWA_13 145388 : 153212 9 Indivirus(25.0%) NA NA
DBSCAN-SWA_14 161305 : 169014 9 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_15 173913 : 178849 5 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_16 192581 : 193127 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_17 206350 : 212510 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_18 232167 : 240459 5 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_19 244077 : 256125 5 Tokyovirus(33.33%) NA NA
DBSCAN-SWA_20 267958 : 269167 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_21 273528 : 274980 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_22 278301 : 284197 8 Paramecium_bursaria_Chlorella_virus(66.67%) NA NA
DBSCAN-SWA_23 292921 : 295634 4 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_24 305967 : 311887 3 Moraxella_phage(33.33%) NA NA
DBSCAN-SWA_25 328759 : 336810 9 Lactococcus_phage(25.0%) tRNA NA
DBSCAN-SWA_26 340928 : 341153 1 Spodoptera_frugiperda_granulovirus(100.0%) NA NA
DBSCAN-SWA_27 352045 : 357058 5 Agrobacterium_phage(25.0%) protease NA
DBSCAN-SWA_28 366228 : 367323 1 Faustovirus(100.0%) NA NA
DBSCAN-SWA_29 377157 : 382824 8 Hokovirus(25.0%) NA NA
DBSCAN-SWA_30 393074 : 403142 9 Bathycoccus_sp._RCC1105_virus(25.0%) NA NA
DBSCAN-SWA_31 411736 : 412768 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_32 415918 : 435741 18 Leptospira_phage(16.67%) protease NA
DBSCAN-SWA_33 444754 : 445378 1 Bacteroides_phage(100.0%) NA NA
DBSCAN-SWA_34 455350 : 460357 4 Tupanvirus(66.67%) NA NA
DBSCAN-SWA_35 469381 : 474926 5 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_36 486808 : 488494 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_37 492757 : 511727 18 Klosneuvirus(14.29%) integrase,protease,tRNA attL 484994:485009|attR 499556:499571
DBSCAN-SWA_38 520648 : 524285 3 uncultured_virus(66.67%) NA NA
DBSCAN-SWA_39 527408 : 534142 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_40 537250 : 539542 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_41 545878 : 548359 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_42 552575 : 557239 3 Ostreococcus_tauri_virus(50.0%) NA NA
DBSCAN-SWA_43 576550 : 576802 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_44 586986 : 595442 9 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_45 600732 : 601497 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_46 608484 : 617309 7 Felis_catus_gammaherpesvirus(25.0%) protease NA
DBSCAN-SWA_47 626383 : 632217 4 Salmonella_phage(50.0%) tRNA NA
DBSCAN-SWA_48 639134 : 644753 4 Acinetobacter_phage(25.0%) tRNA NA
DBSCAN-SWA_49 650382 : 654560 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_50 673874 : 681507 8 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_51 685251 : 686361 1 Campylobacter_phage(100.0%) NA NA
DBSCAN-SWA_52 689914 : 697889 5 Sinorhizobium_phage(33.33%) integrase,tRNA attL 691797:691811|attR 695502:695516
DBSCAN-SWA_53 701366 : 705499 4 Bodo_saltans_virus(50.0%) tRNA NA
DBSCAN-SWA_54 710389 : 720995 9 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_55 727209 : 730353 1 Liberibacter_phage(100.0%) NA NA
DBSCAN-SWA_56 734541 : 735420 1 uncultured_phage(100.0%) NA NA
DBSCAN-SWA_57 741296 : 743202 2 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_58 757096 : 758089 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_59 764646 : 766236 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_60 788024 : 799062 9 Moumouvirus(33.33%) tRNA NA
DBSCAN-SWA_61 814432 : 816613 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_62 823743 : 832142 5 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_63 838133 : 839339 1 Helicobacter_phage(100.0%) integrase attL 824563:824577|attR 844321:844335
DBSCAN-SWA_64 850362 : 852390 2 Aureococcus_anophage(50.0%) NA NA
DBSCAN-SWA_65 858050 : 859307 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_66 870507 : 874085 3 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_67 883058 : 883499 1 Faustovirus(100.0%) NA NA
DBSCAN-SWA_68 886532 : 887561 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_69 898294 : 899680 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_70 907133 : 909962 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_71 919827 : 920541 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_72 924558 : 926665 3 Acinetobacter_phage(50.0%) tRNA NA
DBSCAN-SWA_73 937973 : 940349 2 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_74 947346 : 951635 4 Bacteriophage(33.33%) NA NA
DBSCAN-SWA_75 975771 : 987273 12 Escherichia_phage(25.0%) tRNA NA
DBSCAN-SWA_76 992953 : 994666 3 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_77 1000081 : 1001836 1 Powai_lake_megavirus(100.0%) tRNA NA
DBSCAN-SWA_78 1008631 : 1010982 3 Pseudomonas_virus(50.0%) tRNA NA
DBSCAN-SWA_79 1014425 : 1016282 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_80 1021454 : 1027455 7 Enterococcus_phage(33.33%) protease NA
DBSCAN-SWA_81 1038115 : 1040846 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_82 1052392 : 1054897 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_83 1062249 : 1065351 1 Clostridioides_phage(100.0%) NA NA
DBSCAN-SWA_84 1071597 : 1074300 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_85 1089850 : 1091494 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_86 1098254 : 1099556 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_87 1103040 : 1112884 10 Listeria_phage(20.0%) NA NA
DBSCAN-SWA_88 1117469 : 1118252 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_89 1124795 : 1128899 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_90 1132148 : 1138738 6 Salmonella_phage(33.33%) integrase attL 1123868:1123882|attR 1140295:1140309
DBSCAN-SWA_91 1144105 : 1145290 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_92 1152659 : 1165075 10 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_93 1168970 : 1169768 1 Listeria_phage(100.0%) NA NA
DBSCAN-SWA_94 1196114 : 1197239 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_95 1215983 : 1219232 5 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_96 1225187 : 1226662 2 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_97 1237303 : 1244601 7 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_98 1250511 : 1259847 10 Ralstonia_phage(25.0%) NA NA
DBSCAN-SWA_99 1267008 : 1268337 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_100 1280466 : 1281225 1 Escherichia_phage(100.0%) tRNA NA
DBSCAN-SWA_101 1294630 : 1298540 5 Leptospira_phage(25.0%) tRNA NA
DBSCAN-SWA_102 1320883 : 1323880 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_103 1332763 : 1336575 3 Nitratiruptor_phage(50.0%) integrase attL 1323990:1324016|attR 1333705:1333731
DBSCAN-SWA_104 1345490 : 1349634 5 Indivirus(50.0%) protease NA
DBSCAN-SWA_105 1355839 : 1368898 9 Ralstonia_phage(16.67%) NA NA
DBSCAN-SWA_106 1382694 : 1389599 6 Leptospira_phage(33.33%) NA NA
DBSCAN-SWA_107 1404722 : 1405166 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_108 1409250 : 1416814 10 Anomala_cuprea_entomopoxvirus(25.0%) tRNA NA
DBSCAN-SWA_109 1423113 : 1423902 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_110 1429430 : 1433154 3 Pneumococcus_phage(50.0%) NA NA
DBSCAN-SWA_111 1437094 : 1445550 8 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_112 1454245 : 1457592 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_113 1460692 : 1464114 3 Bathycoccus_sp._RCC1105_virus(50.0%) NA NA
DBSCAN-SWA_114 1494768 : 1499311 3 uncultured_phage(50.0%) integrase NA
DBSCAN-SWA_115 1505862 : 1518683 10 Hokovirus(20.0%) NA NA
DBSCAN-SWA_116 1523317 : 1524130 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_117 1527566 : 1534304 8 Vibrio_phage(33.33%) protease,tRNA NA
DBSCAN-SWA_118 1539687 : 1546613 10 uncultured_virus(25.0%) protease NA
DBSCAN-SWA_119 1556104 : 1557691 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_120 1561165 : 1562170 1 Phaeocystis_globosa_virus(100.0%) tRNA NA
DBSCAN-SWA_121 1571406 : 1578094 6 Leptospira_phage(50.0%) integrase attL 1567754:1567768|attR 1580535:1580549
DBSCAN-SWA_122 1598304 : 1599873 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_123 1603656 : 1617907 12 Bacillus_virus(28.57%) NA NA
DBSCAN-SWA_124 1622045 : 1622789 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_125 1627460 : 1629706 3 Murmansk_poxvirus(50.0%) NA NA
DBSCAN-SWA_126 1634921 : 1636286 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_127 1643156 : 1645066 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_128 1669143 : 1684294 17 Megavirus(14.29%) NA NA
DBSCAN-SWA_129 1688195 : 1690433 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_130 1695945 : 1703471 8 Tetraselmis_virus(16.67%) protease NA
DBSCAN-SWA_131 1707907 : 1712448 5 Cyanophage(50.0%) NA NA
DBSCAN-SWA_132 1719624 : 1724987 5 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_133 1734847 : 1735663 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_134 1738953 : 1739712 1 Campylobacter_virus(100.0%) NA NA
DBSCAN-SWA_135 1750274 : 1752662 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_136 1761321 : 1764069 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_137 1771553 : 1774614 3 Halovirus(50.0%) NA NA
DBSCAN-SWA_138 1779547 : 1781871 2 Agrobacterium_phage(50.0%) tRNA NA
DBSCAN-SWA_139 1791194 : 1793410 2 Aeromonas_phage(50.0%) NA NA
DBSCAN-SWA_140 1817992 : 1832431 16 Streptococcus_phage(12.5%) NA NA
DBSCAN-SWA_141 1845768 : 1847964 3 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_142 1854958 : 1855954 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_143 1882050 : 1885294 2 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_144 1891945 : 1894366 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_145 1897827 : 1900871 3 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_146 1908303 : 1914362 5 Gordonia_phage(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage