CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045295	Paenibacillus cellulositrophicus strain KACC 16577 chromosome, complete genome	2 crisprs	WYL,csa3,DinG,cas3,DEDDh,RT	0	1	4	0
NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	0 crisprs	csa3,WYL,cas3	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045295_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045295_1

64316-64397

Orphan

Consensus_repeat	Method
ATTTCCTCCGGAGCCGGGATGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045295_1

>merge|NZ_CP045295|1|64316-64397|CRISPRCasFinder
ATTTCCTCCGGAGCCGGGATGGCGATGGATGCAAGAAAGCATCATGAGGAGTGTGTTATTTCCTCCGGAGCCAGGATGGCGA

>NZ_CP045295|1|1|64316-64397|CRISPRCasFinder
ATTTCCTCCGGAGCCGGGATGGCGA	TGGATGCAAGAAAGCATCATGAGGAGTGTGTT
ATTTCCTCCGGAGCCAGGATGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045295.1\|WP_152397565.1\|36186_54489_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225858
NZ_CP045295.1\|WP_152397568.1\|57140_57731_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378696
NZ_CP045295.1\|WP_152397566.1\|54514_55249_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293833
NZ_CP045295.1\|WP_152397578.1\|74436_74760_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_152397567.1\|55270_56227_+\|acyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214838
NZ_CP045295.1\|WP_152402657.1\|72652_73660_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226967
NZ_CP045295.1\|WP_152397569.1\|57863_58277_+\|DUF1348-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP045295.1\|WP_076165307.1\|69668_70670_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP045295.1\|WP_152397575.1\|67655_69629_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173874
NZ_CP045295.1\|WP_152397571.1\|60995_61733_-\|response-regulator	unknown	unknown	gnl\|CDD\|184495
NZ_CP045295.1\|WP_167527035.1\|73659_73899_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_116230386.1\|58351_58729_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_152397574.1\|66563_67403_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_CP045295.1\|WP_152397570.1\|58935_60729_-\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|224877
NZ_CP045295.1\|WP_105442876.1\|56542_56932_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP045295.1\|WP_152397579.1\|74982_77154_+\|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|379143
NZ_CP045295.1\|WP_152397572.1\|61725_63498_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP045295.1\|WP_076165305.1\|70673_71528_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP045295.1\|WP_167527034.1\|64600_66388_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173872
NZ_CP045295.1\|WP_152397576.1\|71552_72551_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223521

Protein	Function_ID	Function_description	E-value
NZ_CP045295.1\|WP_152397565.1\|36186_54489_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP045295.1\|WP_152397568.1\|57140_57731_-\|hypothetical-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	3.63053e-15
NZ_CP045295.1\|WP_152397566.1\|54514_55249_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293833	cd16275, BaeB-like_MBL-fold, Bacillus amyloliquefaciens BaeB and related proteins; MBL-fold metallo hydrolase domain. Bacillus amyloliquefaciens BaeB may play a role in the synthesis of the antibiotic polyketide bacillaene. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.87344e-93
NZ_CP045295.1\|WP_152397567.1\|55270_56227_+\|acyltransferase-domain-containing-protein	gnl\|CDD\|214838	smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes.	1.20589e-68
NZ_CP045295.1\|WP_152397569.1\|57863_58277_+\|DUF1348-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	2.26581e-84
NZ_CP045295.1\|WP_076165307.1\|69668_70670_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.05061e-94
NZ_CP045295.1\|WP_152397575.1\|67655_69629_+\|hypothetical-protein	gnl\|CDD\|173874	cd08509, PBP2_TmCBP_oligosaccharides_like, The substrate binding domain of a cellulose-binding protein from Thermotoga maritima contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of a cellulose-binding protein from the hyperthermophilic bacterium Thermotoga maritima (TmCBP) and its closest related proteins. TmCBP binds a variety of lengths of beta-1,4-linked glucose oligomers, ranging from two sugar rings (cellobiose) to five (cellopentose). TmCBP is structurally homologous to domains I and III of the ATP-binding cassette (ABC)-type oligopeptide-binding proteins and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.43099e-77
NZ_CP045295.1\|WP_152397571.1\|60995_61733_-\|response-regulator	gnl\|CDD\|184495	PRK14084, PRK14084, DNA-binding response regulator.	2.74991e-70
NZ_CP045295.1\|WP_152402657.1\|72652_73660_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226967	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].	1.26426e-115
NZ_CP045295.1\|WP_152397574.1\|66563_67403_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.00807e-26
NZ_CP045295.1\|WP_152397570.1\|58935_60729_-\|carbon-starvation-protein-A	gnl\|CDD\|224877	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms].	0
NZ_CP045295.1\|WP_105442876.1\|56542_56932_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.82895e-31
NZ_CP045295.1\|WP_152397579.1\|74982_77154_+\|PrsW-family-intramembrane-metalloprotease	gnl\|CDD\|379143	pfam13367, PrsW-protease, Protease prsW family. This is a family of putative peptidases, possibly belonging to the MEROPS M79 family. PrsW, appears to be a member of a widespread family of membrane proteins that includes at least one previously known protease. PrsW appears to be responsible for Site-1 cleavage of the RsiW anti-sigma factor, the cognate anti-sigma factor, and it senses antimicrobial peptides that damage the cell membrane and other agents that cause cell envelope stress, The three acidic residues, E75, E76 and E95 in Aflv_1074, appear to be crucial since their mutation to alanine renders the protein inactive. Based on predictions of the bioinformatics programme TMHMM it is likely that these residues are located on the extracytoplasmic face of PrsW placing them in a position to act as a sensor for cell envelope stress.	1.23295e-09
NZ_CP045295.1\|WP_152397572.1\|61725_63498_-\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	0
NZ_CP045295.1\|WP_076165305.1\|70673_71528_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.02605e-60
NZ_CP045295.1\|WP_167527034.1\|64600_66388_+\|hypothetical-protein	gnl\|CDD\|173872	cd08507, PBP2_SgrR_like, The C-terminal solute-binding domain of DNA-binding transcriptional regulator SgrR is related to the ABC-type oligopeptide-binding proteins and contains the type 2 periplasmic-binding fold. A novel family of SgrR transcriptional regulator contains a two-domain structure with an N terminal DNA-binding domain of the winged helix family and a C-terminal solute-binding domain. The C-terminal domain shows strong homology with the ABC-type oligopeptide-binding protein family, a member of the type 2 periplasmic-binding fold protein (PBP2) superfamily that also includes the C-terminal substrate-binding domain of LysR-type transcriptional regulators. SgrR (SugaR transport-related Regulator) is negatively autoregulated and activates transcription of divergent operon SgrS, which encodes a small RNA required for recovery from glucose-phosphate stress. Hence, the small RNA SgrS and SgrR, the transcription factor that controls sgrS expression, are both required for recovery from glucose-phosphate stress. Most of periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.50124e-125
NZ_CP045295.1\|WP_152397576.1\|71552_72551_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.05214e-153

>NZ_CP045295.1|WP_152397572.1|61725_63498_-|histidine-kinase
MFYLLPLMLERVGILIIVAFLLSRMTSFRQTLHHEDRLPAKLLLIVIFGVFGMISNYTGVEIHGGAIGSEIWQAGVQVDSALANTRIMGVAIGGLLGGPLVGLGAGLIAGLHRLTLGGYTAAACSISTILAGLVTGWIGRRFRRSDPGAPWRAVAIGILMECIQMGIILLVARPFDAAVQLVSVIALPMIVMNGFGTLMFMLIIQSILQEEERTRALQTNQVLHIADRTLPFFRQGLNPASCREAASVILEATDADAISITDREQVLTHVGAGSDHHVPLHSLATQLTRSVLEQGRMSVATSKEDIQCFHDGCSLQAAIVLPLQVRSATVGTLKLYYTNPDRLDRVQREMAEGLGRLFSTQLELAEAEMQSRLLRDAEVKALQAQVHPHFLFNAINTISALCRTDPDKARELLIQLGVFFRSNLHGARQILIPLSQELRHVEAYLTLEKARFPDKFEMTFDIEPELANLEIPPFTLQPLVENAVRHAFHGLGPHHKGSVCIAASQKGHEVMIVTADNGKGISPELLDRLGEQAVHSEDGTGTALHNIRKRITEIYGSEGSFHIESDARTPGTRVVITLPLHLARRREMHA
>NZ_CP045295.1|WP_152397571.1|60995_61733_-|response-regulator
MLKGYIVDDEPLARDELAYLLGRTRQVHIVGEADSLETALQSIAEMAPDVVFLDIQLAEDNGLELAKQLSVLEQVPDIVFATAYDEYALQAFEVNALDYILKPFEEKRVRKTVDKVMKLRSAREKRAAPSPPLGPDRTGKLAVSAEERILLIDIDNIVYLGSEDGKSELVTTGDRYKLNEPLVNLERRLAGTSVVRVHRSYLANLNAVTEIQPWFNSACILVMKDESKVPVSRSFTKELKQLLGL
>NZ_CP045295.1|WP_152397570.1|58935_60729_-|carbon-starvation-protein-A
MNAVTIVIASICILMIAYRLYGTFMAAKVLKLSNSTPTPAHTLEDGKDYVPTNKWVTFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVHDAVVLYASMRKQGKSLSEVAKEELGPIAGFCTGLAMLFIIIITMAGLSMVVLHALENNPWGTFAVGITIPIAMGVGLYYKKTGKLKTATTAGFILLMIGVFAGPYIQETAFAQWLTLDAKTLAVILPIYAFFAAALPVWLLLAPRDYLSSFMKIGVFVALIAGVFIINPVIRFPAFTEFAGGGGPVIAGPVWPFISITIACGAISGFHAFVGSGTTPKMINQWTDIKVIGFGAMLVECVVGIMALIAATALHPADYFAINSAPAVFQTLGMHVENLPQLSKEIGMDLEGRTGGAVTLAVGMSYIFTKIPWFSHLAPFFFQFVIMFEAVFILTAIDSGTRVSRYLIQDFFGELYKPLKRTDWLPGNIFASALACFMWGYLLFSGDISSVWALFGVSNQLMASIGLIIGATVILKIADKPIYALTCIIPLAYLYVTVNYAGYWMVRNVYLNPQASGYNVLNGVLSIIMLILGVIILITAIKKWMELLSSPTLHQGSLIP
>NZ_CP045295.1|WP_116230386.1|58351_58729_-|hypothetical-protein
MNNSIRLFKVSGIVHKDQLVVCVKEWKLLKETGRYYEIKSEDANVKRVYKEKLGVIQDDTKAYANGLISNHTFCAHEDIETMKSLIITELDSKISSYLQDLLLNRKALESSDENSISLHITELNR
>NZ_CP045295.1|WP_152397569.1|57863_58277_+|DUF1348-family-protein
MSNIIKPPFNNESALAKVKAAENAWNTRNPDLVAMAYSPDSEWRNRTEFFKGREAIRDFLKRKWAKELDYKLMKELWCYTDNRISVRFEYEWRDADTGQWMRTHGNEHWEFDEEGLMRRRDMSGNDYPIQESDRRYR
>NZ_CP045295.1|WP_152397568.1|57140_57731_-|hypothetical-protein
MTLNNTGSFPLLSGHPSLDLVNTELVRRGIRHDLLIRPEDLTAWLEALNMKESLPSLQHASSEITKEVLNKVKEFRIVVRDMYERLADGQEVTRSWIHLMEACIANAPLSYHFIDGRLVPVPRGSDIDAILSLVALDALRLLEAGELAFLHRCSNPECVLLYVDRSGRRKWCSMKICGNRIKVARNQAKKDHNQDM
>NZ_CP045295.1|WP_105442876.1|56542_56932_+|MerR-family-transcriptional-regulator
MYNIREASTMTGFSLDTLRYYEKMGLIQPASRGTGGVRSYSDANVHQILSIKCLKQSGLSLEDIKDFIADGQCFRNKEALDDEEMKLIQSRMSILAAQLDRLEEQRQALDQTIAEARTKLDYYEKLMQS
>NZ_CP045295.1|WP_152397567.1|55270_56227_+|acyltransferase-domain-containing-protein
MAKPVVFLFPGQGSQYYQMGIELYERHSGFRAWMDRMDRWLYQSAGRSVVLELYDSVRKTGEPLDHLSYSHPAIFMVEYALAQVMIENGVYPDIVLGTSLGEFASCAVAGVIDWETALELVAAQADVVQQTCEPGGMIAIVSDPAMFEQTVELHAHTELAAVNFHSHFVVSGTAEGIRQAEAFLTQTRIAHQVLPVRYGFHSASIDAAETAYKSYLKGIKFYRPQVKLISGLYGMGITSLSSDYVWDAVRHPIRFLEAIQRLSPSEHICVDLGPSGTLANFTKHLWKAVSGSGVYSVLSPFQKDLDRLESTIRRIQQE
>NZ_CP045295.1|WP_152397566.1|54514_55249_+|MBL-fold-metallo-hydrolase
MLRHSTGTCASVEEQERRGAQLSYDVYPLRTVSLPFINYTYIVVDSRTRQGMLVDPAWDIQIITGKLKELQVKVQGILLTHSHQDHVHLASELTEIYGCAVYMSAIEVDDYGFRCKNLIKVYDRERLRFGETTVTCIWTPGHTSGSMCYFLRECVFTGDTLFIEGCGECQFRGSSAEQMFDSIQKIKASVTPDMRVFPGHSFGEPPGASFSHLYDRNIYVQLESRKHFVDFRMRPNQSQAYHFQ
>NZ_CP045295.1|WP_152397565.1|36186_54489_+|SDR-family-NAD(P)-dependent-oxidoreductase
MSRPTQGDGSGKAAPSADILQLTPFYQETDFQANEVQEADAAYTQHILLLCGLGPHFQDLCRSRLPEAQQIVLACSRSERPDLDLMENADRMLLALQEAMKDRGTGKVLVQLVIHSAGELKLQTGLYAFLNTARQENPRIVPQLIEIGEGVNETAFVHWIMAAKSTGSCERLRIQFGSVSRFGWREEKMEERGAVTPWKDGGVYLITGGMGGLGRQFADDICRKASRPVVILSGRAPLDAKKEEQLAFLSSIGANVEYIQADIADKDQVDDLVLLLIRKYGVLNGIIHCAGVIQDGYILRKTVKEMHRVLSPKVTGLTLLDQATQDVALDFLVLCSSIAGSLGNPGQADYALANAYMDAYAAYRNRLVAEGLRFGRTISINWPLWKDGGMEVANHTEDGRNGNRGLTAMETSDGLEVLYFGIATKHDQIMTLSGDIERWRHELLGAAESSRLSESTSSLAQTASSLTHLNSDMLKERTAEQLKELFGKTIQVPSSRISLHEPLESYGLDSLIVNQMNRQLEEIFGDLSKTLFYEYMTLGEVADYLSSVHIDACIRWSGYENESVQETTAPEEQAQSVFPTLVSRRKNRHATSTLPATVQTDRPERQEKPANEPIAIIGISGRYPQADDVQQFWDNLMAGKDCIIEVPEERWTLNGFYTPDPGTAVESGMSYSKWGGFLEGFAEFDPLFFNISPKEALMMDPQERLFLQSCWHALEDAGYTRELLAVRHRRRVGVYAGVTKTGHDLYGPEVRNKGDNAHPYTSFSSVANRVSYFLNVNGPSMPVDTMCSSSLTAIHEACEHLRRDECEVAIAGGVNLYLHPSSYTLLSAQNMLSADGKCRSFGEGANGFVPGEGVGVVILKPLSTAVRDRDNIHAVIRSTSINHGGKTNGYTVPSPKAQGDLIRAALDKAGVDARTITYLEAHGTGTELGDPIEITGLTQAFAVDTKDTGFCAIGSAKSNIGHLEAAAGIAGLTKIVLQMKHRTLVPSLHVSRLNPNISFQKTPFKVQQHMEDWQRPMIQEEGKKHVYPRRAGISSFGAGGSNAHAILEEYLPEEPGITRLSPKQRKQSIIVISAKNEAGLKMRAQQLLKAVHGEFALEANIGDIAYTLQVGREAMEERLAFLAGSMEDLRFTLEQFVSDQQRSLQDGLFRGTVMGVARVEVQTEIDRNIEAWVRDEQFRPVAELWVQGAALDWERLYVDMKPSRISLPGYPFAKERYFIRDQVRRTPIVNKESSAVTMKSTMAQPSTGKGRRAEMLGLQAVQCLELDVKEQISGILHLPVERLNLSANLSDFGFDSISLSQLAARLSGLLGIDLSPSVFFGHSTIEKLLHYMSREFRDVIADFYRESPAAEGVQPVPTRLGTTAVNTDAKGLPRDSLSSPEEHPEPVAIIGISGRFPGARDIEEMWSVLAGGRIEVSEIPEDRFDWRSYYSDSGSAAGSMDSKWLGSLPGVREFDPLFFDIAPKDAETMDPRQRLLLQEAWKALEHAGYGDAQIKQGRIGMFVGAEQGDYQQLLHEQGITSNHNAILAARLSYFLDLKGPVLTVDTACSSGLAAAHQACLSLRSGECDTAIAAGVNLMLTPAPYLAMSKAGMLSKDGKCLTFDKRANGLVPGEAVAVVVLKRLSKAEEDGDPILGVIRGSGINYDGRTNGITAPSAVAQTELIQSVYDQAGIHPEHIECIVSHGTGTKLGDPVEVGALQEAFRRYTDQKGFCAISSNKPHFGHTFAASGLVNLIHLVQAFRHELIPGSTHLEQGNDFIQWENSPVYVSRESVPWPETESGRLGAVSAFGMSGTNVHMVVQSYASCPEPETGVEPSHFLFALSAKTKEALETKARELAEWLQKDSFTEQNLVNVCYTLLTGRQHFQHRMAVVARNVQEAIFLLAGSGGRDKQANRFTGKVPVDFVGQSMIGQYASDLTRRAAEQEEPADTYKEILLVLADLYCQGYSVDGTTLYTGCFPRRIELPSYPFQREQYWAVHQKSMPTTQEQGWLSVQPQSMTPQTESIGGAHEIAESGYRSSPLPEESEVLMSFEEVWAREDLPHDGSLSWKPRTLLCFLNEDEHKQQLLAMVRERSPETRIMFISRHTPDTGLSVDEHTLTVTDPKAYADALANVKERFPEVDSVLYMWAMENPALSCDYVSIVHIIQAMASARLKPKQLLLAGRYSNPLERCHLESWIGFERSLGQVMQGIQVTTAIFAADSGREERPQAWFPHIWDELGAELGQSVLYEGDDRRVCRVHPVADQELSTDERSVSSWIREGGTYLITGGCGGLGLQFAKHAAARHAVNLILTGRSTLEPAKQSEIDALEALGCNVYYLQADLCDIEAMRNGLDEARRRFGKINGVLHAAGISDGRNILQKDAEAFLQVLAPKISGTLILDELLQSDPPEFVCYFGSSSSVLGDFGACDYAVGNRFEMAYAQHRADSVIGKTRIINWPLWKEGGMGFHDPDSTDMYLRTSGLRLLETGEGLDAFDRILASKQTQVLLLPGRPSRVRRFLGISGSEADRIQETQTAFNATVQVLPDSPGGKGRKKEMKGWSIEQCLEWDIKERIVEQLHIPAHHLDSDENWADFGFDSIHLAQFATRLSEYYGLDISPSIFFGQSTIAKLTGYFMDEYEKPMLSFYAEGLDSAAEAAKANEEQILLVSGIREPAEDSSSRPAAPPSPIQAPAAGQAEITRPRVSELSHSVSEAAGDRTEPVAIIGMSGRFPGARTIDEMWTILSEGKSAVSEVPLDRFDWQHHTREAEAAGDKVFCRWSGTIPGVGEFDPLFFEISPKEAEWIDPRQRLLLQEAWRALEDAGYGEQRLKSSTIGMFVGVEEGDYHLLTKEQGSITSNHNAILAARLSYVLNLSGPNMAINTACSSGLVAVHQACMSLRNGECDTAVAASVNLMLTPDAYDGISHAGILSEDGTCYAFDQRANGTVPGEAVAVIVLKRLSKAVADRDPIYAVIRGSGVNYDGKTNGITAPSETAQARLIRDVYRQYHIDPERIEYIVTHGTGTKLGDPVEINALNEAFRTFTDKRRYCAVTSAKTNFGHSFAASGLVSLVNLVMAMRHGVIPASLNFERENEYIRWDDSPFYVNGVRRTWDVSGESTRVGAVSAFGMSGTNAHMVVESYPDAANRATAGNPPYYLLLLSAKTKEALRTRAEDLTEYLAAGDRSDEELKEISYTLLQGRQHFQYRSAVVIRDLSDAQNVLQQSLLGMNSPHYVEGRVSRQFTAQRALNQYVDELMRQSQSQREDAQTYRDTLLALADLYCQGYSLDGDRLFGEDPPGFVHLPTYPFAREYYWVKAVQGQEDAASANVISIREKMDKELSSRDDKEHTLPKDGLISNDVRLRSERDGQMRTNGRHDETTALAAAAVGHLRTIVAEVTGVPYDRLEDEASFEEIGLDSLMITGLNAKVEQWIGTLESTLFYQYNNIQQLADYLAVHHKEAVECLLPDVSEPLPIHISAPKDRKLAKPASLVEETVPAPSHRESQDSATKNEASPDAGAISGLNLSPNGGQNGAVDIAIVGLAGRYPLADTLDQFWSNLYEGKDCIEEIPAKRWPLKGFYEPDRTKAVANGLSYSKWGGFLDRIEYFDPLFFNISPRDAMYMDPQERLFLETAWACVEDAGYTRDSLRQDGYGNQIGVFVGATFNNYQLYMADAAIKANQEEYIATSQMFSIANRVSYVMNFTGPSLAVDTACSSSLYAVHLACESIRNGQSRMAIAGGVNLSIHPSKYVTLCQGQFNASDGRCRAFAEGGTGYVPSEAVGAVLLKPLDEAIRDHDQIYGVIKGTAVSHAGKTNGYTVPSPVSQSQAIDKALGQSGIHPRTISCIEAHGTGTALGDPIEVKGLTDVFTRYTDAKGYCSISSVKSNIGHAEAAAGIAQLTKVLLQMKHRTLVRNVMHAGLNPNIDFGRTPFTVQTATAPWERPVIDGREYPRRSGISSFGAGGANAHVIVEEYTTDPQDHHNDNGTVNRVLILLSAKNEDRLKAQAERLLSSIRRGLWSDEQLPDLAYTLQVGREAMEERLGLIVQSLEELEKKLDAFMEGRGLGKNYVRGQAKRNKEIVSVIEADADFQETVLKWMERDKYDQLLGLWVKGLNVDWSLLYGERKPFRISLPTYPFAGEPYWVPEIENLSAPRDDQAASSGPRSAVLHPLLHRNTSDISGVRFSSTFDGTEFFLADHVVKGKPVLPGVAYLEMAIQAVTLAMPEASAQHRHPDIRLKNVVWARPIAIEGTPVEVHVDLLQDEHGEIAYEIYTVQHQADEQAEMTLHSQGSATVGSRGERPVIDLQKARSRCRPDPIPSEELYALYGSMGIQYGPAHQGIRGIWTGDGQVVAEIALPDAQARTEADFLLHPSLLDSVLQATLGFVMGPDRKAGGETKPGLPFALQELEVYGRCPEAVWAVIRFSEDHKPNSPVQRVDIDVCDEIGTVMVRMKGFSTRLLEAASAVKGPEDDAGVLLFEPIYSESPAPLYGGMPSYASRFVFLCDLEEASAIRINSKESALPTRFVALNMATGNMAERYASYVEAVFTEIRSVLRQKPKDRVLVQVVMPTREEHRYLAGLGGLLKAAQSESSKLVGQVIELDRIDSGLINRLDECAKCPGDSRIRYADGKRWTAGWSELAGKSDMLALPWKDHGVYLITGGTGALGLMFAREITSQVQSPTLILTGRSPQSAAVERAMRDLSDAGAQVIYKQADVADHEQTADLLRWAAERHGTINGIIHAAGIIRDNLIVNKEVDELQGVLSAKVAGLVNLDEASRDLPLDVLIAFSSVAGATGNPGQADYSAANAFMDAYAAYRNQLAQAGQRHGRMLSVNWPLWKEGGMSVDEDVVKIMRQTLGTWPMETGDGIRALYQGLAAGADQVVAMAGLGSKIRARMLPSNPLPSAVQVQDADMPSRETGADTLEQIYTVLRKSVSHLLKVKEEDIDADSEFSDYGFDSISLTQLANLLNEKYPLELTPTLFFEYTTLGSFAEYLLDRHADAFSDRAAPETSQSAAHVSSNVRFADDEDSEDALPNAAEHTIPVMQPRGGYPRRSRAQLSRKSVTDSGHDDLTGPPEPPVVMAIPEPEPVAIVGVSGVFPGAKNIHEFWRNIIDGNSAISEIPSDRWDWRDYAGESTAEGTVTSLKWGGFIDGVKDFDPLFFGISPREAELMDPQQRLLLMEAWKAVEDAGIAVQRLSDHSTGVFVAAGPGDYMSMTGIEQGNPQAMTGVVPSLIPNRISYALNLHGPSEYYETACSSTLVALHRAVRSIQGGECDQAIVGAVNLLISPDPFVGFESMGYLSSEGRASSFQPDASGFVRSEGVGAVMLKPLSRAIADRHEIYAVIRGNGISHGGKGMSLTSPNAQGMKTAMKQAFRQSGIDPRTVSYIEAHGIASPMADGVEIHSLKTGYLEMAEEISSKPWNDPCYIGSLKPLIGHCEVASGMASLIKVLCAFRHKVIPGIHGFTEPSGQISLNGSPLRLTSEHLTWSALTDAEGRELPRRAALNSFGIGGVNGHILLEEYTSQHTEAAQEHPSNRKHLFALSARNGDRLKAYARQMLEYVEGMERLPLADMAFTLQLGREAMHSRLALIAGTREELLAGLSAFLQDGKITGSTVSCAVSIAVGSAESPPKDVSEQDVAEWIAAANIQKLAASWVQGVRVPWEQLYQGSKQRRIPLPTYPFETRRCWREVPMSRRDAEGTAKMNNLAWEETEAAAAAIQAGKRITGVVSALLGMDPEEMNPDLPLDQYGLDSILFMQLLQRLQQHIDPGIDLSSLQECHTLKDLIRIVPQSVVQTQRDNPIDGDQRVTGEVRTWPAFPELILLNAGLRTLRPVFWFHGGLGGVEMYQDLSRQSDRPFYGIQARGWMSERAPLQGVAAMAAYYVHMILSVQPEGPYDLGGYSLGGVLAYEVARQLQELEHKVNTVVMLDSPYGEAFQEGEISRPTAVLQAVNLALASNQFQRPDTFAETLIHRDELELASDEEGLLQQLIQLGYGRGLTKTEQQIRAMIDANIKMQHAYQFDRFSVKPLSNAAEITCYYFRNKRGLIFGELEPYFSIHEDTTPLDQAAYWEEWERQFPNIHMIDIDPSNHMVLLSEPQSYEKIYEFCARLYSKEGVSEAFLNDFKRRTANPISG
>NZ_CP045295.1|WP_167527034.1|64600_66388_+|hypothetical-protein
MDVVHYYNKLNQHFASEPRGSSIQVTMQELEDIWECTRRNAQLLVQKMKELGLIDWQSGLGRGNTSRLVLVADAQELLLDKAKELALKGHVGEAFGLLHAHTDPLAESQFSDWLAGQFGAQKASDHKDILRFPFYRPVLDLEPLFVIRRTETHLIRQILNTLVEFDTTGHVIKPGLAHYWESDREYSEWTFYLRKGVLFHHGKVMTAEDVQFTFQRFGQLNPPDWFMANVARVEVLSDISVRFHLSEPNALFLHLLASERFSIVPKDLDRIAATRDIRRMPVGTGPFVMKENSDNGMILEANERYFQGRPMMDRIEIWVWPNYLEHLKPDRLQERDTQVLYFEPIGKKKTGTLLTRLEEGSTYLTFNLSRDGILHDMKLREAIHLAINREQMVKELGGKREQPSSGFNPYDHDEAYGRGGELMLARACLAESAYRGEMLTLYTYEMTSNELDTEWIRRACEDIGVKMEVHVMPIRELTNPSVFKQADMIYAGEVLGNEPSVSLIEMYRSHYGYIRNHLDDAARDGVDRALSEVLAEPDYTVRRILLRRIEDQLKRDHHLLFMYHSIHIIGHDQSLGGITLDTWGKINYKDVWVKR
>NZ_CP045295.1|WP_152397574.1|66563_67403_+|helix-turn-helix-domain-containing-protein
MDIGFMDCIANFHTNPSDKDNKEGIFQSHSHLSAEITLLVRGEGFYAAGEQNVEVLPGDLLLIPADLKHSYVCIKAWEGYSLHIYDQNLPPYCQYLLSHAFSQRPGPILKASLTPGAAERALAAMHQIEEECRREENSEYSYDLLRNALETLLLAYHTGTCDQATEAPSEHPEEQMIQDALKEIHQNYHTSLKVSDLAANHYLSESIFRKKFTDRIGMSPKQYIISLRIDEAKRLLHTSRKPVEFIASEVGFSSSSRFHDLFVKHVGMTPMEWRRSGES
>NZ_CP045295.1|WP_152397575.1|67655_69629_+|hypothetical-protein
MNLLSGRKRLSGLCLSIVLGAVMIVSGCGTSAPGLVDRLSAGEVKDMQQPIPDAQIKYNKDKIFHVLGGWPKPPLYQGNPFGSGGTGDTNNRYMFEGLFFFIRSMNNVYNRLAESSEDTEQTTTVHLHQNVKWHDGAPFTSKDVWAYYRLNNGAEVTKYLTSIETPDDYTIVFHWMNPAPYPELRKLLLAQDLQGQIPYHIYKKYVDKADALLKEAKPLTDKSKDGPFNLDITDELSKKIALNWNEFTRAGPKIPVGTGPYKFEKVTTTDMLLDKFEDYWRPDAVHFDKIWIKNVPELSAQYALVKAGKLDWYDGTPPKDILESLLKQNKDLVHYRMYDPASVGLMYNIRNKPFDNLKFRQALTYVLDKKKLREIGNFYGQEYPKISMTGIMPSSLEKEVDKSVLDQMTDYTTNLDKAAELLKEIGWTKGSDGLWRDPDGKVPSFIIGAPNNWAPGVNSAQIAAEQFTKFGIPTKLKAVDSTIYFSNADKGQYDMSMDWVDVSWGFQNPWSSMRVLFWQGTKTKVGFPNVKKKDADGNEVDTGKLDLKLKGIDGKVYDIDKEMKRFPYVQDEQERRKIIDNLAWIANENCWGVNFFQNATGAWLNTKTMSGNFPMMDQIVQYNRDMPLATDPDEQLAITHLNHGFNSTYMPEEYWPR
>NZ_CP045295.1|WP_076165307.1|69668_70670_+|ABC-transporter-permease
MSLKGVLKRIGVSLITVFLAMLLTFFLLRMTPGSAIDTWARDFATQRGMSLEEAYRQITAMINYNPKEPIFTQLGRYLGGLLHGNLGMSMIYQNVSVNEIIANALPWTLFVLSVSLVISFLIGINLGAMMAFKRKTVLDPIISIYAILTSSVPNFIVGILLLVIFAFQFGWFPVNGAYDPIVEPGFNLPFILNVLYHGALPILTYVITTIGTWALTMKGSAVNVLGEDYIVAASIRGVSERTLMSRYVKRNAMLPLITTLAVNFGFMLGGSPLIENVFSYPGMGYYIGQATQQRDYTLMQGLLLVTSIAVILANLASDLIYAKLDPRVKLEEG
>NZ_CP045295.1|WP_076165305.1|70673_71528_+|ABC-transporter-permease
MSQGFIDFWQTMYRNKKAFSGMIILAIFIFMAIFGPMMASLDMTVNFDGRYKSPSFAHWLGTDYGGRDTFLQLVYGSRDVLSIGLFAALFTLVLGFVIGAVSGFVGGKTDTVLMFITNLFLTVPSFPVLMIVAALVQIKNPVMFSFILAAWSWAPLARAIRSQLLSLKNREFIIACRIMGLKTPYILFREILPNLTPYLAINFIMAAQGAIVASVGLMMLGLAPYSPTNWGMMIQLAVQNTGGIFNPKGYIYLISPIMCLGLFQMACIFFSNGLEEALNPRLRS
>NZ_CP045295.1|WP_152397576.1|71552_72551_+|ATP-binding-cassette-domain-containing-protein
MMEPLVEVRGLTIEFPMRAGLLRAVNEADFVIPKGQITALVGESGSGKSTMASAIMRAISVPGRVAGGSITFDGRDVMSLSKKELQTYKWEQVSMVFQAAQNALNPVARIKDQIIETFRAHSKSYTEKQMVDKARNLLDYVRLDPDRVLNSFPHELSGGMKQRVMIAFSLLLDPQLVILDEPTTALDVITQAYIFDILKKIHKDMNITMLLLTHDIGVVAKAADRVGVMYAGNVVEAGDVYDMFKRPKHPYTAKLMKAVPSLYEDVSERKGIPGSPPDLLNMPPGCPFHPRCEYAHAKCKEQNPIKVYTPAGHEVACHLYPNPESVAEVRTS
>NZ_CP045295.1|WP_152402657.1|72652_73660_+|ATP-binding-cassette-domain-containing-protein
MYFERSQGMFGPPQKVGAVVDVSLDIHPGEIIALVGESGCGKTTLGSIITGLQKPTSGKVLYKGQEVTKLSGEKANQFRGDVQLVQQDSYAALNPMRTIYQSLSAPILQRKIVRGRKAARARVIELLQTVGLTPPERFLDKYPHQLSGGQRQRILMARAISLNPKIIVADEPVSMIDVSLRISILNLMSELNRKLDIAIIYITHDLATARYIAGRGRMAVMYLGRVMELGGVNDVLSHPKHPYLQALLSAVPTPDPEIAKAMAELPLRSLEMPNAAKPPTGCRFHPRCPMATDRCSSEEPQLRLVGSEQTACHYAEEAHELWQRKMADIGAIKSV
>NZ_CP045295.1|WP_167527035.1|73659_73899_+|hypothetical-protein
MGDFGALSRIVLSMSLVLLLLCFVSLTAVKPGTGPYVVVVLSVWINIILSGCIILVSVWRKMRDAKRRRLEEVQEPDGK
>NZ_CP045295.1|WP_152397578.1|74436_74760_+|hypothetical-protein
MLLRSELRFPDEDQIGSVQVYDDIFMEPEIRIRYLNGLRLSVTRLRGPSPYPVLSHQKAVPSTKELRDDQTEKAVYRFVKDDFLYTLHGDVPEQVISDTVLQIFKNE
>NZ_CP045295.1|WP_152397579.1|74982_77154_+|PrsW-family-intramembrane-metalloprotease
MKEEIDTDTIWNIRNGIRDIAEGVYRWVQETLRRLPWLKTLYTIWCWISLLFFILGLLLYRDSRTMLVQYLWSFYVMLQFWFLCRSKTFTWKQAAMFMLLGIFLVIPVTALTLLAAHGLFGGDTRDTWSQAVLTPIFEEVWKLLPLGLFLLFSRRASSMSLADYTLAGAGAGVGFQLMEELTRRWLNSGIIGRTYGYSVTMLGGETIHWDFWTLFPGRFEESIFPTIMSVSHPVHTGMITLGLGLAVRLRKRLSDAIFALPALLLVWSIIDHAAYNGQGSLPDWFMKISDLTGSGYRTKGVFLLMLAIGLVLDYVSLNRVKSRLPRMEGEGWINPVSELWYMLESLLTRRERLGSVMSWTRERRELGFSLLYGNQEAAALQGDLQTRMLKHFRAAAGVTAALLVVAGLAGFAAYFQAHVHPAYPACFSCMFDSLQNWWDRLGFWEKSAIVLGAFALSLMFVSFWPALGIALTAASIPASGHEIAKDIRDPKRLLTPENVISTLLALALSRVPFGRLAERFGKKGGSRLKDWLEKLLKRRKESKPEPDLPKKPHKPDVEDPPPKKEKDPEEQPPKNDGDDYVHWSKAKYRGVELHDAKNGALGEFDGVDLEKGIFYEAKSAQGLDRIHPKTGKPQQTPQQFTDKQLYQKTKVRINNLMQKAVGTRTTPDGTTEIPTLEQIKGIRHFEFQLDGDSPALRAAAENSLNKLRQEFPDYTFNIRFGVK

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Crispr_ID: NZ_CP045295_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045295_2

3547878-3548041

Orphan

Consensus_repeat	Method
AAATGAGTGTGCACTCACTCA	PILER-CR

2 spacers

WYL,csa3

The CRISPR arrays of NZ_CP045295_2

>merge|NZ_CP045295|2|3547878-3548041|PILER-CR
ATGAGTGTGCACTCACTCATTGTCAAGCGAGTTAATCTGGTAGTTGAACGGGTTCCTTTAGCCAAAAATGAGTGTGTACTCACTCACGGTGAGAATGAAGATGAGCTAGCCTGTTACTTTCTTGGATACTCCGTCCCTCCTCAAATGAGTGTGCGCTCACTCAA

>NZ_CP045295|2|1|3547878-3548041|PILER-CR
ATGAGTGTGCACTCACTCATTG	TCAAGCGAGTTAATCTGGTAGTTGAACGGGTTCCTTTAGCCAAAAA
TGAGTGTGTACTCACTCACGGT	GAGAATGAAGATGAGCTAGCCTGTTACTTTCTTGGATACTCCGTCCCTCCTCAAAT
GAGTGTGCGCTCACTCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045295.1\|WP_152399613.1\|3543011_3543458_-\|Hsp20-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP045295.1\|WP_152403128.1\|3540489_3540960_-\|SgcJ/EcaC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|274053
NZ_CP045295.1\|WP_152399617.1\|3548063_3548498_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_152399611.1\|3538987_3540292_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP045295.1\|WP_152399610.1\|3537786_3538932_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP045295.1\|WP_152399609.1\|3537148_3537814_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238089
NZ_CP045295.1\|WP_152399625.1\|3555279_3557868_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|274963
NZ_CP045295.1\|WP_152399621.1\|3550779_3551472_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_152399615.1\|3545990_3546878_-\|ADP-ribosyl-[dinitrogen-reductase]-hydrolase	unknown	unknown	gnl\|CDD\|377122
NZ_CP045295.1\|WP_152399624.1\|3554008_3554638_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_CP045295.1\|WP_152399622.1\|3551599_3552676_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133022
NZ_CP045295.1\|WP_152399619.1\|3549011_3549419_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_105445150.1\|3554884_3555214_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP045295.1\|WP_152399616.1\|3547240_3547825_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP045295.1\|WP_152399623.1\|3552707_3553724_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_CP045295.1\|WP_152399620.1\|3549702_3550488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_152399618.1\|3548523_3549015_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045295.1\|WP_152399614.1\|3543656_3544598_-\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP045295.1\|WP_152403130.1\|3544745_3545918_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|377658
NZ_CP045295.1\|WP_167527151.1\|3541321_3542710_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958

Protein	Function_ID	Function_description	E-value
NZ_CP045295.1\|WP_152399613.1\|3543011_3543458_-\|Hsp20-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	2.07137e-38
NZ_CP045295.1\|WP_152403128.1\|3540489_3540960_-\|SgcJ/EcaC-family-oxidoreductase	gnl\|CDD\|274053	TIGR02246, hypothetical_protein, conserved hypothetical protein. This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.	6.8566e-21
NZ_CP045295.1\|WP_152399611.1\|3538987_3540292_+\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.05679e-39
NZ_CP045295.1\|WP_152399610.1\|3537786_3538932_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	8.82226e-180
NZ_CP045295.1\|WP_152399609.1\|3537148_3537814_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.39663e-22
NZ_CP045295.1\|WP_152399625.1\|3555279_3557868_-\|metallophosphoesterase	gnl\|CDD\|274963	TIGR04075, Ser/Thr_phosphatase_family_protein, polynucleotide kinase-phosphatase. Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring. [Transcription, RNA processing].	1.61592e-45
NZ_CP045295.1\|WP_152399622.1\|3551599_3552676_-\|glycosyltransferase	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	5.71673e-32
NZ_CP045295.1\|WP_152399615.1\|3545990_3546878_-\|ADP-ribosyl-[dinitrogen-reductase]-hydrolase	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	1.19498e-70
NZ_CP045295.1\|WP_105445150.1\|3554884_3555214_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	5.18888e-14
NZ_CP045295.1\|WP_152399616.1\|3547240_3547825_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.22018e-13
NZ_CP045295.1\|WP_152399623.1\|3552707_3553724_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	2.0408e-43
NZ_CP045295.1\|WP_152399624.1\|3554008_3554638_-\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	3.77946e-62
NZ_CP045295.1\|WP_152399614.1\|3543656_3544598_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.33764e-60
NZ_CP045295.1\|WP_152403130.1\|3544745_3545918_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|377658	pfam06441, EHN, Epoxide hydrolase N-terminus. This family represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (EC:3.3.2.3) comprise a group of functionally related enzymes that catalyze the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarization of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites which arise during the biotransformation of foreign compounds. This family is often found in conjunction with pfam00561.	5.52842e-55
NZ_CP045295.1\|WP_167527151.1\|3541321_3542710_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	3.38017e-134

>NZ_CP045295.1|WP_152399616.1|3547240_3547825_-|TetR-family-transcriptional-regulator
MDLKNKIADAAEQVLLRNGLAKTTTKEIAKAAGCSEGSLYNHFSSKEDLFLHVIRGQLKHLMRTLKSLQALAGKETVRRNLEQVALAALEDFHSSMSLIGSIFSEPGLLLRQREGFELRNEGPHRANEAVEAYLNQEKQLGRIGENTDSRAIADLLLGSCFQHAFQINFLGKEESPEERAQFAARVLDTLSAVL
>NZ_CP045295.1|WP_152399615.1|3545990_3546878_-|ADP-ribosyl-[dinitrogen-reductase]-hydrolase
MQDQMLDRLKGGLFGVAVGDALGGTTEFMSVREVKAQYGYLTEIIGGGVWQLEPGEVTDDTMMTLCVAEGILENPAEPMEAIGRYFLEWYQSRPKDIGNIIRHVFEKYEGDWLEAAFIAHADMGQSGGNGSLMRCLPAVLAYNDPAEVERVTIMQSRMTHYDPRCAEACVIYNRIADRLLRGEDLSEAILAEIKGSEYEGMIEDEPDCPPSGFVVHTFRWVLHILLHATDFSDAVQRAANLGGDSDTIGAIAGGLAGIYYGYEGIPAKYAEAILIKDRLDRVISQLYALRASSSS
>NZ_CP045295.1|WP_152403130.1|3544745_3545918_+|alpha/beta-fold-hydrolase
MFASSQTNPGTIRPFRLETTPAELQDLKQRLSMTRWPDELPGAGWNYGAPISFVKDMAAYWEHSFDWTKQEQRLNSYPQFMTTIDGANIHFFHIRSSEPGAVPLMLIHGWPSSPVEFLKLVGPLTDPTSYGGDAADAFHLVIPSLPGFGLSGPTTDTGWSPFRAAQALDALMTLLGYEQYGVQGGDMGAMIAPEIGRIAAGRVIGVHVNAATMGFVPFGAIEDDVFASLTDAEKVRVGRLEHFMKERFGFNMIQSTRPQTLAYGLHDSPAGLLAWTCELFNGFGDTVDAVDRDAFLTNLMLYWLTGTANSSTRMYYEGAHDPGAWAPKDMSPTPVGVAVFQLSDVAIRRFAEQGNRIVHWSEFERGTHFAAIDAPDLMIKDIRTFFRNVL
>NZ_CP045295.1|WP_152399614.1|3543656_3544598_-|WYL-domain-containing-protein
MKVERLLGITMILLSRRRVNAQTLADKYEVSLRTIYRDLETINAAGIPIVSYAGTDGGYEIMEKYRIERQIVTLEDLKSILVALKGVQASLDDREMDDLLTKIKALVAKSEQDQMEDEGETLVFDTNLWHGGGIKDKSVLVSLRQASKHRSVVSFLYTNTEGTAEQREVEPIGLAWKGYAWYLYAYCRTRQDYRTFRVSRLSGLKVHLEQFPSRGVRMEELDARWGNQETGPAVSLLLRFKQRLRVRVEEAFGVENVETEADGSLLVRASYPDNHWMYGMLLSYGPDLRVLEPAYVAERIRHMAVQTAGNYED
>NZ_CP045295.1|WP_152399613.1|3543011_3543458_-|Hsp20-family-protein
MFDLIPFGKRREDAFGQLVKSFNDVFSDDWFTSFKGSLTSFKTDIRETEQSYLVEAELPGFQKEDIEISYAEPYLTIKAVRKEDHSVDNQDEQVVRRERRYGEYTRSFYVPDIHADGINASLKDGVLNMEIPKQPNQRTKRIQIRDDI
>NZ_CP045295.1|WP_167527151.1|3541321_3542710_-|FAD-dependent-oxidoreductase
MKVAVIGCTHAGTAAVKSIAAQHPEAQITVYERNDNISFLSCGIALHVGGVVKDAGGLFYSNPEELAGLGAVTRMRHEVLAVDTNAKTLNVRNLVTGEEFTDSYDKLVVTTGSWPVIPKMEGIDLDNVQLCKNYAHAQEIIARAADAERITVIGAGYIGIELVEAFHELGKQVTLIDNMDRVMAKYLDRDLTDLAEQALKDRGVQLALGRTVEGFRGSESKVREVVTTDGTFEADMVVLCIGFRPGTDLLKGQVDMLPNGAIIVDDYMRTSNPDVLAAGDSCAVRYNPTGTAMYIPLATNAVRMGTLAGMNLVQPTVRYQGTQGTSAIRLFDWNIASTGMTEAAALAAGLNVKTVTIHENNRPEFMPTYDDVMLKLVFEAAGGRIVGAQVMSKADMTQATNTLSVCIQNRMTVQELAFVDFFFQPHYNKPWNVLNTAGLAAMEEMKKEQNAPEAAVQTKLAV
>NZ_CP045295.1|WP_152403128.1|3540489_3540960_-|SgcJ/EcaC-family-oxidoreductase
MNTNQAQDRKEIEQLFEKLKWAWGKGDGEAYGACFTDKADYVTFQGEHLKGRKAIADVHQELWNGVLRGSTLDGEIAKIDFITPELAIFHGLGAVKMRWQKRAPKKRDSINTNVVVKQNGEWRIAAFQNSRISGPGLMQKIFTKMSSRRAVQQQLR
>NZ_CP045295.1|WP_152399611.1|3538987_3540292_+|MFS-transporter
MSETTVVERVNPLPAPLRQYVESPERQRQLHKRTMLIVIISQIFGGAGFAAGVTVGALLAQDMLGSDSYAGVPSALITLGSAASALIVGRLSQRLGRRTGLAAGFLAGGLGALGVVLAALISNLALLFISLLVYGAGTATNLQARYAGTDLALPTQRAKAISAAMVFTTFGAVAGPNLVNITGRFATSIGFPALSGPFMLAAAAFIIAGVVLLIFLRPDPLIVAKAMAEAQRADESLNGTQNTGVKDAAMNKMGIMIGATVMVLTQIVMVAIMTMTPVHMKHHGHGLGEVGLVIGIHVAAMFLPSLITGVLVDKYGHTLMSYASGITLLAAGLLAGLAPGESMVFLVLALALLGLGWNFGLISGTAAIVDATPPHTRAKTQGTVDVLIALAGASGGALSGMIVSQSSYSTLSLAGGFLSLLLIPVIVWSRKEKA
>NZ_CP045295.1|WP_152399610.1|3537786_3538932_+|IscS-subfamily-cysteine-desulfurase
MAGISSTEVTKHIYLDYNASTPLDPEVLQEMLPFFEQHYGNPSSSHWAAASLKETIEHARSRIAAAIGAKSSEVIFTSGGTEANNHALKGVYFASNQPRRHIITTTIEHPAILNPCAFLETLGAEVTYVPVDHWGRVSPADIERAIREDTILISVMHANSEVGTIQPIEEVASIAKRYDILMHTDAAQSFGKIQVDVDALGVDLLSIAGHKLYAPKGIGALYVREGTALAPFVHGAGHESGRRAGTENVPYIVGLGKAAALAAQKVGSREIRNLREALKEGLKEAFGDRVRFNGDPGNHLPNTLNVSFLGLSGQEILSRFPEIAASTGSACHSGSTTLSPVLRAMGLSDYEGLGAIRFSLGRYTTTEEVETVISLFQDRLQ
>NZ_CP045295.1|WP_152399609.1|3537148_3537814_+|metalloregulator-ArsR/SmtB-family-transcription-factor
MDHDFPVRAFKDDLYRQFARIGKCLSSDKRLELMHLLSQGPKSVEKLAEATEMSVANVSRHLQILLDANLVKYSKRGTYVIYCLAGPHIEGFLNALWQMSETQLADITRVKNDFLSQCEDVQTLSLNEVLCKMDEGSMILLDVRPADEFEAGHIPGAISVPMEEIHQYMQSLPKETPIAAYCRGPYCVAAAEAVEKLQREGFTAFRVEEGVYEWREFQAQR
>NZ_CP045295.1|WP_152399617.1|3548063_3548498_+|hypothetical-protein
MQSQNYKNHVRMVPAFHFFLVPLGIITLIASLIHLFVAEMRGISLFSSLLFVSVSLMAVMTMIFARRFACKAQDRAIRTEENLRCFALTGKLLDPRLTTNQILALRFAPDEEWMALCDKAVNDHLTPESIKRSIKAWKADLERV
>NZ_CP045295.1|WP_152399618.1|3548523_3549015_+|hypothetical-protein
MKHLSETLKERTLHVLAAHAQQYIDDQWKPVWDRHIEETERIFAKGGDSAYGFYCLKLFQPLAAEIVEAGLVTRPVLPGIFPQSEEHWGPWENRERRFWSVIQQENGKAIGTLITRFFHDHTRLRLPRQPHVYAIHETDPAEISRILIQADPCVLDSRTVGEA
>NZ_CP045295.1|WP_152399619.1|3549011_3549419_+|hypothetical-protein
MMVNRSYSRIARICFMTLAWLFTISVALQVFLAGLALFVSPDNWLIHANFARYFSLLPLIMAVLAWTARLPGKMIRRSLGLLGMTIGMFLTAVLSSRIGMLSALHPVIAIMLFWSCTLILRSTWEDSVMNATLNH
>NZ_CP045295.1|WP_152399620.1|3549702_3550488_-|hypothetical-protein
MVINKLALFSTSILMFGFLVGCSKDQTINSPLIGTEATKNSQVTTHLQQETRVDTADPSLDAKSWSSENKEVKLTPVKEGQYSYESVAVDVSGVNKAFDWSFSTTEDPRIYYTDVTGDGKEEAVIILNKGKGTGLNIDELHVLDGTDLSEIKVQSYQEIVAGQIETGVTRKNDQTLAIKVNSQGKEHQFDYQVAGINFKQDKLSFGGVVYYWMKNQQIVTTLGASVGISPQYVGDFQITYKFDPAENKLIADQIRFEPVHR
>NZ_CP045295.1|WP_152399621.1|3550779_3551472_+|hypothetical-protein
MSDEQWLKVSDLAGQLEIPQPTIRRYMDRHGHHLHTKKQHKSYLISSASIPTLARIRDEYSKGLNGEQVEEVLLGQSSTITTVSDTSVHKDERVSDHLAEALSELEKSVIDRFNNQEQFNQHLLELLQREQEKVERLTELLMKQTEAAASLSPAVQTQSRKQADHLTERRVKRQLESEALELWLNKPALERTKRNVLFQRKEDSEAKEKFVRDYVLEHYVSRLNEEFNRS
>NZ_CP045295.1|WP_152399622.1|3551599_3552676_-|glycosyltransferase
MTTVLIPAYEPDERLLQLIADLKAACRCRIVVVDDGSGEAYGELFHSARQAGCIVLTHDHNLGKGRALKTGFAFLKKAGETGGIVCADSDGQHLPADIVRIAAAVDEHPDHIVLGCRHFTGRVPLRSRFGNQATRLVYALTTGRSVTDTQTGLRGFSPAMLDWLCGIPGDRFEYEMNMLLQARGDGYPIHEVPIDTVYLEKNKSSHFRPVADSIRIYAPILKFCSSSVLSAGLDFLMLFVLQFVTGSLLAAVVGSRLCSAIFNYAMNRRYVFVKKDAPRLIESAPKYFALVALVMGLNYGLLVLFHGILVIPLFIAKLLTEGSLFVFSYWCQRKFVFRSRSRAGGRPPKAYFKRYKKV
>NZ_CP045295.1|WP_152399623.1|3552707_3553724_-|phosphodiester-glycosidase-family-protein
MNNKKKKSKRILLISLTLSVATVGSILYGLADRYLIPHVEEVVAQPSTAAAISSSASGRQSASTTKTAATNTSTNTESAASTASAVNATSDDWNYKSDNVDISIKQVETGTGADKITYYVADVQLKNASNLRTAFADNSFGRNITEHTSEIASANNAILAINGDYYGFRNDGVVIRNGTLYRDEPARDGLALFGDGTMKSYNEEEVSAEDLLAQGVTNTFSFGPVLVKDGTAVQNFDNVKIDTNFGNRTIDESNPRTGIGIISASHYVFVVVDGRQQNYSRGMTLNEFANLFEDLGATEAYNLDGGGSSTMYFMGRVVNSPGGKGQERGVSDIIYVGE
>NZ_CP045295.1|WP_152399624.1|3554008_3554638_-|HD-domain-containing-protein
MGIHTYFQSLNDLERIIRCPGKFKFEEHSVSAHSWKVVQYAKTLADIEETNGVTVDWKKLYEITSSHDYGEIFIGDIKTPVKHHSLELRAMLQQVEEGMVAHFIDEHIPSEFQPIFRRQLREGKDDSVEGRILEVADKLDQIYEAFTELQRGNTEKEFVVMYRDALIKIKGIKLHCVDYFLQYILPDLVSEGSRSPIDIEKITKEALAT
>NZ_CP045295.1|WP_105445150.1|3554884_3555214_+|winged-helix-turn-helix-transcriptional-regulator
MSENNENRDVFDAVADPTRRRLIRLLSEAEELPLHELTPHFQMGRTAVSKHLTILKEAGLVVDRKVGRETRFRLNASPLQEIQDWVAYYTQFWSTNMLRLKQLLEEEEE
>NZ_CP045295.1|WP_152399625.1|3555279_3557868_-|metallophosphoesterase
MEIRTKMHTIFMLVGSTECGKTTFAQDVLIPGLRFEDETSKLKANIQYLSSDRIRQEVLGYDYDKYDQVMLEASEQAFHLLFERLKMVTSFPVNADFVVVDTTGLAEDFREKVREIARSNHYNLEVIVFDYRKREDYYASERSKRLITNHINRLKKDVLGALPREGYEKIHKVRAKDFYRPEESSKANPDYRVMIEDLEAYRETVLPHGPQYIIVGDVHECVEELKGLLLSYGFRMEAGKLLAGEKLRPTKVILAGDWIDKGKQTREIIEFLYENQEHFLFVLGNHENFVYKYLRGEIQGVDQELLQTYFDSTETLANDAELLRKFNALVEKAKPFYHYVGTDGPSYYVTHAPCLKKYIGKLDAQSARHQRNFRIDREAPLEEQLSFLKDEAVGNHPYHIFGHVAAKQAFRIRNKIHLDTGAVHGNGLTSVTISFKPFMKSHKSRTSVLTEELPTLFQEKRKVSVQDLEEDDIRRLHYCSRHKINFISGTMSPADKDMERSELESLKRGLDYFKENGVLKVALQPKYMGSRCNIYLHPDIEQCFAVSRNGYKVKQVDLTEVYHRLLAKFGPYMQERGIRMLILDGELMPWNALGEGLIQRQFKPIEKALEGELSFLQDHGFETALQSLTEQYQASGFEQDQYRMPKKDLNDKYGANLYQNYKHMHEIVETSVSLAEHSEAYETYKRQLELYAEAGEMEYKPFAILKIVFENGGEELPQWTTSEMYGFLSDDESVSLDLSEPESYAEAERFFAKLTTEKHMEGVVIKPEAWDGRTVPYMKVRNPDYLSIIYGYDYRFPHKYRKLLKQKSIARKLRTSQNEYRLGLWMLGVKYDEIEPMHAAYQEAAANLLFEVAQEQEIDPRL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045295_1	1.1\|64341\|32\|NZ_CP045295\|CRISPRCasFinder	64341-64372	32	MG945651	UNVERIFIED: Microviridae sp. isolate 1160-1602, partial genome	1795-1826	11	0.656

1. spacer 1.1|64341|32|NZ_CP045295|CRISPRCasFinder matches to MG945651 (UNVERIFIED: Microviridae sp. isolate 1160-1602, partial genome) position: , mismatch: 11, identity: 0.656

tggatgcaagaaagcatcatgaggagtgtgtt	CRISPR spacer
aagatgcaagagagcatcatgaagacaaacga	Protospacer
 .*********.**********.**  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1182428 : 1191546

Staphylococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152398309.1\|1182428_1183619_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	9.6e-08	30.4
WP_105444660.1\|1183777_1184251_-	sporulation protein YtfJ	NA	NA	NA	NA
WP_167527087.1\|1184372_1185056_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_152398311.1\|1185195_1185795_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.8e-16	32.7
WP_145158443.1\|1185763_1186558_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.4e-09	34.0
WP_089548072.1\|1186682_1187150_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.2e-45	60.9
WP_152398312.1\|1187170_1188409_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	7.2e-115	53.0
WP_152398313.1\|1188465_1189131_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.1e-36	42.1
WP_152398314.1\|1189234_1190344_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	7.2e-66	39.5
WP_076170052.1\|1191114_1191546_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.6e-21	46.5

DBSCAN-SWA_2

2812864 : 2823983

Prochlorococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152399218.1\|2812864_2814412_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.2e-74	51.6
WP_152399219.1\|2814966_2815584_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-23	36.5
WP_152399220.1\|2815583_2816624_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.8e-69	45.5
WP_105442469.1\|2816767_2818249_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.9e-50	32.4
WP_152399221.1\|2818233_2820477_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.6e-166	42.7
WP_076176811.1\|2820454_2821144_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_076176812.1\|2821149_2821395_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	1.1e-06	36.4
WP_152399222.1\|2821510_2822398_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.9e-37	32.2
WP_152399223.1\|2822687_2823983_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.1e-20	25.7

DBSCAN-SWA_3

3602521 : 3610558

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_105445130.1\|3602521_3603373_-	ABC transporter permease	Q6GZ02	Mycoplasma_phage	1.9e-10	21.7
WP_152399645.1\|3603369_3604338_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	3.6e-29	33.2
WP_152399646.1\|3604629_3605385_-	SIMPL domain-containing protein	NA	NA	NA	NA
WP_152399647.1\|3605571_3607110_-	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-07	55.9
WP_076173171.1\|3607352_3607622_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_116233099.1\|3607722_3608652_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.8e-52	36.9
WP_076173173.1\|3608657_3609644_-	YvcK family protein	A1IMD5	Streptococcus_phage	9.2e-57	38.4
WP_152399648.1\|3609658_3610558_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.8e-09	33.6

DBSCAN-SWA_4

5198764 : 5205673

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076170461.1\|5198764_5199640_+	glucose 1-dehydrogenase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	2.2e-54	42.6
WP_152400983.1\|5199818_5200478_-	5'-deoxynucleotidase	A0A2L0V156	Salmonella_phage	1.0e-06	41.0
WP_152400985.1\|5200722_5202528_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	6.5e-40	35.9
WP_076170458.1\|5202693_5203428_+	response regulator transcription factor	W8CYM9	Bacillus_phage	5.5e-38	34.8
WP_167527205.1\|5203581_5204772_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-09	47.1
WP_076170457.1\|5204917_5205673_+	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-17	34.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045295

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection