CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP045219	Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence	0 crisprs	NA	0
NZ_CP045217	Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence	0 crisprs	NA	1
NZ_CP045216	Pantoea dispersa strain BJQ0007 chromosome, complete genome	10 crisprs	cas3,DEDDh,csa3,DinG	9
NZ_CP045218	Pantoea dispersa strain BJQ0007 plasmid unnamed2, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10259 : 61232

Enterobacteria_phage(75.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024143560.1\|10259_11183_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.3e-173	97.7
WP_032416767.1\|11346_11781_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_003026799.1\|12019_12286_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_152391583.1\|12273_12756_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_152391584.1\|13825_14230_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024143560.1\|15544_16468_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.3e-173	97.7
WP_032416808.1\|16671_17007_+	TonB family protein	NA	NA	NA	NA
WP_152391585.1\|17481_18123_+	hypothetical protein	NA	NA	NA	NA
WP_024143560.1\|18479_19403_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.3e-173	97.7
WP_152391586.1\|20021_20933_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.0e-171	97.7
WP_038628583.1\|21438_21909_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_038628585.1\|21924_22347_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_152391609.1\|22436_25199_-	PRD domain-containing protein	NA	NA	NA	NA
WP_152391587.1\|25390_26380_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_152391610.1\|26487_27507_-	hypothetical protein	NA	NA	NA	NA
WP_152391588.1\|27578_28349_-	hypothetical protein	NA	NA	NA	NA
WP_024143560.1\|28831_29755_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.3e-173	97.7
WP_152391589.1\|29881_30874_+	AAA domain-containing protein	NA	NA	NA	NA
WP_152391590.1\|31041_31281_+	hypothetical protein	NA	NA	NA	NA
WP_038628597.1\|31348_31720_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_152391591.1\|31725_32502_+	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein	NA	NA	NA	NA
WP_152391592.1\|32498_33065_+	serine kinase	NA	NA	NA	NA
WP_038628601.1\|33051_33654_+	HrpE/YscL family type III secretion apparatus protein	NA	NA	NA	NA
WP_038628603.1\|33728_33956_+	HrpF protein	NA	NA	NA	NA
WP_104951622.1\|34066_36121_+	EscC/YscC/HrcC family type III secretion system outer membrane ring protein	R9TEZ5	Vibrio_phage	1.3e-12	25.4
WP_102752010.1\|36129_36318_+	type III secretion protein HrpT	NA	NA	NA	NA
WP_152391593.1\|36504_41880_+	AvrE-family type 3 secretion system effector	NA	NA	NA	NA
WP_038628609.1\|41892_42324_+	Tir chaperone family protein	NA	NA	NA	NA
WP_102752012.1\|42450_43536_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA
WP_038628614.1\|43528_44344_-	EscT/YscT/HrcT family type III secretion system export apparatus protein	NA	NA	NA	NA
WP_038628616.1\|44343_44604_-	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA
WP_102752026.1\|44611_45259_-	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA
WP_152391594.1\|45271_45697_-	type III secretion system protein	NA	NA	NA	NA
WP_152391595.1\|45672_46311_-	hypothetical protein	NA	NA	NA	NA
WP_152391596.1\|46307_46970_-	hypothetical protein	NA	NA	NA	NA
WP_152391597.1\|46966_47422_-	type III secretion protein	NA	NA	NA	NA
WP_102752017.1\|47405_48761_-	EscN/YscN/HrcN family type III secretion system ATPase	NA	NA	NA	NA
WP_102752018.1\|48754_49615_-	type III secretion protein	NA	NA	NA	NA
WP_038628627.1\|49614_51825_-	type III secretion protein HrpI	NA	NA	NA	NA
WP_102752020.1\|51849_52968_-	YopN family type III secretion system gatekeeper subunit	NA	NA	NA	NA
WP_152391598.1\|53254_53800_+	sigma-70 family RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	7.7e-05	24.4
WP_102752022.1\|53915_55400_+	PAS domain S-box protein	NA	NA	NA	NA
WP_084971144.1\|55407_56049_+	response regulator transcription factor	NA	NA	NA	NA
WP_152391599.1\|56127_58497_-	beta-glucosidase	NA	NA	NA	NA
WP_152391600.1\|58500_59877_-	MFS transporter	NA	NA	NA	NA
WP_152390871.1\|60308_61232_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	3.3e-173	98.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045216

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045216_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_1

177609-177716

Orphan

Consensus_repeat	Method
ACCAGGTGCGCATCAATGCGCACCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_1

>merge|NZ_CP045216|1|177609-177716|CRISPRCasFinder
ACCAGGTGCGCATCAATGCGCACCCTGTAAAAACCCTGCAGTGCCCCGTAGGGTCGCCATTCATGGCGACCTGACCAGTCGTACCAGGTGCGCATGAATGCGCACCCT

>NZ_CP045216|1|1|177609-177716|CRISPRCasFinder
ACCAGGTGCGCATCAATGCGCACCCT	GTAAAAACCCTGCAGTGCCCCGTAGGGTCGCCATTCATGGCGACCTGACCAGTCGT
ACCAGGTGCGCATGAATGCGCACCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_021507879.1\|169834_169924_+\|K(+)-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP045216.1\|WP_152390343.1\|187202_188024_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235813
NZ_CP045216.1\|WP_021507880.1\|168562_169726_+\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP045216.1\|WP_058780224.1\|174351_177027_+\|two-component-system-sensor-histidine-kinase-KdbD	unknown	unknown	gnl\|CDD\|236701
NZ_CP045216.1\|WP_021507871.1\|180029_181379_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP045216.1\|WP_058759357.1\|165211_165535_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376019
NZ_CP045216.1\|WP_021507876.1\|173670_174243_+\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|234724
NZ_CP045216.1\|WP_152390341.1\|178767_179976_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP045216.1\|WP_152390339.1\|169923_171603_+\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|235494
NZ_CP045216.1\|WP_152390342.1\|186204_187107_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP045216.1\|WP_021507870.1\|181405_181753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_021508093.1\|185561_186203_+\|hydrolase	unknown	unknown	gnl\|CDD\|238494
NZ_CP045216.1\|WP_021507877.1\|171610_173659_+\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP045216.1\|WP_104094189.1\|167026_168421_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_CP045216.1\|WP_059012349.1\|184390_185308_-\|bestrophin	unknown	unknown	gnl\|CDD\|226304
NZ_CP045216.1\|WP_058759350.1\|181914_182811_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP045216.1\|WP_021507874.1\|177081_177582_+\|TIGR00645-family-protein	unknown	unknown	gnl\|CDD\|179964
NZ_CP045216.1\|WP_064511431.1\|183162_184314_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP045216.1\|WP_152390340.1\|177744_178674_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP045216.1\|WP_152390338.1\|165675_166590_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380524

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_152390343.1\|187202_188024_+\|SDR-family-oxidoreductase	gnl\|CDD\|235813	PRK06482, PRK06482, SDR family oxidoreductase.	7.01487e-144
NZ_CP045216.1\|WP_021507880.1\|168562_169726_+\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.57923e-81
NZ_CP045216.1\|WP_058780224.1\|174351_177027_+\|two-component-system-sensor-histidine-kinase-KdbD	gnl\|CDD\|236701	PRK10490, PRK10490, sensor protein KdpD; Provisional.	0
NZ_CP045216.1\|WP_021507871.1\|180029_181379_+\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	4.51659e-45
NZ_CP045216.1\|WP_058759357.1\|165211_165535_+\|hypothetical-protein	gnl\|CDD\|376019	pfam18593, CdiI_2, CdiI immunity protein. Contact-dependent growth inhibition (CDI) is an important mechanism of inter-bacterial competition found in many Gram-negative pathogens. CDI+ cells express cell-surface CdiA proteins that bind neighboring bacteria and deliver C-terminal toxin domains (CdiA-CT) to inhibit target-cell growth. CDI+ bacteria also produce CdiI immunity proteins, which specifically neutralize cognate CdiA-CT toxins to prevent self-inhibition. Structure analysis of CdiI immunity protein from Yersinia kristensenii shows that it is composed of eight alpha-helices packed together to form a nearly spherical structure with weak structural homology to a putative TetR family transcriptional repressor. The CdiI protein fits into the curved cavity of the CdiA-CTYkris toxin domain where it most likely neutralizes toxin activity by blocking access to RNA substrates. This domain is mostly found in gammaproteobacteria.	4.59894e-19
NZ_CP045216.1\|WP_021507876.1\|173670_174243_+\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|234724	PRK00315, PRK00315, potassium-transporting ATPase subunit KdpC.	3.65513e-107
NZ_CP045216.1\|WP_152390341.1\|178767_179976_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.44147e-55
NZ_CP045216.1\|WP_152390339.1\|169923_171603_+\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|235494	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional.	0
NZ_CP045216.1\|WP_152390342.1\|186204_187107_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.06571e-86
NZ_CP045216.1\|WP_021508093.1\|185561_186203_+\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.5817e-69
NZ_CP045216.1\|WP_021507877.1\|171610_173659_+\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP045216.1\|WP_104094189.1\|167026_168421_+\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.93882e-107
NZ_CP045216.1\|WP_059012349.1\|184390_185308_-\|bestrophin	gnl\|CDD\|226304	COG3781, COG3781, Predicted membrane protein [Function unknown].	5.42946e-119
NZ_CP045216.1\|WP_058759350.1\|181914_182811_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	3.99396e-14
NZ_CP045216.1\|WP_021507874.1\|177081_177582_+\|TIGR00645-family-protein	gnl\|CDD\|179964	PRK05208, PRK05208, hypothetical protein; Provisional.	8.52212e-86
NZ_CP045216.1\|WP_064511431.1\|183162_184314_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.64496e-21
NZ_CP045216.1\|WP_152390340.1\|177744_178674_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.78977e-57
NZ_CP045216.1\|WP_152390338.1\|165675_166590_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380524	cd06301, PBP1_rhizopine_binding-like, periplasmic binding proteins specific to rhizopines. Periplasmic binding proteins specific to rhizopines, which are simple sugar-like compounds produced in the nodules induced by the symbiotic root nodule bacteria, such as Rhizobium and Sinorhizobium. Rhizopine-binding-like proteins from other bacteria are also included. Two inositol based rhizopine compounds are known to date: L-3-O-methly-scyllo-inosamine (3-O-MSI) and scyllo-inosamine. Bacterial strains that can metabolize rhizopine have a greater competitive advantage in nodulation and rhizopine synthesis is regulated by NifA/NtrA regulatory transcription activators which are maximally expressed at the onset of nitrogen fixation in bacteroids. The members of this group belong to the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily.	3.4697e-125

>NZ_CP045216.1|WP_021507874.1|177081_177582_+|TIGR00645-family-protein
MERFTENLMYASRWLLAPVYIGLSLGLLALTVKFFQEIFHLLPNILSIAENDLILLLLSLVDMTLVGGLLVMVMLSGYENFVSKLDIDESKEKLSWLGKMDSGSLKNKVAASIVAISSIHLLRIFMDARNVANEKLMWYVIIHLTFVLSAFVMGWLDNMSKVEKKS
>NZ_CP045216.1|WP_058780224.1|174351_177027_+|two-component-system-sensor-histidine-kinase-KdbD
MNDELPRPDPDALLLNHSDSHRGKLKIYFGACAGVGKTYAMLQEAQRLRAQGLDVLAGVVETHGREETAALLQGLAVLARRATGRSRHAEFDLDAALARHPAVILMDELAHTNVQGSRHPKRWQDIEELLDAGIDVITTVNVQHLESLNDVVGGVTGIQVRETVPDPFFDSADEVVLVDLPPDDLRQRLKEGKVYVGDRAERAIENFFRKGNLFALRELALRRTADRVDDQMRAWRDQQGRDKVWHTRDAILLCIGDDTGSEKLVRTAARLAARLGSEWHAVYVETPRLNRLPEAQRRAILRTLQLAQELGAETATLSDPDEARAVLRYAREHNLGKIVTGRQPQRRWRRDSFAQRLGELGPELDLLVVALDEPVRDVPAALSGQRASGEKWRLHLRGCLMAIALCVLVTLIGRWWLVEFDTANAVMIYLLAVVLVALRFGRWPSVFATVINILAFDLVFVAPTGTVAVSDLQYLVTFAVMLAVGVIVGNLTAGVRYQARVARYREQRARHLYEMAKSLGSALTPQDIAATSQRVIEVTLQARSQLLLPDEQGELQSAGESTIGTPPDLGIAKWSYSKGQPAGAGTDTLPAVPYQILPLKSGAHCRGLLVVEPDNLRQLMIPEQQRLVETFTVLIANALERMALSHSEAASRLAAEREQLRNALLSALSHDLRTPLTVLFGQAEMLMLDLASEQSKYVGQANQIREQTLSTIRLVSNMLDMARIQSGGLNLREEWVALDEVIGGALSSMGPSLKGHDFTLDLPPELVLIKGDSAMLERVFTNLIENSLKYAGNAAQHGIRAWRDKTRLEIAVWDNGPGIAPENLTRIFDKFARGDKESAVPGVGLGLAISKTIIESHRGRIWAENRPQGGAVFRLSLPLPVAPEISEEALK
>NZ_CP045216.1|WP_021507876.1|173670_174243_+|potassium-transporting-ATPase-subunit-KdpC
MSQLRPAIVLLVLLTLLTGAVYPLLTTGLAQWWFPSQANGSLIERDGAVRGSEQIGQAFSQPGHFWGRPSATSDVPYNAQASGGSNLAASNPALDKAVAERVAALRAANPQAPAAVPVELVTASGSGLDPDISPEAALWQAPRVAAARNMTLKDVEALIARNTERPLLPFIGEETVNVLRLNMALDDLQG
>NZ_CP045216.1|WP_021507877.1|171610_173659_+|potassium-transporting-ATPase-subunit-KdpB
MSRQQLALFDAALTRTAMLDAVKKLDPRVQFRNPVMFLVWIGSVLTSLLAIGMAAGQLNGSAGFTAAVAIWLWFTVLFANFAEALAEGRSKAQANSLKGVNKHSDAKKLAEPFHGAQWRPVAADTLRKGDVVLVEAGDIIPCDGEVLEGGASVDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIQCSVNPGETFLDRMIAMVEGAKRRKTPNEIALTILLVSLTIVFLLATATLWPFSAWGGTPVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLMLDKTGTITLGNRQATQFLPAPGVSEQQLADAAQLASLADETPEGRSIVVLAKQKFNLRERDLSSMGASFIPFSAQTRMSGVNVQDRLIRKGAVDAVRRHIEASHGSFPAEVNARVEEVARAGGTPLVVAEGAQVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAVTYPQLNMLNVMALHSPASAILSAVIFNALVIVFLIPLALKGVSYRPMSAAALLRRNLWIYGVGGLVVPFIGIKAIDLLLTLSGLV
>NZ_CP045216.1|WP_152390339.1|169923_171603_+|potassium-transporting-ATPase-subunit-KdpA
MAANAFLLIACYLLVLMVLAQPLGRLLALMVADKPLLARSERVLWRLAGVDGAAMRWPHYLLAILLFNALGFVLLLAMLMGQGALPLNPQHLPGLSWDLALNTAISFVTNTNWQAYAGESTLSYFSQMAGLTVQNFLSAATGIAVAFALMRGFANRSLETLGNAWRDLTRITVYVLLPISLLMALFYVSQGSIQNFEPYHAFTTLEGAQQTLPLGPVASQEAIKTLGTNGGGFFNANSTHPFENPTALTNFVQMLSIFLIPAALCFAFGQQLGDRRQGHMLLWAMSIMFVLAVVAVMWAELRGNPHFLTLGADSAINMEGKETRFGILNSSLFAVITTAASCGAVNAMHDSFTALGGMVPMWLMQLGEVVFGGVGAGLYGMLLFVLLGVFIAGLMIGRTPEYMGKKIDVWEMKMTALAILVTPTLVLLGTALAIMTEAGRAGMANPGIHGFSEVLYAVSSAANNNGSAFAGLSANTPFWNLLLGFCMLVGRFGIIIPVLAIAGSLAAKKIQPVGNGTLPTHGPLFIALLVGTVLLVGALTFVPALALGPVAEHLQLIQG
>NZ_CP045216.1|WP_021507879.1|169834_169924_+|K(+)-transporting-ATPase-subunit-F
MSVGVIAGIVLVFLLLGYLIYALLNAEAF
>NZ_CP045216.1|WP_021507880.1|168562_169726_+|HD-GYP-domain-containing-protein
MIKLITVDELRPGMFIHKLEVWWIKDKRIRNQMLITDKRQIALIRNEGIQQVWIDPERSVRAPATPQPKKDIPQTPFFREMDQAQCIFNQGKPQVLAMFNEARMGQGLDLAFTLELVDEIAGSITREPTALLSVARLKNHDDYTYLHSMAVCGLMISLGKKMGLDEQQLRRVGMGGLLHDVGKAAVPLTILNKPDKLTDEEFTIMRQHPIVGAQMLMEAHADEDLLDIALHHHEKFDGSGYPHRLQGEEISLYARMAAVCDVYDAVTSDRPYRKGWTPAEAMHNMLSWRGHFDSALLHAFVRTIGIYPVGSLVRLASGRVALVVQAGEKSLLKPKVHVFWSLHSQREVKPEALDLGDSFCTDTITGAEDSGLWHNVDLNRIWALESA
>NZ_CP045216.1|WP_104094189.1|167026_168421_+|MFS-transporter
MLQRKNRSQNSHVRIWILCLILFLSVVAYADRSILSISGSAIKQEFGLSAIQLGLILSAFSWAYVIGQIPGGLILDRFGTKKVYGVTLALWSVSTLLMGFVGEFSSGMTMALTLMFALRFALGLIEAPSFPANARAVIMWFPGAERGRASSLFASAQYFAVAIFSPLSGWLVSRYGWEWPFFVLGGIGVLAVFVWAGYMRSPRQHPHVSASELHYIEQGGALVDIDAAQTLRARPPVSKAMFKTLLTNRMLWCAYLGQYCTIALSYFFITWFPIYLVQARGMNILDAGFATIAPALFGFLGGISGGYISDKLLARGWSLSWARKTPYIVGMLMAASLILAAVIPSNAGIIAIMSFAFFGKGVAAGAGTWTVVSDTAPKEAVGLAGAIFNGIGNMAGFITPLLFGVIVGLTGSYSIGLVFVGAHCVVAALLFLLVMGPIERVGDRHNAAVATEEKTAQKAGIKVA
>NZ_CP045216.1|WP_152390338.1|165675_166590_-|substrate-binding-domain-containing-protein
MKTLKAILLLGLLTSSASALAEKIGVSMAYFDQNFLTIIRHAIDKEAKARGLDAQFEDARGDVGRQTDQVQSFISAGVDAIIVDPVDSASTPQLTRLAQQAKIPLVYVNRTPGDKTLPPGVVFVGSDERESGTLQMEALAKLANYKGNVAIMIGNLTDAGALQRTKDVEQVVAKYPGMKVVQKQPANYARNEGMDLMLNWIGNGEAIDIVAANNDEMAIGAAMALAKSNKKILVGGIDATPDGLKALAQDKMQVTVFQDAIGQGKTSVDVAQKLIKVEKVASHVWIPFELVTKENMQKYVERSQ
>NZ_CP045216.1|WP_058759357.1|165211_165535_+|hypothetical-protein
MNRSNFNELGCFITIYFGQDYDLIDDSDEIEPKIDAFLRNEHPASWQGLAADIDLFLSESSDPETTFEAYFQDEFDPHLWGTTAVDFLHRVRTNLRKALAEQSDQLS
>NZ_CP045216.1|WP_152390340.1|177744_178674_-|LysR-family-transcriptional-regulator
MSTLTSVDRIELMQTFIRIVESGSLSAAAAQLGTTQPTVSRRLQALEQRLGLKLILRTTHALKLTDDGERCYAQARQLVATWHALEDELTGANDDPIGTLRVRAPHAFGQDQLIAPLMDYLQRYPRLAVEWMLNDRTPDFVSENVDCAIQVGAPTDPSVVAVLLAEVPRFVVAAPALLAAHAPVKEVTQLTQMPWLALTSFYRNEIALQRLSDGQPINLAIAPRLASDSLYAVRKAALAGMGAAIVSSWVVQEDLASGALVQLVPDWQAPPLPVWLTYPWASYYPARLQHFFAMIRDVMPQLTGTQPVR
>NZ_CP045216.1|WP_152390341.1|178767_179976_+|MFS-transporter
MSAMSQSSAMPAEKLPAPLVFTLAAGAGLSVASIYYSQPMLDIISKQFNVGIGSVGMVPMLTQAGYALGILLLAPLGDRHDRRTIILIKGLLLVAALLLCGFSGGINALLIASFVTGLTATVAQDIVPASAALAPERSRGKTVGTVMTGLLVGILLSRVVSGVVAEYLGWRTMYMMAAAAVLLSSLALWRALPRFTPGTTVSYPRLLLSLAHLWQHHQTLRRAALAQGLLSVSFSAFWSTLALMLSDRFHLDSAVAGAFGLAGAAGALAAPLAGSFADRIGPARVTQYGATLVMVSFALMFLLPVLSVPAQLGLIILSTIGFDLGVQATLVAHQTLVYSLAPEARSRLNALMFTVVFIGMATGAALGSLALAHFGWNGVVSLATAAAVLALLIRLASRHLQN
>NZ_CP045216.1|WP_021507871.1|180029_181379_+|sodium:proton-antiporter
MNFLAWTALTGGLLLLMSLASGWIHRGPVTSFGLYLFAGILCGPWMLNLLQIDIIGHAELAAHITEITMAASLFITGLKLRLPMSAHAWRVGLRLAFPAMLLTVGGMACLIHWITGFGWPLSLAFGAIVAPTDPVLASLISVNDARDDDALRVALSSEAGMNDGSALPLLMLALLLMHPGAFSLELLGGWAARDVVWAIGGGLAIGYLLGRLIGQLATHLRSAHHDVAPNDFLALALIALSYAAAQSVDASGFLATFAAGVGLRRAELRVTKRFPLEDLPEEKRYLPAEVLVNPNQRLKQGGGSPVKSVGLVVGDALSFGDTIERLLAAAMMVVLGITLAHHWNLTGIGLALLLFVVVRPLAVWLTTWRCEMPFMRRMLIGWLGIRGIGSINYIAYAWVHGLQGPQAEQMMDMALTLVVCSIVLHGITVTPLLNWRAARQAARTQQDET
>NZ_CP045216.1|WP_021507870.1|181405_181753_+|hypothetical-protein
MKALLIALVGLSLSASALADDTDADAQENIYASQLCHIVSGEQKTGDMQSYTEKMKSQLAASQSPSAMNKPSFNEETAQEVVNGWLELGEEERAKLRHDQQQCEQTVMTQFQQQD
>NZ_CP045216.1|WP_058759350.1|181914_182811_+|alpha/beta-hydrolase
MITRRRFLLASGATVLSMTAGKLFARDDIIPLWPDDPPGGGGPSGLLKVSANGSWTNIVSPAIQRFRPENPNGEAVIVAAGGGYRFIGMGREAWPVARWLNANGYTAYVLSYRLPGEKWQAGRLAPLQDAQRAIRMVRAMENKVHLLGFSAGGHLLGMAAARPDFVTYSPQDSLDDIRPTADSVGLIYPVITLEAPYQHTRTHQMIVGNDATPTQEANWSVQNYVTRAYPPTFLAQAEDDHTSNPHNTELMRDACRRMRVPVELIELSSGGHGFGLGKAGTPAALWDQAYVRWLDKLG
>NZ_CP045216.1|WP_064511431.1|183162_184314_+|DDE-type-integrase/transposase/recombinase
MPWTETVTMQRLEFILACQAGGESMTQLCHRHGISRKTGYKWLSRFNPGELSSLENLSRARHLQPDKIAPDITARLVQFRQQHPDWGPKKIRHWFLSNGADFSVPAASTIGDLLKAAGMVQPRTPRKRTPGNLRSLTTPVRNNHVWSADFKGRFRLKDGSWCRPFTLTDNHSRYLLSCEPGTSETTVFVRGCMERAFLEGGLPDVIRTDNGSPFVAPGILALTQLSVWLIKLGIQPERTAPGCPGQNARHERMHRSLKVAMSHHDVFGSLPEQQAWCSGWRNEFNQEKPHEAHGQQPPAKIWTPSPRRWDGKVPEVGYPEGAKLYKVGEKGDLRLNGRTFLSAALRGEYVRFLEVDDGIDVILFDRLILAYYDRAEKRIIRID
>NZ_CP045216.1|WP_059012349.1|184390_185308_-|bestrophin
MIVRPHQHWFLRLFDWHGSVLSRIAFRLSLNLLMSVIAILGYPWYSTLGIHLTTAPFSLIGVSIAIFLGFRNNASYARFIEARTLWGNMHITQRSLLRQVKTLRGLRVEQVQEFIGLQLAFSWSLKHRLRKTDAQADLQRLLPPAWHAAVLGHPMPTSQIMLCMGEWLAQRRDEGLVTDIVWQSIDDNLNHLSAYLGGCDRLASTPIPFAYSLILHRTVYLFCTLLPFALVADLHLMTPLVSVFISYTFLSLESLAEELEDPFGTAPNHLPLDALCVNIERNLKAMNNDFPLPAASQPDRYFNLT
>NZ_CP045216.1|WP_021508093.1|185561_186203_+|hydrolase
MSKLDLLDPQNSTLIFIDHQPQMAFGVANIDRQQLKNNTVALAKAGKIFDVPVIYTSVETESFSGYIWPELLAVHPESKPIERTSMNSWEDAKFVEAVEKTGRKKLIISALWTEVCLTFPALMALKAGYEVYVVTDTSGGTSVDAHERSVQRMVQAGAVPVTWQQVLLEYQRDWSRKETYDAVMDLVREHSGAYGMGVDYAYTMVHKAPQRQG
>NZ_CP045216.1|WP_152390342.1|186204_187107_-|LysR-family-transcriptional-regulator
MKRPSWHELQAIKTLGEQRSFRRAAELLGLKRSSLSHLVKTLEHNLGVQLFQRTTRSVSLTDAGEQLLQRLAPLLNQMDEVLHEVSLSRQQQYGTLRISASDVVIGLLLDQVVPEFSARYPGIQLDFSAQGALVDITAAGFDAGIRLIEDVPQDMVAIALGGPLTFVTVASPDYLAVHAPVRQPQDLLQQQCIRHRLPGGKRYRWEYQSAEESLEIDVPGTLTLDNNALMARAAINGSGIAFVPSLYVSEALQQGKLVELLADWRIQSAGIALWFPPNRHQSMALRLFIDALKTRLPHYR
>NZ_CP045216.1|WP_152390343.1|187202_188024_+|SDR-family-oxidoreductase
MKTWLITGASSGLGRLMSERLLERGDRVVATVRREQALADLQQQYGDRLLVMRLDLAETASIAPAIASAFARVGRIDVVVSNAAYGLFGAAEELSDAQIARQIATNLTGSIQLIRAVIPHLRQQGGGRIAQISSEGGQVAYPNFSLYHASKWGIEGFVEAVRQEVASFGIELLLVEPGPTVTNFASGLDIAAPLDAYRDNASGQFRRAIEAGDFAILGDAGKCVAATLATLDQETMPLRLALGSTAYQHIEAALEARLAELRTQKALAFGADA

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Crispr_ID: NZ_CP045216_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_2

182903-183039

Orphan

Consensus_repeat	Method
TCGCCAGGTCACCGTTTTTTGGGTCGCCATGAATGGCGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_2

>merge|NZ_CP045216|2|182903-183039|CRISPRCasFinder
TCGCCAGGTCACCGTTTTTTGGGTCGCCATGAATGGCGCCCCTGCAGCAGTATGATGCGCTATTTTGTAGGGGGCGCATTCATGCGCACCTGGATGCTCGCCAGGTCACCGTTTTTTGGTCGCCATGAATGGCGCCC

>NZ_CP045216|2|2|182903-183039|CRISPRCasFinder
TCGCCAGGTCACCGTTTTTTGGGTCGCCATGAATGGCGCCC	CTGCAGCAGTATGATGCGCTATTTTGTAGGGGGCGCATTCATGCGCACCTGGATG
CTCGCCAGGTCACCGTTTTTTGGTCGCCATGAATGGCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_152390343.1\|187202_188024_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235813
NZ_CP045216.1\|WP_059012349.1\|184390_185308_-\|bestrophin	unknown	unknown	gnl\|CDD\|226304
NZ_CP045216.1\|WP_031279810.1\|188993_189926_-\|nucleoside-recognition-family-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_058780224.1\|174351_177027_+\|two-component-system-sensor-histidine-kinase-KdbD	unknown	unknown	gnl\|CDD\|236701
NZ_CP045216.1\|WP_021507871.1\|180029_181379_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP045216.1\|WP_059012346.1\|188119_188923_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100053
NZ_CP045216.1\|WP_021507876.1\|173670_174243_+\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|234724
NZ_CP045216.1\|WP_152390341.1\|178767_179976_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP045216.1\|WP_152390339.1\|169923_171603_+\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|235494
NZ_CP045216.1\|WP_152390342.1\|186204_187107_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP045216.1\|WP_021507870.1\|181405_181753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_152390344.1\|192465_193308_-\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	unknown	unknown	gnl\|CDD\|225509
NZ_CP045216.1\|WP_021507877.1\|171610_173659_+\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP045216.1\|WP_064511431.1\|183162_184314_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP045216.1\|WP_021508093.1\|185561_186203_+\|hydrolase	unknown	unknown	gnl\|CDD\|238494
NZ_CP045216.1\|WP_058759350.1\|181914_182811_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP045216.1\|WP_021507874.1\|177081_177582_+\|TIGR00645-family-protein	unknown	unknown	gnl\|CDD\|179964
NZ_CP045216.1\|WP_058780218.1\|190067_191420_-\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|235701
NZ_CP045216.1\|WP_059012345.1\|191550_192462_+\|ribonuclease-Z	unknown	unknown	gnl\|CDD\|131697
NZ_CP045216.1\|WP_152390340.1\|177744_178674_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_152390343.1\|187202_188024_+\|SDR-family-oxidoreductase	gnl\|CDD\|235813	PRK06482, PRK06482, SDR family oxidoreductase.	7.01487e-144
NZ_CP045216.1\|WP_059012349.1\|184390_185308_-\|bestrophin	gnl\|CDD\|226304	COG3781, COG3781, Predicted membrane protein [Function unknown].	5.42946e-119
NZ_CP045216.1\|WP_058780224.1\|174351_177027_+\|two-component-system-sensor-histidine-kinase-KdbD	gnl\|CDD\|236701	PRK10490, PRK10490, sensor protein KdpD; Provisional.	0
NZ_CP045216.1\|WP_021507871.1\|180029_181379_+\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	4.51659e-45
NZ_CP045216.1\|WP_059012346.1\|188119_188923_-\|hypothetical-protein	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	6.4573e-17
NZ_CP045216.1\|WP_021507876.1\|173670_174243_+\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|234724	PRK00315, PRK00315, potassium-transporting ATPase subunit KdpC.	3.65513e-107
NZ_CP045216.1\|WP_152390341.1\|178767_179976_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.44147e-55
NZ_CP045216.1\|WP_152390339.1\|169923_171603_+\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|235494	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional.	0
NZ_CP045216.1\|WP_152390342.1\|186204_187107_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.06571e-86
NZ_CP045216.1\|WP_152390344.1\|192465_193308_-\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	gnl\|CDD\|225509	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only].	1.33359e-169
NZ_CP045216.1\|WP_021507877.1\|171610_173659_+\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP045216.1\|WP_064511431.1\|183162_184314_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.64496e-21
NZ_CP045216.1\|WP_021508093.1\|185561_186203_+\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.5817e-69
NZ_CP045216.1\|WP_058759350.1\|181914_182811_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	3.99396e-14
NZ_CP045216.1\|WP_021507874.1\|177081_177582_+\|TIGR00645-family-protein	gnl\|CDD\|179964	PRK05208, PRK05208, hypothetical protein; Provisional.	8.52212e-86
NZ_CP045216.1\|WP_058780218.1\|190067_191420_-\|glutathione-disulfide-reductase	gnl\|CDD\|235701	PRK06116, PRK06116, glutathione reductase; Validated.	0
NZ_CP045216.1\|WP_059012345.1\|191550_192462_+\|ribonuclease-Z	gnl\|CDD\|131697	TIGR02649, Ribonuclease_BN, ribonuclease BN. Members of this protein family are ribonuclease BN of Escherichia coli K-12 and closely related proteins believed to be equivalent in function. Note that E. coli appears to lack RNase Z per se, and this protein of E. coli appears orthologous to (but not functionally equivalent to) RNase Z of Bacillus subtilis and various other species. Meanwhile, the yihY gene product of E. coli previously was incorrectly identified as RNase BN. [Transcription, RNA processing].	2.96006e-145
NZ_CP045216.1\|WP_152390340.1\|177744_178674_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.78977e-57

>NZ_CP045216.1|WP_058759350.1|181914_182811_+|alpha/beta-hydrolase
MITRRRFLLASGATVLSMTAGKLFARDDIIPLWPDDPPGGGGPSGLLKVSANGSWTNIVSPAIQRFRPENPNGEAVIVAAGGGYRFIGMGREAWPVARWLNANGYTAYVLSYRLPGEKWQAGRLAPLQDAQRAIRMVRAMENKVHLLGFSAGGHLLGMAAARPDFVTYSPQDSLDDIRPTADSVGLIYPVITLEAPYQHTRTHQMIVGNDATPTQEANWSVQNYVTRAYPPTFLAQAEDDHTSNPHNTELMRDACRRMRVPVELIELSSGGHGFGLGKAGTPAALWDQAYVRWLDKLG
>NZ_CP045216.1|WP_021507870.1|181405_181753_+|hypothetical-protein
MKALLIALVGLSLSASALADDTDADAQENIYASQLCHIVSGEQKTGDMQSYTEKMKSQLAASQSPSAMNKPSFNEETAQEVVNGWLELGEEERAKLRHDQQQCEQTVMTQFQQQD
>NZ_CP045216.1|WP_021507871.1|180029_181379_+|sodium:proton-antiporter
MNFLAWTALTGGLLLLMSLASGWIHRGPVTSFGLYLFAGILCGPWMLNLLQIDIIGHAELAAHITEITMAASLFITGLKLRLPMSAHAWRVGLRLAFPAMLLTVGGMACLIHWITGFGWPLSLAFGAIVAPTDPVLASLISVNDARDDDALRVALSSEAGMNDGSALPLLMLALLLMHPGAFSLELLGGWAARDVVWAIGGGLAIGYLLGRLIGQLATHLRSAHHDVAPNDFLALALIALSYAAAQSVDASGFLATFAAGVGLRRAELRVTKRFPLEDLPEEKRYLPAEVLVNPNQRLKQGGGSPVKSVGLVVGDALSFGDTIERLLAAAMMVVLGITLAHHWNLTGIGLALLLFVVVRPLAVWLTTWRCEMPFMRRMLIGWLGIRGIGSINYIAYAWVHGLQGPQAEQMMDMALTLVVCSIVLHGITVTPLLNWRAARQAARTQQDET
>NZ_CP045216.1|WP_152390341.1|178767_179976_+|MFS-transporter
MSAMSQSSAMPAEKLPAPLVFTLAAGAGLSVASIYYSQPMLDIISKQFNVGIGSVGMVPMLTQAGYALGILLLAPLGDRHDRRTIILIKGLLLVAALLLCGFSGGINALLIASFVTGLTATVAQDIVPASAALAPERSRGKTVGTVMTGLLVGILLSRVVSGVVAEYLGWRTMYMMAAAAVLLSSLALWRALPRFTPGTTVSYPRLLLSLAHLWQHHQTLRRAALAQGLLSVSFSAFWSTLALMLSDRFHLDSAVAGAFGLAGAAGALAAPLAGSFADRIGPARVTQYGATLVMVSFALMFLLPVLSVPAQLGLIILSTIGFDLGVQATLVAHQTLVYSLAPEARSRLNALMFTVVFIGMATGAALGSLALAHFGWNGVVSLATAAAVLALLIRLASRHLQN
>NZ_CP045216.1|WP_152390340.1|177744_178674_-|LysR-family-transcriptional-regulator
MSTLTSVDRIELMQTFIRIVESGSLSAAAAQLGTTQPTVSRRLQALEQRLGLKLILRTTHALKLTDDGERCYAQARQLVATWHALEDELTGANDDPIGTLRVRAPHAFGQDQLIAPLMDYLQRYPRLAVEWMLNDRTPDFVSENVDCAIQVGAPTDPSVVAVLLAEVPRFVVAAPALLAAHAPVKEVTQLTQMPWLALTSFYRNEIALQRLSDGQPINLAIAPRLASDSLYAVRKAALAGMGAAIVSSWVVQEDLASGALVQLVPDWQAPPLPVWLTYPWASYYPARLQHFFAMIRDVMPQLTGTQPVR
>NZ_CP045216.1|WP_021507874.1|177081_177582_+|TIGR00645-family-protein
MERFTENLMYASRWLLAPVYIGLSLGLLALTVKFFQEIFHLLPNILSIAENDLILLLLSLVDMTLVGGLLVMVMLSGYENFVSKLDIDESKEKLSWLGKMDSGSLKNKVAASIVAISSIHLLRIFMDARNVANEKLMWYVIIHLTFVLSAFVMGWLDNMSKVEKKS
>NZ_CP045216.1|WP_058780224.1|174351_177027_+|two-component-system-sensor-histidine-kinase-KdbD
MNDELPRPDPDALLLNHSDSHRGKLKIYFGACAGVGKTYAMLQEAQRLRAQGLDVLAGVVETHGREETAALLQGLAVLARRATGRSRHAEFDLDAALARHPAVILMDELAHTNVQGSRHPKRWQDIEELLDAGIDVITTVNVQHLESLNDVVGGVTGIQVRETVPDPFFDSADEVVLVDLPPDDLRQRLKEGKVYVGDRAERAIENFFRKGNLFALRELALRRTADRVDDQMRAWRDQQGRDKVWHTRDAILLCIGDDTGSEKLVRTAARLAARLGSEWHAVYVETPRLNRLPEAQRRAILRTLQLAQELGAETATLSDPDEARAVLRYAREHNLGKIVTGRQPQRRWRRDSFAQRLGELGPELDLLVVALDEPVRDVPAALSGQRASGEKWRLHLRGCLMAIALCVLVTLIGRWWLVEFDTANAVMIYLLAVVLVALRFGRWPSVFATVINILAFDLVFVAPTGTVAVSDLQYLVTFAVMLAVGVIVGNLTAGVRYQARVARYREQRARHLYEMAKSLGSALTPQDIAATSQRVIEVTLQARSQLLLPDEQGELQSAGESTIGTPPDLGIAKWSYSKGQPAGAGTDTLPAVPYQILPLKSGAHCRGLLVVEPDNLRQLMIPEQQRLVETFTVLIANALERMALSHSEAASRLAAEREQLRNALLSALSHDLRTPLTVLFGQAEMLMLDLASEQSKYVGQANQIREQTLSTIRLVSNMLDMARIQSGGLNLREEWVALDEVIGGALSSMGPSLKGHDFTLDLPPELVLIKGDSAMLERVFTNLIENSLKYAGNAAQHGIRAWRDKTRLEIAVWDNGPGIAPENLTRIFDKFARGDKESAVPGVGLGLAISKTIIESHRGRIWAENRPQGGAVFRLSLPLPVAPEISEEALK
>NZ_CP045216.1|WP_021507876.1|173670_174243_+|potassium-transporting-ATPase-subunit-KdpC
MSQLRPAIVLLVLLTLLTGAVYPLLTTGLAQWWFPSQANGSLIERDGAVRGSEQIGQAFSQPGHFWGRPSATSDVPYNAQASGGSNLAASNPALDKAVAERVAALRAANPQAPAAVPVELVTASGSGLDPDISPEAALWQAPRVAAARNMTLKDVEALIARNTERPLLPFIGEETVNVLRLNMALDDLQG
>NZ_CP045216.1|WP_021507877.1|171610_173659_+|potassium-transporting-ATPase-subunit-KdpB
MSRQQLALFDAALTRTAMLDAVKKLDPRVQFRNPVMFLVWIGSVLTSLLAIGMAAGQLNGSAGFTAAVAIWLWFTVLFANFAEALAEGRSKAQANSLKGVNKHSDAKKLAEPFHGAQWRPVAADTLRKGDVVLVEAGDIIPCDGEVLEGGASVDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIQCSVNPGETFLDRMIAMVEGAKRRKTPNEIALTILLVSLTIVFLLATATLWPFSAWGGTPVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLMLDKTGTITLGNRQATQFLPAPGVSEQQLADAAQLASLADETPEGRSIVVLAKQKFNLRERDLSSMGASFIPFSAQTRMSGVNVQDRLIRKGAVDAVRRHIEASHGSFPAEVNARVEEVARAGGTPLVVAEGAQVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAVTYPQLNMLNVMALHSPASAILSAVIFNALVIVFLIPLALKGVSYRPMSAAALLRRNLWIYGVGGLVVPFIGIKAIDLLLTLSGLV
>NZ_CP045216.1|WP_152390339.1|169923_171603_+|potassium-transporting-ATPase-subunit-KdpA
MAANAFLLIACYLLVLMVLAQPLGRLLALMVADKPLLARSERVLWRLAGVDGAAMRWPHYLLAILLFNALGFVLLLAMLMGQGALPLNPQHLPGLSWDLALNTAISFVTNTNWQAYAGESTLSYFSQMAGLTVQNFLSAATGIAVAFALMRGFANRSLETLGNAWRDLTRITVYVLLPISLLMALFYVSQGSIQNFEPYHAFTTLEGAQQTLPLGPVASQEAIKTLGTNGGGFFNANSTHPFENPTALTNFVQMLSIFLIPAALCFAFGQQLGDRRQGHMLLWAMSIMFVLAVVAVMWAELRGNPHFLTLGADSAINMEGKETRFGILNSSLFAVITTAASCGAVNAMHDSFTALGGMVPMWLMQLGEVVFGGVGAGLYGMLLFVLLGVFIAGLMIGRTPEYMGKKIDVWEMKMTALAILVTPTLVLLGTALAIMTEAGRAGMANPGIHGFSEVLYAVSSAANNNGSAFAGLSANTPFWNLLLGFCMLVGRFGIIIPVLAIAGSLAAKKIQPVGNGTLPTHGPLFIALLVGTVLLVGALTFVPALALGPVAEHLQLIQG
>NZ_CP045216.1|WP_064511431.1|183162_184314_+|DDE-type-integrase/transposase/recombinase
MPWTETVTMQRLEFILACQAGGESMTQLCHRHGISRKTGYKWLSRFNPGELSSLENLSRARHLQPDKIAPDITARLVQFRQQHPDWGPKKIRHWFLSNGADFSVPAASTIGDLLKAAGMVQPRTPRKRTPGNLRSLTTPVRNNHVWSADFKGRFRLKDGSWCRPFTLTDNHSRYLLSCEPGTSETTVFVRGCMERAFLEGGLPDVIRTDNGSPFVAPGILALTQLSVWLIKLGIQPERTAPGCPGQNARHERMHRSLKVAMSHHDVFGSLPEQQAWCSGWRNEFNQEKPHEAHGQQPPAKIWTPSPRRWDGKVPEVGYPEGAKLYKVGEKGDLRLNGRTFLSAALRGEYVRFLEVDDGIDVILFDRLILAYYDRAEKRIIRID
>NZ_CP045216.1|WP_059012349.1|184390_185308_-|bestrophin
MIVRPHQHWFLRLFDWHGSVLSRIAFRLSLNLLMSVIAILGYPWYSTLGIHLTTAPFSLIGVSIAIFLGFRNNASYARFIEARTLWGNMHITQRSLLRQVKTLRGLRVEQVQEFIGLQLAFSWSLKHRLRKTDAQADLQRLLPPAWHAAVLGHPMPTSQIMLCMGEWLAQRRDEGLVTDIVWQSIDDNLNHLSAYLGGCDRLASTPIPFAYSLILHRTVYLFCTLLPFALVADLHLMTPLVSVFISYTFLSLESLAEELEDPFGTAPNHLPLDALCVNIERNLKAMNNDFPLPAASQPDRYFNLT
>NZ_CP045216.1|WP_021508093.1|185561_186203_+|hydrolase
MSKLDLLDPQNSTLIFIDHQPQMAFGVANIDRQQLKNNTVALAKAGKIFDVPVIYTSVETESFSGYIWPELLAVHPESKPIERTSMNSWEDAKFVEAVEKTGRKKLIISALWTEVCLTFPALMALKAGYEVYVVTDTSGGTSVDAHERSVQRMVQAGAVPVTWQQVLLEYQRDWSRKETYDAVMDLVREHSGAYGMGVDYAYTMVHKAPQRQG
>NZ_CP045216.1|WP_152390342.1|186204_187107_-|LysR-family-transcriptional-regulator
MKRPSWHELQAIKTLGEQRSFRRAAELLGLKRSSLSHLVKTLEHNLGVQLFQRTTRSVSLTDAGEQLLQRLAPLLNQMDEVLHEVSLSRQQQYGTLRISASDVVIGLLLDQVVPEFSARYPGIQLDFSAQGALVDITAAGFDAGIRLIEDVPQDMVAIALGGPLTFVTVASPDYLAVHAPVRQPQDLLQQQCIRHRLPGGKRYRWEYQSAEESLEIDVPGTLTLDNNALMARAAINGSGIAFVPSLYVSEALQQGKLVELLADWRIQSAGIALWFPPNRHQSMALRLFIDALKTRLPHYR
>NZ_CP045216.1|WP_152390343.1|187202_188024_+|SDR-family-oxidoreductase
MKTWLITGASSGLGRLMSERLLERGDRVVATVRREQALADLQQQYGDRLLVMRLDLAETASIAPAIASAFARVGRIDVVVSNAAYGLFGAAEELSDAQIARQIATNLTGSIQLIRAVIPHLRQQGGGRIAQISSEGGQVAYPNFSLYHASKWGIEGFVEAVRQEVASFGIELLLVEPGPTVTNFASGLDIAAPLDAYRDNASGQFRRAIEAGDFAILGDAGKCVAATLATLDQETMPLRLALGSTAYQHIEAALEARLAELRTQKALAFGADA
>NZ_CP045216.1|WP_059012346.1|188119_188923_-|hypothetical-protein
MTILHPEQLRLIEGNKFLGKEPTLINSQINFHGKNNILICEEGVVLQDSVVDFRADNSIIYLSQSAIPYIVKIIAFSNSVCFIGRHNYFNEKLTLILSEEKNIIIGNHCCLSFGIWMRTADPHLIYNIADNQRINHSRSIYIGDHVWIGQNAMILKGSSIHSGSVIGAMSLVAGKTIHSNSCWGGNPVRMLKENIAWSGESVHHWTEATTRAWNMCDTEPMQFNHDDHVLNIAVIEQGFKNARNVVDKCQYLLKHIVKNENKNRFYG
>NZ_CP045216.1|WP_031279810.1|188993_189926_-|nucleoside-recognition-family-protein
MNIISIIMESGKAAVDVALYTLIPIMVVMLFIMKYLEVKGVLDFVVRHATPLLKPLGITGLALFALIQLNFVSFAAPLAALAIMEKRGTSDRHMAATLAMLFAMGQANAFYPLIPDGLNWSAALLFSISGGVLAAASTYHFFARKLSDVALRDEDQGVENSDTKPGLIAIINTSGADAIRLALGSLPMLILSLSVVGILKSAGAIELLTQLLAPLLHKLHIAEVYVLPALTKCLAGGTAYYGVVAGLVEQGQYSAHNINAAAGLLIQTFDLPGIGIFLGLSSRFPRLFRFAVPGILLGIALRATAHSLLF
>NZ_CP045216.1|WP_058780218.1|190067_191420_-|glutathione-disulfide-reductase
MTRHFDYLAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIAEAIHLYGPDYGFDTTVNRFDWSTLVKNRSAYIDRIHTSYDNVLGKNQVEVIKGFARFVDAHTVEVNGETITADHILIATGGRPSHPKVPGAEYGIDSDGFFELEALPKRVAVVGAGYIAVELAGVVNALGAETHLFVRQHAPLRSFDPLIVETLVEVMQAEGPTLHTESIPKAVIRNADGSLTLQLENGQQQTVDCLVWAIGREPATDNLNLAVTGVALNDKGYIQVDKFQNTNVKGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNVPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTQHRQPCRMKLVCVGPEEKIVGIHGIGNGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
>NZ_CP045216.1|WP_059012345.1|191550_192462_+|ribonuclease-Z
MHLTFLGTGAGAPSLQRNVTAIALTLSKRGETWLFDCGEATQHQFMRSALKPGKLEKIFITHLHGDHIFGLPGLLTSRSMAGLTEPMTLYGPKGLRQFVDTALSLSGSYTGYPLEIVEIEAGPVLDNGEFRVTAYALNHVVECYGYRIEQHDKPGFLDAPRLKAEGVPRGPWYQDLKQGKRITLEDGREINGADYLGPATKGKVLAIFGDTGPTEVALQLAANADVMVHETTLEAAMAEKANGRGHSTTVQAASVAQRAGAKRMIATHFSSRYLSQDRERLLAECQSVFPATELAHDFAIFEV
>NZ_CP045216.1|WP_152390344.1|192465_193308_-|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ
MLSYRHSFHAGNHADVLKHTVESLILTALMEKEKPFLYLDTHAGAGRYQLSGEHAERTGEYLEGIARIWQQPDAPALLKPYLAAIRNLNPTGTLRYYPGSPLIARYLLRDEDKLQLTELHPTDYPLLRSEFSKDARARVERADGYQQLKAKLPPPTRRGLILIDPPYEMKSDYQDVVKGIQEGHKRFATGVYALWYPVVLRQQIKHMLKDLEATGIRNILQIELAVRPDSDQRGMTASGMIVINPPWKLKAQMEELLPWLHQKLVPAGTGHYSVTQIVPE

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Crispr_ID: NZ_CP045216_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_3

684359-684448

Orphan

Consensus_repeat	Method
CCTGTCCGACCTGTCACGGTGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_3

>merge|NZ_CP045216|3|684359-684448|CRISPRCasFinder
CCTGTCCGACCTGTCACGGTGCGGGCCAGGTACAGATGCGTCAGGGCTTCTTTACCGTGCAGCAAGCCTGTCCGACCTGTCACGGTCGCG

>NZ_CP045216|3|3|684359-684448|CRISPRCasFinder
CCTGTCCGACCTGTCACGGTGCGG	GCCAGGTACAGATGCGTCAGGGCTTCTTTACCGTGCAGCAAG
CCTGTCCGACCTGTCACGGTCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_021508662.1\|681860_683771_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP045216.1\|WP_071813620.1\|671878_672013_+\|thr-operon-leader-peptide	unknown	unknown	unknown
NZ_CP045216.1\|WP_104188360.1\|678948_679536_+\|molybdopterin-adenylyltransferase	unknown	unknown	gnl\|CDD\|181837
NZ_CP045216.1\|WP_058757129.1\|679649_680960_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP045216.1\|WP_152390474.1\|692676_693456_+\|heme-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237422
NZ_CP045216.1\|WP_058757128.1\|681002_681563_-\|acetate-uptake-transporter	unknown	unknown	gnl\|CDD\|182625
NZ_CP045216.1\|WP_152390468.1\|675496_676780_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP045216.1\|WP_021506610.1\|686790_687078_-\|SelT/SelW/SelH-family-protein	unknown	unknown	gnl\|CDD\|226057
NZ_CP045216.1\|WP_021314062.1\|686245_686785_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP045216.1\|WP_021508654.1\|672098_674561_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	unknown	unknown	gnl\|CDD\|181856
NZ_CP045216.1\|WP_058757131.1\|677870_678824_+\|transaldolase	unknown	unknown	gnl\|CDD\|235381
NZ_CP045216.1\|WP_152390475.1\|695026_697174_+\|ornithine-decarboxylase	unknown	unknown	gnl\|CDD\|237434
NZ_CP045216.1\|WP_058757132.1\|676884_677658_-\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999
NZ_CP045216.1\|WP_152390470.1\|687420_689787_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273808
NZ_CP045216.1\|WP_031279903.1\|674563_675493_+\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NZ_CP045216.1\|WP_152390471.1\|689837_690869_+\|hemin-degrading-factor	unknown	unknown	gnl\|CDD\|226243
NZ_CP045216.1\|WP_152390472.1\|690865_691690_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238569
NZ_CP045216.1\|WP_058771523.1\|685386_686160_+\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|225250
NZ_CP045216.1\|WP_059011800.1\|693473_694466_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|176248
NZ_CP045216.1\|WP_152390473.1\|691682_692684_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|376439

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_021508662.1\|681860_683771_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP045216.1\|WP_021506610.1\|686790_687078_-\|SelT/SelW/SelH-family-protein	gnl\|CDD\|226057	COG3526, COG3526, Uncharacterized protein conserved in bacteria [Posttranslational modification, protein turnover, chaperones].	6.18013e-54
NZ_CP045216.1\|WP_104188360.1\|678948_679536_+\|molybdopterin-adenylyltransferase	gnl\|CDD\|181837	PRK09417, mogA, molybdenum cofactor biosynthesis protein MogA; Provisional.	4.57593e-138
NZ_CP045216.1\|WP_058757129.1\|679649_680960_+\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.06261e-88
NZ_CP045216.1\|WP_152390474.1\|692676_693456_+\|heme-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237422	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional.	1.56992e-132
NZ_CP045216.1\|WP_058757128.1\|681002_681563_-\|acetate-uptake-transporter	gnl\|CDD\|182625	PRK10659, PRK10659, acetate uptake transporter.	1.08234e-96
NZ_CP045216.1\|WP_152390468.1\|675496_676780_+\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP045216.1\|WP_152390471.1\|689837_690869_+\|hemin-degrading-factor	gnl\|CDD\|226243	COG3720, HemS, Putative heme degradation protein [Inorganic ion transport and metabolism].	6.50591e-150
NZ_CP045216.1\|WP_021314062.1\|686245_686785_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.71409e-15
NZ_CP045216.1\|WP_021508654.1\|672098_674561_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	gnl\|CDD\|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	0
NZ_CP045216.1\|WP_058757131.1\|677870_678824_+\|transaldolase	gnl\|CDD\|235381	PRK05269, PRK05269, transaldolase B; Provisional.	0
NZ_CP045216.1\|WP_152390475.1\|695026_697174_+\|ornithine-decarboxylase	gnl\|CDD\|237434	PRK13578, PRK13578, ornithine decarboxylase; Provisional.	0
NZ_CP045216.1\|WP_058757132.1\|676884_677658_-\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	6.29006e-148
NZ_CP045216.1\|WP_152390470.1\|687420_689787_+\|TonB-dependent-receptor	gnl\|CDD\|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.16319e-86
NZ_CP045216.1\|WP_031279903.1\|674563_675493_+\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	1.4811e-162
NZ_CP045216.1\|WP_152390472.1\|690865_691690_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238569	cd01149, HutB, Hemin binding protein HutB. These proteins have been shown to function as initial receptors in ABC transport of hemin and hemoproteins in many eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	1.17699e-79
NZ_CP045216.1\|WP_058771523.1\|685386_686160_+\|siderophore-interacting-protein	gnl\|CDD\|225250	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism].	1.55135e-56
NZ_CP045216.1\|WP_059011800.1\|693473_694466_-\|oxidoreductase	gnl\|CDD\|176248	cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_CP045216.1\|WP_152390473.1\|691682_692684_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.63674e-83

>NZ_CP045216.1|WP_021508662.1|681860_683771_+|molecular-chaperone-DnaK
MGKIIGIDLGTTNSCVAIMDGGKARVLENAEGDRTTPSIIAYTGDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDIKIMPYKIIGSDNGDAWLDVKGQKMAPPQISAEVLKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKGQGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVAEFKKDQGIDLHNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHLNIKVTRAKLESLVEDLVTRSIEPLKVALNDAGLSVSDINDVILVGGQTRMPMVQAKVAEFFGKEPRKDVNPDEAVAVGAAVQGGVLAGEVKDVLLLDVTPLSLGIETMGGVMTSLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRSADNKSLGQFNLDGIQPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIEKMVRDAEANAESDRKFEELVQTRNQGDQIAHSTRKQLDEAGDKLSAEDKAPIESALNELNTALKGEDKAEIEAKMQALMEVSSKLMELAQQQAQAGAADAGDASAKKDDDVVDAEFEEVKDKK
>NZ_CP045216.1|WP_058757128.1|681002_681563_-|acetate-uptake-transporter
MGNTTLANPAPLGLMGFGMTTILLNLHNTGLFEMDVIILAMGLFYGGIAQILAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLLPKMGLAAAADGHFLGAYLALWGLFTLFLFFGTLRAAKVLQFVFASLTLLFALLAIGHLLDHAALLRIAGWVGIVCGASAFYLAMGEVLNEKFERSVLPIGE
>NZ_CP045216.1|WP_058757129.1|679649_680960_+|MFS-transporter
MDSLTTRRLNRQDYKTLALAALGGALEFYDFIIFVFFAAVIGELFFPPDIPEWLRQVQTFAIFAAGYLARPLGGIIMAHFGDKVGRKKMFSLSILLMALPTLAMGALPTYASIGIAAPLLMLLMRVLQGAAIGGEVPGAWVFVAEHVPEKRIGFACGTLTAGLTAGILLGSLVATVLNTSLSPAAIRDHGWRIPFFLGGLFGLLAMYLRRWLHETPVFRQMQQRKALAEKLPLQTILASHKRGIAVSMLLTWLLSACIVVVILMAPTLMQKQHGVPAALSLQANSFATVMLLIGCVLAGWIVDRYGAARTLLIGSLLLALCSWSFFQQLGGTPQMLFIWYGLAGLSVGVVGVVPFVMVRAFPAAVRFTGISFSYNVSYAIFGGLTPISVTLMMSLTPMAPAWYVLALALIGMLVALWLWHDSRQANAQLDVSLHSS
>NZ_CP045216.1|WP_104188360.1|678948_679536_+|molybdopterin-adenylyltransferase
MDTLRIGLISVSDRAANGIYQDQGIPALESWLSAALATPFEIETRLVPDEQPMIEQAICELVDERFCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLQFVPTAILSRQVGVIRKQSLILNLPGQPKSIKETLEGLKADDGTVKVPGIFAAVPYCLQLLEGPYVETYPEVVAAFRPKSARRETNV
>NZ_CP045216.1|WP_058757131.1|677870_678824_+|transaldolase
MTDKLTSLRQLTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDEAISWARQQSSNKEEQLALVSDKLAVNIGLEILKLIPGRISTEVDARLSYDTEASIAKARSLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKQNTDKKEYAAHEDPGVVSVSEIYNYYKQHGYETVVMGASFRNVGEIIELAGCDRLTISPGLLKELAESEGSVERKLSYSGEVKARPAKMTEAEFLWQHNQDPMAVTKLAEGIRNFAIDQGKLEKMIAELL
>NZ_CP045216.1|WP_058757132.1|676884_677658_-|peroxide-stress-protein-YaaA
MLMVISPAKTLDYESPLATSRFTQPALLEKSQQLIDVARDLSPAQIASLMGISDKLAHLNADRFSQWQPPFSPDNARQAILAFKGDVYTGLQAETFSEADFDFAQKHLRMLSGLYGLLRPLDLMQPYRLEMGIKLANPAGKDLYSFWGDLLTQKLNDALAEQGDDVLINLASDEYFKAIKPKQLNAELVKPVFLDEKNGKFKVISFYAKKARGLMSRYVIEKRLTKPTQLKKFDVDGYFFDAAESKGNELVFKRREQ
>NZ_CP045216.1|WP_152390468.1|675496_676780_+|threonine-synthase
MKLYNLKDHNEQVSFAQAVKQGLGSQQGLFFPLELPEFELTDIDAMLEMDFVSRSSKILSAYIGDEIAAHQLAERVKNAFAFPAPVSQVSDDVACLELFHGPTLAFKDFGGRFMAQMLSYVSGADEQITILTATSGDTGAAVAHAFYGMENVRVVIFYPQGKISPLQEKLFCTLGGNIETIAIDGDFDACQALVKQAFDDEELKKAIGLNSANSINISRLLAQICYYFEAVAQLPQEKRNQLVVSVPSGNFGDLTAGLLAKSLGLPIKRFIAATNANDTVPRFLADGQWQPNATVATLSNAMDVSQPNNWPRVEELFRRKTWRLTDLAYGAVSDETTKATMRELAELGYLSEPHAAIAYRLLRDQLQEGEFGLFLGTAHPAKFKESVEEILGQPLPLPEALAARADLPLLSHAMKADFAALRVFLLK
>NZ_CP045216.1|WP_031279903.1|674563_675493_+|homoserine-kinase
MVKIYAPASIGNVSVGFDVLGAAVSPVDGSLLGDCVSVEAADQFSLQNKGRFVSKLPADPQDNIVYQCWQRFCQAIGKDVPVAMTLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLNDTELLALMGELEGRISGSVHYDNVAPCFLGGVQLMIEENGIISQEVPCFDDWLWVMAYPGIKVSTAEARAILPAQYRKQDAIKHGRLLAGFIHACHTRQPLLAAKLMQDVIAEPYRTKLLPGFAEARQAASDIGALACGISGSGPTLFAVCNEMATAQRMADWLSQHYLQNEEGFVHICRLDTAGARKLG
>NZ_CP045216.1|WP_021508654.1|672098_674561_+|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I
MRVLKFGGTSVANAERFLRVADILESNAQQGQVATVLSAPAKITNHLVAMIEKTISGQDALPNISDAERIFAELLQGLADAQPGFDYDGLKTRVELEFAQLKQVLHGISLLGQCPDAVNAAIICRGEKLSIAIMEALLQARGHKVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASQIPTDHMILMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTIAPIAQFQIPCLIKNTANPQAPGTLIGGEGEVDENPVKGITNLNNMAMFNVSGPGMKGMVGMAARVFAAMSRTGISVVLITQSSSEYSISFCVPQSEQARARRVLEEEFYLELKDGLLDPLDVLEQLAVISVVGDGMRTLRGISAKFFSALARANINIVAIAQGSSERSISVVVSNDDVTTGVRVVHQMLFATDQVIEVFVVGVGGVGGALLEQLHRQQAWLKGKHIDLRVCGIANSHALLTNVHGIDLSNWKAALAEAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLAEGFHVVTPNKKANTSSWNYYQQMRAAAAKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELIKFSGILSGSLSFIFGKLDEGVTLSEATRMARELGFTEPDPRDDLSGTDVARKLLILAREAGHQLELSDIDIEPLLPASLTDIADVDQFMARLPELDNAFAARVAKARDEGKVLRFVGAIEEGGACKVKIDAVDGNDPLYKVKNGENALAFYSRYYQPIPLVLRGYGAGNDVTAAGVFADLLRTLTWKLGV
>NZ_CP045216.1|WP_071813620.1|671878_672013_+|thr-operon-leader-peptide
MRFALLLEGRRTRQRQTEKISMRNHSLNTTIIITTTITTGNGAG
>NZ_CP045216.1|WP_058771523.1|685386_686160_+|siderophore-interacting-protein
MPNPTHHRAPQRVRNELRFRHITVASKTRVADAFWRIVFSGSDLAGFHSPSFDDHIKVFFPDTPGGALALPHMTDEGIVWPDGVRPAARDYTPLAFNGSDSLTLDFYIHDGGVASSWASAAQPGDRIAMGGPRGSCVVPVDYACQIYVCDETGLPAFKRRYQEMQAQQIHLLACVDESIGRAYLGDLPDVTVSWLGSGNMQAEALTPLLDPIMLPADDYFIWLTGEGAAVKQLSDYFTQQRAAHSDLVRAVAYWHQK
>NZ_CP045216.1|WP_021314062.1|686245_686785_+|PadR-family-transcriptional-regulator
MKQQRDVPEHADAAQRASCAGARRKRRERMLDASDIRLLMLHFLASGAAHGYELIKSVEELSKGEYSPSPGIIYPNLTLLEEMDAIRVVDAQATRKAYALNDAGRALLAENGENVAVIIGRLTSLAILVNNRSIPQVEQAIHTLRYTLNHRLSQEQISPATVEIVVAALQDAAEKIANS
>NZ_CP045216.1|WP_021506610.1|686790_687078_-|SelT/SelW/SelH-family-protein
MADKPAVTIHYCTQCNWLLRSAWMAQELLHTFAGDLSAVTLQPGSGGVFEISIDGQVIWERKQEGGFPDAAALKQRVRDVCWPDRELGHVDKKKP
>NZ_CP045216.1|WP_152390470.1|687420_689787_+|TonB-dependent-receptor
MSLHLQGNFRQRLFNVAVLASAIHAACSYAASDSSTLARSAENNSSNEPVMTVTAPKQQAGSKTTLTASDLQKRGANDFGSIMRYEPLVSATGAAGGSSAGKSGFDRAGYTGYNIRGLESNRVGLDIDGIPVPDATGRPYVSRAGNNTFGIGRDYIDPYMFGSVEIEKGATSVEQPNTAIGGNVSFHNKSPDDYLSSDKTHYFGYQSDYSSADRSWHNGITAAAGDDELRGLFVYSRRDGQQTRNNSGVKDAYPANWHSDAFMTSGIWQPNDQHKLSATFDYYHKTNHTHYDTWDSSSGNTIWGTAQQQSDSRRWGINLADEWTPYNEMIDTLTTRIYWQQTQAHDTTWLPTSASQYGFVYSDYNVDTLGFDTRASKTLGRHELSGGVNARVENSERPFRQEPNPGTFGTITQPQSDSRSWTVAGYLQDKINFDLDSHNFAVIPGVRVIHQSTKPKNLGDLTNGSTVLTEEQVEKLYGKTNSDTEVLPSLTFQYDINPALTTWLQYKRGVEFPTTSQLYGSWNLGSSYAGSAQYALIGNADLKTETSNNFEWGLKGQPTDGITLNTSVFYNTYKNFIAYTRYRRATNPAMFVNVPANIYTSYQAENRDKAYIYGAEISTRVNYGSWFPNVDGLSSTFALGYSEGKAKSRYLGDKYIDLDSVAPLKAIVGVAWDDKARGYGAALTATFVKGKQASATNRESYSNSGAAISDASSEYMRVPGYGLIDATAYWQLTKNVRLSGGVYNITDRKYWDYLSSRTLTSASAQERNDINLAVMPGRTWQLGVNVDF
>NZ_CP045216.1|WP_152390471.1|689837_690869_+|hemin-degrading-factor
MHQRYQHYLALKGQQPKMYARDLAALMGIGEAQLCEARVGHDAQPLRADFPALLTALAAVGEAKSITRNAWAVHEQLGTYSNLHLGEHGGLVLNPRALDQRLFPAQWHSAFFLHEQTAHGERQSIQIFDRHANAVLKIYTTAQTEMPAWQALIERFRLAHAPQLQPQPVSATPFSDRVDAGTVEAEWRAMTDVHQFFGLLKRHHLSRPQAFRAVPDDLARQVSNTALATLLAQVQQDGNEIMIFVGNRGCTQIFTGTIGKVVPLGNWINVFNPTFTLHLMADRIHESWVTRKPGGDGFVTSLELFAADGTQIAQLYGQRSEGTPEQARWREQVMALTPTGAAA
>NZ_CP045216.1|WP_152390472.1|690865_691690_+|ABC-transporter-substrate-binding-protein
MKALILTLLALLTLPAWAAQRIITIGGDVTQIVYALDAQAQLVARDSTSQHPAAATRLPDIGYMRQLNAEGILALKPTLVLASALAKPSLVLQQVADAGVTVVEVSGDNRLDAITDKIATIGNALQREQAARALIDKVNKQRAQLPQQPLPVKVLFIMAHGGLRTQAAGAQTGADGAIRAAGLVNAMGAVPHYQQLSQEGVVAAAPDLVVVGEEGLRTLGGEQAVWALPGLQLTPAGQHHALLVIDEMALLSFGLDTPGAILRLRHAAEAVQHD
>NZ_CP045216.1|WP_152390473.1|691682_692684_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MINRLMMRWLMLMSISMLVCMLLAANLGAMPLSLRTLWQAPLSDLAWQIWLTIRLPRVLLAVLTGMALAVSGAVMQGLFRNPLADPGLLGISSGAGLAVALSVVLPLSLPPLLALWLPSLAAFAGSLVVTLLIFSFSRLAQSQLARLLLVGIAINALCGAAVGVLSWLSNDQQLRQLSLWGMGSLTGAQWPSLLVCALLIVPALLLVQTRARRLNLLQLGEEDAHYMGVDVKRTQRQLLVLSALLVGTAVAVSGIIGFVGLVVPHVMRFCLGSDHRWLLPGAALAGAILLLLADTLARTVVIPAEMPVGLLTSLLGGPWFLWQILRQQRGLNE
>NZ_CP045216.1|WP_152390474.1|692676_693456_+|heme-ABC-transporter-ATP-binding-protein
MSEQLQARGLRFCRGTRTLIDDVSLTLPPGEMVALIGPNGAGKSTLLRLLTGFLHADAGECWLGDRPLAAWPREPLAQRRAVMRQQNSVTFPLPAADVVAMGRASWPAGNCQAVVQEVMQLTGSAPLAQRDYRSLSGGEQQRVQLARVLAQLWHDDGPRGWLLLDEPTSALDLYWQQSTLRLLHRLTRNGHFSVCAVLHDLNLASLWSDRVLLLHHGQLVAQGAPHAVMTEPILTRWYQADLQVVTPPAQDRPQIQLRP
>NZ_CP045216.1|WP_059011800.1|693473_694466_-|oxidoreductase
MFKALVIENDEQGYRTSLQDLSEQQLPDQDVTLEVSYSTLNYKDALAICNKGPIVRQFPMVPGIDFVGRVIHSRHPEWQQDDVALLTGWGVGEKHWGGLAQKASVSGDWLVKVPAALSPLQTMAIGTAGFTAMLCVLALEKQGITPQHGPVLVTGASGGVGSFSVSLLARLGYEVVASSGRASDSAYLLDTLGASAIIDRNELSAPGKPLAKERWAAAIDSVGSHTLANVLAGIQRDGVVAACGMAQGLDLPTSVAPFILRGVTLAGVDSVMCAKPLRQQAWQRLAELVDGALLEQMTKVIPLSEARAGAEQLLAGQVRGRLIVDCRQAP
>NZ_CP045216.1|WP_152390475.1|695026_697174_+|ornithine-decarboxylase
MNPLKIAASVAVAPSLSLNTARDVVTLDNTDFTDVAAVVVSLADTRSGVLTLLRQTGFNLPVFVANAFDDAVLTLPGVTEEINGAAEEWQALEQAAQAYEAELLPPFFDTLTRYVDMQNSTFACPGHQGGAFFRRHPAGRQFYEFYGENVFRSDMCNADVKLGDLLIHEGSAKDAQKYAARVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNPFGFIGGIDAHCFDETYLREQVRQVAPQRADQPRPFRLAIIQLGTYDGTVYNARQVVDRIGHLCDYILFDSAWLGYEQFIPLMAGCSPLTLELNENDPGIFVTQSVHKQLAGFSQTSQIHKKDNHIRGQKRFCPHKRLNNAFMLHASTSPFYPLFAALDINARMHQGEAGRSMWHDCVTLGIEARKAILERCSLIQPFLPEQVHGKPWQAAETATIAADPAYFSFEPGAKWHGFAGYDAGQYLVDPCKLLLTTPGIDATSGEYTRFGIPATILANYLRENGIVPEKCDLNSILFLLTPAETPEKMAHLVAMLEQFEQHVREDALLAEVLPSVYRRHVERYQGYTLRRLCQEMHDLYVSYDVKDLQRDMFRQACFPKVEVNPQDAHQAYIRGDVELVPIASAEGRIAAEGALPYPPGVLCVVPGETWGGAVQRYFLALEAGINLLPGFSPELQGVYTEEDDSGHKRLVANMML

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Crispr_ID: NZ_CP045216_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_4

789257-789390

Orphan

Consensus_repeat	Method
ACCCTCTCCCGCAAGCGGGCGAGGGGGCTGACCGCGCTCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_4

>merge|NZ_CP045216|4|789257-789390|CRISPRCasFinder
ACCCTCTCCCGCAAGCGGGCGAGGGGGCTGACCGCGCTCTCTGGAACGTCCCCTTTCCGCAAGGGCTGACCGCGCGCGCTGGCCCTCACCCCAACCCTCTCCCGCAAGCGGGCGAGGGGGCTGACCGCGCTCTC

>NZ_CP045216|4|4|789257-789390|CRISPRCasFinder
ACCCTCTCCCGCAAGCGGGCGAGGGGGCTGACCGCGCTCTC	TGGAACGTCCCCTTTCCGCAAGGGCTGACCGCGCGCGCTGGCCCTCACCCCA
ACCCTCTCCCGCAAGCGGGCGAGGGGGCTGACCGCGCTCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_152390499.1\|790670_792803_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239170
NZ_CP045216.1\|WP_058771565.1\|786489_787410_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236819
NZ_CP045216.1\|WP_152390504.1\|802741_804142_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP045216.1\|WP_152390502.1\|796490_799640_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|182501
NZ_CP045216.1\|WP_152390503.1\|799636_802738_+\|multidrug-transporter-subunit-MdtC	unknown	unknown	gnl\|CDD\|182589
NZ_CP045216.1\|WP_152390494.1\|776394_778122_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
NZ_CP045216.1\|WP_104093670.1\|781433_782532_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP045216.1\|WP_152390496.1\|782541_784062_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP045216.1\|WP_152390505.1\|804232_806383_+\|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase	unknown	unknown	gnl\|CDD\|181207
NZ_CP045216.1\|WP_152390497.1\|784311_784938_-\|serine-protease	unknown	unknown	unknown
NZ_CP045216.1\|WP_031279486.1\|789472_790474_-\|HTH-type-transcriptional-regulator-GalR	unknown	unknown	gnl\|CDD\|182681
NZ_CP045216.1\|WP_125309840.1\|781001_781067_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_152390498.1\|787520_788774_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|236867
NZ_CP045216.1\|WP_152390506.1\|807760_808801_-\|NADP(H)-dependent-aldo-keto-reductase	unknown	unknown	gnl\|CDD\|236727
NZ_CP045216.1\|WP_152390495.1\|778125_780882_-\|autotransporter-domain-containing-protein	unknown	unknown	gnl\|CDD\|173794
NZ_CP045216.1\|WP_152390501.1\|795288_796494_+\|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
NZ_CP045216.1\|WP_152390500.1\|793114_794845_+\|peptidoglycan-synthase	unknown	unknown	gnl\|CDD\|185060
NZ_CP045216.1\|WP_059012310.1\|806379_807570_+\|lysophospholipid-transporter-LplT	unknown	unknown	gnl\|CDD\|236879
NZ_CP045216.1\|WP_058771564.1\|785329_786493_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP045216.1\|WP_058757074.1\|788773_789226_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|173926

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_152390499.1\|790670_792803_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239170	cd02769, MopB_DMSOR-BSOR-TMAOR, The MopB_DMSOR-BSOR-TMAOR CD contains dimethylsulfoxide reductase (DMSOR), biotin sulfoxide reductase (BSOR), trimethylamine N-oxide reductase (TMAOR) and other related proteins. DMSOR always catalyzes the reduction of DMSO to dimethylsulfide, but its cellular location and oligomerization state are organism-dependent. For example, in Rhodobacter sphaeriodes and Rhodobacter capsulatus, it is an 82-kDa monomeric soluble protein found in the periplasmic space; in E. coli, it is membrane-bound and exists as a heterotrimer. BSOR catalyzes the reduction of biotin sulfixode to biotin, and is unique among Mo enzymes because no additional auxiliary proteins or cofactors are required. TMAOR is similar to DMSOR, but its only natural substrate is TMAO. Members of this CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP045216.1\|WP_058771565.1\|786489_787410_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|236819	PRK11013, PRK11013, DNA-binding transcriptional regulator LysR; Provisional.	0
NZ_CP045216.1\|WP_059012310.1\|806379_807570_+\|lysophospholipid-transporter-LplT	gnl\|CDD\|236879	PRK11195, PRK11195, lysophospholipid transporter LplT; Provisional.	0
NZ_CP045216.1\|WP_152390504.1\|802741_804142_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	8.11553e-101
NZ_CP045216.1\|WP_152390502.1\|796490_799640_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
NZ_CP045216.1\|WP_152390503.1\|799636_802738_+\|multidrug-transporter-subunit-MdtC	gnl\|CDD\|182589	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional.	0
NZ_CP045216.1\|WP_152390494.1\|776394_778122_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
NZ_CP045216.1\|WP_104093670.1\|781433_782532_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP045216.1\|WP_152390496.1\|782541_784062_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP045216.1\|WP_152390505.1\|804232_806383_+\|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase	gnl\|CDD\|181207	PRK08043, PRK08043, bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase.	0
NZ_CP045216.1\|WP_031279486.1\|789472_790474_-\|HTH-type-transcriptional-regulator-GalR	gnl\|CDD\|182681	PRK10727, PRK10727, HTH-type transcriptional regulator GalR.	0
NZ_CP045216.1\|WP_152390501.1\|795288_796494_+\|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	3.75386e-127
NZ_CP045216.1\|WP_152390498.1\|787520_788774_+\|diaminopimelate-decarboxylase	gnl\|CDD\|236867	PRK11165, PRK11165, diaminopimelate decarboxylase; Provisional.	0
NZ_CP045216.1\|WP_152390506.1\|807760_808801_-\|NADP(H)-dependent-aldo-keto-reductase	gnl\|CDD\|236727	PRK10625, tas, putative aldo-keto reductase; Provisional.	0
NZ_CP045216.1\|WP_152390495.1\|778125_780882_-\|autotransporter-domain-containing-protein	gnl\|CDD\|173794	cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases. Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.	1.39036e-45
NZ_CP045216.1\|WP_058757074.1\|788773_789226_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	3.50372e-12
NZ_CP045216.1\|WP_058771564.1\|785329_786493_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.65112e-106
NZ_CP045216.1\|WP_152390500.1\|793114_794845_+\|peptidoglycan-synthase	gnl\|CDD\|185060	PRK15105, PRK15105, peptidoglycan synthase FtsI; Provisional.	0

>NZ_CP045216.1|WP_058757074.1|788773_789226_+|GNAT-family-N-acetyltransferase
MRIVPLSSVPHHASQITDWLWQAFGDGTSRAFYDSIVRSSLNGAAFPVTFVALDDDDVPHGTVGFWRCDLISRQDLYPWVAALYVDEAARGQGLSAALQQHVLDYARQRGYATVWLWSTFGGYYERFGWQYQCDALEFPEVQVKVYSQDL
>NZ_CP045216.1|WP_152390498.1|787520_788774_+|diaminopimelate-decarboxylase
MPRPLNDSQTALNATNLLPMAQRYSGPFWAYDAEIIQQRIAQLSAFDVVRFAQKACSNIHILRLMRAAGVKVDSVSLGEIERALVAGFQPGGEDIVFTADVLDSPTLARIAELKVPVNAGSVDMLHQLGTVSPGHSVWLRINPGFGHGHSQKTNTGGENSKHGIWHSDLPLALAAIQQHGLQLVGLHMHIGSGVDYGHLQQVCDAMVDQVVAFGQDLQAISAGGGLSIPYRFGEEAIDTQHYYGLWNGARERIAAHLGHAVKLEIEPGRFLVAESGVLVSQVRAVKQMGSRHFVLVDAGFSDLMRPSMYGSYHHISLLPADGSAPGEAHVESVVAGPLCESGDVFTQLEGGKVETRALPAAQVGDYLVFHDTGAYGASMSSNYNSRPLIPEVLFEQGVPREIRRAQTIQELLALELN
>NZ_CP045216.1|WP_058771565.1|786489_787410_-|LysR-family-transcriptional-regulator
MAKINWRHIEIFHAVMTSGNLTQAATLLHTSQPTVSRELARLEQQLGLQLFERVRGRLQPTVQGLRLYEEVQRSWYGLDRIMDAAEGLRNFRQGELSIACLPVFSQSLLPPLLQPFLQRYPQVSLNIIPQESPLLEEWLSAQRYDLGLTETQHAPAGTERLALLTSDEVCVLPPQHPLCQRAVLTPQDFHGENYVSLSRSDSYRQLLDALFHEQQVERRLVLETHSAASVCAMVRAGVGISIVNPLTALDYADSGVVMRRFSIAVPFTVSLVRPQHRPASALVDHFCDHLQQQVATFPQRIARRLA
>NZ_CP045216.1|WP_058771564.1|785329_786493_+|MFS-transporter
MPVALLALALSAFAIGTTEFVIMGLLPEVAGDLQVSIPSAGWLISGYALGVAIGAPIMALLTAKLPRKRTLILLMIIFIIGNVLCALAYTYNLLMLARVITALCHGAFFGIGSVVAASLVAPSRQASAVALMFTGLTLANVLGVPLGTWFGQLFGWRATFWGVAIIGILAFIALIVSLPTNKDEKPVHLASEISALANGKLWLSLLMTVCFAAAMFALFSYIAPLLLQVTGISDRGVSWTLFLIGAGLTVGNIVGGKLADWKVSFSLILSFSLIAVFSLLFSWTSHALWLAEITLFLWAMATFATVPGLQINVVRHGKEAPNLVSTLNISAFNVGNALGAWVGGAVIDKGYGLTAVPVAAAALAAAGLVVCLLTFRKSGGQRETVRA
>NZ_CP045216.1|WP_152390497.1|784311_784938_-|serine-protease
MRWIIALTIGGLSGCSVGHYEYSSEAARRVDMTVTGIPTVLGMGALGTTIPLTREYSLTAAHVAKYSLYRVKAWHPECDIAVVYHANKEANLPPQFRNSHIGDNVNLYGYSFISALPVASSGKNLINTTLSNDWNKASCVVVAANAGVVKGMSGGAVYNASDDTLAGVIVGYSSRIDDNKSGKTLFKDVALYVPYARFQAWLDGVVKS
>NZ_CP045216.1|WP_152390496.1|782541_784062_+|lysine--tRNA-ligase
MSEQQPQSADAALELNNELKARREKLSALREKGVAFPNDFRRDTTSDRLHADYDSKENDELEALGVEVSVAGRMMTRRIMGKASFATLQDVGGQIQIYVSRDDLPEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHISELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDDSRKTFKIRSQIMAGIHQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGEHTFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIANALHIKVEKSWGLGRVVTEIFEETAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLVMLFTNSHTIRDVILFPALRPTGK
>NZ_CP045216.1|WP_104093670.1|781433_782532_+|peptide-chain-release-factor-2
MFEINPVKNRIQDLSERSSVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETLDQMQQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEENKSDIGWGSQIRSYVLDDSRIKDLRTSVETRNTQAVLDGDLDRFIEASLKAGL
>NZ_CP045216.1|WP_125309840.1|781001_781067_+|hypothetical-protein
MKHEPLRFRQGAERIRCALAG
>NZ_CP045216.1|WP_152390495.1|778125_780882_-|autotransporter-domain-containing-protein
MHYPVVTFRPSPRLLALIIPFLLSACGGGGGGGSGGGSTLTPVTPVVEPAVPATAASNKVGIIDSGLAPGRSGINYANVNFSSYVDSNTALNDNMGINGHGTLVAMTLLGLSPDSALYVAQASQNNIFNYDNTARAVQGLVAQGVRIFNMSYGSQERLTSQQALSDARQRYQSLYQGLNAVAAADGLAVMITGNNSGATPAPDVLTPLMYNDPQLARNLLAVTGIMDHTGYDLPGRAAGTGPFDACGAAAAWCLTAPGYTDYLYQNSDGSWVKVRSFGTSFAAPRVTAAASQLLQRFPWMSGHNLQQTLLTTATYRSDAHDNVADSANGRPYNETFGWGDLNAAKALNGPGQFWAEDFSARLDGGQYVFSNDISGDRGLVLDGSERGGTLQLTGNNSYQGLTQVSANSLLIDGAIAGNALVNGSGKLGGSGRIGGNLVNQGSVNGGLQVAGNYQQSADGTLNVTLNNPLRVTGNAALDGTLNLAPPSASYVVKQQETLLISGGGVSGQFSQVNTGVFLDGSVSYDAHSVTGQLTRKNTAAAAQAMGMDSASAQQTSRNLEQAFELADRWQGQATLSSAQQSALAAAGAFQTLADTRSAQAAINSLSGQAHASGNAVLFNALDYQTRLLNNRIDDASEQGRFGFWLESGQLRGSLDQDGYLGNRYRNTLTARGADSDFGLPGLRLGIAWTHTQLDATYDDTGGNSQNSLQGVMLYGRYAVTPAWYWQGNLSYQHGRDKLQRLVLLDEAAPVSSSARTDSWQAALQSGYRWTLQEDYRIEPYLGWRETGLQTGSFSDSGSAFGLQGDGDSYRRSVGYGGLNLSARQDWSAGWWSMLSLYGEYQYAFSNPSMDVSARWSGFGSGQQSFTIPGMQLDRRSQWFGARVDLVQSARARLFLRADRHVADRGDEKVLRGGVDVTF
>NZ_CP045216.1|WP_152390494.1|776394_778122_+|single-stranded-DNA-specific-exonuclease-RecJ
MHSVELRRREAKADAQLPDDLPPLLRRLYLQRGVKDAAELERGAKFLLPWQSLGGIERAVTLLHQMLQQQRRIVVVGDFDADGATSTALTVLALRSMGGNVDYLVPNRFEDGYGLSPEVVEQARARGAELILTVDNGISSHAGVDTAHQHGIPVLITDHHLPGETLPAAEAIVNPNLSDSAFPSRSLAGVGVAFYLMLALRAHLRQQNWFSDGRSEPNLAELLDLVALGTVADVVPLDANNRILVWQGLSRIRAGKCRAGIRALLEIANRDARQLAASDLGFAVGPRLNAAGRLDDMSVGVALLLTEDIAQARMLASELDALNQTRKEIEQGMKSEALALCDELERQHRDLPLGLAFYHPEWHQGVVGILASRLKERFHRPVIAFAPAGDGTLKGSGRSIAGLHLRDALERIDTLYPGLIIKFGGHAMAAGLSLEEAKYDEFRQRFAALIDEWLEGEALQGVMWSDGELHAQEFTLHTAEMLREAGPWGQAFPEPVFDGQFKLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNVDTSLWPDSSVRQVQLAYKLDINEYRGNRSVQLIIDHIWPQS
>NZ_CP045216.1|WP_031279486.1|789472_790474_-|HTH-type-transcriptional-regulator-GalR
MATIKDVARMAGVSVATVSRVINNSPKASESSRLAVTQAMEQLQYHPNANARALAQQSTETLGLVVGDVSDPFFGAMVKAVDEVAGQTGNFLLIGNGYHNEQKERQAIEQLMRHRCAALVVHAKKIPDDDLELLMKQVPGMVLLNRLLQGFESRCIALDDRYGAWLATRHLIQQGHTQIAFICSTHTISDAEDRLQGYYDALKEHGLPCNDRLVAWGEPDEVGGEQAMTELLGRGKQVSAVACYNDSMAAGALAVLSDNGIRVPEEMSLIGFDDVLVSRYVRPRLTTVRYPIVTMAQQAAQLALALANGTALPEVTNMFSPTLVRRHSVGGPG
>NZ_CP045216.1|WP_152390499.1|790670_792803_+|molybdopterin-dependent-oxidoreductase
MKTRVPHLAHWGAFTAVTENQCLIACEPFFADADPSPMIHTIPELVYSDKRIRQPMVRRSWLKSRENSDRTLRGREDFVAVDWDTALDLVAEENRRVRDRYGASGIFNGSYGWSSAGRVTDWPQVVEHAEIFVAFGGLALKNAQVASGGAGEHSLKPALQQLSAKGTPIINISPMRDDCPAFVNAEWIPIRPNTDVALMLALGYEITRRNAIDEAFLASHCTGWPQLRAYLLGESDGVAKTPAWASAITGIPAARIALLAQQLAGKRSFITCAYAVQRAHRGEQPYWMMIALSSMLGQPGLPGGGFSFGHGSMNSVGNPRQEGPAPLMSTGPNPANLSIPVARISDMLLNPGQPYAFQGETLHYPDIHLVHWAGGNPFHHHQQLNRLVEGWQRPDTVIVQDIVWTPAAQMADIVLPATTTLERNDIGGSSRDRFVLAMHQAIKPQHQARNDFDIFADLADRLGYRDRFTEGRNEMQWIEHLYQQCAQAHAQMDIAFPEFEAFWQRGFVEIPQGGKPYVFMDDFRADPQAHPIHTASGKIELFCQTIADYQLADFAGHPEWRAPQEWLGAALSAQFPLHMISVQPADRLHSQLDATATVQAGKTAGHETLYMHIDDAAARGISDGDEIEVSNARGRMLAGVRLTDGLTPGVVIIATGAWFDPGFGKAWQPWDRAGNPNVLTLDIGTSSLTQGPNAMSCLVEIKKHASCTIG
>NZ_CP045216.1|WP_152390500.1|793114_794845_+|peptidoglycan-synthase
MPPIKKFLGKDQIKAPFNPFRFRLICLGVLGCMGLLLARVGDLQLINHPMLEHEADQRSLRTVTLPTNRGTLLDRDGQALALSVPSRDIIADPLRVLEANPDFTSAKWSYLAAALNLRPDELRAQITANPKKRFLYLERKIELGIAKDIAELHLKGISSVYDDSRFYPMSEAAAPLIGIVGADNNGLNGLEKGFDRVLQGEPGKEVYRQDGDGNIIAMIDYEPPKQPPTVQLSIDKFDQFTLYSKLRDGVLLNKADSGAAVLVKIDTGEILAMASYPSFNPNNYDNATPAQMRNTAINDSYEPGSTVKPLVVMEGLQRHLVRPDSVIDTTPYSVNGHLIRDVGHWPRLTMTGILQKSSDIGVSHIALAMPAEALVNTYQAFGLGKPTGLGLTGESVGYFPLHRQRWADIERATFSFGYGLRVTPLQIAREYATLGSYGVYRPLSITKVTPPVLGRQVADPQIVQTVVHMLESDVLPGGTGVKAAVPGYRLATKTGTAEKMGSSGKYDGGYVNYTAGIAPASHPEVALVVMINHPTAGDHFGGSVAAPVFGNIMGPVLKHMNVAPDAIYSKPASDKS
>NZ_CP045216.1|WP_152390501.1|795288_796494_+|MdtA/MuxA-family-multidrug-efflux-RND-transporter-periplasmic-adaptor-subunit
MTIHAPRSGFSRWLKWLLVLLVLLIAAGVIWRVAGGKRGAAPGDLPPGGHRGAAPMSGPATLVHSGVAATADVPVYLNALGTVIPNASVTVTSRVAGQLQQVFFTEGQKVSAGQLLAQIDPRSYQATLAQYQGDLSQNQALLHSAQLTLARYKKLAAQDSLSRQDLDSQIATVGQYQGAVAADQAQIASAKLDIEYARITSPISGRVGLRLVDPGNMVQTSDTTGIVVVTQMQPAAVTFSVPQSYIAQLTRALRNGQSLPATAFDQDNSSILAQGEVKYISNQIDTSTGTIELKASFPNQDEALFANQFVNLRLQTGTLKNATVIPAQALQLSSDGSFVFIINKDNSVTRKAVTTGPALGEDRQAILQGVAPGDRLVTEGIDRLTNGSKVQLADDSKSTQP
>NZ_CP045216.1|WP_152390502.1|796490_799640_+|multidrug-efflux-RND-transporter-permease-subunit
MNPSRLFILRPVATILLMVGVLIAGLFAYRFLSTSALPQVDYPTIQVTTLYPGASPDVMASSVTSPLERQLGQMAGLSQMTSASSGGSSIITLKFSLDLSLDVAEQEVQAAINAANNLLPDDLPNPPTYKKVNPADSAVITLAASSDTLPLTEVQDLVNTRVALKLSQINGVGMVTLAGGNQPAIRVQMDPKALAAHKLSLEDVNTLIANSNVNGSKGGFDGKYHSVTIDANDQLRTAAEYGNLILTWQNGAALRLKDIAHIEQGPENRFQSAWANNRPAIVISVQRQPGANVIQVVDSIKKQLPVLQAALPDGVKMRVLADRTQTIRASISDVQFELMLSIALVVMVTFLFLRNVAATLIPSVAVPLSLIGTFGVMYLADFSLNNLSLMALTIATGFVIDDAIVVVENISRRLEQGETPMQAALKGSQQIGFTIISLTFSLIAVLIPLLFMGDVVGRLFREFAITLAVSILVSMVVSLTLTPMLCAWLLRHIPESQQSRFARKGGELFDKLVRGYDRLLSVVLNHQKLTLLVALATFALTALLYLAIPKGFFPTQDTGLIQGVTVASQDVSFTAMAQRQQALATVILQNPAVESVSSTIGIDGNNTSLNSGRLQINLKAFDQRDVKADEVIAQLQQAARQVAGIQLYLQPAQDLTVNDQVTPSQYQFTLDDADSENLVRWTPQLIAALQQRPEFNGVVSNLQDQGRVAYVELNRDQAARYGITAADVDTALYNSVGQRLVSTIFTQANQYRVVLEVAPQYQQSPASFDDVYLPVSSSASTSSDSDSETTTTGMVKLTAIASVHARTGALMHMRLNQFPAVMVSFNLNPGYSLEEGQRAIAQVTQQLKLPASITLRYQGETAAFQSATGNTLWLILAALITMYVVLGILYESFIHPVTILSTLPSAAVGALLTLMLAGSEFSLIALIGVILLIGIVKKNAIMMIDFALEAQHKQHMTPREAIHQACLLRFRPILMTTMAALLGALPLMLASGSGAELRQPLGLVIVGGLLVSQVLTLFSTPVIYLWFDGLAQRGKRYVQRRQQQARGEP
>NZ_CP045216.1|WP_152390503.1|799636_802738_+|multidrug-transporter-subunit-MdtC
MNITRLFIFRPVATLLLTLAILLLGALGYRLLPVAPLPQVDFPTIMVSASLAGASPETMAATVATPLERSLGQIAGVTEMTSTSSQGSTSVILQFELDRDINGAARDVQAAINAARSLLPSAMESLPTYRKANPSDAPIVMLALTSATRTPGELYDLAESKIEQAMGQVRGVGEVSLMGSALPAVRIDLQPQQLTHYGIALDTVRSAVASSTTNLPKGMLQGSSQSWMVDGNGQLDKAAQYRDLIVSYHAGKAVRLHDVATVYDSVEDQYQAGFLNSQPSVMIAIKRQAGANMLDTIDAIKAQLPQLEKDLPADTQLKVVVDRSPTVRASLYDTEETLLVAMLLVIAVVFVFLRNLQAVVIPALALPVSLIGTCAVMYLLGYSLDNLSLMALIIATGFVVDDAIVVLENITRHIEAGLSPLRAALRGAHEVSFTVLSMTVSLVAVFIPILLMGSIVGRLFREFAVTLTVSLLISMFVSLSLTPMLCARLLRPKPQVTRRPHPLYQLIENALNALLAAYARGLAWVMAHQKITLLSLLLTVLLNLFLFSVVQKGFFPNQDTGLLMGALRADQNISFQAMKPKMLAFTKIIEADPAVDSVMSSMGSGMFGSRNSANFFVRLKDFDQRSASATEVANRLSLKTRHIAGAQLFLMAAQDLHIGGRSANATYQYSLQADDLDLLRRWTPKVQAALAAIPQLNSVDSDAQTGGQEVVINIDRDRATRLGVNVQMLDTLLNNAFSQRQIATLYHTLNQYHVVMALQDSDTRNPAMLQQLYVINDSGDRVPLAAFARFSGGNAPLSVAHQGQSATSTIAFNLNDGVSLEQAQTLIKQAMAQLGLPSSIQAGFAGTAGAFSQLTATMPWLIIAALAAVYIVLGVLYESYIHPLTILSTLPSAGVGALLLLLLTNTQLTVIALIGIILLIGIVKKNAIMMIDFALHAERSQGLSPQQAITQACLMRFRPIMMTTLAAFFGALPLALGSGGDADLRSPLGIAIAGGLALSQLLTLFTTPVVYLWLDRLSRATQRQWRRVRHVES
>NZ_CP045216.1|WP_152390504.1|802741_804142_+|efflux-transporter-outer-membrane-subunit
MKMMNIGALTAALLVAGCSVGPDYQRPAMALPTHYKEAKGWTQATPQDASRKGEWWTVYHDATLSSLLRQVSISNQNVASYAAQYREALALSAQSRAALFPSLDYDASSTRSGSRASTSGQRSVSNSHSATLNASWELDLWGKLRRTQEEDKASAQASQAELANVTLSAQSELAQDYFQLRIIDEKIALYQRSIEAYQRYLSVIDNKYRAGSESRATLAQAQMQLESARASAQDYQWQRAQLEHAVALLLGRAPADFTLPVAKLDATLPSIPQSLPSALLQRRPDIAYAERNVAAANAAVGVAIAGYYPDLTLSASGGVTASAIHSLLSLPNRAWSLGPELSGTLLDFGATSAKVAQARAAYDASVATYRQTVLSALGEVEDNLVELNTLQGEIAAQQRAAVAAQASARVTRNQYDAGMIDYLDVATTENSSLSEQQSLLSLQSSQWVSSVALIAALGGGWQGESP
>NZ_CP045216.1|WP_152390505.1|804232_806383_+|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase
MLFTVLRFLCRLLWRVELRGDLTALHKEKVLITPNHMSFLDGVLLALFLPIKPVFAVYSSISEQWYMRLLRPVIDFVPLDPTKPMSIKHLVRMINEGRPVVIFPEGRITVTGSLMKIYSGAGFVAAKSAATVVPMRIEGAEYTPFGRLAGVFKRRLFPRITLTVLPATVIPMPEAKRARDRRVLAGEHLHHVMMEARMAVRPRETLFDAFLNARTRYGLSKPCIEDINFKPDSYTGLLKKALGVGRILERYSQQGEFVGLLLPNATVTAAAILGASLRGRVPAMLNYTAGINGMRAALTASQVKTVFTSRQFLEKGNLWHLPQGLTEVQWIYLEDLKDTVTLQDKLWILAHLLLPRRAQVAQQPEDAAMVLFTSGSEGNPKGVVHSHKSLLANVEQIRTVADFTPRDRFMSALPLFHAFGLTVGLFTPLLTGAQVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFASPYDFARLRYVVAGAEKLQEGTRQIYMEKYGIRILEGYGVTECAPVVAINVPMAAKSHTVGRILPGMDSRLIAVPGIEQGGRLQLRGPNVMNGYLRVENPGVLEPPVADNGEGEQEAGWYDTGDIVSFNEGGFCQIQGRAKRFAKIAGEMVSLESVEQIALKASAEKQHAASLRPDGQRGEALVLFTTDSELSRERLQQAAREMGAPELAVPRDIRYMKQLPMLGSGKPDYVSLKQLAEEERA
>NZ_CP045216.1|WP_059012310.1|806379_807570_+|lysophospholipid-transporter-LplT
MSQSVNPDAPLLSRSMLAVIVAQFFSAFGDNALLFATLALLKSQFYPDWSQPILQMLFVATYILLAPFVGQMADSFAKGRVMMFANSLKLLGALVICFGFNPFLGYTLVGVGAAAYSPAKYGILTEITSGARLVKANGLMESSTIAAILLGSVAGGVLADWHLLAALVVCALTYALAVVANLFIPRLQAARPGQSWHAGAMLRSFIASAQLLWRNGETRFSLLGTSLFWGAGVTLRFLLVLWVPVALGITDNKTPTTLNAMVAIGIVIGAAAAAKLVTLQTVRRCMPAGVLIGVMVVLFSLQHSLLNAYLLLMLIGALGGFFVVPLNALLQERGKDTVGSGNAIAVQNLGENSAMLLMLGLYTVAIKLGAPAVATGVGFGALFAMAIAVLWWRTRR
>NZ_CP045216.1|WP_152390506.1|807760_808801_-|NADP(H)-dependent-aldo-keto-reductase
MHYHRIPHSTLEVSQLGLGTMTFGEQNSEADAHQQLDYAVSQGINLIDTAEMYPVPPRPETQGLTEKYIGSWLQKRGSRDKIILASKVAGPVRGSDALIRPNQALDRKNIREALDASLKRLNTDYLDLYQLHWPQRQTNYFGKLGYQYSDNTATVTLLETLEALTEQVRAGKIRYIGVSNETAWGVMRYLQLAEKHELPRIVTIQNPYSLLNRSFEVGLAEISQHEGVELLAYSSLAFGTLSGKYLNGAKPAGARNTLFSRFTRYSGEQSQQAIAAYMALAKQHNLDPSQMALAYVRQQPFVASTLLGATTMEQLKVNVESFNLTLSGEVLEALEAIHRQYTYPAP

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Crispr_ID: NZ_CP045216_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_5

868701-868806

Orphan

Consensus_repeat	Method
CACCGTAGGGTCGCCATTGATGGCGACCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_5

>merge|NZ_CP045216|5|868701-868806|CRISPRCasFinder
CACCGTAGGGTCGCCATTGATGGCGACCTGGCAATGGTACCCGATGCGCATCAATGCGCACCCTGTAAATCGCACTGCACCGTAAGGTCGCCATTGATGGCGACCT

>NZ_CP045216|5|5|868701-868806|CRISPRCasFinder
CACCGTAGGGTCGCCATTGATGGCGACCT	GGCAATGGTACCCGATGCGCATCAATGCGCACCCTGTAAATCGCACTG
CACCGTAAGGTCGCCATTGATGGCGACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_152390523.1\|877408_878836_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP045216.1\|WP_021507361.1\|867952_868624_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP045216.1\|WP_021507355.1\|875064_876480_+\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|182606
NZ_CP045216.1\|WP_021507365.1\|861403_863638_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP045216.1\|WP_152390520.1\|869482_871285_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP045216.1\|WP_059010900.1\|855901_857041_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP045216.1\|WP_021507362.1\|866504_867803_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP045216.1\|WP_152390521.1\|871284_873009_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP045216.1\|WP_125310165.1\|863747_864530_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP045216.1\|WP_021507354.1\|876489_877398_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP045216.1\|WP_021507363.1\|864789_866427_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP045216.1\|WP_021507366.1\|860054_861371_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP045216.1\|WP_058759741.1\|873005_873740_+\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045216.1\|WP_152390519.1\|857234_859964_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP045216.1\|WP_021507360.1\|868826_869186_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP045216.1\|WP_152390524.1\|878835_879441_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP045216.1\|WP_058771604.1\|854931_855816_+\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
NZ_CP045216.1\|WP_152390522.1\|873796_874816_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP045216.1\|WP_021507370.1\|854144_854912_+\|2-dehydro-3-deoxyglucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
NZ_CP045216.1\|WP_152390525.1\|879495_879816_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_152390523.1\|877408_878836_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP045216.1\|WP_021507361.1\|867952_868624_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.60223e-148
NZ_CP045216.1\|WP_021507355.1\|875064_876480_+\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|182606	PRK10637, cysG, siroheme synthase CysG.	0
NZ_CP045216.1\|WP_021507365.1\|861403_863638_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP045216.1\|WP_152390520.1\|869482_871285_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP045216.1\|WP_059010900.1\|855901_857041_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP045216.1\|WP_021507362.1\|866504_867803_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP045216.1\|WP_152390521.1\|871284_873009_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP045216.1\|WP_125310165.1\|863747_864530_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	4.27005e-161
NZ_CP045216.1\|WP_021507354.1\|876489_877398_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP045216.1\|WP_021507363.1\|864789_866427_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP045216.1\|WP_021507366.1\|860054_861371_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP045216.1\|WP_058759741.1\|873005_873740_+\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.91111e-138
NZ_CP045216.1\|WP_152390519.1\|857234_859964_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP045216.1\|WP_021507360.1\|868826_869186_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	1.87311e-54
NZ_CP045216.1\|WP_152390524.1\|878835_879441_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	2.43572e-149
NZ_CP045216.1\|WP_058771604.1\|854931_855816_+\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0
NZ_CP045216.1\|WP_152390522.1\|873796_874816_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP045216.1\|WP_021507370.1\|854144_854912_+\|2-dehydro-3-deoxyglucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
NZ_CP045216.1\|WP_152390525.1\|879495_879816_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	2.22348e-45

>NZ_CP045216.1|WP_021507361.1|867952_868624_+|7-carboxy-7-deazaguanine-synthase-QueE
MFYPINEMFQTLQGEGFYTGVPAIFIRLQGCPVGCSWCDTKHTWETRADRETSLGDILVKTVESDAWGSADAATLIESIQRQGWTARHVVITGGEPAIFDLRPLTEALEAAGFQCQIETSGTHEVHCSAATWVTVSPKVNMRGGYDVLPQALQRADEIKHPVARERDVEALDALLAGLQDEKKRIVALQPISRGEAATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP045216.1|WP_021507362.1|866504_867803_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIADAVKGKDAKDQANIDKIMIELDGTDNKSNFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEDLTKQYPIVSIEDGLDESDWNGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDKAPFNGLKEVKGQA
>NZ_CP045216.1|WP_021507363.1|864789_866427_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSEVLRKERRGDYLGATIQVIPHITNAIKERIIEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVDVGREHTMYMHLTLVPYMAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFNLSAPEANLAEWEQVIYEEANPGGEVTIGMVGKYVELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKLLTAQYARENNIPYLGICLGMQIALMEFARNVAGMEGANSTEFVPDCKYPVVALITEWRDENGNVEQRTEQSDLGGTMRLGSQQCQLTPESKVRQLYGSDVITERHRHRYEVNNLLLKQIEAAGLHIAGRSGDDQLVEIIEIPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAAQEHQKRLAK
>NZ_CP045216.1|WP_125310165.1|863747_864530_+|nucleoside-triphosphate-pyrophosphohydrolase
MTALNRLLTIMQTLRDPVRGCPWDRQQTFASIAPYTLEETYEVIDAIQREDFDDLRGELGDLLFQVVFYARMAEEQQRFNFDDICNAISDKLERRHPHIFGEVQVDSTAEVLKNWEAIKQRERAEKSQHSVLDDIPKALPALMRAYKIQKRCHSVGFDWDSLGPVLDKVHEEIDEVMHEAQQAVVDSDKLEEEIGDLLFATVNLSRHLGSKAETALQKANDKFERRFRQVENIIQAQGLSMEQATLAQMEAAWQQVKAGE
>NZ_CP045216.1|WP_021507365.1|861403_863638_+|GTP-diphosphokinase
MVAVRSAHLNTAGEFALDQWIASLSISNPQSCERLAETWRYCEAETHDHPDQALLLWRGIEMVEILTMLSMDIDSLRAALLFPLANAGVVSEEDLEKAFGKSIVSLVHGVRDMDAIRQLKAIHNDSMASEQVDNVRRMLLAMVEDFRCVVIKLAERIAHLREMKDAPEDERVLAAKESTNIYAPLANRLGIGQLKWELEDYCFRYLHPDEYKRIAKLLHERRIDREQYIDNFVDNLRKEMQKEGVRAEVYGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIVAERLQDCYGALGTVHTLYRHLPSEFDDYVANPKPNGYQSIHTVVLGPQGKTVEIQIRTRQMHEDAELGVAAHWKYKEGPTASNARGAAGHEERIAWLRKLITWQEEMADSGEMLEEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDIGHRCIGAKIGGRIVPFTYQLQMGDQIEVITQKQPNPSRDWLNPNLGYITTSRGRSKIHAWFRKQDRDKNIAAGRQILDSELGQLDISMREAEKLLLPRYNVSSQDELLAMIGGGDIRLNQMVNFLQAKLNKPSAEEEDREALRQLTQKSHQPSSARKESGRVVVEGVGNLLHHIARCCQPIPGDDIVGFITQGRGISIHRADCDQLSELISHAPERIVDAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLATIDMDIEIYNQQVLGRVLARLNQVPDIIDARRLH
>NZ_CP045216.1|WP_021507366.1|860054_861371_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKQRVTTKQRLSVTIDELDPFGQGVARHNGKTLFVSGALPGEQAEVILTEDKRQFARGKAKKITQPSPQRQQPRCIHFGVCGGCQQQHVSVALQQESKARALGRMLSQEAALPVQVDEIISAAPWGYRRRARLGLQWLPKQQRLQMGFRQAGSNDLIDVTQCPVLVPELEALLQPLHHCLSSLHAVKRLGHVELVLADNGPLMVLRHLDALSAADRTKLERFSHEHRLMIWLADGSDALQALGAEQPYYRSFDLQLTFSPQDFIQVNDGVNQQMVAQAIAWLDLQPDDRVLDLFCGMGNFTLPLGKFVQNAVGVEGVAALVRQAEYNAQLNNLRNVCFFQHNLEEDVSRQPWAAQGFNKVLLDPARAGAAGVMSHIVKLAPQRVVYVSCNPTTLARDSQTLLSAGYHLERVAMLDMFPHTSHLESMVLFSKT
>NZ_CP045216.1|WP_152390519.1|857234_859964_-|two-component-sensor-histidine-kinase-BarA
MTKYSLRARMMILILAPTLMIGLLLSTFFVVHRYNELQHQVRDAGANIIEPLAVSSEYGMTWHNRDAIRELVSLLHRRHSDIVRAITVFDNNNHIYVSSNNNQNLALLQKADISTLADGVSVERHGNLMVLRTPIISERYSVDELPGEDAKPAGNPLGYVAIELDLQSVRLEQYKEVFVATLLLLFCLCIAMLFAYRLMRDVTGPIRNMVTTVDRIRRGQLDSRVDGYMLGELSILKNGINAMAMSLTAYHEEMQQNIDQATYDLRETLEQLEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRQMLKTGLSTNQRDYMSTIERSANNLLSIINDVLDFSKLEAGKLVLESIPFPLRATLDETLVLLAPSAHEKGLEITVCLEKQVPDNVIGDPLRLQQILINLIGNAIKFTERGHIDLRVELRHLSITRAELEIQVHHTGIGISEQQQSQLFQAFRQADASISRRHGGTGLGLVITQKLVHEMGGEIAFHSRQNQGSTFWVQVHLDLNPNAPAIPRMLDDLHATPLAYIEPHPAVAKAVQEMLSITPLQVQHFASLDDLPDANFPLLLMGLPVSDPHPATLSDALIARLRAHADSVLLALPSEMMLFADDLRARGIAGCIAKPVSLTRLLPMLLDLNMRHSDDAPRGVRQPLTVMAVDDNPANLKLIGALLEEQVQNIILCDNASQAIHQARQQRLDVILMDIQMPDIDGIRASEIIRSLPQHASTPIVAVTAHALDGEREQLIAAGMNDYLAKPIDEDKLKQLLQRYAPGSVASAVRQPAIAPSLDWALALHQAANKAELARDLLQMLLDFLPEVEQRVAQCMAQNDVDGLREIIHKLHGSASYSGVPRLKQLCQQLEKSLHQESDIAALEPELLELSDEMANVAREARQVLGVA
>NZ_CP045216.1|WP_059010900.1|855901_857041_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEAGFREIFPAADYVKIPVADGGEGTVEAMVAATQGNIVRLTVTGPLGEPVDAFYGLSGDARTAFIEMAAASGLELVPAAQRDPLITTSYGTGELIKNALDRGVDHIIIGIGGSATNDGGAGMVQALGARLLDSHGSGIGYGGGALPQLAKIEIADLDPRLLQCRIEVACDVTNPLIGEEGASAIFGPQKGATPQLVQQLDAALGHYAAIIQRDLDIDVLHIAGGGAAGGMGAALHAFCHAELRRGIEIVTEALGLAQQVQDADLVITGEGRIDSQSVNGKVPVGVAQVAKQFNKPVIGIAGSLTADVGVVHQHGIDAVYSVLSGICSLEEALANAAQNVRLTARNVAATIKVGQGL
>NZ_CP045216.1|WP_058771604.1|854931_855816_+|2-hydroxy-3-oxopropionate-reductase
MKIGFIGLGIMGKPMSKNLVKAGYTLVVRDHNASNEAELVELGATVAKTPKELAAQVDVVITMVPNSPQVKEVCLGENGIIEGAKPGLVVIDMSSIAPLASREVHDALAEKGIRMLDAPVSGGEPKAIEGTLSVMVGGDKALFDQCYDVLKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALSLATKAGVNPELVYQAIRGGLAGSTVLDAKAPMVLDRNFKPGFRIDLHIKDLANALDTSHGIGAHLPLTAAVMEMMQALKVDGQGTSDHSALACYYEKLAKVEITR
>NZ_CP045216.1|WP_021507370.1|854144_854912_+|2-dehydro-3-deoxyglucarate-aldolase
MSNAWPNPFRRRLLAGETLIGSWCALANPLTTEVLGLAGFDWLVLDGEHAPNDITTFIPQLMALKGSPSAPVVRPPCNEPIIIKRLLDIGFYNFLIPFVETAEEAARAVASTRYPPAGIRGVSVSHRSNMYGTLADYNATINDNITVLVQIETQQAVDNIDAIAAVDGVDGIFVGPGDLSAALGYLGQPAHPEVLKVIRYILERAKAAGKPSGILAPVEADARRYLEWGASFVAVGSDLGVFRHATQALCDKFKQ
>NZ_CP045216.1|WP_021507360.1|868826_869186_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLFKEFQFEAAHRLPHVPEGHKCGRLHGHSFLVRLEITGEVDAHTGWVMDFAELKAAFRPIYDRLDHHYLNDIPGLENPTSEVLAKWIWDEMKPILPELSAVMIKETCTAGCVYRG
>NZ_CP045216.1|WP_152390520.1|869482_871285_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQAPPAMLPLSPEQIARLQAATTDFNPTQLAWLSGYFWGMVNQAPGTVAAPAPVAAEVPGITLISASQTGNARRLAEQLRDDLLAAKLSVNLVNAGDYKFKQIGQEKLLVIVTSTQGEGEPPEEAVALHKFLLSKKAPKLSDTAFAVFGLGDTSYEFFSQAGKDFDQRLAELGGERLLDRVDADVEYSELASAWRLQLTDILKARVPAEPAAQLAASAAGSVNLVDSSPYTKEAPLTASFALNQKITGRNSDKDVRHIEIDLGDSGLRYQPGDALGVWYENDAELVQELLQLVWLKGDEQVEVRGETLPLAEALQKHFELTVNTPHIVEQYAALSRNEALLALAGDKPKLQSFAQSFPIVDMVRQAPTELNAGQLTGLLRPLTPRLYSIASSQAESETEVHITVGAVRYEIDGRQRGGGASTWLADRLEEDGEIRVFIEHNDNFRLPANPDAPVIMIGPGTGIAPFRAFMQQRENDGASGKNWLFFGNPHFTEDFLYQVEWQKYVKDGLLTHIDLAWSRDQAEKIYVQDKIRARGAEVWRWIEEGAHLYVCGDANRMAKDVEQALLDVVVEHGGMDRETADEFLSELRIERRYQRDVY
>NZ_CP045216.1|WP_152390521.1|871284_873009_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEDKLSDAERLKKQSNYLRGTILEDLDNGLTGGFTGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMMLRCRLPGGIITPTQWLAIDKFATDKTLYGSIRLTNRQTFQFHGILKKNVKPTHQMLHEVGLDALATANDVNRNVLCTSNPVESELHQEAYEWAKKLSEHLLPQTRAYAEIWWDQEKVATTDQEPILGETYLPRKFKTTVVVPPHNDVDLHANDLNFIAIAENGKLIGFNLLVGGGLSIEHGNKATYARTASEFGYLPVEKILDVAAAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGLTFEPIRPYEFTTRGDRIGWVKGIDKKWHLTLFIENGRLLDYPGRPLKRGIAEIAKVHQGDFRLTANQNLIVAGVPEAQKAQIEAIAREHGLMEAVTPQRENSMACVAFPTCPLAMAEAERFLPSFVSKVEEIMHRHGVGEEHIVLRVTGCPNGCGRAMLAELGLVGKAPGRYNLHIGGNRIGTRIPRMYRENITENEILASIDELVARWASERTADEGFGDFVIRAGIVQPVVDPARDFWDPEAV
>NZ_CP045216.1|WP_058759741.1|873005_873740_+|phosphoadenylyl-sulfate-reductase
MTLPDLASLNSGSKVDRIMALAESNVQLEKLSAEQRVSWALEQLPGAFVLSSSFGIQAAVLLHMVTQQRPDIPVILTDTGYLFPETYRFIDELTQQLNLNLQIFRAETSPAWQEARYGKLWEQGVEGIEQYNQLNKVEPMNRALQTLGAQTWFAGLRRDQSGSRASLPVLAVQRGVFKILPIIDWDNRQVHQYLKQHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP045216.1|WP_152390522.1|873796_874816_-|aminopeptidase
MFATLRRSVQAALIAGGLPLLAQAATIAPGHFAEQQLRHIATYFPGRMSGSPAELMTADYLQQQFTELGYQSNTRQFNTSYNWLEKQGITRRHKVTATSVIAARAGSVPQEILIVTHLDTWTPLSQHEADNNLGGLRLQGVDDNASGLGVMLELAQALSQTPLHYGVRFVALSAGEAGLHGMDDYLARMSVQEKKDTLLVIDLNSLIVGDRLYFNNGMNTPAAVRKQTSARALQIAHRYGITAASHVLTAHDYPGVNPFDKAGIPLLDVTAANWALGNKAGEQQRARSPHFPEGTVRHQTGRDNLTYIDHWLPGRIHQRTRDSVRILQPLLTELANPTL
>NZ_CP045216.1|WP_021507355.1|875064_876480_+|uroporphyrinogen-III-C-methyltransferase
MDYLPLFADLKNRPVLVVGGGEIAARKIELLRRAGAHVRVAARELGHELQALRDINAIEWIAQHFDAAQLDDVFLVIAATDDNALNAQVFDAANARHKLVNVVDDQPKCSFIFPSIVDRSPLVVAISSSGTAPVLARLLREKIEALLPANLGQMAEVAGQWRDKVKQRYHKMSDRRRFWERAFNGLFASQMAAGNVNEARRTLDRELENTSDNQGEITLVGAGPGDSGLLTLRGLQVMQLADVVLYDHLVSDEVLELVRRDADRICVGKRAGAHSVPQEETNQLLVTLAQQGKRVVRLKGGDPFIFGRGGEELQAAQAAGIPFQVVPGITAAAGATAYAGIPLTHRDYAQSVLFITGHCRADGDGIDWPSLARARQTLAIYMGTVKAAEIAAGLIEHGRAPSTPVAVIGRGTRQDQQVLTGTLAQLEALAAAAPTPALLVIGEVVNLHGQLAWFQHSAQQGARESAVVNLA
>NZ_CP045216.1|WP_021507354.1|876489_877398_+|sulfate-adenylyltransferase-subunit-CysD
MDQNRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTVKAMGAELLVHRNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTELDIWQYIFLENIEIVPLYLAAPRPVLERDGMLMMIDDDRINLQPGEVIKQRMVRFRTLGCWPLTGAVESEAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP045216.1|WP_152390523.1|877408_878836_+|sulfate-adenylyltransferase-subunit-CysN
MNTVIAQQIAEQGGVEAWLTAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFIATLLGIKHLVVAINKMDLVAYSQETFEQIKQDYLDFAAQLPDDLDIRFVPMSALEGDNVATPSVTMPWYSGPTLLDVLETVELKRVVDTQPMRFPVQYVNRPNLDFRGYAGTLASGVVSVGQRVKVLPSGVESSVARIVTFDGDLQQAAAGEAITLVLNDEIDISRGDLLVDAAADLQAVQSATVDVVWMAEQPLQPGQSYEVKIAGKKARGRVEKILHQVEINTLEKRAVDSLPLNGIGLVEVTFDEPMVLDAYQQNPVTGGMIFIDRLSNVTVGAGMIHQPLSAARSQAGQYSDFELELNALVRRHFPHWNAHDLLGGQ
>NZ_CP045216.1|WP_152390524.1|878835_879441_+|adenylyl-sulfate-kinase
MAQHDENVVWHDHPVTRTEREQQHGHRGVVLWFTGLSGSGKSTVAGALEQALHRLGVSTYLLDGDNVRHGLCRDLGFSDDDRKENIRRVGEVAKLMVDAGLVVLTAFISPHRAERQMVRNLLGDGQFIEVFVDTPLAVCEARDPKGLYKKARAGELRNFTGIDSVYEAPDAPEIQLDGEQLVTKLTGQLLDLLRHHDIIRS
>NZ_CP045216.1|WP_152390525.1|879495_879816_+|DUF3561-family-protein
MQTVTPMLARKDERTPDEPRSSLPGGVIGFLSYWCALGIPFLLYGSNTLFFFLYTWPFFLALLPVSVLIGIVLSLMLRGRLWWSGLITALVVVCLFWLLFSFLSGW

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Crispr_ID: NZ_CP045216_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_6

1534402-1534486

Orphan

Consensus_repeat	Method
CGCTGGCGGTGCGCATTAATGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_6

>merge|NZ_CP045216|6|1534402-1534486|CRISPRCasFinder
CGCTGGCGGTGCGCATTAATGCGCACCCTACAGGGCTGTCACCCGCATGGCGACCGTGCTGCGCTGGCGGTGCGCATCAATGCGC

>NZ_CP045216|6|6|1534402-1534486|CRISPRCasFinder
CGCTGGCGGTGCGCATTAATGCGC	ACCCTACAGGGCTGTCACCCGCATGGCGACCGTGCTG
CGCTGGCGGTGCGCATCAATGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_021509801.1\|1534558_1535263_+\|phosphonate-C-P-lyase-system-protein-PhnL	unknown	unknown	gnl\|CDD\|227118
NZ_CP045216.1\|WP_152390699.1\|1541470_1544056_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP045216.1\|WP_058757355.1\|1540632_1541517_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP045216.1\|WP_104188816.1\|1536395_1536932_+\|ribose-1,5-bisphosphokinase	unknown	unknown	gnl\|CDD\|236648
NZ_CP045216.1\|WP_021509802.1\|1535259_1536396_+\|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase	unknown	unknown	gnl\|CDD\|237967
NZ_CP045216.1\|WP_031280167.1\|1538633_1539563_+\|phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|132472
NZ_CP045216.1\|WP_152390695.1\|1525443_1525896_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
NZ_CP045216.1\|WP_059012660.1\|1533635_1534397_+\|phosphonate-C-P-lyase-system-protein-PhnK	unknown	unknown	gnl\|CDD\|183280
NZ_CP045216.1\|WP_152390697.1\|1531728_1532805_+\|carbon-phosphorus-lyase-complex-subunit-PhnI	unknown	unknown	gnl\|CDD\|377563
NZ_CP045216.1\|WP_152390700.1\|1544200_1545706_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP045216.1\|WP_021509795.1\|1529994_1530711_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	unknown	unknown	gnl\|CDD\|182227
NZ_CP045216.1\|WP_021312959.1\|1526413_1527376_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_CP045216.1\|WP_088518067.1\|1527516_1529682_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|227334
NZ_CP045216.1\|WP_104093158.1\|1532794_1533646_+\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	unknown	unknown	gnl\|CDD\|226154
NZ_CP045216.1\|WP_058757348.1\|1530707_1531157_+\|phosphonate-C-P-lyase-system-protein-PhnG	unknown	unknown	gnl\|CDD\|377702
NZ_CP045216.1\|WP_088518075.1\|1536928_1537699_+\|phosphonate-metabolism-protein-PhnP	unknown	unknown	gnl\|CDD\|183052
NZ_CP045216.1\|WP_152390696.1\|1531153_1531729_+\|phosphonate-C-P-lyase-system-protein-PhnH	unknown	unknown	gnl\|CDD\|236655
NZ_CP045216.1\|WP_152390698.1\|1539772_1540636_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP045216.1\|WP_021509805.1\|1537779_1538607_+\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP045216.1\|WP_152390694.1\|1523593_1525375_+\|thiamine-pyrophosphate-requiring-protein	unknown	unknown	gnl\|CDD\|181344

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_021509801.1\|1534558_1535263_+\|phosphonate-C-P-lyase-system-protein-PhnL	gnl\|CDD\|227118	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.45335e-133
NZ_CP045216.1\|WP_152390699.1\|1541470_1544056_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.42252e-90
NZ_CP045216.1\|WP_058757355.1\|1540632_1541517_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	5.74056e-83
NZ_CP045216.1\|WP_104188816.1\|1536395_1536932_+\|ribose-1,5-bisphosphokinase	gnl\|CDD\|236648	PRK10078, PRK10078, ribose 1,5-bisphosphokinase; Provisional.	6.08794e-84
NZ_CP045216.1\|WP_021509802.1\|1535259_1536396_+\|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase	gnl\|CDD\|237967	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional.	0
NZ_CP045216.1\|WP_031280167.1\|1538633_1539563_+\|phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|132472	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein. This model is a subset of the broader subfamily of phosphate/phosphonate binding protein ABC transporter components, TIGR01098. In this model all members of the seed have support from genomic context for association with pathways for the metabolims of phosphonates, particularly the C-P lyase system, GenProp0232. This model includes the characterized phnD gene from E. coli. Note that this model does not identify all phnD-subfamily genes with evident phosphonate context, but all sequences above the trusted context may be inferred to bind phosphonate compounds even in the absence of such context. Furthermore, there is ample evidence to suggest that many other members of the TIGR01098 subfamily have a different primary function.	3.78969e-104
NZ_CP045216.1\|WP_152390695.1\|1525443_1525896_-\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.86632e-05
NZ_CP045216.1\|WP_059012660.1\|1533635_1534397_+\|phosphonate-C-P-lyase-system-protein-PhnK	gnl\|CDD\|183280	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional.	1.35215e-180
NZ_CP045216.1\|WP_152390697.1\|1531728_1532805_+\|carbon-phosphorus-lyase-complex-subunit-PhnI	gnl\|CDD\|377563	pfam05861, PhnI, Bacterial phosphonate metabolism protein (PhnI). This family consists of several Proteobacterial phosphonate metabolism protein (PhnI) sequences. Bacteria that use phosphonates as a phosphorus source must be able to break the stable carbon-phosphorus bond. In Escherichia coli phosphonates are broken down by a C-P lyase that has a broad substrate specificity. The genes for phosphonate uptake and degradation in E. coli are organized in an operon of 14 genes, named phnC to phnP. Three gene products (PhnC, PhnD and PhnE) comprise a binding protein-dependent phosphonate transporter, which also transports phosphate, phosphite, and certain phosphate esters such as phosphoserine; two gene products (PhnF and PhnO) may have a role in gene regulation; and nine gene products (PhnG, PhnH, PhnI, PhnJ, PhnK, PhnL, PhnM, PhnN, and PhnP) probably comprise a membrane-associated C-P lyase enzyme complex.	0
NZ_CP045216.1\|WP_152390700.1\|1544200_1545706_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP045216.1\|WP_021509795.1\|1529994_1530711_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	gnl\|CDD\|182227	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional.	6.74029e-153
NZ_CP045216.1\|WP_021312959.1\|1526413_1527376_+\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	1.55569e-29
NZ_CP045216.1\|WP_088518067.1\|1527516_1529682_-\|EAL-domain-containing-protein	gnl\|CDD\|227334	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].	6.7105e-117
NZ_CP045216.1\|WP_104093158.1\|1532794_1533646_+\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	gnl\|CDD\|226154	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism].	0
NZ_CP045216.1\|WP_058757348.1\|1530707_1531157_+\|phosphonate-C-P-lyase-system-protein-PhnG	gnl\|CDD\|377702	pfam06754, PhnG, Phosphonate metabolism protein PhnG. This family consists of several bacterial phosphonate metabolism protein PhnG sequences. In Escherichia coli, the phn operon encodes proteins responsible for the uptake and breakdown of phosphonates. The exact function of PhnG is unknown, however it is thought likely that along with six other proteins PhnG makes up the the C-P (carbon-phosphorus) lyase.	1.18783e-65
NZ_CP045216.1\|WP_088518075.1\|1536928_1537699_+\|phosphonate-metabolism-protein-PhnP	gnl\|CDD\|183052	PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional.	1.10989e-127
NZ_CP045216.1\|WP_152390696.1\|1531153_1531729_+\|phosphonate-C-P-lyase-system-protein-PhnH	gnl\|CDD\|236655	PRK10147, phnH, phosphonate C-P lyase system protein PhnH.	8.0734e-76
NZ_CP045216.1\|WP_152390698.1\|1539772_1540636_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	5.62307e-88
NZ_CP045216.1\|WP_021509805.1\|1537779_1538607_+\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	4.58939e-115
NZ_CP045216.1\|WP_152390694.1\|1523593_1525375_+\|thiamine-pyrophosphate-requiring-protein	gnl\|CDD\|181344	PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional.	0

>NZ_CP045216.1|WP_059012660.1|1533635_1534397_+|phosphonate-C-P-lyase-system-protein-PhnK
MHSEQPLLAVHNLTHLYAPGKGFEDVSFALYPGEVLGIVGESGSGKTTLLRSLSARLTPQQGNILYHGRDLYQLSESERRRLLRTEWGVVHQHPLDGLRPQVTAGGNIGERLMAIGQRHYGDIRNEALRWLQDVEIPANRIDDLPTTFSGGMQQRLQIARNLVTQPTLVFMDEPTGGLDVSVQARLLDLLRTLVRELNLAVIIVTHDLGVARLLAHRLLVMKQGKVVESGLTDRVLDDPHHPYTQLLVSSVLA
>NZ_CP045216.1|WP_104093158.1|1532794_1533646_+|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ
MMSELTGYNNGYLDEQTKRTIRRAILKAVAIPGYQVPFAGREMPMPYGWGTGGIQITASIIGDSDVLKVIDQGADDTTNAVSIRRFFQRVSGAATTEATKDATLIQTRHRIPETPLEEDQVLIFQVPIPEPLRFIEPRETETRTMHALEEYGIMQVKLYEDIARYGHIATTYAYPVKVNDRYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPYTKVESLDFDDHPFSVQSWEHPCALCGSRHSYLDEVVMDDAGTRMFVCSDTDFCHQQQEQQHAQ
>NZ_CP045216.1|WP_152390697.1|1531728_1532805_+|carbon-phosphorus-lyase-complex-subunit-PhnI
MYVAVKGGEKAIASAHQLQADLRRGDRSVAELGCDQVAQQLGLAVDRVMTEGGIFDTQLAALAIKQSSGDLVEAIFLLRAYRTTLPRLADSLALETAEMRIERRISAVYKDLPGGQVLGPTYDYSHRLLDFTLLANGETPAAARDDQALAQRCPHVFSMMTREGLAAREEDDGSEPCDITRQPPDYPASRAARLQQLVRGDEGFLLALGYSTQRGYGRNHPFAGEIRTGYLSVSICPEELGFEIEIGEILLTECEMVNGFTTQGDSAPHFTRGYGLVFGRAERKAMAMALVDRALQAPDYQERIAGPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELELLQRLRQQHQEQNDE
>NZ_CP045216.1|WP_152390696.1|1531153_1531729_+|phosphonate-C-P-lyase-system-protein-PhnH
MTLLASFNHPVADAQRAFRRILKAMSEPGVMVSLPLAQGWGDLSPAATAVLLTLVDQESALWLDRRVDSDILRSNLRFHTGVPIVDERDAPFALTHAAANPDPACFAAGDNLSPEKSTTLIVEVPSLNGGLTLRLSGPGLREPRAVAPQLPAAILTYLRERPHPFPQGVDLIFTCGEAMMALPRTTDVEVC
>NZ_CP045216.1|WP_058757348.1|1530707_1531157_+|phosphonate-C-P-lyase-system-protein-PhnG
MKQQTARQHWLSVLAHSEASALASHWQSLQLTPAFERLRPAETGLTRLQARMGGSGKRFVMGDATVTRAVIRLHDGTLGFSYVLGRDKAHAERCALIDALLQQPETQALLQEKIIAPLAALREEQRQLRAREIASSKVDFFTLVRGDNE
>NZ_CP045216.1|WP_021509795.1|1529994_1530711_+|phosphonate-metabolism-transcriptional-regulator-PhnF
MEISRHPTTVYQAVAAQLEQALQERYRCGDYLPSEQQLADHYAVNRHTLRRAVDELVNKGLLQRRHGVGILVLMRPYDYPLHAQARFSQNLLEQGSHPTSERLLAVLRPASSDVAAALGSDEGASVIHLRTLRRVNSVPVCVINHYLADLRWWPALQTFQHGSLHDFMQQQLGLQLSRRQTRISTRRAQAKECKQLEITLHAPLLCVRTLNTQPDGQVAEYSVSLTRGDMIELTLEHQ
>NZ_CP045216.1|WP_088518067.1|1527516_1529682_-|EAL-domain-containing-protein
MINTFKLSHGFRRNFLREVILPLVAILLLTFLGAGFGLFWSTSATNHEAREQQQRMIAASFNQSLSEHLRQLRSLTRWSPLADQLAQPQPDSDWLNQNVGSWLYDMFDHQLIVLLDRTNQPTAVWRNGQPVADLRIGPYLRDLLQTPLVQSSDEVPGPADRADFVRIGQRAAALAVGDISSTREAGRYRLVSIKFLDDGYLRNLSERSQLRQLFFSDGVPQNEHKARYPLTSRQGDIVGYLSWDPDKPGAQMLRTLGPSTLISVLLITLLCLFMVRRIWTSSLDLSQSLLKLGASEAQAQHLAFHDVLTGLPNRALVEDRLTQALAAATRHDQRVALLLLDLDRFKIINDTWGHHAGDDLIIEVARRLSHLVRASDTVGRIGGDEFIIVMPEVENIGQVQALAQRIIAALGEPYQLVGNELWVGVSIGLALAPRDGIDRLELMRKADIALYEAKNGGRGQYRQFEKVMDESLRTRQQIAADLRQALVTYDGLAVWYQPLMEISGQRIVGLEALLRWHHPQRGDVSPADFIAIAEETGMIIPLGEWVLREACKTALKLPQVIVAVNVSPVQFRASGFVERMIEIVQSEGADPQRLELEITEGVLIEDEHEARNSIIALRDAGFRIALDDFGTGYSSLNYLSTFPVDKIKIDRSFTQSLGVAENSTAIVESVVRLGHAMGLTVTAEGVETEGQKNALADAGCNELQGYLFSRAVPLSEIERMV
>NZ_CP045216.1|WP_021312959.1|1526413_1527376_+|IS110-family-transposase
MQTRMPVGIDVASGKFDVAVWKGDTSYKTKVFPNTPKGFIALKKWLEPFGCCHICMEATGAYSEPLATFLHDEGYDVSVENPARIRRFGQAELSRNKTDKDDARMIARYCKLHGPSLWQPAPLNERRLKALVKRLTNLQEMRQMEENRLEVSDAVVQPSIRVVIAALDAQIDETKRAINDHIDNDPGLKKNRELLESIPGIAGVLSSTMLAYLGDMSRFSSSKALVAWVGLNPMRQESGEWKGKSRISKMGNSAMRKALYMPAIVAMKWNPAVSALKKRLDAGKKTGKVVVCAAMKKLLQLAYGVLKSGRPFDAEICLAR
>NZ_CP045216.1|WP_152390695.1|1525443_1525896_-|hypothetical-protein
MKNRKYPRLKHYNYRSAGAYFLTLVCHQRRSLFGDVHDGIMIASPLGNIVISAWNEVPRRTRFATLDTFALMPNHFHAILWLQEHNERSINQIINLFKGGVTRQAGYKIWQRSFYDRVIRNENELLHIRQYIMDNAKRWESDRLYIPGAH
>NZ_CP045216.1|WP_152390694.1|1523593_1525375_+|thiamine-pyrophosphate-requiring-protein
MSKKTSDFFVERLQAWGVTRIYGYPGDGINGVLGAIQRANKAGAGIEFIQVRHEEMAAFMAAGHAKFTGELGVCLSTGGPGATHLLTGLYDAKMDHAPVLAIAGQAETTARGASYQQEMNLDRIFADVANFVQEAAAPAQVQHLVDRGVRIAKAQNGVAVIILPKDLQDENWQPPQHAHGFTHSGPGYQRPKIVPYDEDLSRAAEVLNAGKKVAVLIGAGARGAAVEVVQIANVLGAGVAKALLGKDVLPDDAPFVTGSIGLLGTKPSWELMQNCDTLLMIGSGFPWTEFLPPEGKVRAVQIDIDPAMLGLRYPCEVNLHGDAAETLRALLPLLTHKADRHWQEEIAVQVRDWWTLMEQRAMAPANPVNPQRVVWEMSPQLPEDAIVTSDSGSCANWFARDYRVKQGQRATLSGGLACMGAAVPFAIAAKFAFPTQPVVALVGDGAMQMNNLAELITIQKYWQQWADPRLIVCVFNNQDLNQVTWEQRVMEGNPRFEASQQLPDVQYARFADSLGLQGIYVDRPEDLAAAWQQALSATRPVVLEVKTDPEVAPLPPHITLKQAKAFMSSMAKGDRGMAQVISDTASQLLHSKG
>NZ_CP045216.1|WP_021509801.1|1534558_1535263_+|phosphonate-C-P-lyase-system-protein-PhnL
MQPILRVENLSKTFVLHNQNSAELPVLQHASLEVAAGECVVLHGRSGSGKSTLLRALYGNYQANSGHIWLQHHGQWVDLAQAPARQMLAIRRDTVGWVSQFLRVIPRVPTLEIVMQPLLERGVERARCEQRARELLTRLNVPQRLWSLAPSTFSGGEQQRVNIARGFIADYPVLLLDEPTASLDSANSAAVVELIEQARARGAAIVGIFHDEAVRARVADRLHVMQPLHTGEQA
>NZ_CP045216.1|WP_021509802.1|1535259_1536396_+|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase
MIVNNVRLVLENEVVSGSLEMRGGRIASFSDSGSQQPGALDGGNAFLLPGLVELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAIGVGDVRDGGHRLENLSKMITAIQDSNRKGINRADHQLHLRCELPHHTTLPLFEALMSTPELSLVSLMDHSPGQRQYASLEMYRTYYQGKYQLNDEQMDQFEREQLALAAEFSTPNRNAIAGLCQARGIPVASHDDATAAHVAESHAVGSAIAEFPTTLEAARASRDCGMRVLMGAPNIVRGGSHSGNVAAWQLASHGLLDILSSDYYPASLLDAVFRLVADERNALTLPQAAALVTRNPAQAIGLHDRGTIAEGLRADLVLAHTDHGHVHIRHVWSQGRLVF
>NZ_CP045216.1|WP_104188816.1|1536395_1536932_+|ribose-1,5-bisphosphokinase
MARLIWLTGPSGSGKDSLLNALREAPPDKLVIAHRYITRPADAGGENHVALSEAEFRRREALGLFAISWRAHGLSYALGEEIDHWLARGLNVLVNGSRLHLPVVRQHYGEQLLPLVLQVSPAVLAARLRQRGRESEADIQRRLARAAEPLPAHCHALNNDGALIDTLHQLRQLLEHPP
>NZ_CP045216.1|WP_088518075.1|1536928_1537699_+|phosphonate-metabolism-protein-PhnP
MNLTFLGTGGVQAAPLFGCDCRACERARQQPRYARHATSALIDTGRERILLDAGLPDLHQRFQPGELSRILLTHFHMDHVAGLFSLRWGRGAPIPVWAPPDEKGCDDLFKHPGLLAFRPALTPFVAHSFGSLQVTALPLQHSRLTYGYLFDWHGTRLAWLCDTCGLPPDTADFLQGQPLDQLVIDCNDAPRAAVGNHNDVTRALHIVARLAPRQAWLVHLSHEMDNWLLDNGLPENVSVPFDGQQIAVGLRDAVTV
>NZ_CP045216.1|WP_021509805.1|1537779_1538607_+|phosphonate-ABC-transporter-ATP-binding-protein
MAQALLKTVVDNAHPAQRHGDKVLSVQGLCKAFGDNRVLDDVSFDLHAGELVAVIGRSGAGKSTLLHMLNGTIASSEGAILSMRHGEADRDVVTLNSRQMREWRSECGMIFQDFCLVPRLDVLTNVLLGRLSQTSTLKSFFKIFSDTDRAQAIELLQWMNMLPQALQRAENLSGGQMQRVAICRALMQRPKILLADEPVASLDPKNTKRIMDVLRQVSEQGISVMVNLHSIELVQQYCTRVIGIQRGKVLFDGHPAQLTDSLLHALYGDEINQLH
>NZ_CP045216.1|WP_031280167.1|1538633_1539563_+|phosphonate-ABC-transporter-substrate-binding-protein
MKLTALALLTGALMAFGVNAADAPKQLNLGILGGQNATQQIGDNQCVKTFFDKELGVDTQLRNSSDYAGVIQGLLGNKIDMVLSMSPASYASVYLQNPKAVDIVGIVVDDKDGSKGYHSVVIVKADSPYKKLEDLKGKSFGMADPDSTSGFLMPNQAFKKEFGGTVDDKYNNTFSSVTFSGGHEQDILGVLNGQFDGAVTWTSLIGDYNSGYTSGAFGRLIRMDHPDLMKQIRIIWQSPLIPNGPILVSNNLPADFKAKVVAAIKKLDKEDHSCFVKAVGGAQHIGAASVADYQNIIDMKRDLMKGARG
>NZ_CP045216.1|WP_152390698.1|1539772_1540636_+|phosphonate-ABC-transporter,-permease-protein-PhnE
MTDFEHYYQRIRRQQKRDTLLWSLLLVALYLAAGNVAEFNLVTVWQSLPHFFDYIGATLPVLHLPLLFADVKTEGSLAYWGYRLHFQLPLIWETLQLALSSTLIAVLIAAVLAFFAADNTQSPRSLRMAIRAFVAFLRTMPELAWAVMFVMAFGIGAIPGFLALALHTIGSLTKLFYESIESASDKPVRGLAACGASKLQRMRFAFWPQVKPTFLSYSFMRLEINFRSSTILGLVGAGGIGQELMTNIKLDRYDQVSMTLLLIIVVVSLLDTLSGWLRRRVVEGDVK
>NZ_CP045216.1|WP_058757355.1|1540632_1541517_+|phosphonate-ABC-transporter,-permease-protein-PhnE
MIALAPDVAKLKQQHAALFAAQNRYLRRIALIALALVLYYLFFFSVFGIDWQRFVIGCQQLGRYFLRMFVWQDFVNWPFGYYFSQVGITLAIVFAGTLTATVIALPVSFLAARNVMHDPLTRPISLLVRRLLDVLRGIDMAIWGLIFVRAVGMGPLAGVLAIVMQDIGLLGKLYAEGHEAVERSPSRGLSAVGANSLQKHRYGIFTQSFPTFLALSLYQIESNTRSAAVLGFVGAGGVGLVYAENMRLWNWDVVMFLTVILVVVVMVMDAISSRLRKRYITGKGVPLWQPAARD
>NZ_CP045216.1|WP_152390699.1|1541470_1544056_-|response-regulator
MSHSLHWHAGARGRLLMFNLLVVSVTLAVSLVAIFGFRHAGHIQEQAQAQTLADMNGSLALARDTANVAIAAVRLAQVVGALEYQSESARLQQTQQALQQSLSQLASAPLAAQQPALLARIRERSRMLEQSISQLLLEGHQRHLQRNVMLSGLWQAQLLLNRIDLLASDSAFLPLRQQTAALLTVAIQSATPQAAVQQLNSVLPIWSALPLQGVLAMQRARLVSTSQQLLPVAGQLEQSDIAIAYATYRIKALVAMLNEDITHYVQLVAQQSDARSATAHQELDSIIGFIGLFMLLALLITGYAGYYIYRNLGSSLTAIAHAMTRLAQGEKSVSVPGLARRDELGDLARAFNVFARNTASLAHTSQLLKEKSNQLESTFLAMRDGFALFDNSGQLVVWNAQYAELLGFAPRELHRGMHYQCLLDRVDVQLSSLHDAQEVRLPDGRTLELRFSPVPRRGMVNTVLERTSRKALEAALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLALTVDQLPPGTLASRIERARLAADRAAQLTQRLLAFSRKQALYPRAVAVVELVENLQSLLQHSLLPGQHLVVDAQRPGWPAWIDAGQLENALMNLVVNARDAMERQSGEIRLRIWNQRIQEADGKRDRVTIEVIDHGCGMSAEVREQVFEPFFTTKATGSGSGLGLSMVYGFVRQSGGQIELETAPGQGTTVRLLLPRAPEAAQPLVSAPVLTPRASRDRLILVLDDEPAVRQTLCEHLHQLGYLTLECADGESALTLLRQTPDIDLLISDLMLPGALNGADVIRQAQQQWPQLATLLISGQDLRQTPVTLPLCERLAKPWQQAQLVQALERAWQRSERLSRARQAATAAPLSR
>NZ_CP045216.1|WP_152390700.1|1544200_1545706_+|ATP-binding-cassette-domain-containing-protein
MAATPILEMRAITRRFGSFYALKGVDLTVWPGEVHALMGENGAGKSTLMKILAGAYTASSGEILIDGQPYAIRGPKEALAAGITLIYQEINLAPNLTVAENIFLGSEISRGGLVKRRQMAEEAQQVINRLGAQFSATDLVSRLSIAEQQQVEIARALHRNSRILVMDEPTAALSNRETEQLFALIKRLRSEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTREQLNASELVRMMVGRPLSDLFNKDRAISFGEIRLAVNHLTDNRKVHPSSLAVRAGEIVGLAGLVGAGRSELAQLIFGVHQPAGGEIWIDGEKVQIHSPRDAIARGIGFLTENRKEQGLFLELAAQENIVMATLERDASYGLLNRRKGQKIASEAIQSLNIRVPHAQVRAGGLSGGNQQKLLISRWVSIAPRILILDEPTRGVDVGAKSEIYRMMNQMAQQGVAILMISSELPEVVGMSDRVYVMREGTIAGELSGEQISQENIMTLATGAQPGQA

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Crispr_ID: NZ_CP045216_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_7

1792535-1792652

Orphan

Consensus_repeat	Method
TCGTAGCGGCGCGATTTATCGCGCGAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_7

>merge|NZ_CP045216|7|1792535-1792652|CRISPRCasFinder
TCGTAGCGGCGCGATTTATCGCGCGAATCTGGCCACCGCGCTGTTGTAAATTGTGCGATGAATTGCACTGCTTACGGTCACAGCACAGCTCGTAGCGGCGCGATTTATCGCGCTAATC

>NZ_CP045216|7|7|1792535-1792652|CRISPRCasFinder
TCGTAGCGGCGCGATTTATCGCGCGAATC	TGGCCACCGCGCTGTTGTAAATTGTGCGATGAATTGCACTGCTTACGGTCACAGCACAGC
TCGTAGCGGCGCGATTTATCGCGCTAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_152391531.1\|1798555_1799470_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
NZ_CP045216.1\|WP_152390782.1\|1793704_1794544_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP045216.1\|WP_152390787.1\|1799512_1799968_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184854
NZ_CP045216.1\|WP_152390789.1\|1802401_1803901_-\|UbiD-family-decarboxylase	unknown	unknown	gnl\|CDD\|376697
NZ_CP045216.1\|WP_058776360.1\|1787640_1789086_+\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917
NZ_CP045216.1\|WP_152390788.1\|1800851_1802405_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP045216.1\|WP_152390777.1\|1782728_1783613_+\|4-deoxy-4-formamido-L-arabinose--phosphoundecaprenol-deformylase	unknown	unknown	gnl\|CDD\|185292
NZ_CP045216.1\|WP_152390778.1\|1785979_1787323_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP045216.1\|WP_058770196.1\|1790086_1791097_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP045216.1\|WP_152390781.1\|1792708_1793605_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187572
NZ_CP045216.1\|WP_152390785.1\|1796747_1797662_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187632
NZ_CP045216.1\|WP_058781501.1\|1785613_1785976_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235094
NZ_CP045216.1\|WP_152391530.1\|1783644_1785300_+\|lipid-IV(A)-4-amino-4-deoxy-L-arabinosyltransferase	unknown	unknown	gnl\|CDD\|237330
NZ_CP045216.1\|WP_152390779.1\|1789233_1790055_+\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|226615
NZ_CP045216.1\|WP_152390784.1\|1795286_1796387_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|239242
NZ_CP045216.1\|WP_152390783.1\|1794733_1795147_-\|hydroxyisourate-hydrolase	unknown	unknown	gnl\|CDD\|274364
NZ_CP045216.1\|WP_021509383.1\|1785296_1785617_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|185011
NZ_CP045216.1\|WP_152390786.1\|1797698_1798436_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|171821
NZ_CP045216.1\|WP_058759134.1\|1780752_1782732_+\|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA	unknown	unknown	gnl\|CDD\|236156
NZ_CP045216.1\|WP_152390780.1\|1791254_1792493_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182492

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_152391531.1\|1798555_1799470_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.23674e-93
NZ_CP045216.1\|WP_152390782.1\|1793704_1794544_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	4.5658e-46
NZ_CP045216.1\|WP_152390787.1\|1799512_1799968_-\|hypothetical-protein	gnl\|CDD\|184854	PRK14852, PRK14852, hypothetical protein; Provisional.	3.17043e-10
NZ_CP045216.1\|WP_152390789.1\|1802401_1803901_-\|UbiD-family-decarboxylase	gnl\|CDD\|376697	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. This family has been characterized as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes. This enzyme catalyzes the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+.	1.74116e-146
NZ_CP045216.1\|WP_058776360.1\|1787640_1789086_+\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.09524e-152
NZ_CP045216.1\|WP_152390788.1\|1800851_1802405_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.61365e-54
NZ_CP045216.1\|WP_152390777.1\|1782728_1783613_+\|4-deoxy-4-formamido-L-arabinose--phosphoundecaprenol-deformylase	gnl\|CDD\|185292	PRK15394, PRK15394, 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional.	0
NZ_CP045216.1\|WP_152390778.1\|1785979_1787323_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.60078e-168
NZ_CP045216.1\|WP_058770196.1\|1790086_1791097_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.97295e-59
NZ_CP045216.1\|WP_152390781.1\|1792708_1793605_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187572	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7. This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.48938e-110
NZ_CP045216.1\|WP_152390785.1\|1796747_1797662_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187632	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. 17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.88885e-80
NZ_CP045216.1\|WP_058781501.1\|1785613_1785976_+\|hypothetical-protein	gnl\|CDD\|235094	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional.	1.91537e-31
NZ_CP045216.1\|WP_152391530.1\|1783644_1785300_+\|lipid-IV(A)-4-amino-4-deoxy-L-arabinosyltransferase	gnl\|CDD\|237330	PRK13279, arnT, lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.	0
NZ_CP045216.1\|WP_152390779.1\|1789233_1790055_+\|TIM-barrel-protein	gnl\|CDD\|226615	COG4130, COG4130, Predicted sugar epimerase [Carbohydrate transport and metabolism].	4.8642e-100
NZ_CP045216.1\|WP_152390784.1\|1795286_1796387_-\|oxidoreductase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	0
NZ_CP045216.1\|WP_152390783.1\|1794733_1795147_-\|hydroxyisourate-hydrolase	gnl\|CDD\|274364	TIGR02962, Probable_5-hydroxyisourate_hydrolase_R09H10.3, hydroxyisourate hydrolase. Members of this family, hydroxyisourate hydrolase, represent a distinct clade of transthyretin-related proteins. Bacterial members typically are encoded next to ureidoglycolate hydrolase and often near either xanthine dehydrogenase or xanthine/uracil permease genes and have been demonstrated to have hydroxyisourate hydrolase activity. In eukaryotes, a clade separate from the transthyretins (a family of thyroid-hormone binding proteins) has also been shown to have HIU hydrolase activity in urate catabolizing organisms. Transthyretin, then, would appear to be the recently diverged paralog of the more ancient HIUH family. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	2.32038e-58
NZ_CP045216.1\|WP_021509383.1\|1785296_1785617_+\|EamA-family-transporter	gnl\|CDD\|185011	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional.	7.32693e-24
NZ_CP045216.1\|WP_152390786.1\|1797698_1798436_-\|SDR-family-oxidoreductase	gnl\|CDD\|171821	PRK12937, PRK12937, short chain dehydrogenase; Provisional.	4.5569e-118
NZ_CP045216.1\|WP_058759134.1\|1780752_1782732_+\|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA	gnl\|CDD\|236156	PRK08125, PRK08125, bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA.	0
NZ_CP045216.1\|WP_152390780.1\|1791254_1792493_+\|amino-acid-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	4.24133e-141

>NZ_CP045216.1|WP_152390780.1|1791254_1792493_+|amino-acid-permease
MTESVMARRQPSVWWGAMIICGTVVGAGMFTLPIVMAGAWFGWALLLLGISWGAMLLSGLLFMRVSLHYPPGAGYDTLTRDLLGRGWASINGLSILFVLGILTYAYISASGPVYQHSLNQLGVPLSTAGAKITLTLCVAAVVWLGTTGVSRLMTFCVLAKILLLILLFGGLLTQVDVPSLFAAAAPGDSYWPYALGVLPFCLASFGYHGNITGLVSYYQRRESPVTRALVLGTLMSLALYLFWIVCTMGNLPRAAFPDIVQQGGDIAALMAALRDHLHVRALSLMMSVFSHFAVIASFLGVTAGLFDFIADRLGWGHSPRARLQTACLTFLPPLLASLWWPHGFVAAIGFAGLFATLWAVIIPALLARRAQQRFADRPRTPLAIGLVLLFGVLNVLAWTLSWLGVLPQFAAA
>NZ_CP045216.1|WP_058770196.1|1790086_1791097_+|Gfo/Idh/MocA-family-oxidoreductase
MTLNIGVIGTGAIGREHIRRCSQVLQHARVVALNDINRNNCEQVISELGLQAEIYDNAHDLIAAPEVQAILVTSWGPTHEEFVLAAIKAGKAVFCEKPLAVTAQGCMNIVEAEIAAGKKLVQVGFMRPYDSGYRALKAVIDGGTLGEPLMLHCAHRNPAVGDAYTTDMAITDTLIHELDVLRWLLNDDYVSAQVIYPRKTRHASSHLKDPQIVLLETAKGIRIDVEIFVNCAYGYDIQCEVVGESGIARLPEPMSVQTRHAAQLSTGILTDWKKRFIAAYDVELQDFINNVLSGNMTGPSAWDGYAAAVAADACVAAQNNGDIVPITMPPRPAFYR
>NZ_CP045216.1|WP_152390779.1|1789233_1790055_+|TIM-barrel-protein
MTYKISSDRFCVNRKIAPHLSMAEFFALVEQLGLNKVEIRNDMKSGSVTDGAGGEEVRRLAAQHQLEIETINAVYPFNQLDDAVLEKTRALLADARATGAKALVLCPLNDGTPVSNEQTVQALQTLAPLFAEYGVAGLVEPLGFPQSSLRSAALAQQLIAQAGVPFNIVLDTFHHHLYEGAEQDFAGGVDVNHIGLVHLSGVTDARPTHQLTDEERIMLSADDLLKSREQVQRLEEMGYRGVYAFEPFSSVMESWNAEDIAREIRSSIDYLNH
>NZ_CP045216.1|WP_058776360.1|1787640_1789086_+|sugar-porter-family-MFS-transporter
MEKELYLSTNTASGPNSTTKTEPFVKIIALVATLGGLLFGYDTGVVSGALLFMRSDLDLTPFTTGLVTSSLLFGAAFGALLAGHFADALGRRKIIITLAFIFALGAVGSAFAPDVVTMIASRLFLGIAVGGAAATVPVYIAEIAPANKRGQLVTLQELMIVSGQLLAYVSNATFNEIWGGEHTWRWMLAISTVPAVLLWIGMIFMPESPRWHVMRGNTAGARRVLEKTRAAEDVEWELEEIEETIEEHRQQGKGRLRDLRTPWLRKVFLLGIGIAAIQQLTGVNTIMYYAPTMLTATGLSNDAALFATIANGVISVIMTLVGIVIIGKVGRRPLVLIGQMGCTACLFFIATVCLLMPEYHAGGAVNLLRAYLVLAGMLMFLCFQQGALSPVTWLLLSEIFPARMRGICMGGAVFALWIANFAISMAFPLLLAAFGLAGAFLTFAVIGIGGALFVLRAIPETKGRSLEQVEHYFYELYDGKG
>NZ_CP045216.1|WP_152390778.1|1785979_1787323_-|MFS-transporter
MASSTVAQSDTAEAHPKSLIRRVASASAIGTAAEYYDFFAYGTAAVLFFGHLFFPSHDPLVSTLAAFATYAVGFLARPIGGMVFGHIGDKVGRKKALVATILIVGLGTFCIGLLPTYEKIGVWAPILLIAIRLLQGFGVGGEQAGAVLMTAEYAQPSRRGFFASWVQIGAPVGFLLPLALFAVLNAALTAEQMMDWGWRVPFLLSALLVIVGLFIRLRIDESPVFAAIRETKAAESRPLKEVLRGNPRLVVNGVAAKLIEACAFALFTVIILAWGKANQLDAGILMNSMIVAVILEVLAIPLMGALSDRIGRKPVYLIGTLLIMLSIVPFFLALAHNSYWLTQLAMIVALTLGHSMCYAPQASWFPELFPTHIRCSGIAVIWQIGSLIGSGVLGLVAVKILQVTHGHWYGLALYVAVLGVISLFGLLRLPETAPGRRQGEYHPWQQH
>NZ_CP045216.1|WP_058781501.1|1785613_1785976_+|hypothetical-protein
MKGWLLALASVLLVSLAQLLLRTAMLALPPLDTWTALPWQHGLIPLIGGLAAYGCSMLCWLLALRLLPLNRLYPLLSLSYVLVWLAAISLPALHETFRWSSLAGVILIVCGLLCVALPRR
>NZ_CP045216.1|WP_021509383.1|1785296_1785617_+|EamA-family-transporter
MNLLLILLVSLLSCAAQLCQKQAAHCGGHRLFGWLVLSLLLLGTAMLLWLVVLRTVPVSVAYPMLSLNFVLVAVAARVIWRETYTRRQWLGTLAIVAGVALMGSHL
>NZ_CP045216.1|WP_152391530.1|1783644_1785300_+|lipid-IV(A)-4-amino-4-deoxy-L-arabinosyltransferase
MRSRTRIVLLIALFALYYLIPVPFRDLWQPDETRYAEISREMLLSGNWVVPHFFDLRYFEKPIAGYWVNNLGQLLFGHNNFGVRAGAIICTTLCAMLIYWLGKRMFASRKIALTASVIFLTSLLVYGIGTYAVLDPILLLWLVAAMCSFWFAAQAHSTSQRLTGYVLLGAACAMGFMTKGFLALAVPVLAIVPWVLWQRRFGELLRWGPLTVLVAAAISAPWALSIQHQEGDFWHYFFWVEHIQRFAESDAQHKAPFWYYLPVLVAGCLPWLGLLPGALSGAWRQRQQHAAAIYLLSWVVLPLLFFSIAKGKLPTYILPCFAPLALLMAHYAHGNTARLKQALVVNGWINLLFGLVATLLVVVVLAPWGLAHHPVYARDELLRVLCAALAFAGWAVMGWLSLKTGRWQLAALCPLALALLVGLAIPQKVRDSKQPQSFVSAVRPQLAQSRYLVVDNSGIASAVAWELRRSDITFFDEKGELEYGLGYPDAKTRYVDGEAFADWLRLHRRQGPVALVLLLNSDEKQADAHLPVPDDVYQQGRLVYYGYNATP
>NZ_CP045216.1|WP_152390777.1|1782728_1783613_+|4-deoxy-4-formamido-L-arabinose--phosphoundecaprenol-deformylase
MKRVGLRVDVDTWRGTQLGVPALLQQFSLHQLQASFFFSVGPDNMGRHLWRLMKPRFLWKMLRSRAASLYGWDILLAGTAWPGREIGKGLASIIRATADHHEVGLHAWDHFAWQTWAGVWSPQQLNAQIARGKAALEAILGDSVTCSAVAGWRADSRVLDAKQPFGFRYNSDCRGSGPFIPRLNDGSLGTVQIPVTLPTWDEVVGQQVSAEGFNDFILAQMHAASGTPVYTIHAEVEGIVGLPAFADLLTRAQQQGIRFCPLSELLPDNLSTLPQGHVVRGHIAGREGWLGCQS
>NZ_CP045216.1|WP_058759134.1|1780752_1782732_+|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA
MKTIVFAYAEMGCAGITALLNAGYEISAIFTHADTSPESHAFPSVARLAAEQGIPVYAPEDANHPLWVDRIRTMQPDFIFSFYYRALLSDTILNCARVGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGDIVAQQRVAIDPQDNALTLHRKLVACAGQLLEGALPPMKRGEIAATPQNDAEATVVGRRTPEDGRINWELPAAKVNNLVRAVTDPWPGAFAYAGTVKFVVWKGRVHQDAPSAKPGTVLSVEPFLIACGEGALEVVTGQSDNGVYMNGSQLAQSLGMVPGALLYSQPVAAVKRRTRVLILGVNGFIGNHLTERLLQDDNFEVYGLDIGSDAISRFLDEPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPSTSEVYGMCTDQHFDEDHSNLVVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGAQKRCFTDIRDGIEALFRIIENKHNNCDGQIVNIGNPENEASIKELAEHLLASFERHPLRDRFPPFAGFREVESSSYYGKGYQDVEHRKPSIKNARRLLDWTPTVAMDTTIDNTLDFFLRTVELQEKP
>NZ_CP045216.1|WP_152390781.1|1792708_1793605_-|NAD-dependent-epimerase/dehydratase-family-protein
MRIFITGATGFIGSRVVSALLARGHQVTGLVRSEEAAQQLNDKGATAQRGTLEDPQAWIAGIEQCDAVIHTAFDHDFSRFVDNCEKDRRVIRAIGSVLQGSQRPLLITSGTGMGDDGSGQPALEQNFNPAHPNPRVASEMEGIKLLESGIDLRVVRLPQVHNTERQGLISYYIALAREKGAAAYIGGGENAWCAAHVDDVAGLYVKVLEQGERGKRYHAVAEESIASRLIAETVAAGLGIPAVSLKPDQAAEHFGWFAAFARLDLRASGAWTRQQLNWQPKGPGLIADLSRANYSTQS
>NZ_CP045216.1|WP_152390782.1|1793704_1794544_+|helix-turn-helix-domain-containing-protein
MTLLSENPLGEFLRARRLAIDPASFGFLPGRRRTPGLRREEVAQLANISPTWYTWLEQGRGGAPSREVLNRIAAGLRLTSPERDHLFILAFGHPPENRVSRSDSITPRLQRVLESLTIPAIIKTATWDVVAWNHPATVVLKDYGQLPPARRNILRLLFTDQEARGMQDDWEGVARLIVNAFRADAARLGASEEIDRLVEELSAQSSDFARLWRNNDVAGHGEGFKVLHHPQMGTIALEFSTFSVEGRPDLTMMLFNPATDESRAKTERWISQNSAQRVV
>NZ_CP045216.1|WP_152390783.1|1794733_1795147_-|hydroxyisourate-hydrolase
MKLQHYLLGGALCAFSVSGLAAEMKNPLSVHVLNLETGVPTAGIEVELDKKQGEEWVKLAQGTTNEQGRIPALYPAGQKAQTGIYRVVFKTGDYYKKNSQPTFFPEIPVMFNLDNADQHYHIPLLLSQYGYSTYRGN
>NZ_CP045216.1|WP_152390784.1|1795286_1796387_-|oxidoreductase
MSLLFSATQLGELSLENRIVIAPMCQYSAEEGKATAWHRIHLGQLALSGAGLLIIEATAVEAIGRITPGDLGLWDDATEAALASVLQDVRRYATLPIGIQLGHAGRKASCAAPWQGGAQLSEEHSGWQTVAPSAQPFGQDERPPAALSKQDLAQLKQAFVDSALRAVRIGIQLVELHAAHGYLLHQFLSPLSNQRDDEYGGSLENRLRFPLEVFKALRAALPAEIPVGVRLSATDWIEGGWDNQQSIVFSQQLEAAGCAYIHVSSGGLAPQQQISVGPGYQLPFAREIRQQVSIPVIGVGLITEPKQAEQALQEQDADLIALARAVLYDPRWPWHAAAELGAQAKAPPQYLRSEPHGLKGTLISNQ
>NZ_CP045216.1|WP_152390785.1|1796747_1797662_-|SDR-family-NAD(P)-dependent-oxidoreductase
MSQKIILVTGSSSGFGRMTAEALARAGHTVYASMRDIAGRNATNVRQLSELSTREGIDLRPLELDVQSDISVDAAIETVISAAGKLDVVVHNAGHMMFGPAEAFTPEQFAQQYDVNVLGTQRVNRAILPHMRSRREGLLVWISSSSVTGGTPPYLAPYFAAKAAMDTLAVQYTRELSRFGIETTIIVPGAFTKGTNHFAHSGSPADTGRVAEYEAGPYAGFGDVVQKTFAGIVPKDADPARVAAQITDVVGMPFGTRPFRVHNDPSEDGANIGFAVIDRLRAEMLHRVGLSDLLTPAKAPSCEG
>NZ_CP045216.1|WP_152390786.1|1797698_1798436_-|SDR-family-oxidoreductase
MSTSEKVAIVTGASRGIGAAIARQLAADGFAIVVNYAGNAEAAAAVVEEIEAAGGRAITAQADVADASQVKRMFDLAESAFGGIDVLVNNAGVMMLSPLASADDQSFTKQIDINLKGTFNTLREAANRLRSGGRIINFSTSVVGLKLENYGVYAATKAAVETLTTIMSKEMRGRSITVNAVAPGPTATDLFLNGKSDELIARMSKMNPLERLGTPEDIASVVSFLAGPQGSWMNGQILRANGGMV
>NZ_CP045216.1|WP_152391531.1|1798555_1799470_+|LysR-family-transcriptional-regulator
MDRIDTMRVFTRVVARRSFTRAAEDLGLPRSTVTDAIKQLESRLGIKLLERTTRHVSPTLDGEAYYKRCVSILDDIEDAEGAFAGARPKGLLRVDVHGTLARHFVLPHLPCYLEAYPDIEIYLSEGDRLVDLVREGIDCVLRVGTPQDSDMIARCVATLEEVTVASPGYVSRFGLPSDPDELHSGHRMIGFRTTGSSGILPLAFRVDGKRITTTIKTSITVNAADTFVSVARMGLGIIQVPRYHVEDDLKTGALVELLKAFPPEPSPVSVLYPRNRQLSPRVRVFIEWLKDLFLQHDVDSNAGK
>NZ_CP045216.1|WP_152390787.1|1799512_1799968_-|hypothetical-protein
MAALQLEKRKVVELGTLSVRYQADSENIVFMLYLKIMIYTIFIEQVDDIFIQVKEKVAAFYERNFLFKQVGGTKKHPDYSDLNAALLRVDVKSIRDKIYEQQCYGPMGWLRMLRELGLLQHYRTLSQQCHRCPRFTPDQRDAELYQYLCNL
>NZ_CP045216.1|WP_152390788.1|1800851_1802405_+|diguanylate-cyclase
MTFKRKNEAAIISGSSLLRSILLSGGLLICAIIALTLWTLREDWHGAVRQTEEMAVNLSLSQSRQAEDTVLQTELALREVQRDLQAQPLEKLNAANLSQIMRDLQSRLPQLHGLFYYDEQGRWIATSTRSVPVGTNNSDREYFRYHRNNSRDSLHIGPVIRSRSTGDLVIPVSLRVSDAARDFKGILLATIKVDYFRRFYSYYELGPRDVLVLMLADSTVLYARPMPDSYIGKSLSASHLFQQMLVKADRGSGEWNAALDGQVRIFGFASSERYPLVVAAGYDKRNLYLRWVKGRLQDISLNVALLVAIILLGLFVIRQARHSQHYQEALLKLKNDLADANHHLDQLAFFDGLTGLANRRQFDRFLQNALHHLREKSAPVSLILMDIDYFKHYNDRYGHVAGDHCLRQVADALKRLKLRQSDMVARYGGEEFAIILAGADQHAALNIARQAVQAIADLHMPHAASALPDAQVTLSAGCATTWHDDQAGNLIEHADAALYQAKHSGRNQAQAWRAVSD
>NZ_CP045216.1|WP_152390789.1|1802401_1803901_-|UbiD-family-decarboxylase
MSNTSPSSHSSEVYDLRSAIELLKQFDGEYIETDEPVNPEAELSGVYRYVGAGGTVMRPTQAGPAMVFNHIKGYDNFRVLIGLLASRQRVARLLGVPKEKLAHLLRSSVHNAIAPVEISQQQAVCQEVVHLATDDGFDIRRLLPAPTNTPEDAGPYFTMGMCYAADPETGEHDVTIHRLCVQGKDEISMYFVPGRHLDQFRIKAEQAGKALPITISIGVDPAIEIGACFEPPTTPLGFDELAIAGGLRGRAVELVKGVAVEARAIANAEIVIEGELVPDYRVQEDQHTHSGKAMPEFPGYTGEAQAAVPVIKVKAVTHRKNPILQTCIGPSDEHTNLAGIPTEASILDMVERALPGLVKNVHCPSPGTGKYVAVLQINKRGPQDEGRQRQAALLAFSAFSELKHVFLVDEDVDVFDLNDVIWAMTTRYQGDADTIFIPGVRCHPLDPSQDPAFSNSIRAHGITCKTIFDCTVPYDLKHNFQRSQFMEVDVSRFIPGFNR

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Crispr_ID: NZ_CP045216_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_8

3890853-3890916

Orphan

Consensus_repeat	Method
GATGTTGCCGCTGTTGCTGGCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_8

>merge|NZ_CP045216|8|3890853-3890916|CRISPRCasFinder
GAGGTTGGCGCTGTTGAGGCTGCTGCCGCTGCCGGAGACAATCACGCCGGTGCTGCTGGCGGCG

>NZ_CP045216|8|8|3890853-3890916|CRISPRCasFinder
GAGGTTGGCGCTGTTGAGGCTGCT	GCCGCTGCCGGAGAC
AATCACGCCGGTGCTGCTGGCGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_021507820.1\|3896862_3898164_-\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
NZ_CP045216.1\|WP_058774916.1\|3874381_3875701_-\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NZ_CP045216.1\|WP_127833570.1\|3903694_3904297_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284781
NZ_CP045216.1\|WP_021507815.1\|3884706_3885663_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378976
NZ_CP045216.1\|WP_058757539.1\|3883416_3884604_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|182309
NZ_CP045216.1\|WP_152391416.1\|3895801_3896713_-\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP045216.1\|WP_152391411.1\|3879886_3881527_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274097
NZ_CP045216.1\|WP_021313201.1\|3900873_3901203_+\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_CP045216.1\|WP_152391418.1\|3904322_3905018_-\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|224265
NZ_CP045216.1\|WP_058774926.1\|3898744_3900700_+\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP045216.1\|WP_152391410.1\|3878531_3879767_+\|peptide-antibiotic-transporter-SbmA	unknown	unknown	gnl\|CDD\|182960
NZ_CP045216.1\|WP_152391414.1\|3885666_3887211_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP045216.1\|WP_136546466.1\|3894028_3894268_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_021507807.1\|3875712_3877497_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP045216.1\|WP_058780874.1\|3877499_3878237_-\|gluconate-2-dehydrogenase-subunit-3-family-protein	unknown	unknown	gnl\|CDD\|379295
NZ_CP045216.1\|WP_152391417.1\|3903009_3903555_-\|porin	unknown	unknown	gnl\|CDD\|284781
NZ_CP045216.1\|WP_058774923.1\|3894362_3895802_-\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|181971
NZ_CP045216.1\|WP_152391413.1\|3882915_3883125_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NZ_CP045216.1\|WP_152391412.1\|3881681_3882704_-\|YncE-family-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP045216.1\|WP_021507822.1\|3901199_3902852_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|236495

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_021507820.1\|3896862_3898164_-\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
NZ_CP045216.1\|WP_058774916.1\|3874381_3875701_-\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	8.94608e-11
NZ_CP045216.1\|WP_127833570.1\|3903694_3904297_-\|hypothetical-protein	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	7.75461e-09
NZ_CP045216.1\|WP_021507815.1\|3884706_3885663_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	6.20497e-30
NZ_CP045216.1\|WP_058757539.1\|3883416_3884604_-\|MFS-transporter	gnl\|CDD\|182309	PRK10213, nepI, purine ribonucleoside efflux pump NepI.	2.78599e-111
NZ_CP045216.1\|WP_152391416.1\|3895801_3896713_-\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	4.19825e-178
NZ_CP045216.1\|WP_152391411.1\|3879886_3881527_-\|DAK2-domain-containing-protein	gnl\|CDD\|274097	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent. This family consists of examples of the form of dihydroxyacetone kinase (also called glycerone kinase) that uses ATP (2.7.1.29) as the phosphate donor, rather than a phosphoprotein as in E. coli. This form is composed of a single chain with separable domains homologous to the K and L subunits of the E. coli enzyme, and is found in yeasts and other eukaryotes and in some bacteria, including Citrobacter freundii. The member from tomato has been shown to phosphorylate dihydroxyacetone, 3,4-dihydroxy-2-butanone, and some other aldoses and ketoses ().	0
NZ_CP045216.1\|WP_021313201.1\|3900873_3901203_+\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	8.2094e-43
NZ_CP045216.1\|WP_152391418.1\|3904322_3905018_-\|LrgB-family-protein	gnl\|CDD\|224265	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane].	1.62458e-86
NZ_CP045216.1\|WP_058774926.1\|3898744_3900700_+\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP045216.1\|WP_152391410.1\|3878531_3879767_+\|peptide-antibiotic-transporter-SbmA	gnl\|CDD\|182960	PRK11098, PRK11098, peptide antibiotic transporter SbmA.	0
NZ_CP045216.1\|WP_152391414.1\|3885666_3887211_-\|PAS-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	4.19827e-80
NZ_CP045216.1\|WP_021507807.1\|3875712_3877497_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.3881e-82
NZ_CP045216.1\|WP_058780874.1\|3877499_3878237_-\|gluconate-2-dehydrogenase-subunit-3-family-protein	gnl\|CDD\|379295	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3. This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.	2.00717e-43
NZ_CP045216.1\|WP_152391417.1\|3903009_3903555_-\|porin	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	2.12291e-42
NZ_CP045216.1\|WP_058774923.1\|3894362_3895802_-\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	gnl\|CDD\|181971	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed.	0
NZ_CP045216.1\|WP_152391413.1\|3882915_3883125_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	0.000139638
NZ_CP045216.1\|WP_152391412.1\|3881681_3882704_-\|YncE-family-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	5.96106e-27
NZ_CP045216.1\|WP_021507822.1\|3901199_3902852_+\|cation-acetate-symporter	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0

>NZ_CP045216.1|WP_152391414.1|3885666_3887211_-|PAS-domain-containing-protein
MRNNQPITQREFVFDDRATLMSTTDLNSHITYANDAFIEVSGFTPEEVNGQPHNMVRHPDMPPEAFADMWSTLKQGEPWTALVKNRRKNGDHYWVRANAIPVVREGKLQGYMSVRTKPSAEEVRQCETLYRDFREGRAKGRRFHKGLIVGSGWRRLTSVLKTLPLRWRIRSTLIALLPLSILGVWLLGMAPLAIGCFSGGMAGLLLLASLWLEQQISRPMERMCRQALSVATGASHKVEHIDRVDEIGMTQRAIGQLGLMFRWLVDDVSGQAINVLSASDAIARSNDELSRRTEQAAANVQQTAATMNEMTATVKSNTETASEVNTLSASTSAAAIKGGEVMQEMVGMMAEIADSSKRIANITSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSAKAASEIKNLVETSAGRVQSGRDHADAAGHTMQAIVDQVQNVTALIAQISAATAEQSIALSEVSSAVEDLDDITHQNAARVAEGAEASGRMAHQANRLVEAISVFR
>NZ_CP045216.1|WP_021507815.1|3884706_3885663_+|AraC-family-transcriptional-regulator
MSRYEDLTSELLMGMRLYGVKYQRIALHAPFGLQYDDAPGKAQLHFVGRGSLLIRSASGTVYPLQAGDALLIPHGKPHALISGEDAVCVPIATFNSKPICDSVCAINDAPDADACPDDSDVILFSACMAFELGGMQPLVHTMPDVMLVSTLLAQYPEIQPILDAMERETRQRKAGFAGILSRLADVVAAQIVRGWVENGCGQGSGLVQALRDPRLSLAMAAMHRAPGENWTVERLARESGSSRSVFAARFQNATGMTPLRYLTELRMRLAVERIVNDGEAVESVAFHLGYGSLAAFSRAFKRIVGTPPGALRAGREAS
>NZ_CP045216.1|WP_058757539.1|3883416_3884604_-|MFS-transporter
MSLDTEVVETSIAVEKPAWGAVFAMAFGVFGLITAEFLPVSLLTPIADSLRVSEGQAGQTVTVTALVALLTSLVIGNVTRRLDRRLVMLAFTLLLIASALLVAFAENLPMILLARVLLGMAIGGFWTLSTAITMRLVPADQVPRALSIVFSGISLATIIAAPLGSYLGGLIGWRNIFLLTGVLGVLALFWQFFTLPSMPPENKARSGGVLDLLRQSVMRWGMLAVIMMFTGHFAFFTYLRPFLETSAQLNVNQLSLVLLAFGVANFFGTSLAAWLVTRSVSLTLTGMALVMSVTAVLLVSFGHVSWLVASGVALWGLAFGSMPTGWSTWLSRAVPDDAESGGGLLVATIQLAITAGAAAGGWMFDLQGAGGVFLASGVLMLLAAITIFTRVRHHG
>NZ_CP045216.1|WP_152391413.1|3882915_3883125_-|DUF1471-domain-containing-protein
MKTIKTFAAVIALSVLSFASFAQSVTATASTLDGAEAQIAAKAQELGASYKVTEANFNNGVHMTAELTQ
>NZ_CP045216.1|WP_152391412.1|3881681_3882704_-|YncE-family-protein
MKANKTMQWALRPLLVATALLSCSALQAAETQPLNQPIAKGAYELAFSNSDNALFLATAQNAGNPQGGTVYRLDPQNLAVKQTISTELKTFGAAINQHTNVLYFGNTVNGALTAVDASSGKVINTLVLDGRKRGDTVRPLQPRELVADALTNRVYITGLGAQSVVWVVDGKTLQLISTIPNTGKMGTGLALDAAAQKLYVTNADGELVTINTRLNAIEKRQKIDGDKEHFFLNIALDSKGHRAFLSDAKQPQVLVLDTRTQQVIQRIEVPESLAVLFNADRDELYVTHRKAGEISIIDASSYKVKRTVKAPGLPNSLALSADGNTLFVSIKQPGSRKEPP
>NZ_CP045216.1|WP_152391411.1|3879886_3881527_-|DAK2-domain-containing-protein
MSQFFMHEKNDLVNEAIEGVLLSTPWHNLTRLDLGDEIRVVVRSDWDKSKVALISGGGSGHEPAHAGFVGKGMLTAAVCGDIFASPSVDAVLNAIVNVTGEAGCLLIVKNYTGDRLNFGLAAEKAKNLGYKVELVMVQDDIALPENPQPRGIAGTVLVHKIAGFAAEHGQSLEEVKALAQRTIDATSSIGLAFATCHIPGEKRDDRVAAGHSELGMGIHGEPGVITLDTQNSRKITSIMTDQLAQALPDGKQALLMINNLGGFSQLELALLTREVLQSPLAARITHLIGPATLVSALDMKGFSLTLLALEEAFFEALHAPVQVLGWTPMYDFAPISLQRAERIGSVLDFDPSDNAEVAQVVERVTQTLIDLESELNALDAKVGDGDTGSTFAAGAKKIQRGLREQQLPLDELPTLLALVGEQLATVMGGSSGVLMSILFTSAGQQLEEGSTLPQALMHGLERMKHYGGAQPGHRTLVDALQPALEALAAGESLADAAAAAQQGADATAQMQSAKAGRSAYLNQQSLDGVKDPGAYAIEKVFAVLAG
>NZ_CP045216.1|WP_152391410.1|3878531_3879767_+|peptide-antibiotic-transporter-SbmA
MFKSYFPRPALFFSSAAIWSLIAIFAWFGFFNDFPARFPALQAAMQQPLPTNASRFIHASQLWFYAYYWIMGGAFALVWRIIDNHPWQRWSVWGSLLIIFVTWFGVQVGVGVNAWYGPFYDMIQQALTKAGSVSINQFYVQVLAFLGIALIAVVIGVMNSFFVSHWVFRWRTAMNNYYMHNWQRLRLVEGAAQRVQEDTMRFASTLQDWGISFIQAIMTLVAFLPVLVTLSHHVKEVPILGNIPYALVIAALLWSLFGTALLALVGIKLPGLEFRNQRVEAAYRKELVYGEDDPQRAAPPTVQELFSRVRHNYFRLYFHYLYFNITRILYLQVDNVFGLFVLFPSIVAGTITLGLLNQITNVFDQVRSSFQYLITSWSTLITLMSIYKRLRSFEQILQDIPHEEMLREASE
>NZ_CP045216.1|WP_058780874.1|3877499_3878237_-|gluconate-2-dehydrogenase-subunit-3-family-protein
MSEEKKGHTRRDFLLRTITLAPAMAVGSTAMGALVAPMAAGAAASSAAAPQQAREYQPVWFTAEEFAFIKAAVARLIPNDERGPGALEAGVPEFIDRQMNTPYATGSNWYMQGPFNPDLPKELGYQLPLVPQQIYRLGLADADGWSKQQHGKVFAELTPTQQDALLSAFENGSAQFPQVPAKTFFAFLLQNTREGYFSDPIHGGNQGMVGWKLIGFPGARADFMDWVERGERYPFPSVDIRGERA
>NZ_CP045216.1|WP_021507807.1|3875712_3877497_-|GMC-family-oxidoreductase
MANALKKVDVAIVGFGWAGAIMAKELTEAGLHVVALERGPHRDTYPDGSYPQSIDELTYNIRKKLFQDLSKSTVTIRHDASQTAVPYRQLAAFLPGTGTGGAGLHWSGVHFRVDPVELNLRSHYEQRYGKNFIPEGMTIQDFGVSYDELEPFFDQAEKVFGTSGSAWSIKGKVVGKEKGGNPYAPDRSSDFPLPAQKRTWSAQLFAQAAESVGYHPYDMPSANTSGPYTNTYGAQMGPCNFCGYCSGYACYMYSKASPNVNILPALRQEPKFELRNNAYVLRVNLTDDKKRATGVTYLDGQGREVEQPADLVILSAFQFHNVHLMLLSGIGKPYNPISNEGVVGRNFAYQNISTLKALFDKNTTTNPFIGAGGAGVAVDDYNADNFDHGPYGFVGGSPFWVNQAGTKPISGLPTPTGTPNWGSQWKAAVADTYNHHVSMDAHGAHQSYRANYLDLDPNYKDAYGQPLLRMTFDWQDNDIKMAQFMIGKMRKITEAMNPKMIIGGAKGPGAHFDTTVYQTTHMSGGAIMGEDPKTSAVNRYLQSWDVPNVFVAGASAFPQGLGYNPTGMVAALSYWSAKAIREQYLKNPGPLVQA
>NZ_CP045216.1|WP_058774916.1|3874381_3875701_-|cytochrome-c
MIKSLTALLLGTLSFAALAEDTAADALVQRGEYLARAGDCVACHSTAGGKPFAGGLPMATPIGTIYSTNITPDKATGIGDYSYDDFQKAVRHGVAKNGDTLYPAMPYPSYAVVSDDDMKALYAYFMHGVAPVAQANKESDIPWPLSMRWPLAIWRGLFAPDVKAFQPAAQEDPALARGRYLVEGLGHCGACHTPRSFTMQEKALNNGQGNDYLAGSSAPIDGWTASNLRGDNRDGLGRWSEADLQQFLRYGRNDHTAAFGGMTEVVQHSLQYLSDADISAIARYLKSLGAKDPSQAVFREDDAVARALWKGDDSQPGAGVYVDSCAACHKTDGSGYQRFYPALRGNPVVMAEDPTSLIHIVLVGGTLPGVQGAPTAITMPAFGWRLNDSQVADVVNFIRSSWGNGVQTKVTAKQVAKLRQDDSVQPKQGSADIRVLEKQ
>NZ_CP045216.1|WP_136546466.1|3894028_3894268_+|hypothetical-protein
MRENQEKAVAYIDFMAAQIKSEPGDIYQDEIRISQEMKGYNPGLNKAYSDNALISRDLSSATPVKSGRVIILTLNNKQR
>NZ_CP045216.1|WP_058774923.1|3894362_3895802_-|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC
MAAITESLLRDILQAVGGAGNVVHCGNCMTRLRLTLADAARVDSARLKTLPGVLGVIDSDAQLQIVLGPGKAQTAAEKMQAMLNSATPEAPGDLHSIASAQKQQMKAKQTSALHRFLSCFATIFTPLIPGFIGAGLLLGFATLIEQVCHLNQPGEHARWLLDTVAYMKVFGKGLFTFLSILIGYNAQKAFGGTGVNGAIIASLFVLGYVPNATVGYYSGMQDFFGLTIDPRGNIIGVLLAAIFGAWLEKQLRKIIPDNLDMILTSLLTLLITGAVTFLVIMPIGGELFKGMSWLFIHLNNNPFGCAILAGLFLIAVMFGIHQGFIPVYFALMETQGFNSLFPILAMAGAGQVGASLALWCKADKHSLLRSQIKGAIVPGLLGVGEPLIYGVTLPRLKPFITACFGGALGGFFIGLVAWLGLPVGMNTVFGPSGLVTLPLMTSSQGIFAGMAVYLVGLIVAWIGGFVFTWWGGTKNVDLS
>NZ_CP045216.1|WP_152391416.1|3895801_3896713_-|N-acetylmuramic-acid-6-phosphate-etherase
MNIDLSQMITEGRNPASQNIDELNTEAMLRVINDEDKKVALAVEAIVPQIGEVVDAITAAFSQGGRLIYCGAGTSGRLGILDASECPPTFGTPRSQVVGLIAGGHTAILQAVENAEDNREQGAQDLKDIDFSARDVLVGIAASGRTPYVLGALAWAKQQGAFTAALTCNPNSAMSQAADVALTPVVGPEVVTGSSRMKAGTAQKLVLNMLTTGAMIRSGKVYGNLMVDVEATNQKLVQRQINIVKQATECDDARAQQALAACGGHCKTAIVMILADLNADEAQALLAQNHGFIRQALHHAGAQ
>NZ_CP045216.1|WP_021507820.1|3896862_3898164_-|glutamate/aspartate:proton-symporter-GltP
MKGFKLTLAWQILIALILGVIVGTVLHNQPDDREWLITNILTPAGDIFIHLIKMIVVPIVISSLIVGIAGVGDAKKLGRIGVKTIIYFEVITTIAIVVGITLANVFQPGSGIDMSTLATVDISKYEATTEAVQGAPHGLVTTILSLIPQNIFASLVKGDMLPIIFFSVLFGMGLSALPSEHRDPLVTVFRSISETMFKVTHMIMRYAPVGVFALIAVTIANFGFASLYPLAKLVLLVYVAILFFAFVVLGAVARFCKLRITTLMRILKDELILAYSTSSSETVLPRIMQKMEAYGAPKAITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSLTDEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRIMDMARTALNVIGNALAVLVIARWENQFDTKQAAAYELQLRTQNAS
>NZ_CP045216.1|WP_058774926.1|3898744_3900700_+|acetate--CoA-ligase
MSQIHKHPVPAAIAANALINADQYAALYQQSVDDPEAFWGEQGKILDWMTPYSKVKNTSFAPGNISIRWYEDGALNLAANCLDRHLATRGDHPAIIWEGDDASESKTLTFRELHADVCRFANVLTGLGVKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRVVDSSAKLVITADEGVRAGRSIPLKKNVDDALNNPNVTSVKNVVVFQRTGKETGWREGRDLWWHELMAKASDQHQPVAVEAEHPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHDDDVYWCTADVGWITGHSYLIYGPLACGATTLMFEGVPNWPQPSRMAEVVDKHKVTLLYTAPTAIRALMAEGDKAIAGTQRSSLRIMGSVGEPINPEAWEWYYKKIGDSRCPIVDTWWQTETGGFMITPLPGATELKAGSATKPFFGVQPALVDNEGNTLDGATEGNLVIVDSWPGQARTLFGDHDRFEQTYFSTFKNRYFSGDGARRDDDGYYWITGRVDDVLNVSGHRLGTAEIESALVSHPKIAEAAVVGIPHSIKGQAIYAYITLNHGEEPSPELYSEVRNWVRKEIGPIATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNFGDTSTLADPGVVEKLLEEKQSITMP
>NZ_CP045216.1|WP_021313201.1|3900873_3901203_+|DUF485-domain-containing-protein
MNEALNQQEAVWQQIESNPRFQELVHKRQSFALLLSLIMLVLYVGFILLIAFAPGWLGTPLHAGTNVTRGIPIGVGLIVVSFLLTGVYVWRANGEFDRLTKQIVSEVKS
>NZ_CP045216.1|WP_021507822.1|3901199_3902852_+|cation-acetate-symporter
MKRLLSASLAIVPASVFAADAITGAVQKQATNYEAIIMFVVFVAATLGITYWASKRTRSRSDYYTAGGNITGFQNGLAMAGDFMSAASFLGISALVYTSGYDGLIYSLGFLVGWPMILFLIAERLRNLGRYTFADVASYRLQQKPIRTLSACGSLVVVALYLIAQMVGAGKLIQLLFGLDYHIAVVLVGILMVLYVLFGGMLATTWVQIIKAVLLLFGASFMAIMVMKATGFSFNTLFTEAMAVHPKGSAIMQPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVADAREARKSVFWATGFMGYFYFLTFIIGFGAILLVGANPAFKDASGALIGGTNMAAVHLSNAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIRKGQATEREELRVSKITVLVLGVVAIALGILFEKQNIAFMVGLAFSIAASCNFPIILLSMYWSKLTTRGAMVGGWLGLLTAVVLMILGPTIWVQVLGHATPVYPYEYPALFSMLVAFVGTWLFSITDHSQQGALERAKFRGQFIRSQTGVGISQGKAH
>NZ_CP045216.1|WP_152391417.1|3903009_3903555_-|porin
MFKQLVTGSVLGLALLSGGAQAIEGSVDVGEHSTNLNLGLGTASPGLFLKGNWLRSDHDGSTYGLGMGYNLDVGDFRVAPTAKALFTHPEDGRDGFTVALGAGAQYNFNSMWGLYGEYYYAPEAFSDRLDSYKEASGGLGFTPISLLNLRVGYQYIELNNKGDRKDNVLVDGPYVGASLRF
>NZ_CP045216.1|WP_127833570.1|3903694_3904297_-|hypothetical-protein
MRVSSLCLPFARVNNKEARMKNTTLALGLLLAATGTSAAEIGGQGGSHFWTARINSDRTAPGVQAALEYVHGHQQTHLLDASLGYGFSLGALQVAPRIGAFWADVKTTSTSSRGMNGGIRLMAPLPRAGATWLYLDYSLSPDFANHNLHALHQLEAGVYYQPAKWLSLSSGYRYLSVNGDYGHADQSLMDGLFIGAAVRF
>NZ_CP045216.1|WP_152391418.1|3904322_3905018_-|LrgB-family-protein
MTDFIISLLCLALTLLVYYLNKRLYRRRPTLLLMPLVLTPLVLVALLLLTHVSWQDYIAESHWLLWLLGPATLAFAVPVYENLHIIRRHWLSLSAGVITATLVAVCSSVWLARLLTLPDSIQRSLAVRSITTPFALAAAQPIGGQPDLVALFVVITGVFGMAVGDVLFLRIAIKQGVAKGAGFGAASHGAGTARAYQLGQQEGVVSSLVMMLSGVLTVLLAPLLGQLLWHA

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Crispr_ID: NZ_CP045216_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_9

3891249-3891428

Orphan

Consensus_repeat	Method
GATGTTGCCGCTGTTGCTGGCGGT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP045216_9

>merge|NZ_CP045216|9|3891249-3891428|CRISPRCasFinder
GATGTTGCCGCTGTTGCTGGCGGTGGTAGCGAAGGTGCTGCCCGCGCTGTTCACCGCGATACCGGTGCCGCCGTCGCTGATGCTGATGTTGCCGCTGTTGCTGCCGGTCGCCCCGCTCTCCACGCGCAGGCCGGTGGTATTGGCCCCGCTGAAGTTGATGTTGCCGCTGTTGCTGAGCTG

>NZ_CP045216|9|9|3891249-3891428|CRISPRCasFinder
GATGTTGCCGCTGTTGCTGGCGGT	GGTAGCGAAGGTGCTGCCCGCGCTGTTCACCGCGATACCGGTGCCGCCGTCGCTGATGCT
GATGTTGCCGCTGTTGCTGCCGGT	CGCCCCGCTCTCCACGCGCAGGCCGGTGGTATTGGCCCCGCTGAAGTT
GATGTTGCCGCTGTTGCTGAGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_021507820.1\|3896862_3898164_-\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
NZ_CP045216.1\|WP_058774916.1\|3874381_3875701_-\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NZ_CP045216.1\|WP_127833570.1\|3903694_3904297_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284781
NZ_CP045216.1\|WP_021507815.1\|3884706_3885663_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378976
NZ_CP045216.1\|WP_058757539.1\|3883416_3884604_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|182309
NZ_CP045216.1\|WP_152391416.1\|3895801_3896713_-\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP045216.1\|WP_152391411.1\|3879886_3881527_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274097
NZ_CP045216.1\|WP_021313201.1\|3900873_3901203_+\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_CP045216.1\|WP_152391418.1\|3904322_3905018_-\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|224265
NZ_CP045216.1\|WP_058774926.1\|3898744_3900700_+\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP045216.1\|WP_152391410.1\|3878531_3879767_+\|peptide-antibiotic-transporter-SbmA	unknown	unknown	gnl\|CDD\|182960
NZ_CP045216.1\|WP_152391414.1\|3885666_3887211_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP045216.1\|WP_136546466.1\|3894028_3894268_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_021507807.1\|3875712_3877497_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP045216.1\|WP_058780874.1\|3877499_3878237_-\|gluconate-2-dehydrogenase-subunit-3-family-protein	unknown	unknown	gnl\|CDD\|379295
NZ_CP045216.1\|WP_152391417.1\|3903009_3903555_-\|porin	unknown	unknown	gnl\|CDD\|284781
NZ_CP045216.1\|WP_058774923.1\|3894362_3895802_-\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|181971
NZ_CP045216.1\|WP_152391413.1\|3882915_3883125_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NZ_CP045216.1\|WP_152391412.1\|3881681_3882704_-\|YncE-family-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP045216.1\|WP_021507822.1\|3901199_3902852_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|236495

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_021507820.1\|3896862_3898164_-\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
NZ_CP045216.1\|WP_058774916.1\|3874381_3875701_-\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	8.94608e-11
NZ_CP045216.1\|WP_127833570.1\|3903694_3904297_-\|hypothetical-protein	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	7.75461e-09
NZ_CP045216.1\|WP_021507815.1\|3884706_3885663_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	6.20497e-30
NZ_CP045216.1\|WP_058757539.1\|3883416_3884604_-\|MFS-transporter	gnl\|CDD\|182309	PRK10213, nepI, purine ribonucleoside efflux pump NepI.	2.78599e-111
NZ_CP045216.1\|WP_152391416.1\|3895801_3896713_-\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	4.19825e-178
NZ_CP045216.1\|WP_152391411.1\|3879886_3881527_-\|DAK2-domain-containing-protein	gnl\|CDD\|274097	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent. This family consists of examples of the form of dihydroxyacetone kinase (also called glycerone kinase) that uses ATP (2.7.1.29) as the phosphate donor, rather than a phosphoprotein as in E. coli. This form is composed of a single chain with separable domains homologous to the K and L subunits of the E. coli enzyme, and is found in yeasts and other eukaryotes and in some bacteria, including Citrobacter freundii. The member from tomato has been shown to phosphorylate dihydroxyacetone, 3,4-dihydroxy-2-butanone, and some other aldoses and ketoses ().	0
NZ_CP045216.1\|WP_021313201.1\|3900873_3901203_+\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	8.2094e-43
NZ_CP045216.1\|WP_152391418.1\|3904322_3905018_-\|LrgB-family-protein	gnl\|CDD\|224265	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane].	1.62458e-86
NZ_CP045216.1\|WP_058774926.1\|3898744_3900700_+\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP045216.1\|WP_152391410.1\|3878531_3879767_+\|peptide-antibiotic-transporter-SbmA	gnl\|CDD\|182960	PRK11098, PRK11098, peptide antibiotic transporter SbmA.	0
NZ_CP045216.1\|WP_152391414.1\|3885666_3887211_-\|PAS-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	4.19827e-80
NZ_CP045216.1\|WP_021507807.1\|3875712_3877497_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.3881e-82
NZ_CP045216.1\|WP_058780874.1\|3877499_3878237_-\|gluconate-2-dehydrogenase-subunit-3-family-protein	gnl\|CDD\|379295	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3. This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.	2.00717e-43
NZ_CP045216.1\|WP_152391417.1\|3903009_3903555_-\|porin	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	2.12291e-42
NZ_CP045216.1\|WP_058774923.1\|3894362_3895802_-\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	gnl\|CDD\|181971	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed.	0
NZ_CP045216.1\|WP_152391413.1\|3882915_3883125_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	0.000139638
NZ_CP045216.1\|WP_152391412.1\|3881681_3882704_-\|YncE-family-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	5.96106e-27
NZ_CP045216.1\|WP_021507822.1\|3901199_3902852_+\|cation-acetate-symporter	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0

>NZ_CP045216.1|WP_152391414.1|3885666_3887211_-|PAS-domain-containing-protein
MRNNQPITQREFVFDDRATLMSTTDLNSHITYANDAFIEVSGFTPEEVNGQPHNMVRHPDMPPEAFADMWSTLKQGEPWTALVKNRRKNGDHYWVRANAIPVVREGKLQGYMSVRTKPSAEEVRQCETLYRDFREGRAKGRRFHKGLIVGSGWRRLTSVLKTLPLRWRIRSTLIALLPLSILGVWLLGMAPLAIGCFSGGMAGLLLLASLWLEQQISRPMERMCRQALSVATGASHKVEHIDRVDEIGMTQRAIGQLGLMFRWLVDDVSGQAINVLSASDAIARSNDELSRRTEQAAANVQQTAATMNEMTATVKSNTETASEVNTLSASTSAAAIKGGEVMQEMVGMMAEIADSSKRIANITSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSAKAASEIKNLVETSAGRVQSGRDHADAAGHTMQAIVDQVQNVTALIAQISAATAEQSIALSEVSSAVEDLDDITHQNAARVAEGAEASGRMAHQANRLVEAISVFR
>NZ_CP045216.1|WP_021507815.1|3884706_3885663_+|AraC-family-transcriptional-regulator
MSRYEDLTSELLMGMRLYGVKYQRIALHAPFGLQYDDAPGKAQLHFVGRGSLLIRSASGTVYPLQAGDALLIPHGKPHALISGEDAVCVPIATFNSKPICDSVCAINDAPDADACPDDSDVILFSACMAFELGGMQPLVHTMPDVMLVSTLLAQYPEIQPILDAMERETRQRKAGFAGILSRLADVVAAQIVRGWVENGCGQGSGLVQALRDPRLSLAMAAMHRAPGENWTVERLARESGSSRSVFAARFQNATGMTPLRYLTELRMRLAVERIVNDGEAVESVAFHLGYGSLAAFSRAFKRIVGTPPGALRAGREAS
>NZ_CP045216.1|WP_058757539.1|3883416_3884604_-|MFS-transporter
MSLDTEVVETSIAVEKPAWGAVFAMAFGVFGLITAEFLPVSLLTPIADSLRVSEGQAGQTVTVTALVALLTSLVIGNVTRRLDRRLVMLAFTLLLIASALLVAFAENLPMILLARVLLGMAIGGFWTLSTAITMRLVPADQVPRALSIVFSGISLATIIAAPLGSYLGGLIGWRNIFLLTGVLGVLALFWQFFTLPSMPPENKARSGGVLDLLRQSVMRWGMLAVIMMFTGHFAFFTYLRPFLETSAQLNVNQLSLVLLAFGVANFFGTSLAAWLVTRSVSLTLTGMALVMSVTAVLLVSFGHVSWLVASGVALWGLAFGSMPTGWSTWLSRAVPDDAESGGGLLVATIQLAITAGAAAGGWMFDLQGAGGVFLASGVLMLLAAITIFTRVRHHG
>NZ_CP045216.1|WP_152391413.1|3882915_3883125_-|DUF1471-domain-containing-protein
MKTIKTFAAVIALSVLSFASFAQSVTATASTLDGAEAQIAAKAQELGASYKVTEANFNNGVHMTAELTQ
>NZ_CP045216.1|WP_152391412.1|3881681_3882704_-|YncE-family-protein
MKANKTMQWALRPLLVATALLSCSALQAAETQPLNQPIAKGAYELAFSNSDNALFLATAQNAGNPQGGTVYRLDPQNLAVKQTISTELKTFGAAINQHTNVLYFGNTVNGALTAVDASSGKVINTLVLDGRKRGDTVRPLQPRELVADALTNRVYITGLGAQSVVWVVDGKTLQLISTIPNTGKMGTGLALDAAAQKLYVTNADGELVTINTRLNAIEKRQKIDGDKEHFFLNIALDSKGHRAFLSDAKQPQVLVLDTRTQQVIQRIEVPESLAVLFNADRDELYVTHRKAGEISIIDASSYKVKRTVKAPGLPNSLALSADGNTLFVSIKQPGSRKEPP
>NZ_CP045216.1|WP_152391411.1|3879886_3881527_-|DAK2-domain-containing-protein
MSQFFMHEKNDLVNEAIEGVLLSTPWHNLTRLDLGDEIRVVVRSDWDKSKVALISGGGSGHEPAHAGFVGKGMLTAAVCGDIFASPSVDAVLNAIVNVTGEAGCLLIVKNYTGDRLNFGLAAEKAKNLGYKVELVMVQDDIALPENPQPRGIAGTVLVHKIAGFAAEHGQSLEEVKALAQRTIDATSSIGLAFATCHIPGEKRDDRVAAGHSELGMGIHGEPGVITLDTQNSRKITSIMTDQLAQALPDGKQALLMINNLGGFSQLELALLTREVLQSPLAARITHLIGPATLVSALDMKGFSLTLLALEEAFFEALHAPVQVLGWTPMYDFAPISLQRAERIGSVLDFDPSDNAEVAQVVERVTQTLIDLESELNALDAKVGDGDTGSTFAAGAKKIQRGLREQQLPLDELPTLLALVGEQLATVMGGSSGVLMSILFTSAGQQLEEGSTLPQALMHGLERMKHYGGAQPGHRTLVDALQPALEALAAGESLADAAAAAQQGADATAQMQSAKAGRSAYLNQQSLDGVKDPGAYAIEKVFAVLAG
>NZ_CP045216.1|WP_152391410.1|3878531_3879767_+|peptide-antibiotic-transporter-SbmA
MFKSYFPRPALFFSSAAIWSLIAIFAWFGFFNDFPARFPALQAAMQQPLPTNASRFIHASQLWFYAYYWIMGGAFALVWRIIDNHPWQRWSVWGSLLIIFVTWFGVQVGVGVNAWYGPFYDMIQQALTKAGSVSINQFYVQVLAFLGIALIAVVIGVMNSFFVSHWVFRWRTAMNNYYMHNWQRLRLVEGAAQRVQEDTMRFASTLQDWGISFIQAIMTLVAFLPVLVTLSHHVKEVPILGNIPYALVIAALLWSLFGTALLALVGIKLPGLEFRNQRVEAAYRKELVYGEDDPQRAAPPTVQELFSRVRHNYFRLYFHYLYFNITRILYLQVDNVFGLFVLFPSIVAGTITLGLLNQITNVFDQVRSSFQYLITSWSTLITLMSIYKRLRSFEQILQDIPHEEMLREASE
>NZ_CP045216.1|WP_058780874.1|3877499_3878237_-|gluconate-2-dehydrogenase-subunit-3-family-protein
MSEEKKGHTRRDFLLRTITLAPAMAVGSTAMGALVAPMAAGAAASSAAAPQQAREYQPVWFTAEEFAFIKAAVARLIPNDERGPGALEAGVPEFIDRQMNTPYATGSNWYMQGPFNPDLPKELGYQLPLVPQQIYRLGLADADGWSKQQHGKVFAELTPTQQDALLSAFENGSAQFPQVPAKTFFAFLLQNTREGYFSDPIHGGNQGMVGWKLIGFPGARADFMDWVERGERYPFPSVDIRGERA
>NZ_CP045216.1|WP_021507807.1|3875712_3877497_-|GMC-family-oxidoreductase
MANALKKVDVAIVGFGWAGAIMAKELTEAGLHVVALERGPHRDTYPDGSYPQSIDELTYNIRKKLFQDLSKSTVTIRHDASQTAVPYRQLAAFLPGTGTGGAGLHWSGVHFRVDPVELNLRSHYEQRYGKNFIPEGMTIQDFGVSYDELEPFFDQAEKVFGTSGSAWSIKGKVVGKEKGGNPYAPDRSSDFPLPAQKRTWSAQLFAQAAESVGYHPYDMPSANTSGPYTNTYGAQMGPCNFCGYCSGYACYMYSKASPNVNILPALRQEPKFELRNNAYVLRVNLTDDKKRATGVTYLDGQGREVEQPADLVILSAFQFHNVHLMLLSGIGKPYNPISNEGVVGRNFAYQNISTLKALFDKNTTTNPFIGAGGAGVAVDDYNADNFDHGPYGFVGGSPFWVNQAGTKPISGLPTPTGTPNWGSQWKAAVADTYNHHVSMDAHGAHQSYRANYLDLDPNYKDAYGQPLLRMTFDWQDNDIKMAQFMIGKMRKITEAMNPKMIIGGAKGPGAHFDTTVYQTTHMSGGAIMGEDPKTSAVNRYLQSWDVPNVFVAGASAFPQGLGYNPTGMVAALSYWSAKAIREQYLKNPGPLVQA
>NZ_CP045216.1|WP_058774916.1|3874381_3875701_-|cytochrome-c
MIKSLTALLLGTLSFAALAEDTAADALVQRGEYLARAGDCVACHSTAGGKPFAGGLPMATPIGTIYSTNITPDKATGIGDYSYDDFQKAVRHGVAKNGDTLYPAMPYPSYAVVSDDDMKALYAYFMHGVAPVAQANKESDIPWPLSMRWPLAIWRGLFAPDVKAFQPAAQEDPALARGRYLVEGLGHCGACHTPRSFTMQEKALNNGQGNDYLAGSSAPIDGWTASNLRGDNRDGLGRWSEADLQQFLRYGRNDHTAAFGGMTEVVQHSLQYLSDADISAIARYLKSLGAKDPSQAVFREDDAVARALWKGDDSQPGAGVYVDSCAACHKTDGSGYQRFYPALRGNPVVMAEDPTSLIHIVLVGGTLPGVQGAPTAITMPAFGWRLNDSQVADVVNFIRSSWGNGVQTKVTAKQVAKLRQDDSVQPKQGSADIRVLEKQ
>NZ_CP045216.1|WP_136546466.1|3894028_3894268_+|hypothetical-protein
MRENQEKAVAYIDFMAAQIKSEPGDIYQDEIRISQEMKGYNPGLNKAYSDNALISRDLSSATPVKSGRVIILTLNNKQR
>NZ_CP045216.1|WP_058774923.1|3894362_3895802_-|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC
MAAITESLLRDILQAVGGAGNVVHCGNCMTRLRLTLADAARVDSARLKTLPGVLGVIDSDAQLQIVLGPGKAQTAAEKMQAMLNSATPEAPGDLHSIASAQKQQMKAKQTSALHRFLSCFATIFTPLIPGFIGAGLLLGFATLIEQVCHLNQPGEHARWLLDTVAYMKVFGKGLFTFLSILIGYNAQKAFGGTGVNGAIIASLFVLGYVPNATVGYYSGMQDFFGLTIDPRGNIIGVLLAAIFGAWLEKQLRKIIPDNLDMILTSLLTLLITGAVTFLVIMPIGGELFKGMSWLFIHLNNNPFGCAILAGLFLIAVMFGIHQGFIPVYFALMETQGFNSLFPILAMAGAGQVGASLALWCKADKHSLLRSQIKGAIVPGLLGVGEPLIYGVTLPRLKPFITACFGGALGGFFIGLVAWLGLPVGMNTVFGPSGLVTLPLMTSSQGIFAGMAVYLVGLIVAWIGGFVFTWWGGTKNVDLS
>NZ_CP045216.1|WP_152391416.1|3895801_3896713_-|N-acetylmuramic-acid-6-phosphate-etherase
MNIDLSQMITEGRNPASQNIDELNTEAMLRVINDEDKKVALAVEAIVPQIGEVVDAITAAFSQGGRLIYCGAGTSGRLGILDASECPPTFGTPRSQVVGLIAGGHTAILQAVENAEDNREQGAQDLKDIDFSARDVLVGIAASGRTPYVLGALAWAKQQGAFTAALTCNPNSAMSQAADVALTPVVGPEVVTGSSRMKAGTAQKLVLNMLTTGAMIRSGKVYGNLMVDVEATNQKLVQRQINIVKQATECDDARAQQALAACGGHCKTAIVMILADLNADEAQALLAQNHGFIRQALHHAGAQ
>NZ_CP045216.1|WP_021507820.1|3896862_3898164_-|glutamate/aspartate:proton-symporter-GltP
MKGFKLTLAWQILIALILGVIVGTVLHNQPDDREWLITNILTPAGDIFIHLIKMIVVPIVISSLIVGIAGVGDAKKLGRIGVKTIIYFEVITTIAIVVGITLANVFQPGSGIDMSTLATVDISKYEATTEAVQGAPHGLVTTILSLIPQNIFASLVKGDMLPIIFFSVLFGMGLSALPSEHRDPLVTVFRSISETMFKVTHMIMRYAPVGVFALIAVTIANFGFASLYPLAKLVLLVYVAILFFAFVVLGAVARFCKLRITTLMRILKDELILAYSTSSSETVLPRIMQKMEAYGAPKAITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSLTDEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRIMDMARTALNVIGNALAVLVIARWENQFDTKQAAAYELQLRTQNAS
>NZ_CP045216.1|WP_058774926.1|3898744_3900700_+|acetate--CoA-ligase
MSQIHKHPVPAAIAANALINADQYAALYQQSVDDPEAFWGEQGKILDWMTPYSKVKNTSFAPGNISIRWYEDGALNLAANCLDRHLATRGDHPAIIWEGDDASESKTLTFRELHADVCRFANVLTGLGVKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRVVDSSAKLVITADEGVRAGRSIPLKKNVDDALNNPNVTSVKNVVVFQRTGKETGWREGRDLWWHELMAKASDQHQPVAVEAEHPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHDDDVYWCTADVGWITGHSYLIYGPLACGATTLMFEGVPNWPQPSRMAEVVDKHKVTLLYTAPTAIRALMAEGDKAIAGTQRSSLRIMGSVGEPINPEAWEWYYKKIGDSRCPIVDTWWQTETGGFMITPLPGATELKAGSATKPFFGVQPALVDNEGNTLDGATEGNLVIVDSWPGQARTLFGDHDRFEQTYFSTFKNRYFSGDGARRDDDGYYWITGRVDDVLNVSGHRLGTAEIESALVSHPKIAEAAVVGIPHSIKGQAIYAYITLNHGEEPSPELYSEVRNWVRKEIGPIATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNFGDTSTLADPGVVEKLLEEKQSITMP
>NZ_CP045216.1|WP_021313201.1|3900873_3901203_+|DUF485-domain-containing-protein
MNEALNQQEAVWQQIESNPRFQELVHKRQSFALLLSLIMLVLYVGFILLIAFAPGWLGTPLHAGTNVTRGIPIGVGLIVVSFLLTGVYVWRANGEFDRLTKQIVSEVKS
>NZ_CP045216.1|WP_021507822.1|3901199_3902852_+|cation-acetate-symporter
MKRLLSASLAIVPASVFAADAITGAVQKQATNYEAIIMFVVFVAATLGITYWASKRTRSRSDYYTAGGNITGFQNGLAMAGDFMSAASFLGISALVYTSGYDGLIYSLGFLVGWPMILFLIAERLRNLGRYTFADVASYRLQQKPIRTLSACGSLVVVALYLIAQMVGAGKLIQLLFGLDYHIAVVLVGILMVLYVLFGGMLATTWVQIIKAVLLLFGASFMAIMVMKATGFSFNTLFTEAMAVHPKGSAIMQPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVADAREARKSVFWATGFMGYFYFLTFIIGFGAILLVGANPAFKDASGALIGGTNMAAVHLSNAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIRKGQATEREELRVSKITVLVLGVVAIALGILFEKQNIAFMVGLAFSIAASCNFPIILLSMYWSKLTTRGAMVGGWLGLLTAVVLMILGPTIWVQVLGHATPVYPYEYPALFSMLVAFVGTWLFSITDHSQQGALERAKFRGQFIRSQTGVGISQGKAH
>NZ_CP045216.1|WP_152391417.1|3903009_3903555_-|porin
MFKQLVTGSVLGLALLSGGAQAIEGSVDVGEHSTNLNLGLGTASPGLFLKGNWLRSDHDGSTYGLGMGYNLDVGDFRVAPTAKALFTHPEDGRDGFTVALGAGAQYNFNSMWGLYGEYYYAPEAFSDRLDSYKEASGGLGFTPISLLNLRVGYQYIELNNKGDRKDNVLVDGPYVGASLRF
>NZ_CP045216.1|WP_127833570.1|3903694_3904297_-|hypothetical-protein
MRVSSLCLPFARVNNKEARMKNTTLALGLLLAATGTSAAEIGGQGGSHFWTARINSDRTAPGVQAALEYVHGHQQTHLLDASLGYGFSLGALQVAPRIGAFWADVKTTSTSSRGMNGGIRLMAPLPRAGATWLYLDYSLSPDFANHNLHALHQLEAGVYYQPAKWLSLSSGYRYLSVNGDYGHADQSLMDGLFIGAAVRF
>NZ_CP045216.1|WP_152391418.1|3904322_3905018_-|LrgB-family-protein
MTDFIISLLCLALTLLVYYLNKRLYRRRPTLLLMPLVLTPLVLVALLLLTHVSWQDYIAESHWLLWLLGPATLAFAVPVYENLHIIRRHWLSLSAGVITATLVAVCSSVWLARLLTLPDSIQRSLAVRSITTPFALAAAQPIGGQPDLVALFVVITGVFGMAVGDVLFLRIAIKQGVAKGAGFGAASHGAGTARAYQLGQQEGVVSSLVMMLSGVLTVLLAPLLGQLLWHA

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Crispr_ID: NZ_CP045216_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045216_10

4301754-4301857

Orphan

Consensus_repeat	Method
AAAACCACACAATCACCCCGTAGGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045216_10

>merge|NZ_CP045216|10|4301754-4301857|CRISPRCasFinder
AAAACCACACAATCACCCCGTAGGGGCGGCATTCATGGCGACCAAATGTCGGTGCGCATAAATGCGCATGCTGTTCAAAACCGCACAATCACCCCGTAGGGGCG

>NZ_CP045216|10|10|4301754-4301857|CRISPRCasFinder
AAAACCACACAATCACCCCGTAGGGGCG	GCATTCATGGCGACCAAATGTCGGTGCGCATAAATGCGCATGCTGTTC
AAAACCGCACAATCACCCCGTAGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045216.1\|WP_021508189.1\|4298828_4299695_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NZ_CP045216.1\|WP_021506926.1\|4310763_4311651_+\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|183065
NZ_CP045216.1\|WP_021508191.1\|4301180_4301600_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|234796
NZ_CP045216.1\|WP_021508190.1\|4299758_4301156_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_CP045216.1\|WP_021506925.1\|4311695_4312469_+\|phosphate-ABC-transporter-ATP-binding-protein-PstB	unknown	unknown	gnl\|CDD\|182692
NZ_CP045216.1\|WP_003849523.1\|4295853_4296093_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|180739
NZ_CP045216.1\|WP_059010276.1\|4303581_4305411_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP045216.1\|WP_152391493.1\|4307792_4308530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045216.1\|WP_021313757.1\|4296201_4296672_+\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP045216.1\|WP_021506928.1\|4308674_4309718_+\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|182837
NZ_CP045216.1\|WP_021508185.1\|4294596_4294977_+\|F0F1-ATP-synthase-subunit-I	unknown	unknown	gnl\|CDD\|181208
NZ_CP045216.1\|WP_021508187.1\|4296686_4297220_+\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|235593
NZ_CP045216.1\|WP_152391492.1\|4306127_4306619_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185187
NZ_CP045216.1\|WP_152391490.1\|4297234_4298776_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP045216.1\|WP_152391491.1\|4302030_4303401_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|181867
NZ_CP045216.1\|WP_058758219.1\|4293265_4293883_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP045216.1\|WP_024143560.1\|4306804_4307728_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP045216.1\|WP_152391578.1\|4305680_4306127_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185186
NZ_CP045216.1\|WP_031279833.1\|4294985_4295804_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NZ_CP045216.1\|WP_031279603.1\|4309804_4310767_+\|phosphate-ABC-transporter-permease-PstC	unknown	unknown	gnl\|CDD\|183070

Protein	Function_ID	Function_description	E-value
NZ_CP045216.1\|WP_021508189.1\|4298828_4299695_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	3.02426e-173
NZ_CP045216.1\|WP_021506926.1\|4310763_4311651_+\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|183065	PRK11268, pstA, phosphate ABC transporter permease PstA.	0
NZ_CP045216.1\|WP_021508191.1\|4301180_4301600_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|234796	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated.	1.41883e-67
NZ_CP045216.1\|WP_021508190.1\|4299758_4301156_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP045216.1\|WP_003849523.1\|4295853_4296093_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|180739	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated.	1.44117e-23
NZ_CP045216.1\|WP_059010276.1\|4303581_4305411_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP045216.1\|WP_021506925.1\|4311695_4312469_+\|phosphate-ABC-transporter-ATP-binding-protein-PstB	gnl\|CDD\|182692	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB.	0
NZ_CP045216.1\|WP_021313757.1\|4296201_4296672_+\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	3.06842e-62
NZ_CP045216.1\|WP_021506928.1\|4308674_4309718_+\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|182837	PRK10918, PRK10918, phosphate ABC transporter substrate-binding protein PstS.	0
NZ_CP045216.1\|WP_021508185.1\|4294596_4294977_+\|F0F1-ATP-synthase-subunit-I	gnl\|CDD\|181208	PRK08049, PRK08049, F0F1 ATP synthase subunit I; Validated.	9.23731e-55
NZ_CP045216.1\|WP_021508187.1\|4296686_4297220_+\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|235593	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated.	3.09488e-79
NZ_CP045216.1\|WP_152391492.1\|4306127_4306619_+\|fimbrial-protein	gnl\|CDD\|185187	PRK15287, PRK15287, fimbrial minor subunit StfF.	2.53363e-24
NZ_CP045216.1\|WP_152391490.1\|4297234_4298776_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP045216.1\|WP_152391491.1\|4302030_4303401_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|181867	PRK09451, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP045216.1\|WP_058758219.1\|4293265_4293883_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	8.37964e-101
NZ_CP045216.1\|WP_024143560.1\|4306804_4307728_+\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.51138e-55
NZ_CP045216.1\|WP_152391578.1\|4305680_4306127_+\|fimbrial-protein	gnl\|CDD\|185186	PRK15286, PRK15286, putative minor fimbrial subunit StfE; Provisional.	1.09767e-23
NZ_CP045216.1\|WP_031279833.1\|4294985_4295804_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	1.47197e-79
NZ_CP045216.1\|WP_031279603.1\|4309804_4310767_+\|phosphate-ABC-transporter-permease-PstC	gnl\|CDD\|183070	PRK11275, pstC, phosphate ABC transporter permease PstC.	0

>NZ_CP045216.1|WP_021508191.1|4301180_4301600_+|F0F1-ATP-synthase-subunit-epsilon
MAMTYHLDVVSAEQQMFSGLVQRIQVSGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGEEEYIYLSGGVLEVQPGSTTVLADTAIRGEDLDEARALEAKRKAEEHMNSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
>NZ_CP045216.1|WP_021508190.1|4299758_4301156_+|F0F1-ATP-synthase-subunit-beta
MAAGKIVQIIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEEDKLLVARARKIQRFLSQPFFVAEVFTGSPGKYVTLKDTIRGFKGIMEGEFDHLPEQAFYMVGAIEEAVEKAKKL
>NZ_CP045216.1|WP_021508189.1|4298828_4299695_+|F0F1-ATP-synthase-subunit-gamma
MAGAKEIRTKIGSVKNTQKITKAMEMVAASKMRKTQERMAASRPYADTMRKVIGHLALGNLEYKHPYLDERDVKRVGYLVVSTDRGLCGGLNVNLFKKLLAEMKGWSDKGVQSDLAIIGSKGVSFFGSVGGNVVAQVTGMGDKPALSDLIGPVKVMLQAYDEGRIDKLYIVSNKFNNTMSQTPTITQLLPLPPAEGEEEMKAKTWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGNLIKELQLVYNKARQASITQELTEIVSGASAV
>NZ_CP045216.1|WP_152391490.1|4297234_4298776_+|F0F1-ATP-synthase-subunit-alpha
MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLADVMQGEMIALPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGAIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERASRVSADYVERFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLSHGQKVTELLKQKQYAPMSVAQQGLVLFTAERGFLNDVELAKIGSFEAALLAFADREHAELMAEINQAGNYNNEIEEKLKGLLETFKATQSW
>NZ_CP045216.1|WP_021508187.1|4296686_4297220_+|F0F1-ATP-synthase-subunit-delta
MSDLITVARPYAKAAFDFAVEHQSIDRWQTMLAFAAEVARNEQMAELLSGALAPEALSASFNAVCGDQLDEHAQNLIKVMAENGRLTALPAVLEQFIQLRDAYEATAEVDVISASALSDSQLSKISAAMEKRLSRKVKLNCKIDKSVMAGVVIRAGDLVIDGSVRGRLDRLADVLQS
>NZ_CP045216.1|WP_021313757.1|4296201_4296672_+|F0F1-ATP-synthase-subunit-B
MNINATILGQAIAFILFVAFCMKYVWPPIMAAIEKRQKEIAEGLASAERAKKDLDLAQANATDQLKKAKEEAQVIIEQANKRRAQILDEAKTEAETERNRIVSQAQAEIEAERSRAREELRKQVALLALAGAEKIIERSVDEAANSDIVDKLVAEL
>NZ_CP045216.1|WP_003849523.1|4295853_4296093_+|F0F1-ATP-synthase-subunit-C
MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFVVMGLVDAIPMIAVGLGLYVMFAVA
>NZ_CP045216.1|WP_031279833.1|4294985_4295804_+|F0F1-ATP-synthase-subunit-A
MAAGEISTPQEYIGHHLTHLQMDLRTFELVNAHDAPATFWTLNLDSMFFSVVLGLVFLVLFRKVAKSATSGVPGKMQAAIELVVGFVDSNVRDMYHGKSKVIAPLALTIFVWVFLMNFMDLLPIDLLPFIGEHYLGLPALRVVPSADVNITLSMALGVFILILFYSIKMKGVGGFAKELTLQPFNHPIFIPINLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWVLNVPWAIFHILIISLQAFIFMVLTIVYLSMASEEH
>NZ_CP045216.1|WP_021508185.1|4294596_4294977_+|F0F1-ATP-synthase-subunit-I
MSVSLYSVKLARTVLVIQLVTFVVIGALFALKDVTWGASAIAGGAAAWLPNVLFMFLAWRLQDQTPAKGRVAWSFAFGEVLKVFATVVFLVVALGGFGAVFWPLAITWLSVLVVQIVAPAVINNKG
>NZ_CP045216.1|WP_058758219.1|4293265_4293883_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MINKLSRLLQAANISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSIVVEPHLQGERFIDVGTGPGLPGIPLAIVRPQAHFTLLDSLGKRVRFLRQVQHELGLTNVTPVQSRVEEFPAEPPFDGVISRAFASLEDMLNWCHHLPGATGHFYALKGVRPDDEIAALPAGFAIEKIEPLRVPELEGERHLVVIRRQ
>NZ_CP045216.1|WP_152391491.1|4302030_4303401_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSTIAMSVVILAAGKGTRMYSDLPKVLHSLAGKPMVQHVIDAATGLGAQHVHLVYGHGGELLQEKLAHNPLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLIAQETLQRLRDAKPAGGIGLLTVVLDNPTGYGRIVRENGTITGIVEQKDASAEQLKIQEINTGILIANGADLKRWLAQLNNHNAQGEFYITDIIAMAHQEGRVINAVHPTRISETDGVNNRLQLSTLERTYQREQAEKLLLAGVMLRDPARFDLRGTLQHGRDVDIDTNVIIEGNVTLGHRVKIGAGCIIKNSVIADDCEISPYSVIEDATLAAACTVGPFARLRPGSELAEQAHVGNFVEMKKATLGKGSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDNVFVGSDTQLVAPVSVAAGATIAAGTTVMKDVTAADLVYNRKEQNQKSGWQRPVKKK
>NZ_CP045216.1|WP_059010276.1|4303581_4305411_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGAVAQRDIAEILLEGLRRLEYRGYDSAGLAVVDRQGHMTRLRRLGKVANLAEAAEQQPLIGGTGIAHTRWATHGEPSEANAHPHVSEHIIIVHNGIIENHEPLRELMIARGYRFASETDTEVVAHLVHWEQKQGGTLREVVLRVIPQLRGAYGMVIMDSRDPSVLVAARSGSPLVIGRGVGENFIASDQLALLPVTRRFIYLEEGDIAEITRREVTIIDRHGNQAQRAEIESNAQYDAGDKGVYRHYMQKEIYEQPNAIKNTLAGRFHDGIVDLSELGANAETLLSQVEHIQIIACGTSYNSGMVSRYWFESLANIPCDVEIASEFRYRKSAVRKNSLLITLSQSGETADTLAALRLSKELGYLGSLAICNVAGSSLVRESDLALMTKAGTEIGVASTKAFTTQLTVLLMLVAKLGRLHGMRAETEHEIVHALQALPSRIEQMLAQDKVIENLAEGFSDKHHALFLGRGDQYPIAMEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGLLYVFADQDAGFSDSEGMKIIPLPHVEEVIAPIFYTVPLQLLSYHVALIKGTDVDQPRNLAKSVTVE
>NZ_CP045216.1|WP_152391578.1|4305680_4306127_+|fimbrial-protein
MLLSDALASSFSVNISGNVMVPADCKINNGMPISVNFGDVRTDKIDGKAYQQPVSFTLSCTNLSSNALKLQLQGNAASFDSGALRASVSGLGIAFFKSNAERLNINTSWVNFTYPALPVITAVPVKDNSSSLTGGSFTSAATLVVELQ
>NZ_CP045216.1|WP_152391492.1|4306127_4306619_+|fimbrial-protein
MKRTWLMALLLLAMLKYSAVAAFSVQANFSGKLIEPPLCQINGEKPIIVEFGSVVISQINGDSYRKPVSWTLTCSNNPDKSMRVQISGTGSAFNSALLATSQRDLAIQILSGKNGENALALNNWLPFTFPALPVIQVVPVKKNAAVLTSGDFSAFAALVVEYQ
>NZ_CP045216.1|WP_024143560.1|4306804_4307728_+|IS5-family-transposase
MAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFTLMNVPLRCPDYTSVSKRAKSVNVSFKTFTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRAASADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIT
>NZ_CP045216.1|WP_152391493.1|4307792_4308530_+|hypothetical-protein
MEAPRVDGIRWVNASQVEITWSVVDVGMISGYARCNSSERTCAAGIGVSAWFIGHGTVFSAAGGPQIYVDQGESLASVAERFIRFNGRGGKFLRNSDTRYYSSYCGSFVTASATVTDYSGMVAPWAPCVNIPVVPVSCSVSGAALNINHGTLAPAAVNGAKASVNFSLFCNRDVNISFALAGGINILKLSNNISTLLSLADGSLNKPQLVRANVTTPFTLISTLSSTTPSPGNFTGSTVVFINYL
>NZ_CP045216.1|WP_021506928.1|4308674_4309718_+|phosphate-ABC-transporter-substrate-binding-protein-PstS
MTLMRSTVARILAATFAVSAVSAFAATDLTGAGGTFPAPVYAKWAAEYQQATGSKINYQGIGSSGGVKQIIAKTVDFGASDAPMKEEDLQKNGLFQFPTVIGGVVLAVNIPGVKSGELTLDGKTVGDIYLGTIKKWNDPAITKLNPGVKLPDTNINVVRRADGSGTSFVFTSYLSKVNETWNSKIGKGNTVNWPTGLGGKGNDGVAAFVQRLPGSIGYVEYAYAKQNNLTYTKLVDADGKPVAPSEASFANAAKGADWSKSFAQDLTFQKGNDAWPITSTTFILIYKEQANAEKGSEVLKFFDWAYKGGSKTATALDYAALPESVANQIRAAWKANIKDSSGKALYQ
>NZ_CP045216.1|WP_031279603.1|4309804_4310767_+|phosphate-ABC-transporter-permease-PstC
MAATKPTFKAPGKQGDMIFGALVKLSALIVLLLLGGIIVSLIFSSWPSIQKFGFSFLWTKTWDAPNEEFGALVPIYGTLVTSLIALIIAVPVSFGIALFLTELAPNWLRRPLGTAIELLAAIPSIVYGMWGLFIFAPLFAEYFQTPVGDVLANIPIVGALFSGPAFGIGILAAGVILAIMIIPYIASVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIGNTYQLDSASLFMPGNSITSALANEFAEAESGVHVAALMELGLILFVITFIVLAISKLMILRLAKSEGARS
>NZ_CP045216.1|WP_021506926.1|4310763_4311651_+|phosphate-ABC-transporter-permease-PstA
MTAIEMQARAELEASRRKMQAWRSTKNKIALTLSLLTMAFGLFWLIWILFTTVTKGIDGLSWTLFTESTPPPNTAGGGLANALAGSGLLIFWSTFFGTPLGILAGIYLAEYGRKHWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMQHFSGWAGVIALALLQVPIVIRTTENMLRLVPDSMREAAYALGTPKWKMISAITLKASVSGIITGVLLAIARIAGETAPLLFTALSNQFWSTDMMQPLANLPVTIFKFAMSPFAEWQSLAWAGVLIITLCVLLLNIVARVIFAKGKH
>NZ_CP045216.1|WP_021506925.1|4311695_4312469_+|phosphate-ABC-transporter-ATP-binding-protein-PstB
MSMATPSAGKIQVRNLNFHYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMYSLYPEQRAEGEILLDGDNILASHQDIALLRARVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALSKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSDTDTLFTKPAQKQTEDYITGRYG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

183162 : 257392

Hokovirus(16.67%)

transposase,integrase,protease

attL 177610:177636|attR 258199:258225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
177610:177636	attL	NA	NA	NA	NA
WP_064511431.1\|183162_184314_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_059012349.1\|184390_185308_-	bestrophin	NA	NA	NA	NA
WP_021508093.1\|185561_186203_+	hydrolase	NA	NA	NA	NA
WP_152390342.1\|186204_187107_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_152390343.1\|187202_188024_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_059012346.1\|188119_188923_-	hypothetical protein	NA	NA	NA	NA
WP_031279810.1\|188993_189926_-	nucleoside recognition family protein	NA	NA	NA	NA
WP_058780218.1\|190067_191420_-	glutathione-disulfide reductase	NA	NA	NA	NA
WP_059012345.1\|191550_192462_+	ribonuclease Z	NA	NA	NA	NA
WP_152390344.1\|192465_193308_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_049851967.1\|193884_194094_+	hypothetical protein	NA	NA	NA	NA
WP_152390345.1\|194226_195897_+	hypothetical protein	NA	NA	NA	NA
WP_058759342.1\|196113_198156_+	oligopeptidase A	NA	NA	NA	NA
WP_021508104.1\|198164_198914_+	16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ	NA	NA	NA	NA
WP_152390346.1\|199420_208672_+	hemagglutinin	NA	NA	NA	NA
WP_024143560.1\|208697_209621_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390347.1\|210693_211584_+	OmpA family protein	NA	NA	NA	NA
WP_021508107.1\|211668_212106_-	universal stress protein UspA	NA	NA	NA	NA
WP_010618665.1\|212528_212864_+	universal stress protein UspB	NA	NA	NA	NA
WP_021508108.1\|212942_214442_-	inorganic phosphate transporter PitA	NA	NA	NA	NA
WP_152390348.1\|214682_215867_+	aminoacetone oxidase family FAD-binding enzyme	NA	NA	NA	NA
WP_152390349.1\|216272_216548_+	hypothetical protein	NA	NA	NA	NA
WP_024143560.1\|216589_217513_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390350.1\|217673_220598_+	response regulator	A0A1V0SGX0	Hokovirus	2.6e-38	31.2
WP_152390351.1\|221087_222503_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_152390352.1\|222639_226311_-	autotransporter domain-containing protein	Q9LA58	Enterobacterial_phage	1.4e-86	36.7
WP_152390353.1\|226489_226837_+	hypothetical protein	NA	NA	NA	NA
WP_024143560.1\|226971_227895_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390354.1\|228317_228812_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152390355.1\|229131_230154_+	alpha/beta fold hydrolase	K0GAH4	Mycobacterium_virus	1.4e-07	28.6
WP_104094165.1\|230161_231136_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.7e-10	33.1
WP_031279816.1\|231251_232229_-	porphobilinogen synthase	NA	NA	NA	NA
WP_021508120.1\|232555_234061_-	glycine betaine/L-proline transporter ProP	Q6JIH2	Burkholderia_virus	2.8e-57	31.2
WP_021508121.1\|234419_235211_+	hypothetical protein	NA	NA	NA	NA
WP_021508122.1\|235203_235674_+	hypothetical protein	NA	NA	NA	NA
WP_152390356.1\|235701_236661_-	D-2-hydroxyacid dehydrogenase family protein	M1I636	Acanthocystis_turfacea_Chlorella_virus	1.7e-15	29.2
WP_152390357.1\|236635_238240_-	EAL domain-containing protein	NA	NA	NA	NA
WP_152390358.1\|238579_239656_-	AI-2E family transporter	NA	NA	NA	NA
WP_152390359.1\|239864_241088_+	MFS transporter	NA	NA	NA	NA
WP_152390360.1\|241656_243162_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_127834682.1\|243185_244001_+	5-deoxy-glucuronate isomerase	NA	NA	NA	NA
WP_031279682.1\|244185_245028_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_021507392.1\|245381_247295_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA
WP_104189576.1\|247840_249775_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA
WP_021507394.1\|249839_250853_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_104189577.1\|250922_251819_+	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_152390361.1\|251929_252076_-	DUF943 family protein	NA	NA	NA	NA
WP_152390362.1\|252036_252387_-	DUF943 family protein	NA	NA	NA	NA
WP_152390363.1\|252386_253070_-	DUF3289 family protein	NA	NA	NA	NA
WP_024143560.1\|253135_254059_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390364.1\|254121_254292_-	DUF3289 family protein	NA	NA	NA	NA
WP_058759321.1\|254472_255981_-	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_152390365.1\|256014_256278_+	hypothetical protein	NA	NA	NA	NA
WP_152390366.1\|256208_256535_+	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_058759383.1\|256567_257392_+\|protease	rhomboid family intramembrane serine protease GlpG	NA	NA	NA	NA
258199:258225	attR	NA	NA	NA	NA

DBSCAN-SWA_2

552893 : 605691

Bacillus_virus(28.57%)

tRNA,transposase,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024143560.1\|552893_553817_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390430.1\|553872_555423_-	hypothetical protein	NA	NA	NA	NA
WP_024143560.1\|555541_556465_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390431.1\|556510_556696_-	hypothetical protein	NA	NA	NA	NA
WP_059012473.1\|556888_558694_-	hypothetical protein	NA	NA	NA	NA
WP_127834598.1\|558706_561070_-	hypothetical protein	NA	NA	NA	NA
WP_082678702.1\|561263_563057_-	Biofilm associated protein A	NA	NA	NA	NA
WP_021509584.1\|563509_564832_+	MFS transporter	Q6JIH2	Burkholderia_virus	2.0e-59	34.5
WP_152390432.1\|566099_567062_-	fimbrial protein	NA	NA	NA	NA
WP_152390433.1\|567058_569491_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_059012069.1\|569490_570186_-	molecular chaperone	NA	NA	NA	NA
WP_059012052.1\|570212_570716_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_021509578.1\|570738_571308_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_152390434.1\|571855_573955_+	EAL domain-containing protein	G3MA91	Bacillus_virus	2.3e-20	35.0
WP_059012056.1\|574117_576208_+	EAL domain-containing protein	G3MA91	Bacillus_virus	6.4e-23	35.9
WP_152390435.1\|576497_577928_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_058757235.1\|577940_578444_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_127834593.1\|578510_581366_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.3e-143	37.1
WP_021506718.1\|581371_581830_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_021506719.1\|582141_583653_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	5.6e-45	37.0
WP_031279533.1\|583920_585021_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_021506721.1\|585020_586097_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_152390436.1\|586213_587491_-	DUF445 family protein	NA	NA	NA	NA
WP_152390437.1\|587514_589017_-	DUF853 family protein	A0A248XCZ8	Klebsiella_phage	2.7e-84	43.8
WP_152391503.1\|589187_590759_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_152390438.1\|591287_592019_+	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_021506726.1\|592051_593821_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_152390439.1\|593825_595076_+	c-type cytochrome	NA	NA	NA	NA
WP_021506728.1\|595188_595866_-	MarC family NAAT transporter	NA	NA	NA	NA
WP_021506729.1\|596554_597190_-	hypothetical protein	NA	NA	NA	NA
WP_152390440.1\|597285_597765_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_152390441.1\|597777_598383_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_152390442.1\|598394_598820_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_152390443.1\|598940_600320_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_021506733.1\|600429_600945_-	DUF2501 domain-containing protein	NA	NA	NA	NA
WP_024143560.1\|601912_602836_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390444.1\|604767_605691_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	3.2e-176	99.0

DBSCAN-SWA_3

956080 : 1005342

Planktothrix_phage(13.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024143560.1\|956080_957004_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390540.1\|957049_957670_-	FRG domain-containing protein	NA	NA	NA	NA
WP_152390541.1\|957653_958577_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152390542.1\|958603_959113_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_024143560.1\|959156_960080_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152390543.1\|960304_960970_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.0e-24	33.5
WP_088515750.1\|960962_961796_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-16	33.0
WP_031279350.1\|961785_962643_-	ABC transporter permease	NA	NA	NA	NA
WP_021506482.1\|962639_963692_-	ABC transporter permease	NA	NA	NA	NA
WP_058776471.1\|963691_965260_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_058770885.1\|966011_968735_+	magnesium-translocating P-type ATPase	M1HX51	Paramecium_bursaria_Chlorella_virus	2.0e-37	25.0
WP_058781696.1\|968894_969572_+	SDR family oxidoreductase	Q56AQ6	Bacillus_thuringiensis_phage	1.9e-13	33.7
WP_031279356.1\|969609_970266_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_152390544.1\|970499_970664_-	DUF1508 domain-containing protein	NA	NA	NA	NA
WP_024143560.1\|970707_971631_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152391508.1\|971942_972395_-	hypothetical protein	NA	NA	NA	NA
WP_021506488.1\|972566_972920_-	hypothetical protein	NA	NA	NA	NA
WP_152390545.1\|973367_973757_+	hypothetical protein	NA	NA	NA	NA
WP_152390546.1\|973753_974596_-	DUF4225 domain-containing protein	A0A140XBD0	Dickeya_phage	4.1e-29	50.4
WP_152391509.1\|974605_975067_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
WP_024143560.1\|975103_976027_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152391510.1\|976089_977010_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152390547.1\|977240_977996_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-12	28.8
WP_152390548.1\|978064_978493_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_024143560.1\|978789_979713_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_021506506.1\|980991_981474_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	9.8e-28	46.2
WP_021506507.1\|981633_982068_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_021506508.1\|982060_982351_+	RnfH family protein	NA	NA	NA	NA
WP_021506509.1\|982402_982750_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_152390549.1\|982934_984596_-	DNA repair protein RecN	NA	NA	NA	NA
WP_152390550.1\|984681_985560_-	NAD(+) kinase	NA	NA	NA	NA
WP_152390551.1\|985682_986261_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_058775636.1\|986306_986984_-	uracil-DNA glycosylase	A0A0A7D9F8	Equid_alphaherpesvirus	3.8e-54	48.4
WP_152390552.1\|987247_987631_+	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	6.8e-32	68.9
WP_021506515.1\|987818_989147_-	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.7e-43	28.8
WP_058770868.1\|989284_990034_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_152391511.1\|990030_991638_-	L-aspartate oxidase	NA	NA	NA	NA
WP_010617748.1\|992080_992659_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_152390553.1\|992686_993343_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_058781716.1\|993342_994299_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_152390554.1\|994295_994760_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_058758277.1\|994978_996778_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	4.1e-26	27.2
WP_152390555.1\|996787_997759_+	signal peptidase I	NA	NA	NA	NA
WP_021506523.1\|997877_998558_+	ribonuclease III	A0A2P0VNZ5	Tetraselmis_virus	1.1e-19	37.6
WP_058758278.1\|998606_999509_+	GTPase Era	NA	NA	NA	NA
WP_058775641.1\|999512_1000250_+	DNA repair protein RecO	NA	NA	NA	NA
WP_021506526.1\|1000310_1001042_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_010617758.1\|1001041_1001422_+	holo-ACP synthase	NA	NA	NA	NA
WP_010617759.1\|1001418_1001667_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	3.1e-17	51.2
WP_152391512.1\|1001963_1003349_-	hypothetical protein	E5AGC8	Erwinia_phage	4.9e-64	31.9
WP_152390556.1\|1003381_1004293_-	glycosyltransferase	S5FKN0	Shigella_phage	1.2e-138	80.1
WP_024143560.1\|1004418_1005342_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1196763 : 1207520

Salmonella_phage(28.57%)

integrase

attL 1203164:1203178|attR 1206573:1206587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152390604.1\|1196763_1200192_+	DUF1983 domain-containing protein	A0A291AWT4	Escherichia_phage	6.3e-312	51.0
WP_152390605.1\|1201164_1201587_-	hypothetical protein	NA	NA	NA	NA
WP_152390606.1\|1201602_1202094_-	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	3.0e-24	40.6
WP_058771615.1\|1202463_1202703_+	hypothetical protein	I6PD82	Cronobacter_phage	7.7e-18	49.4
WP_152390607.1\|1202702_1203968_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	6.3e-175	72.3
1203164:1203178	attL	NA	NA	NA	NA
WP_152391515.1\|1203925_1204231_+	hypothetical protein	NA	NA	NA	NA
WP_152390608.1\|1204234_1205404_-\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	4.3e-162	71.2
WP_152390609.1\|1205729_1206662_-	hypothetical protein	E7DYY8	Enterobacteria_phage	5.0e-113	76.5
1206573:1206587	attR	NA	NA	NA	NA
WP_152390610.1\|1206905_1207520_+	cytochrome c biogenesis heme-transporting ATPase CcmA	W5SAS9	Pithovirus	2.1e-11	27.6

DBSCAN-SWA_5

1695584 : 1763245

Escherichia_phage(36.36%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152390752.1\|1695584_1697366_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_059009760.1\|1697365_1697797_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_021509967.1\|1698037_1698781_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_021509968.1\|1698818_1699346_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	1.2e-10	35.1
WP_021509969.1\|1699500_1700115_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_021509970.1\|1700123_1701128_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	4.0e-07	23.6
WP_152390753.1\|1701134_1701920_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_058774752.1\|1701916_1702672_-	zinc ABC transporter ATP-binding protein ZnuC	R4TX06	Phaeocystis_globosa_virus	2.2e-13	33.5
WP_152390754.1\|1702749_1703721_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_031280193.1\|1703735_1705064_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	2.2e-16	43.5
WP_021509975.1\|1705191_1706166_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_152390755.1\|1706210_1707446_-	MdfA family multidrug efflux MFS transporter	NA	NA	NA	NA
WP_021509977.1\|1707538_1708981_-	pyruvate kinase	NA	NA	NA	NA
WP_152390756.1\|1709088_1709958_-	transcriptional regulator HexR	NA	NA	NA	NA
WP_021509979.1\|1710331_1711807_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	1.3e-78	36.4
WP_058780667.1\|1711967_1712414_+	hypothetical protein	NA	NA	NA	NA
WP_058757515.1\|1712592_1713240_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_152390757.1\|1713325_1714504_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_152390758.1\|1714665_1715307_+	DUF533 domain-containing protein	NA	NA	NA	NA
WP_152390759.1\|1715426_1717490_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_104093225.1\|1717483_1718152_-	exodeoxyribonuclease X	NA	NA	NA	NA
WP_010616356.1\|1718155_1718386_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.0e-15	61.8
WP_104093226.1\|1718539_1718917_+	copper homeostasis periplasmic binding protein CopC	NA	NA	NA	NA
WP_152390760.1\|1718916_1719798_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_031280196.1\|1719826_1720174_+	YebY family protein	NA	NA	NA	NA
WP_024143560.1\|1720874_1721798_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_023135683.1\|1722236_1723253_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
WP_058774585.1\|1723726_1724293_-	hypothetical protein	NA	NA	NA	NA
WP_058757753.1\|1724704_1725097_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_021510007.1\|1725172_1725403_-	hypothetical protein	NA	NA	NA	NA
WP_024143560.1\|1725546_1726470_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_058759072.1\|1726556_1727135_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_104187471.1\|1727552_1728620_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_024143560.1\|1729081_1730005_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_010618047.1\|1730435_1730996_+	hypothetical protein	NA	NA	NA	NA
WP_010618046.1\|1730992_1731787_+	hypothetical protein	NA	NA	NA	NA
WP_058775925.1\|1731863_1732193_+	DNA damage-inducible SOS regulon protein	NA	NA	NA	NA
WP_021509066.1\|1732656_1734597_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_031280003.1\|1734669_1735209_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	1.5e-21	45.8
WP_136547869.1\|1735296_1735785_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_152390761.1\|1735881_1737045_+	MFS transporter	NA	NA	NA	NA
WP_152390762.1\|1737122_1737554_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_058770225.1\|1737550_1738297_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_152390763.1\|1738396_1739341_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152390764.1\|1739608_1740073_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_152390765.1\|1740187_1740988_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_152390766.1\|1741558_1742686_+	acyltransferase family protein	NA	NA	NA	NA
WP_023135683.1\|1743160_1744177_-\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
WP_152390767.1\|1744236_1750164_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV38	Escherichia_phage	5.2e-38	23.4
WP_152390768.1\|1750191_1751259_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	9.1e-26	37.1
WP_021509079.1\|1751262_1752087_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_152390769.1\|1752096_1753017_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_104093323.1\|1753041_1754313_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_058781511.1\|1754334_1755501_-	hypothetical protein	NA	NA	NA	NA
WP_058770216.1\|1755487_1756198_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_152391527.1\|1756345_1757851_+	filamentous hemagglutinin	NA	NA	NA	NA
WP_021313390.1\|1757847_1758210_+	hypothetical protein	NA	NA	NA	NA
WP_152391528.1\|1758731_1760711_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_024143560.1\|1762321_1763245_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2616921 : 2630843

Tupanvirus(22.22%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058769694.1\|2616921_2617968_+	3-deoxy-7-phosphoheptulonate synthase	S4W5F1	Pandoravirus	1.0e-85	51.4
WP_152391074.1\|2617974_2619414_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.2e-57	39.8
WP_152391075.1\|2619511_2620255_-	EAL domain-containing protein	NA	NA	NA	NA
WP_152391076.1\|2620569_2621028_-	endopeptidase	A0A1V0DZX6	Clostridioides_phage	3.2e-12	34.4
WP_058780656.1\|2621092_2621839_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	8.7e-07	27.5
WP_058769691.1\|2621838_2622384_-	glutathione peroxidase	NA	NA	NA	NA
WP_021506244.1\|2622423_2623407_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_021506246.1\|2623540_2623843_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	5.6e-13	40.0
WP_021506247.1\|2623847_2626235_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.6e-09	29.9
WP_021506248.1\|2626249_2627233_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	3.8e-34	38.1
WP_121626058.1\|2627380_2627425_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_010616241.1\|2627545_2627902_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_006118955.1\|2628070_2628268_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_058757673.1\|2628367_2628910_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.3e-16	32.5
WP_152391077.1\|2628914_2630843_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.6e-127	37.3

DBSCAN-SWA_7

3221490 : 3266583

Escherichia_phage(20.0%)

tRNA,transposase,integrase,protease

attL 3218477:3218492|attR 3261357:3261372

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3218477:3218492	attL	NA	NA	NA	NA
WP_024143560.1\|3221490_3222414_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152391262.1\|3222480_3222726_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_127833791.1\|3222918_3224022_+	AI-2E family transporter	NA	NA	NA	NA
WP_059010513.1\|3224303_3225464_+	diguanylate phosphodiesterase	NA	NA	NA	NA
WP_021508608.1\|3225530_3225812_+	hypothetical protein	NA	NA	NA	NA
WP_021508609.1\|3225992_3226253_+	hypothetical protein	NA	NA	NA	NA
WP_021508610.1\|3226333_3226531_+	hypothetical protein	NA	NA	NA	NA
WP_136545627.1\|3226563_3226830_-	transcriptional regulator	NA	NA	NA	NA
WP_021508612.1\|3226964_3227234_-	hypothetical protein	NA	NA	NA	NA
WP_021508613.1\|3227333_3227576_-	hypothetical protein	NA	NA	NA	NA
WP_021508614.1\|3227888_3228128_+	hypothetical protein	NA	NA	NA	NA
WP_031279895.1\|3228349_3228610_-	hypothetical protein	NA	NA	NA	NA
WP_152391263.1\|3228808_3230248_-	sugar porter family MFS transporter	NA	NA	NA	NA
WP_150360907.1\|3230608_3231190_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_150360935.1\|3231213_3231825_-	hypothetical protein	NA	NA	NA	NA
WP_058769416.1\|3232193_3232649_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_152391264.1\|3232726_3233806_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_152391562.1\|3234882_3235062_-	hypothetical protein	NA	NA	NA	NA
WP_152391563.1\|3235903_3237439_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_021508621.1\|3237698_3237914_-	hypothetical protein	NA	NA	NA	NA
WP_152391564.1\|3238064_3238478_-	hypothetical protein	NA	NA	NA	NA
WP_152391265.1\|3238839_3240033_-	hypothetical protein	NA	NA	NA	NA
WP_152390444.1\|3240076_3241000_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	3.2e-176	99.0
WP_152391266.1\|3242628_3242847_+	hypothetical protein	NA	NA	NA	NA
WP_152391267.1\|3242903_3243587_-	VIT family protein	NA	NA	NA	NA
WP_152391268.1\|3243629_3244211_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA
WP_024143560.1\|3244837_3245761_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_141497181.1\|3246308_3246518_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_152391269.1\|3246729_3247482_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_152391270.1\|3247483_3248764_-	fimbrial protein	NA	NA	NA	NA
WP_152391271.1\|3248781_3251304_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_152391272.1\|3251306_3251897_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_024143560.1\|3251893_3252817_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152391273.1\|3253820_3254813_-	alkene reductase	NA	NA	NA	NA
WP_152391274.1\|3254803_3256030_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.3e-121	53.1
WP_152391275.1\|3256367_3256871_-	DUF1198 family protein	NA	NA	NA	NA
WP_058757932.1\|3257046_3257913_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.8e-33	37.2
WP_058781236.1\|3257912_3258125_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_152391276.1\|3258207_3259593_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	8.7e-45	35.0
WP_021508631.1\|3259811_3260306_+	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_058775254.1\|3260305_3261022_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_021508633.1\|3261155_3261665_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
3261357:3261372	attR	NA	NA	NA	NA
WP_152391277.1\|3261661_3262726_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_059012033.1\|3265302_3265989_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-30	34.7
WP_141097301.1\|3265959_3266583_+\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA

DBSCAN-SWA_8

3352155 : 3359872

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058769383.1\|3352155_3352626_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.0e-29	46.7
WP_058769382.1\|3352719_3353823_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	6.7e-48	34.3
WP_031279647.1\|3353826_3354276_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_058769381.1\|3354447_3354885_+	peptidoglycan-binding protein LysM	G3MBQ1	Bacillus_virus	2.1e-05	50.0
WP_152391299.1\|3354900_3355473_+	DUF3251 domain-containing protein	NA	NA	NA	NA
WP_058769379.1\|3355537_3356506_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.2e-47	42.2
WP_071813591.1\|3356516_3358364_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_021507155.1\|3358389_3358722_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.7e-10	33.0
WP_021507154.1\|3358747_3359872_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	9.4e-90	45.3

DBSCAN-SWA_9

3440945 : 3447411

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021507271.1\|3440945_3441296_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	1.4e-20	45.5
WP_021507272.1\|3441292_3441760_-	glycoside hydrolase family protein	A0A2I7S0L3	Vibrio_phage	3.6e-19	33.3
WP_021507273.1\|3441938_3442217_-	hypothetical protein	NA	NA	NA	NA
WP_031279669.1\|3442629_3443361_-	helix-turn-helix transcriptional regulator	A0A2I6PIE7	Escherichia_phage	1.8e-44	37.1
WP_152391568.1\|3443714_3444968_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.6e-92	44.7
WP_058758012.1\|3444978_3446082_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.9e-59	42.0
WP_021507277.1\|3446328_3447411_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.2e-113	57.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP045218

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

962 : 6723

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064645533.1\|962_1511_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.0e-49	56.1
WP_064645534.1\|1522_2413_-	dTDP-4-dehydrorhamnose reductase	K7QJU0	Escherichia_phage	2.2e-25	32.2
WP_064645535.1\|2434_3307_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.9e-107	66.0
WP_103755043.1\|3321_4410_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.7e-94	51.2
WP_000780222.1\|6131_6413_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_000493286.1\|6393_6723_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045217

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045216

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP045218

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection