CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	1 crisprs	DEDDh,csa3	0	4	0	0
NZ_CP045222	Achromobacter xylosoxidans strain DN002 chromosome, complete genome	3 crisprs	csa3,WYL,DEDDh,DinG,cas3	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045223_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045223_1

145608-145952

Orphan

Consensus_repeat	Method
ATCTTTCACCGGTGAAAG	PILER-CR

4 spacers

The CRISPR arrays of NZ_CP045223_1

>merge|NZ_CP045223|1|145608-145952|PILER-CR
ATCTTTCACCGGTGAAAGATGGCGAGACCTAACCTCGCGCCGGCCGATTCGAATTAGAAGCCTCCGCGAAAATCTTTCACCGGTGAAAACCGTACGCGTTTCGGACGTGTGGGCGACGTCTTATTGTTGTGCGGTTTGACCTGCATTGACCTCGATCTTTCACCGGTGAAAGACGCCTCCAACTCATGGGGAGCATTCCCGCTTGTACGCGGATTCAAATTGAGCCCATCTGCGACGCTTTGCCGCATCGAACTTTCACCGGTGAAAGTCCGCCGTTTAGCTTCCGCATCGAATTGGCGCCAGGAGCCGACGTGGGAATGCAGAGCGGTCTTTCACCGGTGAAAG

>NZ_CP045223|1|1|145608-145952|PILER-CR
ATCTTTCACCGGTGAAAG	ATGGCGAGACCTAACCTCGCGCCGGCCGATTCGAATTAGAAGCCTCCGCGAAA
ATCTTTCACCGGTGAAAA	CCGTACGCGTTTCGGACGTGTGGGCGACGTCTTATTGTTGTGCGGTTTGACCTGCATTGACCTCG
ATCTTTCACCGGTGAAAG	ACGCCTCCAACTCATGGGGAGCATTCCCGCTTGTACGCGGATTCAAATTGAGCCCATCTGCGACGCTTTGCCGCATCG
AACTTTCACCGGTGAAAG	TCCGCCGTTTAGCTTCCGCATCGAATTGGCGCCAGGAGCCGACGTGGGAATGCAGAGCG
GTCTTTCACCGGTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045223.1\|WP_152385688.1\|139835_140030_-\|DUF3606-domain-containing-protein	unknown	unknown	gnl\|CDD\|371985
NZ_CP045223.1\|WP_152385698.1\|156046_156622_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_054457997.1\|134453_134807_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385792.1\|136777_137119_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385689.1\|141100_142546_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP045223.1\|WP_152385686.1\|135292_136714_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385696.1\|153784_155557_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP045223.1\|WP_152385690.1\|143541_144663_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|272946
NZ_CP045223.1\|WP_152385699.1\|156618_157242_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381603
NZ_CP045223.1\|WP_152385691.1\|148180_148522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385684.1\|133647_134454_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP045223.1\|WP_152385793.1\|149580_150777_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385692.1\|148559_149240_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224808
NZ_CP045223.1\|WP_152385697.1\|155631_156060_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_054458006.1\|144663_145395_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP045223.1\|WP_152385693.1\|150779_151511_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385695.1\|153318_153753_-\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|128801
NZ_CP045223.1\|WP_152385687.1\|139539_139815_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379111
NZ_CP045223.1\|WP_152385694.1\|151542_153318_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045223.1\|WP_152385685.1\|134827_135241_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045223.1\|WP_152385690.1\|143541_144663_-\|hypothetical-protein	gnl\|CDD\|272946	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein. This model represents the most well-conserved core of a set of chromosomal and plasmid partition proteins related to ParB, including Spo0J, RepB, and SopB. Spo0J has been shown to bind a specific DNA sequence that, when introduced into a plasmid, can serve as partition site. Study of RepB, which has nicking-closing activity, suggests that it forms a transient protein-DNA covalent intermediate during the strand transfer reaction.	3.88704e-09
NZ_CP045223.1\|WP_152385688.1\|139835_140030_-\|DUF3606-domain-containing-protein	gnl\|CDD\|371985	pfam12244, DUF3606, Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.	2.34188e-20
NZ_CP045223.1\|WP_152385684.1\|133647_134454_-\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00643362
NZ_CP045223.1\|WP_152385692.1\|148559_149240_+\|hypothetical-protein	gnl\|CDD\|224808	COG1896, COG1896, Predicted hydrolases of HD superfamily [General function prediction only].	0.00779303
NZ_CP045223.1\|WP_152385689.1\|141100_142546_-\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.46814e-13
NZ_CP045223.1\|WP_152385699.1\|156618_157242_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381603	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	1.20847e-20
NZ_CP045223.1\|WP_054458006.1\|144663_145395_-\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.03203e-31
NZ_CP045223.1\|WP_152385695.1\|153318_153753_-\|H-NS-histone-family-protein	gnl\|CDD\|128801	smart00528, HNS, Domain in histone-like proteins of HNS family.	0.00112949
NZ_CP045223.1\|WP_152385687.1\|139539_139815_-\|hypothetical-protein	gnl\|CDD\|379111	pfam13298, LigD_N, DNA polymerase Ligase (LigD). This is the N terminal region of ATP dependant DNA ligase.	4.33086e-06
NZ_CP045223.1\|WP_152385696.1\|153784_155557_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	4.89793e-142

>NZ_CP045223.1|WP_054458006.1|144663_145395_-|ParA-family-protein
MATKQQAQPAPAQTRIAAFINQKGGCGKTTSTMQTGGAIALRGYKTLIVDLDPQQTATTWNGQAPEDRPFPARVTNLHAMGAKFTSEIQKNIGDFDVILLDCPPAIASPIPWAALQIADLCIIPIIPVLDNVWAAKEAKDIALRAQREYNEDLQIRYLPTLVSRGRLFDHCMRVIAEDEEIPAFDSVLSRRNAFPESQAYGATVHALASKSPAITEVENLTSQILDLLDLPHYVGQAATRRKK
>NZ_CP045223.1|WP_152385690.1|143541_144663_-|hypothetical-protein
MARRPDLGAAVKRAAEATTPTPVAPTAAPRVSVQDRFARAAKVLEAVPTGYHESADPSAQSPRPALSSESSSDEIALMLQNKYGTPRLANVPISELDSNPYGARKLYPPQIIEAMANWLREDGQLALLIGTERDGRFIVIDGETRKLGAPSAGLASLGMQVFENVSDEDLYLLSFKSNDRRNGQTALDNALAWRQLLDANVFPSEAALAARLSKTENGQVKGYTASQINKTLAILDLEEACLDVVRTNPAAFKISVLYELVQLQKVAPAKVVLEQVEKVLNDETSRQAIINLRERYTARGAAAKKPRHNSRQYQLEVGQGEQARSVGFIKEWDAGRVQMDITLPNKANAGKLVDELRKRLGELLQEAEQDGKS
>NZ_CP045223.1|WP_152385689.1|141100_142546_-|RepB-family-plasmid-replication-initiator-protein
MVSSNSRARRASKAPKAAEPTPAMQSQVVVFEGEDDDRTLKKSNDTIAVRIEKGGLSSLGRKVFNVLIYHAQQLGEPGTTGPTEVRNHAKYFWIPLRDVVADTRYNSNDTELLKQQIDQLQDVRVKIEGQKQYTSERLLSSATLYNPAGLNSRGGVVWLGYAFPPEISSEMLRPMQYTKLSLYYLTSLRTNGGMALYENCRRYLTNPSRVTNRQTVQWWYQVLTGNPSSAEVPEYKYFKRDTLLKAIREVNDVTDLVVELLEFKEGRRVVELQFKVSQKAQEPLQLPTPAVDSAAHLTRLMALGISQAEALEYIGTTDQGKLIATLEIVEKRLENKQLSPVGSPAGYFLRALRGSYATAQDIAKVTTRRTERPAAPKVQLEELTHRFLAARAEEAMGYVREIDEEQRNELLERFKESSSFRALHASAKRTLEPGREPSPMVKASFGMWVAQELWGQPTEQDLYGFGLKEIVGGNTLETQEA
>NZ_CP045223.1|WP_152385688.1|139835_140030_-|DUF3606-domain-containing-protein
MSDDLKNRGAQDRSRINVNEAHELRYWTKELNVSEDQLREAVQAVGVSAAAVRSHLAHQGGKRP
>NZ_CP045223.1|WP_152385687.1|139539_139815_-|hypothetical-protein
MDNGRRFIVYRSLIHQERFDLLLEVDDAMRWWTATHGIPIDPKARRIAIEQPAVHEVGRKSGGRPAALPRTGEPVSVWDAGEWCSAGDAWI
>NZ_CP045223.1|WP_152385792.1|136777_137119_-|hypothetical-protein
MGVTDDRDFCQCCGRQGLKRVVWIEDGESGAVRHFGTTCATAPANGFGVAPAVKAAIARFEVAQRLFWTRVNFEYRRRGGRHVPDPSRRGVFVAADPALKDVVLAELRQAAAG
>NZ_CP045223.1|WP_152385686.1|135292_136714_-|hypothetical-protein
MTDSPTPSDIEQLPQAWRNLWRAHTVLPDSVASDELTIFVRAGGRDAAHLAVKRALHAMFPAAYQDLDEAYENLSSAPELVREGVSERYVDRLFEVAWTGNKVDAWVSAPVFVVPEAAALYAAWITAQLDHASHYASRAFEPAPPIVADEATPTATQRNAMAVTKNDSAPLVPVIRHGNGFLIEGVRLVIRVLPSGGVDQICVGMSATAEAIGGDRDMNLGFAERFGFNADEIRIEGDVLTWAAQAPYIARYAPGVTDYREGFSVTLEPGQAGAVRQAVGLLRPVLAGYRAVLDHLRPWFDLLPEPWHVQGPVFHLVMARVLDGADQDAAMAAFDEAAENCLPGLGPAWKPRRFGRLSMMPSTVRAKRCDRECSMKDLTKNAAVLAVLQEAMAKLETIGLKCMALPNDLPGYGASVSLHAGEDDMEVTAAYVANQRGSEFAHLADEDARKGFAREVSELVVARRHFDDGSSTS
>NZ_CP045223.1|WP_152385685.1|134827_135241_-|hypothetical-protein
MKEQLWTVVRFPDGSWSYGGKPEDPAYARCEKWRLLAGDGKQAVKRAQGRRRRMLSARLQAIYQALCPDDVLHAEDPRRPAILEEMRLVAEAPTDREAAEVVAWWNSWPNPQHLSATEFVVEARQLFVRVNDGASPA
>NZ_CP045223.1|WP_054457997.1|134453_134807_-|hypothetical-protein
MSDVQTIILRDAVTTAINYLQRLPRVPTTAAVIRELEEALDRAGDEGTARLASGAVYTPVGELLLQALLRDQDLLLTTGVARGRADVLWQALAGDGLQLQLQSDDQPSSANVNFPGR
>NZ_CP045223.1|WP_152385684.1|133647_134454_-|hypothetical-protein
MARPRILPLPDEQARLIARGVQAIEAARPGSSNREFLREFVPLVVKVTGELFGAQTFQKLLRQMAPHRTPSSTTVQDAIHEYRSEVGADAQRGASHDSPPIADAPPPKRMRDVRNDKASGMQDEAALAAVELGKLHQLEVERLRARAEIMEARAAAADKARQDAVADAIAARAQTEGLQEAVANYQTLIKQLSETIQITQERAAADNRANLLRVDEVRRETREAEERLKAAQSTIALRDQALRNANALGDSLRQQLNELRRNLQVRDE
>NZ_CP045223.1|WP_152385691.1|148180_148522_+|hypothetical-protein
MRTGASPELFSREQAEKLHKLRERLELAPVTGRPFSTSRMFQDLAMSGALDRLPAPDACPPLANLIRAESPFMRGRQHILVAVRSAQAMHERLQNHEGATEASLPRLQERPRG
>NZ_CP045223.1|WP_152385692.1|148559_149240_+|hypothetical-protein
MAKAIARTSSRYPFDFANPDPRHVDIVDIALGLSKECSWNGQLPPDEFLSVAQHCVMASEMLPPDLQFEGLLHDGEEAYVRDLASPIKSLIPQYVSLAAGITRAIRIRFDLPLEHHSSEVKDVDRNLQRMEEGAIFGNEPKFELWSPRKAFERFIERFNELYPAHLERLREHGVRTYHDRLLAHPKAHADLVEGSTIEHLPRESFRGWRSPRNAHTELLRQIWTPP
>NZ_CP045223.1|WP_152385793.1|149580_150777_+|hypothetical-protein
MALNELFSGIGSRTAGFLQRAAERGIEVRVETKGAVVRDTHALGRRLIILGFAASIGAVGVNATGIADSALAPPKVRVNGDLVQPDPMLARLVHVGGSEREARIEVLQHRDLIQGLAHCSPGLEKIDPALLLTAYRYTAGWQDFSSPERAGDLFQLAQANEKLAGSLSEQGLQLKVRGDYSGWVSAVGSVARGVAEAAGSPQSQAVVRGAASVASSGAYAARGLGRIGDAQGAQRRIDLAGRSISDIARLAKSADRLLAGGPRANGSEKKDGPSARAPRPAERAAGGLSPDARAIGVLSDAAQRMGFHVSLSPLTGEPVPKDHATVIATHNSDFAAARQAAQRNLAEVATLHEYARASGIHLNFDLMYREYAQLADAAHERERQASRHTSTGDRPRGG
>NZ_CP045223.1|WP_152385693.1|150779_151511_+|hypothetical-protein
MHIPINSPFFTRLYLVQKGKGVFAPGGPLPSPMDLAIDCMMVAVSGSSVRQVRQLAAADELFDPARHAITEIQWVGDEAAMVERTVALCTMPSGDPAAPLVMYGPFRDGNHAERWLDAHFPTTAQLGHVLYPIPNAFSLALHTWNAEMQGVLSNRLAESPCRFGDPKQRLMPARREFAPAGHRRAEPAFEDMREFARPRARERLNARERDAQFDRLLSLTSPAHREEARRIILELHREIAQQA
>NZ_CP045223.1|WP_152385694.1|151542_153318_+|hypothetical-protein
MLLKPDHGNEAPDETDIVSDEDLAERAASRPDNARQGTPLEDASARQFQAKRVPAQPARPIAGNARQFAAGRLATDLDGDVARSVPPSANPHPGASSRPGAASAARLPPRADRIKRPVDAMDGRRLAEFWAAKQSEKVARKVESSIAATPQLGAVHPNVIMRLMQALMRILRLLFEKLGMHERPTKDGEKKDERGQEAKANVRFHDVEPAPPSSPEPVPAEMPGRAQPVPASQISPEHAQPAIHKHEGGVAADAETVDSTPELTPVTSAADLVTAAIVRLSIDPEVRRRMDEVGPNSSLQTAVYMAAVVNDLRDMARLVEDRLSAYGGAMNLRLASYQAHCQTYGGHTAATLLLQNGVIQPQDVSAAFAEDVKGITARYQPHLDELNLLRLAVTEAAREVYQCAADSPLQEDLLMEMDSSLTDLLGKDWRKSLALERLGAAPDEAEIAQLVQRMDDGPVVDGEHPASAEEYPAQDIAPSVSETPLQEERSPEPESDDPIDVSSPSPAADLTPQPSAEVDNASNVNVGSDTPALSDDGALSHQADLYESGPETMSRDEAMAQFALLETSSTVASSAERAPADEQEGYARERG
>NZ_CP045223.1|WP_152385695.1|153318_153753_-|H-NS-histone-family-protein
MATKTRPLVSLDKVDRELAQLNAQREKLIRTQQDAILHQLRIFAAKALDCGISSKVLADEIAVVARTQALQADGKPRRGRRPVGITKVMRQAFSKRPVAIKYASAEGQTWSGLGRAPAWIAGYTKEEREQFLVDKPPATPRSNS
>NZ_CP045223.1|WP_152385696.1|153784_155557_-|DNA-primase
MAIIRNEGVKRSSRIPDDVVEQVKQRADENLVEIVAAAVHLRKAGQSFVGLCPFHSESTPSFNVVPAKGFFFCHGCGEKGRAVDFQQKYFGMSFPDVIREFAGRFGVRLPGEIGALSAEPQTQPIARRQPTPADDLPPPVSFERRQELSAVLEEALAAYRSPALGNHPLTDALKEWVIGRRLTDESIDLFEIGISPQGWHGLRETFGNRYDDPLLLDADLVRETEDQKRRFDTFRDRIIFPVRDADGALVGFGGRRLQDNKKGEQTPKYLNTGTTDIFHKGHLLYGLHLAMQEIAARGYALVVEGYMDVVMLAQYGFRNTVAAMGTAFRGSHLNQLCRHTSEVVYLFDGDAAGERAMWRAVKESLPYADRVNFRFITLDGQDPDEWVRSVGSTAVQKAITHGESLASYFLRRVREMVVQDAADSAVQGDGRQRNGGQQHRAHELKGMLALIPERSSLRQYLEREVKRLLIPSETSSRERQTAHQLDGLPPVKRLAIAAMLQPDLAGRMRPALLALLPPEHPESSKVITLFDRGLQEGRSKNQPQRTQSDREWARVTLTHTPELLTELLAPTESPYQVDQTRPRDRSAPSQ
>NZ_CP045223.1|WP_152385697.1|155631_156060_+|hypothetical-protein
MKERVAPTQPNKAPHRGSGIFDSQLAKILFDTPPPLGRAGIEARAVEKFVSWFSSKDSMSDVRLAAYLKKVDSRLLPKLSGRAVLQILQTIERRRPRLLPAIALSGSWKQSLSQARVYSDLLKPSTLSRLATALERERYDDH
>NZ_CP045223.1|WP_152385698.1|156046_156622_+|hypothetical-protein
MTTTKQTEHGDDQIEQELPATEKRRRGLAVRTVVRTAKVVGRPYIELGKSVKRLRGTLRTLGQSLASPASGPDSNFVDAPNAADAFERLYEANGWTEPALMNQRKAVVRSKFASLVLAIVFLAVSVYGVLSLRYVAYFPIAMIFIGLAVTAMGLALFIQYAINQAQIDERRLYSAHEFFSHPNRWVFLFSS
>NZ_CP045223.1|WP_152385699.1|156618_157242_+|transglycosylase-SLT-domain-containing-protein
MSALEMFKKHTASALVALLLTISGLGAVASAAPDSAASPALDQSAKKAPTQIVLPARMPAGCLKEATERYQLRPDILLAIFKVESGGKAGVEGVNRNQTKDLGVGQLNTDSWAKYMVNKYGIPLDTLRNNMCQGIMSSAYALRSEMNRCIKGGFRGADAVWCSVAVYHHGGALPVPTANAKIREIQKVYVSKVWAAYQRIVAKGRFE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045223_1	1.1\|145626\|53\|NZ_CP045223\|PILER-CR	145626-145678	53	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	145626-145678	0	1.0
NZ_CP045223_1	1.4\|145876\|59\|NZ_CP045223\|PILER-CR	145876-145934	59	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	145876-145934	0	1.0
NZ_CP045223_1	1.2\|145697\|65\|NZ_CP045223\|PILER-CR	145697-145761	65	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	145697-145761	5	0.923
NZ_CP045223_1	1.3\|145780\|78\|NZ_CP045223\|PILER-CR	145780-145857	78	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	145780-145857	18	0.769

1. spacer 1.1|145626|53|NZ_CP045223|PILER-CR matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 0, identity: 1.0

atggcgagacctaacctcgcgccggccgattcgaattagaagcctccgcgaaa	CRISPR spacer
atggcgagacctaacctcgcgccggccgattcgaattagaagcctccgcgaaa	Protospacer
*****************************************************

2. spacer 1.4|145876|59|NZ_CP045223|PILER-CR matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tccgccgtttagcttccgcatcgaattggcgccaggagccgacgtgggaatgcagagcg	CRISPR spacer
tccgccgtttagcttccgcatcgaattggcgccaggagccgacgtgggaatgcagagcg	Protospacer
***********************************************************

3. spacer 1.2|145697|65|NZ_CP045223|PILER-CR matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 5, identity: 0.923

ccgtacgcgtttcggacgtgtgggcgacgtcttattgttgtgcggtttgacctgcattga	CRISPR spacer
ccgtacgcgtttcggacgtgtgggcgacgtcttattgttgtgcggtttgacctgcattga	Protospacer
************************************************************

4. spacer 1.3|145780|78|NZ_CP045223|PILER-CR matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 18, identity: 0.769

acgcctccaactcatggggagcattcccgcttgtacgcggattcaaattgagcccatctg	CRISPR spacer
acgcctccaactcatggggagcattcccgcttgtacgcggattcaaattgagcccatctg	Protospacer
************************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045222_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045222_1

2726899-2727019

Orphan

Consensus_repeat	Method
GGGGCAGCTAGCCCGCGTTAGCGGGCGCGGCGTGGGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045222_1

>merge|NZ_CP045222|1|2726899-2727019|CRISPRCasFinder
GGGGCAGCTAGCCCGCGTTAGCGGGCGCGGCGTGGGGGCCGCCCCGCCGCCGGGCCGCCCCAAGGCGGGGCAGCCCCCTTGGGGGGCAGCTAGCCCGCGTTAGCGGGCGCGGCGTGGGGGC

>NZ_CP045222|1|1|2726899-2727019|CRISPRCasFinder
GGGGCAGCTAGCCCGCGTTAGCGGGCGCGGCGTGGGGGC	CGCCCCGCCGCCGGGCCGCCCCAAGGCGGGGCAGCCCCCTTGG
GGGGCAGCTAGCCCGCGTTAGCGGGCGCGGCGTGGGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045222.1\|WP_056321352.1\|2721890_2722220_-\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP045222.1\|WP_152383590.1\|2727460_2728933_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238622
NZ_CP045222.1\|WP_056321339.1\|2718658_2718748_-\|K(+)-transporting-ATPase-subunit-F	unknown	unknown	gnl\|CDD\|378219
NZ_CP045222.1\|WP_152383587.1\|2719765_2721856_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|274698
NZ_CP045222.1\|WP_152383588.1\|2722216_2722894_-\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|225396
NZ_CP045222.1\|WP_128827581.1\|2723882_2726264_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP045222.1\|WP_152383594.1\|2735439_2736708_-\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
NZ_CP045222.1\|WP_056321381.1\|2731853_2732723_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP045222.1\|WP_056321384.1\|2732732_2733674_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP045222.1\|WP_152385428.1\|2714620_2716798_-\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP045222.1\|WP_152383595.1\|2736885_2737677_+\|deaminated-glutathione-amidase	unknown	unknown	gnl\|CDD\|143605
NZ_CP045222.1\|WP_056321357.1\|2722880_2723840_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP045222.1\|WP_152383593.1\|2733767_2735327_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173867
NZ_CP045222.1\|WP_152383591.1\|2729848_2730847_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226967
NZ_CP045222.1\|WP_056321370.1\|2728946_2729819_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP045222.1\|WP_152383584.1\|2713956_2714565_-\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|376890
NZ_CP045222.1\|WP_152383592.1\|2730843_2731851_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP045222.1\|WP_152383596.1\|2737780_2739121_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|237355
NZ_CP045222.1\|WP_152383586.1\|2719487_2719766_+\|DUF4212-domain-containing-protein	unknown	unknown	gnl\|CDD\|132686
NZ_CP045222.1\|WP_152383585.1\|2716880_2718659_-\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|235494

Protein	Function_ID	Function_description	E-value
NZ_CP045222.1\|WP_056321352.1\|2721890_2722220_-\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.9697e-32
NZ_CP045222.1\|WP_152383590.1\|2727460_2728933_-\|amidohydrolase-family-protein	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	3.18217e-152
NZ_CP045222.1\|WP_056321339.1\|2718658_2718748_-\|K(+)-transporting-ATPase-subunit-F	gnl\|CDD\|378219	pfam09604, Potass_KdpF, F subunit of K+-transporting ATPase (Potass_KdpF). This entry describes a very small integral membrane peptide KdpF, a subunit of the K(+)-translocating Kdp complex. It is found upstream of the KdpA subunit (IPR004623). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation.	0.00930197
NZ_CP045222.1\|WP_152383587.1\|2719765_2721856_+\|cation-acetate-symporter	gnl\|CDD\|274698	TIGR03648, Na_symport_lg, probable sodium:solute symporter, VC_2705 subfamily. This family belongs to a larger family of transporters of the sodium:solute symporter superfamily, TC 2.A.21. Members of this strictly bacterial protein subfamily are found almost invariably immediately downstream from a member of family TIGR03647. Occasionally, the two genes are fused.	3.40356e-140
NZ_CP045222.1\|WP_152383588.1\|2722216_2722894_-\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|225396	COG2840, COG2840, Uncharacterized protein conserved in bacteria [Function unknown].	4.54738e-39
NZ_CP045222.1\|WP_128827581.1\|2723882_2726264_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP045222.1\|WP_152383594.1\|2735439_2736708_-\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	0
NZ_CP045222.1\|WP_056321381.1\|2731853_2732723_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.5768e-100
NZ_CP045222.1\|WP_056321384.1\|2732732_2733674_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.20718e-128
NZ_CP045222.1\|WP_152385428.1\|2714620_2716798_-\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP045222.1\|WP_152383595.1\|2736885_2737677_+\|deaminated-glutathione-amidase	gnl\|CDD\|143605	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	1.236e-127
NZ_CP045222.1\|WP_056321357.1\|2722880_2723840_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	3.20766e-159
NZ_CP045222.1\|WP_152383593.1\|2733767_2735327_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173867	cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP045222.1\|WP_152383591.1\|2729848_2730847_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226967	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].	6.01884e-141
NZ_CP045222.1\|WP_056321370.1\|2728946_2729819_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.09621e-63
NZ_CP045222.1\|WP_152383584.1\|2713956_2714565_-\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	1.83586e-106
NZ_CP045222.1\|WP_152383592.1\|2730843_2731851_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	8.76323e-176
NZ_CP045222.1\|WP_152383596.1\|2737780_2739121_+\|AAA-family-ATPase	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP045222.1\|WP_152383586.1\|2719487_2719766_+\|DUF4212-domain-containing-protein	gnl\|CDD\|132686	TIGR03647, Na_symport_sm, putative solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments. [Transport and binding proteins, Unknown substrate].	3.19786e-26
NZ_CP045222.1\|WP_152383585.1\|2716880_2718659_-\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|235494	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional.	0

>NZ_CP045222.1|WP_128827581.1|2723882_2726264_+|DNA-translocase-FtsK
MPRISTASPRASRNTRNGPSPLQTRISALLREARWILFAALAAWLTLVLATWSASDPGWSHSVPGDVVRNQGGRLGAYLADILLYLFGFSAWWWVVLLLHRVRAGYRRLAAQLRVANSKQPEVLPRVHWEEGIGFFLLMMGSLGMEALRLASRGTHLPGASETASGAGGVIGQMLADLIGSSIGFTGATLAFLVMLAIGLSLFFSFSWLAVAERVGSWLEGLVRKMRNSYTARQDRKVGEVAKAVRTEQVVAKQEKLVHEQPVRIEPAITVVPKSERVEKEKQQSLFFPPTGGAEGDLPTLGLLDPPLNNQETVSAETIEFTSRLIEKKLADFGVSVTVVAAQAGPVITRYEIEPATGVKGSQIVNLAKDLARALSLVSIRVVETIPGKNLMGLELPNPRRQMVRLSEILGSQTYHASHSVVTMALGKDIAGNPVVADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKADASHTRLILIDPKMLEMSVYEGIPHLLAPVVTDMRQASNALNWCVGEMEKRYRLMSKMGVRNLAGYNTKIRDAIKREEPIPNPFSLTPDQPEPLSPLPTIVVVIDELADLMMVVGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQMGAETLLGQGDMLYMPPGTGLPVRVHGAFCSDDEVHRVVESLKSQGEPNYVEGLLEGGLDGDGAEGASSVTGIGGDAESDPMYDQACEVVLKHRRASISLVQRHLRIGYNRAARLLEQMEQSGMVSAMQSNGNREILVPAAAAREEA
>NZ_CP045222.1|WP_056321357.1|2722880_2723840_-|thioredoxin-disulfide-reductase
MSTPTHAKVLILGSGPAGYTAAVYAARANLNPVLVTGLAQGGQLMTTTDVDNWPADADGVQGPDLMQRFQKHAERFNTEMLFDHIAKVDLSKRPFTLTGDTGKVYTCDALIIATGASAKYLGLPSEQSFMGRGVSGCATCDGFFYRNQDVVVVGGGNTAVEEALYLSNICRKVTLIHRRDKFRAEPILVDKLMSKVENGNMELKLFHTLEEVLGDDSGVTGVRVRHVDTGATEDMAVTGAFIAIGHQPNTEIFQGQLEMKDGYIVTKSGLSGMATMTSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRWLENAGQ
>NZ_CP045222.1|WP_152383588.1|2722216_2722894_-|DNA-mismatch-repair-protein-MutS
MRGSKVGVADLKRLKKDLQEERERAALAPQRAAAAAAARPASPPEDDLAAFKRSMKSVTPIRHAPRVEHKPAPEPAPALRRANALGETPNRADAGVSDGGEITHLLSEGGTAFVRGDVAPDTARNLRRGQWRAGAELDLHGLRVEQARHALLSFLDECQEHGIRCVRIVHGKGYNSEGLEPVLKDKARTWLVQKADVMAFSEAPEREGGAGALLVLLRQSEGPRK
>NZ_CP045222.1|WP_056321352.1|2721890_2722220_-|multidrug-efflux-SMR-transporter
MKWLYLAVAIVAEIFATSALKGSEGFTRLVPSVITVFGYLISFYFLSLTLREIPVGIAYAIWSGVGIVLISIVGAVLFKQHLDTPALIGIGLIIAGVVVMNVFSKSVSH
>NZ_CP045222.1|WP_152383587.1|2719765_2721856_+|cation-acetate-symporter
MPFFTGDTPQEFRIRLRRIYVLYTAGFALMILLMALAEILGMPRNWIGYVFLLVTVSLYAGIGIVCRTSDQVEYYVAGRRVPAIYNGMATAADWMSVASFIGVAGTLYLTGYGGLAYIMGWTGGYVLVAMLLAPYLRRFGQYTIPDFMGARYGGNLPRLAGVFCAVLCSFTYLVAQIYGVGIITTRMTGISFELGIFVALGGMLVCSFLGGMRAVTWTQVGQYIILVIAYLVPVIWLSVKHTNMPLPQLSGGAVLQQVTEKEVYLQNDPSEIEVRTIWQQRADEMARRLQTLPESWTLEKDKLRSRLAQLNAGDAPMVEIRSAERELAAYPPTVDDARTTWSQAKATFEARAARPTPHAEPFPAKDPEERSNMRINFLAMVLCLMLGTAGMPHILMRSYTTPSVIEARKSVCWSLLFILLLYFMAPALALLVKFEIYTQVVGSNFLSLPNWVHAWSAVDTNLLDVTDINRDGVVQLSEISMGADVVVLAMPEIGGLPYVISGLVAAGGLAAALSTADGLLLTLSNSLSHDMWYRVVSPRMSAARRVMVSKILLLVVAFGAAWVAARKPADILFMVSAAFSFAASSFFPALVMGVFWRRANKWGATLGMAAGLAVTFAYMTHTHPWLRESVLGIARTQPVDLWWGIQPIAAGVFGAPVAFLTIFVVSLLTPPPDRATLALVDYLRNPDARHPQPDNS
>NZ_CP045222.1|WP_152383586.1|2719487_2719766_+|DUF4212-domain-containing-protein
MPQTRLTPSRTSVTPYWRRNLRLILLLLAIWAALTFIPSFFASRLSFDFIGWPFAFWMAAYGAPLAYLIIIAVYARVMNRADERADETGEPR
>NZ_CP045222.1|WP_056321339.1|2718658_2718748_-|K(+)-transporting-ATPase-subunit-F
MSWLYWLSGLTAAFLFVYLLVALFKPEKF
>NZ_CP045222.1|WP_152383585.1|2716880_2718659_-|potassium-transporting-ATPase-subunit-KdpA
MTPEFVGLLVVYLAVLFAIAPVLGRYIRVAMEDGRSRLTAWGRPLERGIYRLAGIDPSAEMGWKRYAAAVLVFNLVGIAAVYALQRVQGLLPLNPAGLGAVSPDSALNTAISFVSNTNWQGYAGESTMSYLTQMLALTVQNFVSAATGIAVVFALIRGLARHCSATVGNFWADMVRCTLYVLLPLSLVLAMALVSQGVIQNFNPYQAVQTVETVHYDQPRVDAQGQPVLDAAGAPVTDPATTRTQTLAMGPVASQEAIKLLGTNGGGFFNANSAHPFENATPLSNFLQMLAILAIPAALCFTFGEMVGSRRQGIAILAAMTALFAVFALSTAYFEQQPNPMAEQAGAATFGGNMEGKETRFGIAATSLFATVTTAASCGAVNGMHDSFSAMGGLSPMLLMQLGEVVFGGVGSGLYGMLAFAILGVFIAGLMIGRTPEYLGKKIEAFDMKMVSIVILATPLLVLGGTALAVSVAAGQAGVHNPGIHGFSEILYALSSAGNNNGSAFAGLSANTPFYNVLLGIAMWFGRFAVIVAVLAMAGSLAAKRRLPAGPGSMPTTGPLFVTLLIGAVLLVGALTYVPALALGPVAEHLQP
>NZ_CP045222.1|WP_152385428.1|2714620_2716798_-|potassium-transporting-ATPase-subunit-KdpB
MPGEPGQPNAGKQSAARTDAARPSAARPDAARPFGLWSRALVGPALVDSLRKLSPAAQVKNPVMFVVYVCSLLTTVLWIMALGGQAEAPAGFILGIAVWLWFTVLFANFAEALAEGRGKQQAATLRGLRTTIDAHLLKGFRDDDALDADPAHWRAQAVNQPSGLLRRGDVVLVEAGDTVPGDGQVIAGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIFVRIAADPGESFLDRMISMVEGARRQKTPNELALTILLVGLTVVFLLVVVTLMPFSLYAVAAAGGGAAVTVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMMSANVIATSGRAVEAAGDVDVLLLDKTGTITFGNRQASTFLPAPGVSARELADAARLASLADETPEGRSIVALADKAIHAPAPRIAGIEFVPFTAQSRMSGADLGERRIRKGAVDAIQAWLAAQDATVPAEALRLAEDVARRGSTPLMVSDGNRALGVVELKDIVKPGIQSRFAELRRMGIKTVMITGDNKLTAASIAAEAGVDDFLAEATPEAKLKLIRDYQSQGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGALTTFSVANDVAKYFAIIPAAFATVYPQLGVLNIMGLATPSSAILSAVIFNALIIVVLIPLALKGVRYRPLGASVLLRRNLLIYGLGGLIVPFAGIKLIDMVLAALGWA
>NZ_CP045222.1|WP_152383584.1|2713956_2714565_-|potassium-transporting-ATPase-subunit-KdpC
MTTATSAPRQGGILRPALTVFAALSLITGLAYPFLTTGIASAVFPHQAAGSLIEQDGKVVGSALIGQSFTSPQYFWGRPSATAPMPYNAAASGGSNLGPRNPALAEAIQARIAALKAADPDNAAPVPADLVTASGSGLDPHISPAAAAYQADRVARARNLPRSEVDALIQAHTATPWLGVLGSPAVNVLTLNLALDKLRGPR
>NZ_CP045222.1|WP_152383590.1|2727460_2728933_-|amidohydrolase-family-protein
MYDTLIGNVRILDGSGGPEYRASVALDGGRIAAIGELPGAPARQLIDGTDLALAPGFIDVHTHDDTNVIRTPDMLPKLSQGVTTVVVGNCGISASPVTLRGEPPDPMNLLGKREDFRYATFADYTRAIEAARPAVNVAALVGHTALRSNHMDRLDRAATRDEVLAMRAQLRDALAHGAIGLSTGLAYASAFDADTAEVKLLVEALDEFGALYTTHLRSEFAAILEAMQEAFDIGLHARVPVVVSHLKCAGAGNWGRTKEVLFALENAGRMQHVGCDCYPYSASSSTLDLKQVTDEFDIDITWSEPHPEQARRKLAAIAADWGVTLLEAAKRLQPAGAVYHNMHEDDVRRVLSHRLTMVGSDGLPNDPMPHPRLWGAFPRVLGHYSRDVGLFPLAQAVHKMTGLSAARFGLAERGFVREGHHADLVLFNPDTVIDRATFAAPVQTAAGIEAVWVNGVLSYRKGQATGERAGRWLPRSGDLRASYPALPAAS
>NZ_CP045222.1|WP_056321370.1|2728946_2729819_-|MurR/RpiR-family-transcriptional-regulator
MNIIRDIVFQIRSRRDALSVTERKVADAILDDIIWSASATVDQLAAKAGVSIATISRFARTVGCDDTRDLKMKLAQASTVGSRFLDPSAPAEESTFYARIYADIESTLRAHLPTFTEPLFEAAASIVDGARMIYVFGMGGASAVLAQEVQSRLVRLGYPIAVYSDAVLLRMVAATLDERDAVLVLSASGLTPEIVGAARIVKQYRARIVAITDASSELAKLADVVLPIRTDETDFIYKPSASRYAMMLAIDLLSTELAMLNQEENRERLRRIKLALDEHRGGPNRLPLGD
>NZ_CP045222.1|WP_152383591.1|2729848_2730847_-|ATP-binding-cassette-domain-containing-protein
MTSPSTPRAAAPLVRIDDLKVHFPTSQARNAPVVRAVDGVSFDVPRNTIVGLVGESGSGKTTTGRALLRLFAPTAGRIVFDGQDITTLNEKQMLPWRRRMQIVFQDPYASLNPRMTVAEILGEALDTHKLAQHRRAERIGELLERVGLNADHSRRYPHEFSGGQRQRIGIARALAVEPDFIVADEPVSALDVSVQAQVLNLLQDLQRDLGLTMLFVAHDLAVVDYLCDDVVVMYLGRVMERGPTSEVYARPRHPYTRALLSAAPVPDPRAPRSRILLKGDIPSPVNPPSGCVFRTRCPHAIDACAAAVPPAVGVSADHHVSCIRLDDPALAA
>NZ_CP045222.1|WP_152383592.1|2730843_2731851_-|ATP-binding-cassette-domain-containing-protein
MTASTRDIVLSVQGLKTWFHSRDGIAKSVDGVTFDLARGETLAIVGESGSGKSVTSLSIMGLLPKPAGRIEAGKILFRDRQGVQHDLAHATPATLQRIRGAEIAMIFQEPMTSLNPLYTVGDQIAEAVLQHEGGSRAAALKRAREMLERVEIPAADRRVNEYPHQMSGGMRQRVMIALALACNPAVLIADEPTTALDVTVQAQILDLLRRLQAEMNMSILFITHNLGVVAEIAHRVAVMYAGRVVEDAGVYDLFEKPTHPYTRGLLSCLPTAALLASGERLRAIPGNVPSVLALPPGCTFAPRCPLAADDCRAGAPDLVTVQAEHRARCIKVNPL
>NZ_CP045222.1|WP_056321381.1|2731853_2732723_-|ABC-transporter-permease
MTTATSMNPGADRWQVLRLLVARKTVLISLIVIVVLAAAALLAPWISPYDPFKLSIMNRLKAPGAAHWFGTDDFGRDVFSRVIHGGRLSLMVGFSVVILSSVLGIALGLIAGFFRTADKFVSRLIDAMMAFPDILLAISLVAALGPSLVNVVIALGIVYTPRLARIVRASTLVIRELPFVEAARALGVPTWRIVTVHVLRNLVSPILVQGTFIFAYAILAEAGLSFLGVGVSPDIPTWGTMINAGQQYMGSADWIMIFPGIAIVLSVLSLQLVGDGLRDVLDPRLRKEL
>NZ_CP045222.1|WP_056321384.1|2732732_2733674_-|ABC-transporter-permease
MLRYLLNRLVGLVAVMFIVATIVFVIIRLTPGDPAAVMLGPQASQQDIAALRAQLGLDQPVAVQYVSWLGKLLQGDLGQSIFMNKPVLAALADRAEPTILLTLMSLLIASAIALPVGILSAVKRGTTLDQSVLSFSMFTSSVPSFWLGLLLMQVFSVKLGWLPVAGYGGPDASLATRLSHLILPAVVLGLVNSALITRFIRASMLDVLRDDYVRTARAKGLPERKVILKHAVRNALIPILTVLGLTTALLISGAVVTETVFGLPGVGSLVVSAVLRRDYPVIQGALLIIAAIYVLINLLIDLLYLVVDPRVRY
>NZ_CP045222.1|WP_152383593.1|2733767_2735327_-|ABC-transporter-substrate-binding-protein
MNFRTSRRGGGLKSLLAAGAIGLTALSTPALCATPVKGGTISVATIGEPPTLDPMTSTADLVGILTQHFFETLYTFDAKWNLTPLLADKMPEVSADGLVYTIALRQGITFHDGSKMDSSDVLASLKRWTETATRGKMAAKIISGIEAPDANTIRITLKQPYAPLTALLAMNNSAAVIMPKGKIAPSLTEFVGTGPYQLKARVPDQYVQLVRFEGYKQREGEPNGYGGARKQYLDEIRFVPVSNANTRVESAVAGQFDYVDSLPVESLSKLKNGRSDPVMLKPFGWPRLVLNTKQGIMSNQAVRQAVQLALNEEDMLFAAFGDKNFYKLNGDLYPEGYPWATALGGKVYNKGDAAAAKKLVDGANVQDRKIRILTSQQYEFHYKMALVAAEYLKAAGFTVDMQVVDWATLTQRRQDPAVWDIFITHSPFLPEPALIDFPSKDAPGWWDTPRRNQVLDAFNQAGSQEERVKRWADVQQAVYDEVPFIKVGDFNAQAARSPALQGTQAVPWPYFWNAWKASK
>NZ_CP045222.1|WP_152383594.1|2735439_2736708_-|amino-acid-deaminase
MTNSSSPAAPLDVNGKGLGAFPESCTTADVAALNWNLLNEDVSLPVAVLYEARMRHNLQWMQQFMEAYHVKLAPHGKTTMSPALFKRQIDNGAWGITLATAPQVLASYQHGVRRVLMANQLVGRANMAIIARLLEDPAFTFFCIVDSAANAAQLGKFFGDEGKVLPVLIELGPAGGRTGVRDDAQLQAVADEIARWPGLALAGIEVYEGVLQEEGAIRAFLRRATDALRGLAAAGRLRKSGPALISGAGSAWFDVVAEEFSQLDIGSPLEVVLRPGCYLSHDVGIYRSAAERINAQNPVARQMEPGLQPALQVWAYVQSLPEPGRAIIAMGKRDAAFDAGLPTPARLYRPGSVQPGAAPAHWKLSAMMDQHAFMQVGDGDDIQVGDMIAFDISHPCLTFDKWRQVLLVNEHYGVTGVAETFF
>NZ_CP045222.1|WP_152383595.1|2736885_2737677_+|deaminated-glutathione-amidase
MLKVALGQFAVSRVWEENAQVCIDLMERARAGGAGLLVLPEGILARDITDPQIVLKAAQPLDGPFITRLLDASRGSDLATMMCVHVPTGEGRVWNTLVTIRDGKILSQYRKLHLYDAFTMKESTNVTPGTDIPPLLDIAGLRVGLMTCYDVRFPELARRLALDGADLLVLPAAWVRGPLKEMHWEVLVTARALENTCYVAATGECGERNIGCSMVVDPLGVVTARAGEAPALVFADIDPERLAHARKVLPLLANRRFAPPELA
>NZ_CP045222.1|WP_152383596.1|2737780_2739121_+|AAA-family-ATPase
MSNDLFAADPAHRPYVPLAERLRPRTLSDVVGQSHLLGPDKPLRVAFDSGRPHSMIFWGPPGVGKTTLARLMADGFDAQFIAISAVLGGVKDIRDAVTVAQVAQGQGRRTILFVDEVHRFNKAQQDAFLPYVESGLFTFIGATTENPSFEVNSALLSRARVYVLQSLTAEELQQLVDRAVAALNEGQEPGDTIRIEPDAREQLAAWADGDARRLISAVEVVAESAQSAGRDTVDAAWLEISLSQNLRRFDKGGDAFYDQISALHKSVRGSNPDAALYWFCRMIDGGADPKYLSRRLVRMAVEDIGLADPRATDLAVNGADIYERLGSPEGELALAQAVVYMACAAKSNAVYNAYNQARKFAAEHGSAPVPIHLRNAPTKLMKQLGHGKAYRYAHDEPHGYAAGEQYFPDGLKPSFYRPTDRGLEAKIQQKLAFLRELDAQERAKNR

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Crispr_ID: NZ_CP045222_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045222_2

3817953-3818078

Orphan

Consensus_repeat	Method
CAACGGGTGTCAGACACCGGCCAGCGAAGCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045222_2

>merge|NZ_CP045222|2|3817953-3818078|CRISPRCasFinder
CAACGGGTGTCAGACACCGGCCAGCGAAGCTCCGCCATTGCCGCAAGGTGTCTGACACCCTGGGGAGACGATCCTCAGTTCGTGGCGGCGTCTCAACGGGTGTCAGACACCGGCCAGCGAAGCTCC

>NZ_CP045222|2|2|3817953-3818078|CRISPRCasFinder
CAACGGGTGTCAGACACCGGCCAGCGAAGCTCC	GCCATTGCCGCAAGGTGTCTGACACCCTGGGGAGACGATCCTCAGTTCGTGGCGGCGTCT
CAACGGGTGTCAGACACCGGCCAGCGAAGCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045222.1\|WP_152384117.1\|3814696_3815038_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_152384115.1\|3812048_3813899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378931
NZ_CP045222.1\|WP_152384123.1\|3822671_3824168_-\|microcystin-degradation-protein-MlrC	unknown	unknown	gnl\|CDD\|227763
NZ_CP045222.1\|WP_152384122.1\|3819258_3820062_-\|FCD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225097
NZ_CP045222.1\|WP_152384119.1\|3816049_3816268_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_152384118.1\|3815034_3815529_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226439
NZ_CP045222.1\|WP_152384121.1\|3818457_3819240_-\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|181517
NZ_CP045222.1\|WP_152384112.1\|3808254_3808770_+\|DUF1833-domain-containing-protein	unknown	unknown	gnl\|CDD\|286019
NZ_CP045222.1\|WP_152384113.1\|3808766_3809111_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_152384114.1\|3809362_3811993_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_152384124.1\|3825307_3826297_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP045222.1\|WP_056316355.1\|3824351_3824936_+\|spermidine-N1-acetyltransferase	unknown	unknown	gnl\|CDD\|237916
NZ_CP045222.1\|WP_062840837.1\|3820359_3821793_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143427
NZ_CP045222.1\|WP_152384125.1\|3826347_3828033_-\|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl\|CDD\|181285
NZ_CP045222.1\|WP_056316357.1\|3824957_3825275_-\|NIPSNAP-family-protein	unknown	unknown	gnl\|CDD\|311781
NZ_CP045222.1\|WP_128828094.1\|3815525_3816053_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_152384116.1\|3813908_3814697_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_063952506.1\|3818149_3818371_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_152384120.1\|3816279_3817536_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271182
NZ_CP045222.1\|WP_062840838.1\|3821894_3822599_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846

Protein	Function_ID	Function_description	E-value
NZ_CP045222.1\|WP_152384115.1\|3812048_3813899_+\|hypothetical-protein	gnl\|CDD\|378931	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.	0.000904017
NZ_CP045222.1\|WP_152384123.1\|3822671_3824168_-\|microcystin-degradation-protein-MlrC	gnl\|CDD\|227763	COG5476, COG5476, Uncharacterized conserved protein [Function unknown].	7.1729e-166
NZ_CP045222.1\|WP_152384122.1\|3819258_3820062_-\|FCD-domain-containing-protein	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	5.59387e-45
NZ_CP045222.1\|WP_152384121.1\|3818457_3819240_-\|3-oxoacyl-ACP-reductase	gnl\|CDD\|181517	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	3.09805e-148
NZ_CP045222.1\|WP_152384112.1\|3808254_3808770_+\|DUF1833-domain-containing-protein	gnl\|CDD\|286019	pfam08875, DUF1833, Domain of unknown function (DUF1833). This family of proteins are functionally uncharacterized and are predicted to adopt an all-beta fold. They are often found in gene neighborhoods containing genes for an NlpC peptidase and a Ubiquitin domain predicted to be involved in tail assembly.	6.67554e-07
NZ_CP045222.1\|WP_152384124.1\|3825307_3826297_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	8.02796e-137
NZ_CP045222.1\|WP_056316355.1\|3824351_3824936_+\|spermidine-N1-acetyltransferase	gnl\|CDD\|237916	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional.	8.66982e-88
NZ_CP045222.1\|WP_062840837.1\|3820359_3821793_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143427	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.	0
NZ_CP045222.1\|WP_056316357.1\|3824957_3825275_-\|NIPSNAP-family-protein	gnl\|CDD\|311781	pfam07978, NIPSNAP, NIPSNAP. Members of this family include many hypothetical proteins. It also includes members of the NIPSNAP family which have putative roles in vesicular transport. This domain is often found in duplicate.	2.79957e-25
NZ_CP045222.1\|WP_152384125.1\|3826347_3828033_-\|thiamine-pyrophosphate-binding-protein	gnl\|CDD\|181285	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated.	0
NZ_CP045222.1\|WP_152384118.1\|3815034_3815529_+\|hypothetical-protein	gnl\|CDD\|226439	COG3926, zliS, Lysozyme family protein [General function prediction only].	3.68977e-53
NZ_CP045222.1\|WP_152384120.1\|3816279_3817536_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.0878e-43
NZ_CP045222.1\|WP_062840838.1\|3821894_3822599_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	3.21781e-110

>NZ_CP045222.1|WP_152384120.1|3816279_3817536_-|tyrosine-type-recombinase/integrase
MAKRGKNLLEDIQIRRWVSAGQPISRTDGDGLTFTLSRAGTATWVLRYQHMKRARELTIGNYPDLTLAAARALARGHRAAIDQGADPALEKQRDKARSEKISNVRALVADFRAKKLEELAADTVTYRNWDLDKVILPKLGAIQVDQVQPSDVVHMLTSAKRTWTISKRILTTAKQLFAHACGLRLIDTNPAAGVDLVSLMGPRPPVKRRVMLTEAELRGLLASIEDIGTENALALRILLATCVRSVELAKARWEYVDLERGTWWVPEEHVKVRRGFTVPLTPTVVGWFRQLQALAGTSEWVLPARHERRRRNQGGDTHVGETTLWAAIRRAFDRGDLDIRRFTPHDTRSTAKGHMRNLGVSNEISELALNHKLKGMEAIYDVRDDIPERRAALELWAAYLESCASGKDWNVTPLRAAS
>NZ_CP045222.1|WP_152384119.1|3816049_3816268_-|hypothetical-protein
MNDNGILEQVQGQYVAEAIKTLPPAVTAEDRDHLVEIDAGHAGRVRLTFRKQKAKRGKFSHWFWQAKRADPA
>NZ_CP045222.1|WP_128828094.1|3815525_3816053_+|hypothetical-protein
MNFDWKSVLGNVAPMLATALGGPLAGGAVAAITRALGLGDDATDAEIAKKLAEADPSTLLQLKKAEQEFAARMAEMGFKSETDLEKIAADDRADARHREIERQDWTPRILAYLVTAGFFGMLSVMVFAAIPAASKEPLYILLGSLGTAWTSIISYYFGSTAGGQKKSELLAKTKP
>NZ_CP045222.1|WP_152384118.1|3815034_3815529_+|hypothetical-protein
MNFDTAFDRLLGHEGGYVDHPDDPGGQTNWGVTIAVARANGYTGPMRDLPRETAKGIYRAQYWDKAQADRMPFPVAFQVFDAAVNHGTGQAAKFLQRAAGVVDDGIIGPKTLAAVAARDAAAILLLFNAEREQFYTDLKTWPSFGKGWSRRVVANLRYAAGDLQ
>NZ_CP045222.1|WP_152384117.1|3814696_3815038_+|hypothetical-protein
MDSQATDIKDLHARIQQWRQEERLDMAAHHAENRSEMEALRREMLALSSAVKTAFPGGDFDGHRRYHELLIAREEQRQQIRREVLTHLLKGSTWAMLIGLVLMVLRHAKDYLK
>NZ_CP045222.1|WP_152384116.1|3813908_3814697_+|hypothetical-protein
MRKIILIGAGLIALCSTVIAATLTPPSLLNPAGSTTGQVIMSSGPSTAPAWGTISLSGLGGTLPIANGGTGATSAGAARTSLGLGTAATANTGTSGATVPLLNVANTWSGIQSFTASINASQTAGIAGTTTNNNANAGVVGEYIESVGSATALTTSTALNAASLSLTAGDWEASGNCSFLPAATTNMTVVLGAISTVSATSPGDPYQAQLSMTFTTGNRQTLILPPRRFSLAATTTIYAVALANFTTSTATAQCILRARRAR
>NZ_CP045222.1|WP_152384115.1|3812048_3813899_+|hypothetical-protein
MATDPISLQQLRNASEDAQDLERYVNDDVPALVQTRLGGAKPNYAKLIADLEQQFEQFLLASGYQDLGEYAAGLTITARNQIFSRGGEMYRANAALSFPYTTTGDWGSEGGNFVAIGDAVLRQQLAESGGSGLVSFLQQGTGAVSRPVQAKLREWISITDYGAVPGGAVDNTASINTALAAAFAAGLPLFIPRGVWMVQDTTGQGAAIINPGVSMYGASKQGSMIIPGPSHPNTSHIMRVKPAANGSLDFWFLKDFMIYPGYSGTIRGASCIYVDTTNSNINAGCVEWSGLHLMPGNDYSIQWVNGAVNFQGNPSNSIFHRNSIWEGMVFTNAGDNIRIVDNAILSSEGTFHAGIVFTAVNASGGVSAGLHVARNASNCDGGFVQIRAGHQFVIADNNYEQSKGPGSGNGAIIDIQGDVATCGGGRISGNAFGVFGTTTINVAIRIANAVGVRVDQNRMLSGITVPVGLRITSSATDTIVGSNAWPTLVTSSHDDSGVGTRGVYQSLTLNTGFTNSPSGQPFSCFKDLQGQVRLGGLISHAGLNTTGLLGTLPVGTRPFFPQTLLAWGLAGGNYRAISVTVGTDGVISVDPGGATLTQLSISGLTFLTSPSIIANV
>NZ_CP045222.1|WP_152384114.1|3809362_3811993_+|hypothetical-protein
MTTASIILQSIFAPTPPNATARNVQQESPNNGLSERTNSVRVNGRVPDVYGQVRSTPDLLAPPYKVFENHVEKEVAYMCIGRGAYEVQDIRDDTTVIPEIAGSSVEVYAPFTSPNSGAAPQLRIGNAINLPVITAKRVNSVNGQVLQPQDVGSVIRRGMIFRSPNEIVSQDPNVDFADLFIPGDTIQVQDAVQTQGTFSYSPPSGAVFRAQNSLTPTWGELDFAGNHGAEWSPGQIVTISNGYVTWTDQTGGEASEPYTANSNVTGVYAVLSSTYFSVGNFTRLRLDISQSFSAWAAFRSAFSEVVGTPTLTRPSDYVQFDLSGSYVVTTVTSGLLTLNNPSAVNSGWTVMQDSYGGQSSVLNPTITTTGERWIGWFTVESVKPITRIISNVVALNGLFKDNGRQQYRQNVTYRIEAQRIDGSGNPVGSVEAFERTIVGSAVSRSTRADTLDAVLGGAASTRWRFRARRLTNSDTGFEGQVIDEIKWRDLYACNSVDQAHFGDVTTVQSVTFATDGALAIKERKLNMLVTRKLPRRISGSTFTSELYATTNVADILSAICLDPLIGNRPASEVDFDNFYQTRDDIVSYFGLDIAQFNYTIDSDNLSFEETVSMIAEAVFCRAYRRGSVIRLFFERQTDDSAILFNHRNKLPGSEQRTEGSAAENDGIEYEWINPANDASETIYLPSDRSAVNPRRIESVGVRIYAQASIHAHREWNKLQFQDVATEFDALPEANLLTVSERILCADNTRAGSQDGEIVGIDATNPRLVTLSQPFDWSTGGPFWIFLQNRDGMVESMLVQSGGSPRLALLSTAPRTAIILRGEGYNPTGYIIGQGASPRQAQPFLITEKGAPNDDGTIPITAINYDDRYYQNDRDFA
>NZ_CP045222.1|WP_152384113.1|3808766_3809111_+|hypothetical-protein
MNIDEFLCREYDRQTYNCLHFAAEVWMRLTGDDRLNMVDEQDFKAGKIASTFRDMKRVAGPTLSPSVALMETLEGDNHIGICWKRRLLHINTSGPQNLCLDAVSAQFKRMRFYQ
>NZ_CP045222.1|WP_152384112.1|3808254_3808770_+|DUF1833-domain-containing-protein
MTDASSEYIDFFFGAPSSVAEIQTLEISQPSFSQVWRLQSSYRNGFTAKLETGEQVNFIYVPMRLKPLEERENLDFGLTVTLGDLGEILPEEIARARAAGTLRTNPPLVKYRAYRSDNLEEPMFGPVSLQARQIARSEDGAKFNATAPEVNVSKTGILYRTDLYPMLLGFL
>NZ_CP045222.1|WP_063952506.1|3818149_3818371_-|hypothetical-protein
MKTQISYRKLDGSDGVALVNGGISDSQQAKQELANWLDLPAADAAGGNPDDVDGRLRRGGIEPGSVEFNHISE
>NZ_CP045222.1|WP_152384121.1|3818457_3819240_-|3-oxoacyl-ACP-reductase
MSSQRPQLNLNQQLVIVTGASRGLGAAIAQAFLREGAKVVINYLNSADRAQALAATAPDRALAVQADVRDPADVAAMVARASQHFGQPVHTIVNNALPAFQFNGDARPHADTLDWAQMNAQLEGSVRAALNTTQAALPGMRAAGGGRIINVGTNLVQNPVVPYHDYTAAKAALLAFTRTLSHELGADGITVNMVSGGLLRTTDASAATPDAVFDMIAAGTPLREVTTPEQFADAVLFFASPWSRAVTGQNLIVDGGLVKG
>NZ_CP045222.1|WP_152384122.1|3819258_3820062_-|FCD-domain-containing-protein
MSNVRDPQLESLLAAATRPRPELDVLAEVASGLGYVRAERFAERVYESLFYAIATGKIAPGNKLPTELELAALFEVSRPVVRQALDRLREDQLVDSIRGSGTYVKSKPDLMGGMPAVDPARRVGHILEGLELRRVIEPECAHLAALRRTSEDLQEMDRMLTGYEEADASGAIAHHHDYGFHRAIASATGNQRFVQVLKSLEYDVSHAVNVMRHLVHSEPWKRTRAAIDEHRHIYQLIRDQDAEGARNVMRAHIEKARSRMLNSGSEH
>NZ_CP045222.1|WP_062840837.1|3820359_3821793_+|aldehyde-dehydrogenase-family-protein
MTQKNFIANQWVAAATGETIPVLNPSDGKPFEELARSNEADVDRAVKAARQAFEGEWGQMAPAVRSRLLMKIAFALLDRQEELAQLESADTGKPIKQARADAAAVARYFEFYAGAVDKLHGETIPYTPGFTVLTVREPHGVTGHIVPWNYPLQIFGRSVGAALAAGNACVVKPAEDACLSLLKLAEIAAEVGLPAGALNIVTGYGHEAGAALSAHPGIDHISFTGSPQTGKMVAHAAAENHVPVTLELGGKSPQIVFDDADLDAAMPVLLGAIIQNAGQTCSAGSRVLIQRGVYETVLKRLSDAFSATVTGPAAADLDVGPLINARQQDRVRGFLAEAEAQGMKVAARGKLKDGTPEAGFYQPPVLFRDVPPDSRLAQEEVFGPVLAAMVFDTEEEALEIANGTLYGLVAGVWTRDGGRQMRLARKLRAGQVFVNNYGAGGGVELPFGGSRQSGYGREKGFEALYGFTSLKTIAIRH
>NZ_CP045222.1|WP_062840838.1|3821894_3822599_+|riboflavin-synthase
MFTGIVQGTAKIAKIADREGLRTFTLDFPPGFCTDLAIGASVSTDGVCLTVTEILSENQATFDVMLQSLAITTLGSYAEGDSANVERAAKDGAEIGGHPLSGHVDFTSQVLMVKSSDTNRLMRFSIPEAFRKYVFAKGYIAINGASLTVSEVNRAEGWFEVWLIPETRRTTVFEDKQVGDAVNIEIERSTQVIVDTVRETVQESLGKLQPLLEAILKEKGLTLEDFVSPQGKLK
>NZ_CP045222.1|WP_152384123.1|3822671_3824168_-|microcystin-degradation-protein-MlrC
MHILVAGFQHETNTFAPSKAGYDNFVRGEGFPAMVRGADMLALREVNIPAGGFINAVAAEGHTVQTVIWAGASPSAHVTRDAYERIAGEILDAVRAGGFDAIYLDLHGAMVTEHLDDGEGELLARVREIVGPGVPVVASLDLHANVTARMLQSADGLVAFRTYPHVDMADTGVLAARLLMARIQAGEQWTRSERRLPFLIPINGMCTMLQPSQGVYALLSEREQTPGVASVSFAPGFPAADFPECGPVVWAYGTDAAAVDAVTESLYARVLELEPEWSPDFLEPAEAVRRAQALAAGATRPVVIADTQDNPGAGGDANTTGMLRALVQADAQNAALGLLYDPEAVRRATQAGVGATVALSLGGQSGVAGDAAFEGEFVVEALSDGKLRFDGPMMHGMDVDLGATATLRIGGVRVVASAGKAQMLDRNLFRVGGVQPEQMAILVVKSSVHFRADFQPIAHEVLVAKAPGPMQADPADLPWTRLEPGMRVRPQGQPFRAA
>NZ_CP045222.1|WP_056316355.1|3824351_3824936_+|spermidine-N1-acetyltransferase
MSATSDIKLRPLERGDLHFVHKINNNDVIMRYWFEEPYEAYDELVALYDRHLHDQNERRFIIEHDTGQPAGLVELVEIDYIHRRAEFQIIIAPSYQGRGYAKAATRIAVGYAFRVLNLHKVYLVVDKDNTAAVHIYERCGFQIEGLLKEEFFSNGAYRDAYRMALLQHDHLRDVGPGAPDAPVLRDWPQEEQAG
>NZ_CP045222.1|WP_056316357.1|3824957_3825275_-|NIPSNAP-family-protein
MLYDVRTYTCRAGTIKKHLALYAEHGYEVQSRHLGKPLAYMQTETGNVNTYMHIWVYDSAADREAKRQALQKDPAWATYLTKSAEAGYLISQENRLMTPTAFFKP
>NZ_CP045222.1|WP_152384124.1|3825307_3826297_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MTKTLTPVRRLAATVLMAAASLGTAATAAAADFPERPLRIIVPFAAGGATDVIARTVAQAMSTRLGQPVVVENKAGANGNIGAVMAARAEPDGYTLLMATSSHAINATLYHKLDYSLTRDFAGLSNLASVPLLLVVNPSVPAKTPQELAAYAKANGNRVNYASGGTGTASHLAGAQFNSLAGAQMTHVPYKGGAQALNDLMGGQVQIMFANLPEVLSQVQAGRLTPIAVTGTQRHSALPNVPAFSEAAYPAMNARSWFGLFVPAATPAPVVEKLSKAVTDSVADPAVQDKLKGLGADPVGDGHAAFQKYVNTEVERWSELVKQSGATAE
>NZ_CP045222.1|WP_152384125.1|3826347_3828033_-|thiamine-pyrophosphate-binding-protein
MNDTSTLMTGGQHVVRALLDHGADTVFGVPGESYLDVLDALYAHSDRIRLVSCRHEGAAAFMAEAHGKLTGRPGICMVTRGPGATNASIGVQTAFQDSTPLIVLVGQVGNDMVEREAFQEIDYRRMFGQFTKWVAQIDSAARVTEYLNRAFSVATSGRPGPVVLALPEDMLTDVAPALPCGTIQVPQAYPAPDALADMRTLLAGAERPLMIVGGSGWTDAGLASLTRFAELNGLPVACSFRRQDLFDNHHAQYVGEVGIGVNPELAEAVRQADVILAVGARLGEMVTGGYSLLQSPVPSQTLIHVLASPEELGRVYQPAVKIQAGMDAFAKTAVELEPVDASPWRAWAQRLHDNYLRYTELPAPRTGLDPARVIAALRDQLDPSAILTNGAGNYSAWAHRYYRFTHPRTQLAPTSGAMGYGVPAAIAAKLRHPDRQVICLAGDGCFLMTSQELATVKQHQLGIVFIVFNNGMYGTIRMHQEVHYPGRTIGTDLCNPDFVAYAQSFGVTAERVQTHEAFTPALARALDSGTPYLIELSLDPEVITPRATLTSLREKARTAGA

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Crispr_ID: NZ_CP045222_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045222_3

5901930-5902034

Orphan

Consensus_repeat	Method
GGCTCGCTTCGCTTTGCCTTGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045222_3

>merge|NZ_CP045222|3|5901930-5902034|CRISPRCasFinder
GGCTCGCTTCGCTTTGCCTTGCTTGGCTGCTTTGCATGGGGCACTTTCTTGGCGCGGGGGCGTTGCTTCGCTTGCCCTTTTGGCTCGCTTCGCTTTGTCTTGCTT

>NZ_CP045222|3|3|5901930-5902034|CRISPRCasFinder
GGCTCGCTTCGCTTTGCCTTGCTT	GGCTGCTTTGCATGGGGCACTTTCTTGGCGCGGGGGCGTTGCTTCGCTTGCCCTTTT
GGCTCGCTTCGCTTTGTCTTGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045222.1\|WP_056326776.1\|5913522_5914101_-\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153243
NZ_CP045222.1\|WP_056326789.1\|5898648_5898975_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP045222.1\|WP_152385299.1\|5908604_5909810_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340913
NZ_CP045222.1\|WP_152385295.1\|5896676_5897951_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_CP045222.1\|WP_081101091.1\|5910938_5911736_+\|D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|236952
NZ_CP045222.1\|WP_128827346.1\|5911814_5912201_-\|ribbon-helix-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226771
NZ_CP045222.1\|WP_152385301.1\|5915744_5916671_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP045222.1\|WP_152385297.1\|5902171_5905627_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224000
NZ_CP045222.1\|WP_152385296.1\|5899017_5901540_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235906
NZ_CP045222.1\|WP_152385294.1\|5894837_5895647_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP045222.1\|WP_056326792.1\|5898018_5898627_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP045222.1\|WP_152385293.1\|5892755_5893388_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045222.1\|WP_056326801.1\|5894039_5894834_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP045222.1\|WP_152385300.1\|5912398_5913424_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP045222.1\|WP_056326773.1\|5914226_5914715_-\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NZ_CP045222.1\|WP_056326771.1\|5914751_5915735_-\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
NZ_CP045222.1\|WP_056326802.1\|5893438_5894014_+\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350857
NZ_CP045222.1\|WP_056326796.1\|5895639_5896680_-\|PhnD/SsuA/transferrin-family-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270367
NZ_CP045222.1\|WP_152385292.1\|5892379_5892745_+\|response-regulator	unknown	unknown	gnl\|CDD\|381118
NZ_CP045222.1\|WP_152385298.1\|5905629_5908293_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274682

Protein	Function_ID	Function_description	E-value
NZ_CP045222.1\|WP_056326776.1\|5913522_5914101_-\|DJ-1/PfpI-family-protein	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	9.27506e-110
NZ_CP045222.1\|WP_056326789.1\|5898648_5898975_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	4.96402e-45
NZ_CP045222.1\|WP_152385299.1\|5908604_5909810_-\|MFS-transporter	gnl\|CDD\|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.81863e-78
NZ_CP045222.1\|WP_152385295.1\|5896676_5897951_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.55146e-146
NZ_CP045222.1\|WP_081101091.1\|5910938_5911736_+\|D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|236952	PRK11669, pbpG, D-alanyl-D-alanine endopeptidase; Provisional.	3.86299e-107
NZ_CP045222.1\|WP_128827346.1\|5911814_5912201_-\|ribbon-helix-helix-domain-containing-protein	gnl\|CDD\|226771	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only].	3.38949e-37
NZ_CP045222.1\|WP_152385301.1\|5915744_5916671_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	6.42653e-69
NZ_CP045222.1\|WP_152385296.1\|5899017_5901540_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0
NZ_CP045222.1\|WP_152385292.1\|5892379_5892745_+\|response-regulator	gnl\|CDD\|381118	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains. Dictyostelium discoideum hybrid signal transduction histidine kinase D (DhkD) is a large protein that contains two histidine kinase (HK) and two REC domains on the intracellular side of a single pass transmembrane domain, and extracellular PAS and PAC domains that likely are involved in ligand binding. This model represents the second REC domain and similar domains. DhkD activates the cAMP phosphodiesterase RegA to ensure proper prestalk and prespore patterning, tip formation, and the vertical elongation of the mound into a finger, in Dictyostelium discoideum. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.71459e-26
NZ_CP045222.1\|WP_152385294.1\|5894837_5895647_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.05691e-113
NZ_CP045222.1\|WP_056326792.1\|5898018_5898627_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	1.63379e-104
NZ_CP045222.1\|WP_152385297.1\|5902171_5905627_-\|AAA-family-ATPase	gnl\|CDD\|224000	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair].	4.95759e-71
NZ_CP045222.1\|WP_056326801.1\|5894039_5894834_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.47488e-71
NZ_CP045222.1\|WP_152385300.1\|5912398_5913424_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP045222.1\|WP_056326773.1\|5914226_5914715_-\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	2.76602e-62
NZ_CP045222.1\|WP_056326771.1\|5914751_5915735_-\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	2.64696e-157
NZ_CP045222.1\|WP_056326802.1\|5893438_5894014_+\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350857	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria. This subfamily contains bacterial heme oxygenase (HO, EC 1.14.14.18), where HO is part of a pathway for iron acquisition from host heme and heme products. Most of these proteins have yet to be characterized. HO catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes heme oxygenase (pa-HO) from Pseudomonas aeruginosa, an opportunistic pathogen that causes a variety of systemic infections, particularly in those afflicted with cystic fibrosis, as well as cancer and AIDS patients who are immunosuppressed. Pa-HO, expressed by the PigA gene, is critical for the acquisition of host iron since there is essentially no free iron in mammals, and is unusual since it hydroxylates heme predominantly at the delta-meso heme carbon, while all other well-studied HOs hydroxylate the alpha-meso carbon. Also included in this family is Neisseria meningitidis HO which is substantially different from the human HO, with the reaction product being ferric biliverdin IXalpha rather than reduced iron and free biliverdin IXalpha. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	5.82999e-43
NZ_CP045222.1\|WP_056326796.1\|5895639_5896680_-\|PhnD/SsuA/transferrin-family-substrate-binding-protein	gnl\|CDD\|270367	cd13649, PBP2_Cae31940, Substrate binding domain of an uncharacterized protein similar to ABC-type transporter for thiamin biosynthetic pathway intermediates; a member of the type 2 periplasmic binding fold superfamily. This subfamily includes the periplamic-binding protein Cae31940 which is phylogenetically similar to the ThiY/THI5 family. ThiY is the periplasmic N-formyl-4-amino-5-(aminomethyl)-2-methylpyrimidine (FAMP) binding component of the ABC transport system (ThiXYZ). FAMP is imported into cell by the transporter, where it is then incorporated into the thiamin biosynthetic pathway. The closest structural homologs of ThiY are THI5, which is responsible for the synthesis of 4-amino-5-(hydroxymethyl)-2-methylpyrimidine phosphate (HMP-P) in the thiamin biosynthetic pathway of eukaryotes, and periplasmic binding proteins involved in alkanesulfonate/nitrate and bicarbonate transport. After binding the ligand, They interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ThiY/THI5 proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.88195e-126
NZ_CP045222.1\|WP_152385298.1\|5905629_5908293_-\|hypothetical-protein	gnl\|CDD\|274682	TIGR03623, TIGR03623, probable DNA repair protein. Members of this protein family are bacterial proteins of about 900 amino acids in length. Members show extended homology to proteins in TIGR02786, the AddB protein of double-strand break repair via homologous recombination. Members of this family, therefore, may be DNA repair proteins.	0

>NZ_CP045222.1|WP_152385296.1|5899017_5901540_-|DNA-polymerase-III-subunit-gamma/tau
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAKSLNCETGITSKPCGVCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRFKVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPADSIVGHLQAVLGQEDVGFEIPALRLIGQAASGSMRDALSLTDQAIAYSAGNLTEDAVRGMLGTIDQRHLVRLLDALSSGDAKGVLAVADELAIRGLSYAGALADLAVLLSRVAIEQRVTGVTAAEDPLAADIARLAQALHPDAVQLFYSVAVHSRGELTLAPDEYAGFIMACLRMLALNGDAGPQTALEAPAAPARQTAAPAASAAIAAPTGAEAGASHPAAASTAASSTAAVSTPAVSTAAVSTAAVPASAQAADAPSADSPSAAAQPAAAGQPIAARPDAGPSGPTAASAPAHNAAADDAPAGNASATANGAATDAAFTSVPNGAAAPTADPVTTGASTAHTAMPGAPAANASAPFDGAAAATPANGSASSPDAAHTASASSANDAAAPAQPAPPAAAAPAQSSAASAPQSADPNSVPPWEDLPADAASPNPASAKAQNSAALAVTPAAAAIAPAVDDADGPPAWVDEEIPFEAEGGFMPDSGFTSDPDDDFETLATSPSPAPAPPAARRDGPAPARKRQSRAPRLADMDAASWPELAARLPVTGLASELARQSEWAGVQGDAIILRVAVKTLAESESRVRLQTVLCEHFGQGIRLDVRVGVTGDATAYAVAQAESAARQLAAENAVADDPFVQALLADFGGHVVPGSIRHVDSSAAA
>NZ_CP045222.1|WP_056326789.1|5898648_5898975_-|YbaB/EbfC-family-nucleoid-associated-protein
MMKGQLAGLMRQAQQMQENMKKAQDALADIQVEGASGGGLVKVTMTCRHDVKRVEIDPSLLADDKDMLEDLVAAAFNDALRKAEATSQEKMASVTAGMPLPPGMKLPF
>NZ_CP045222.1|WP_056326792.1|5898018_5898627_-|recombination-protein-RecR
MDPLLPEPEPLVSLIEALRRLPGVGVRSARRMAYHLLQHDPQGADMLGRALAGAVRDLKHCARCNSFSEDEVCATCSNAKRDPSLLCIVETPADQNMIESSHGYRGLYYVLMGRVAPLEGIGPRELDFDRVIKRATDGVVQEVILATNFTAEGETTAHFLGEALGERGLRVTRLARGVPAGSELEYVDAGTIAWALMERKTT
>NZ_CP045222.1|WP_152385295.1|5896676_5897951_-|CoA-transferase
MSALTGLKVLELGTLIAGPFAARIFGEFGADVIKVETPHGPDGTGGGDPIRSWRHLHEGNSLWWTVQARNKQSIALNLKDPRAQEIARKLALDADVVVENYRPGVLEKWGLGYEQLRAINPALIMVRLSGYGQTGPMKDQPGFGAIGESMGGLRYVSGHPDRPPLRVGISIGDSIAALHGVIGAMMALRHRDATGGRWNGKTGDECQAGQGQMVDVALYEAVFNMMESLVPEYDVAGVVRERTGGALPGIVPSNTYTTRDGQNIVIAGNGDAIFHRLMRAIGREDLAEDPDLVRNDGRARRVQEIDGAIQQWCDGRGIESALEALKRADVPVGKIYSVADMFSDPQFLARRMIEQHRLADGSPVKLPGVVPKLSETPGQTRWVGPKLGEHTEEVLKSLGYDSAAIDELAKTGAIGKSDNQETNQ
>NZ_CP045222.1|WP_056326796.1|5895639_5896680_-|PhnD/SsuA/transferrin-family-substrate-binding-protein
MTVTRRELLKMAGAAGVMGMAPAIVRAQKLEKTKVQIAVGGKPLIYYLPLTIAEVRGYFKDEGLDVSIADFAGGSKALQAVVGGSADVVSGAFEHTLSMHSKGQAYRAFVLQGRAPMIGVGVSKKNIPGYKGPADLKGKKIGVTAPGSSTNMVVSFFLAKHGLKASDVSFIGVGAGAGAVTAVRSGQIDAISNTDPVVSMLEMPGEIQIIVDTRTLKDTQEIFGGNMPAGCLYAPQAFIDANPNTVQALTNAIVRADKWIQKAGPDEIAKVVPETYLLGDPAVYKAALGKSMEGLSPDGMIPEDGAATALKALAAYQTDFDSAKVDPSKVWTNDFARRANEKYANG
>NZ_CP045222.1|WP_152385294.1|5894837_5895647_-|ATP-binding-cassette-domain-containing-protein
MAEAALSLENISCTFVSRDDRSQRYTAVSDTTLAIAPGEFVSVVGPTGCGKSTLLNVSAGLLAPSSGQVKVFGQPLVGINERAGYMFQGEALLPWRSALDNVIAGLEFAGVARSEALDRGREWMRRVGLGGFEGRYPHQMSGGMRKRAMLAQTLIRDPDIILMDEPFSALDIQTRQLMENEVLDLWMAKRKAVLFITHDLDEAIAMSDRVIVLSAGPGTHPIGEFAIDLPRPRDVAEVRIDPRFVELHAAIWGVLREEVLKGYAQQKRA
>NZ_CP045222.1|WP_056326801.1|5894039_5894834_-|ABC-transporter-permease
MPKLNKSGSGSLRIWQLLLLVIILAVWHFASRDPKVAFFFGEPLKVWGRIWAWFVTNADIYTHLAVTLTETVLAFFIGTIAGLGFGLWLGLSPRASAILDPYIKAANSMPRVILAPIFGMWFGLGIWSKVALAVTLVFFIVFFNVYQGVREVSPTLLDNARMLGARKRQLLRHVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSASGVGYLILQAEGTFDVNTVFAGIIVLTAFALILDTIVGVGEKRLMKWQPKSGETEKL
>NZ_CP045222.1|WP_056326802.1|5893438_5894014_+|biliverdin-producing-heme-oxygenase
MISPVHQVLREGTRDRHETLDHGLALADGDVDRGNYLAYLRALLGWLEPLEERLWQLDWPRELRAPERAGKTTWLYEDLQAAGDTAPIVHCAHPPQVAAPDAYALGVAYVVEGSQLGGRFLAKRLQAAAPDLPQRYLRGYEEEVGPLWKAFLLYLDSEAGARDREAQALQGARDAFDSLTGWLRSQGALRA
>NZ_CP045222.1|WP_152385293.1|5892755_5893388_+|hypothetical-protein
MMQSDTLGRLAVKGVQLKVLSQIFPVLRHEVLGPLSSASLAAAMLRQAPEGASDEAVQQRCERLAGDLSDMLDESVNVVRDLEGWLSDGGANVACGDLLQDCRKLMFSHLLLSHQGIRWPEQVAHADVPLFSTRYLVLAWLLCLLPLVPADTHLELDASEPGVWRARVPEGEAASERPPAFDAQEVELLATAAGWRLERQDRCWSLHLPA
>NZ_CP045222.1|WP_152385292.1|5892379_5892745_+|response-regulator
MNEVRAMRVLLVDDNEMGSELLAEFLALSNLETRCAATGAEALELVGTFAPDAVLLDILLPDMDGYELAKRLRERANPPRIYALSGLARHERRDAINGIFTGWIEKPADPDALLAILHEAN
>NZ_CP045222.1|WP_152385297.1|5902171_5905627_-|AAA-family-ATPase
MAEPDRLPHDHAARAAALDPARSFLVQAPAGSGKTELLTDRILALLATVNRPEEIVAITFTRKAASEMHARVLSKLRRGLDAPPEAAHERRSWDLARAALARNAEQGWHLLEHPARLAIRTIDSFCAGLVRSMPWLSELGGMPDITDDARSHYEAAARATLDLADDYEAVRILLRHLDVDVQAAKDAIADMLGQRDQWLPLLRHGSDREAMEAMLAEAIGEDLDALCAAMPYGWSESLCGPARLAAAHLQDGEDDNKLAALLDWTEALQPDAELLDAWRAVAHLLLTSTGSLRKTVNKNLGFPAKCAHKEPFVAWLEGADAQAAWVRRLHAVRDIPAPHFTDAQWEVLGAQLMTLALAVAQLRLRFAEKGEVDFIEIAQRAAAALGSADDPGELLLKLDASIRHLLIDEFQDTSQTQLDLLRTLTAGWQSGDGRSLFLVGDPMQSIYRFRKAEVGLFLEVADIGVGEVKPDFLNLTDNFRSQAGIVDWVNQSFVDLLPRRSDAAAGAIAYSPSTAFHPALPDPAVRFHPAWSREGAPPAEEQAEDIAVGLVRQALIDHKGAKHPVAILVRARSHLGNLTRRLAQEGIRSRAVDLVPLALRPVVADLVQLVRAVSHPADRLAWLSVLRAPYCGLTLTSLQRLFGDDHITPVPVLLERALRIAPQPIATAAPEASGPQGSLFDAPAPEPQAPSAQAILSPDEFARLRQVASVLLDKRNASGAIPFAAWVESLWRRLGGPGLYAGLSVANDAESLFQLVERLAPHGNIDVAALDAGISRLFAAPDAADEDEGAVEIMTMHKSKGLQFETVILYGLHRAPRGDQAPLVRFEQSGGRVLFGPVKPRAETEADPVSRYLGAREARRASYEIDRLLYVAATRARKRLHLVGHVSIDEASGQIKTPPAASLLGRLWPCLTPPIPPSLNGETVQEETDAPEWQGEPLRRIDNAGLAQLQRQSSITMSAGFATATRGAWGEAAEHPAWQLEAGYDAAIGTLAHAWLARIGQDGIQAWPPEALTPRLPAMRRQLTRAGIPASQADAAAEAVLETLQATLADERGLWLLSQTGARREWPLIDAAGKVSVIDLALSTEDGWLIVDYKTGRPHPGESPAAFAIRMRQRHGEQLQRYCTQVTALDGRSARAALYFPRAKAWIDLLE
>NZ_CP045222.1|WP_152385298.1|5905629_5908293_-|hypothetical-protein
MQDAAPSYSDLSLPDIASLPAADTLVLTVNNRLSRRLTLELAGLLRQERQVSELPRILPLSAWLAESANELAFESDEDVPAYRLDSFATQLVWTEAIRLEEAERVLLDASQAARLSMDADLLMDEWALQVPSGADTDEYRGFARWRERYRHTLAGIDAEDANQGYARVVRALEAGRLATPRQLVLAGFTDISPRFQRLLHAFEAQGTRVAQWRDTQRVAAVAQRFEAADQGAEWRAAADWAASRLKADPAGRYAIVSPQLEAESPFARRVLSQALAGRDGAPAFAFNVAVGRPLDEWPMARAALAWLRALAECAQGKGCGVGVLGAALLAGHCAGDVRDRARLAAIDARWRRQGQLHVAPQAWRKLLADLPALAQAWNHATEIWTQGGRQATCDVWMLRMKAALTALGFPGEAPLDSVGYQVMGALGDALGSFSALAPAAGRLGGVAAVNLLESVARSSSFQPQRDPLARLDVLGLLEAEGGYWDGVWLLGLTDDVLPASPKPNPLLPLAVLRQARAPRATPEREREWAEGMFAALCRCAPDIIVSHAHMDGERELRPSPLIAALSLTEWTPARTEAQAVLPQESLDDSQGPPLAAGNRGGGGLDVLDTQARNPLWAFVRHRLGGRELAPYADAATVNVRGQFLHKALEVVWGMMPDQDALHEQLSAGRLPALLEQAVAQAAGEELKEYAPALRALECQRAQAVLASWLDLEAQRLPFAVAQVEKNHQWQRGALNLKLRLDRIDRLPDGRNVIVDYKTGVAAAKPEPDWSRSRPVNVQLPFYASVLADAAGGEAAGLVLAQIHARQVAAQGLADEDLGMPGVTLASESKYFDGLSWPEIRQRWRVAIESLADEYVAGYAANVAYRRDDLKYCDALPFLRLHLDDEDA
>NZ_CP045222.1|WP_152385299.1|5908604_5909810_-|MFS-transporter
MSSQTDTISARTIVLGTLVVLLAMGVRATFGLFMQPMGLTHGWSREVFSMAFALQNLVWGVACIFMGMLADRYGSGRTIALGAVLYMLGLIGTRFATDEATLYLTAGVLVGLGQAGTTFPVILPVVARAVPPAYRSTAMGIASAGGSLGQFAVVPTGQLLISGLDWTGALWVLSLFVACGAPLAYFLRGRPQAHAGPHQSLGTAIKQAVRHPSFHFLFWSYFVCGFHTAFITLHLPAYVTDGGLTAGQGATAIALIGLFNVLGSFYAGKLGGKYSKKRVLAVVYFMRAFGILLLLSVPLTPWVLYAFAAWMGLFWLGTVPLTQGLIGQIYGLRYAATLSGIVFLGHQLGSFIGVWLGGYAYAKTGSYDLVWWLGVALAVIAALLCLPVREQPVAPAQPATA
>NZ_CP045222.1|WP_081101091.1|5910938_5911736_+|D-alanyl-D-alanine-endopeptidase
MPPPAASARAEAAALRSSTAYVQDLETSTVIFAKNENVVRPIASISKLMTAVVVVDANLPMDEMLEITDEDVDELKHTTSRLRVGTKLSRGDMLHLALMSSENRAANALGRHYPGGLRAFVAAMNAKAQSLGMTSTRFIEPTGLSSNNVSSPHDLARLLRAASQRPLIHRYSTDTEYEVEINNRTQTFRNTNLLVRKPDWDIKVSKTGYINEAGECLVMLARINGRDLAIVLLDSQGKLSRIGDAVRIRRIVQSEVAMASIASGG
>NZ_CP045222.1|WP_128827346.1|5911814_5912201_-|ribbon-helix-helix-domain-containing-protein
MCEIFIRATEHSYACETRSLRLHGVATSLRLEHLFWQVLEEIAGRDGLRVTQLIERLYDELVEYRGEAANFTSFLRVCCLRYQLLQAEGRIPRDASVPIRSLNAQAVLEGLPPSLCDAQPVPAKRRAA
>NZ_CP045222.1|WP_152385300.1|5912398_5913424_+|alcohol-dehydrogenase-AdhP
MEKTMKAAVARAFGKPLVIEEVAVPRPGPGELLVKIEACGVCHTDLHAVEGDWPVKPNPPFIPGHEGVGHVVAVGAGVTHVKEGDRVGIPWLYSACGHCEHCLGGWETLCEQQQNTGYSVNGGFAEYALAAADYVGLLPKNVGFVDVAPVLCAGVTVYKGLKMTDTRPGNWVVISGIGGLGHMAVQYAKAMGLNVAAVDIDDAKLDFARRLGAEVTVNAMNTDPAAYLKREIGGAHGALITAVSPKAFEQALGMVRRGGTISLNGLPPGDFPLSIFDMVLNGVTVRGSIVGSRLDLQESLQFAEEGKVHATVSTESLDNINSVFDRMKKGQIEGRIVLDFA
>NZ_CP045222.1|WP_056326776.1|5913522_5914101_-|DJ-1/PfpI-family-protein
MSKRLLMLVGDYAEDYETMVPFQTLLTVGHTVHAVCPDKKAGDTVATSIHDFEGAQTYTEKRGHNFTLNYDFDRVEPSSYDGLVIPGGRAPEYLRLNEKVLDIVREFDKANKPIAAVCHGAQILAAAGVLKGRTCSAYPACAPEVRLAGGTYAEIAVDQAYTDGNLVSAPAWPAHPAWMAQFLAVLGTKITP
>NZ_CP045222.1|WP_056326773.1|5914226_5914715_-|Cys-tRNA(Pro)-deacylase
MSKARHVSETPATQFLKQHKVAYTEHTYDYVDHGGAGEAARQLGLDPHAVVKTLVMEDESAKPLIVVMHGDREVSTKNLARQAGLKKVEPCKPEVAQRHSGYQVGGTSPFGTRKKMPVWVEAEVLTYPAVYINGGRRGYLVGIDPKVLVDLLGARPVTVALE
>NZ_CP045222.1|WP_056326771.1|5914751_5915735_-|site-specific-tyrosine-recombinase-XerD
MSTARQPLASQADIDAFIDAVWLEDGLSANTLAAYRRDLTGFARWLEDPEAYARELADRHGEPERAQTMPVGPAKPIRDAQKADIEAWFAFRHEETRATTANRRLAALRRFYAWALREHRAERDPCLTLVAAKQPPRMPKTLSEQQVDALLRAPDLGQPRGLRDRAMLETLYATGLRVSELVGVRSLDVSLNEGVVRVVLGKGGKDRLVPLGAEAAHWIAQYLNTARPELAAGRVSDALFITSRAEAMSRQAFWQLVKKYAVIAGVHAPLSPHVLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLKALHAAHHPRG
>NZ_CP045222.1|WP_152385301.1|5915744_5916671_-|LysR-family-transcriptional-regulator
MRNGIPNLSALQAFEASARLGSFSRAAEELSLTHSAVYRQVASLEARLGVQLFTRVRRRIVLTDHGAEYAGRIRHHLDQIEKDTFGLVSRTGMGRSIHIAVVPTLATTWLIPRLADFQREHGDITVSLSVRTLPFQFKDQPFDGALYHGDGLWPGTQGGLLFPERELVPVCAPELADRVAQAGGAALTGMTHLHLASRPDAWRQWYAANGHLYGPQAAGGPRYELFTMVMAAVQAGLGVGLMPRFLAQPALDQGALVMPVPQSLAVSQGYYFGYPQRSERSEALKVFESWLKSAAAGVGERLPNRAAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3787481 : 3808770

Pseudomonas_phage(36.84%)

portal,protease,tail,capsid,terminase,head

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152384086.1\|3787481_3788579_-	LexA family transcriptional repressor	A0A1C6ZDG7	Pseudomonas_phage	4.2e-10	27.4
WP_152385471.1\|3788660_3788867_+	hypothetical protein	NA	NA	NA	NA
WP_152384087.1\|3788961_3789477_+	hypothetical protein	B7SYH6	Stenotrophomonas_phage	1.6e-36	43.3
WP_152384088.1\|3789476_3789941_+	recombinase	E5AGF7	Erwinia_phage	2.4e-23	48.0
WP_083714444.1\|3790051_3790390_+	hypothetical protein	NA	NA	NA	NA
WP_152384089.1\|3790495_3791413_+	hypothetical protein	A0A1C9IHW0	Salmonella_phage	9.0e-14	48.8
WP_152384090.1\|3791409_3791901_+	hypothetical protein	A5H1K2	Xanthomonas_virus	5.9e-28	46.6
WP_152384091.1\|3791897_3793676_+	AAA family ATPase	A0A0U4B0G9	Pseudomonas_phage	3.0e-122	40.8
WP_152384092.1\|3793692_3794055_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_152384093.1\|3794051_3794429_+	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	9.4e-26	52.1
WP_152384094.1\|3794469_3794790_+	hypothetical protein	NA	NA	NA	NA
WP_152384095.1\|3794789_3795323_+	hypothetical protein	NA	NA	NA	NA
WP_152384096.1\|3795555_3795849_+	hypothetical protein	NA	NA	NA	NA
WP_152384097.1\|3795845_3796166_+	hypothetical protein	H2BDK0	Pseudomonas_virus	3.3e-16	58.4
WP_152384098.1\|3796234_3796681_+	hypothetical protein	A0A286S1P9	Klebsiella_phage	5.5e-41	58.6
WP_152384099.1\|3796659_3798186_+\|terminase	terminase	B5WZR8	Pseudomonas_phage	1.6e-220	78.3
WP_152384100.1\|3798384_3799650_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	9.6e-107	47.2
WP_152384101.1\|3799646_3800324_+\|head,protease	HK97 family phage prohead protease	A0A2H4JAI0	uncultured_Caudovirales_phage	3.6e-52	49.1
WP_152384102.1\|3800334_3801597_+\|capsid	phage major capsid protein	A0A2H4PI18	Pseudomonas_phage	3.2e-70	41.8
WP_152384103.1\|3801653_3801872_+	hypothetical protein	NA	NA	NA	NA
WP_152384104.1\|3801868_3802195_+\|head,tail	phage gp6-like head-tail connector protein	H2BDB3	Pseudomonas_virus	8.9e-25	61.1
WP_152384105.1\|3802194_3802551_+\|head,tail	head-tail adaptor protein	Q9XJT0	Pseudomonas_phage	2.3e-34	60.0
WP_152384106.1\|3802547_3803045_+	hypothetical protein	NA	NA	NA	NA
WP_152384107.1\|3803047_3803413_+	DUF3168 domain-containing protein	Q9MCA6	Pseudomonas_phage	5.9e-17	37.3
WP_152384108.1\|3803470_3803953_+	hypothetical protein	A0A0U4ISC1	Pseudomonas_phage	2.3e-16	36.4
WP_152384109.1\|3803955_3804285_+	hypothetical protein	NA	NA	NA	NA
WP_152384110.1\|3804589_3805456_+	hypothetical protein	A0A1W5N076	Cronobacter_phage	4.2e-05	69.0
WP_152384111.1\|3807770_3808262_+	hypothetical protein	NA	NA	NA	NA
WP_152384112.1\|3808254_3808770_+	DUF1833 domain-containing protein	J7HXQ5	Acinetobacter_phage	2.6e-18	32.1

DBSCAN-SWA_2

4246430 : 4254098

Moraxella_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152384337.1\|4246430_4247018_+	DUF1949 domain-containing protein	A0A1X9I5T8	Streptococcus_phage	7.8e-19	45.0
WP_006388150.1\|4247126_4247501_-	thioredoxin family protein	V9SJ74	Achromobacter_phage	1.9e-10	27.8
WP_152384338.1\|4247667_4248690_-	MsnO8 family LLM class oxidoreductase	NA	NA	NA	NA
WP_056317352.1\|4248927_4249281_+	VOC family protein	NA	NA	NA	NA
WP_152384339.1\|4249311_4250604_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	4.4e-67	36.5
WP_152384340.1\|4250714_4251746_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-93	51.7
WP_152384341.1\|4251797_4252436_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_062841180.1\|4252530_4253289_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.8e-67	51.6
WP_142056247.1\|4253408_4254098_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.2e-31	46.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045223

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045222

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection