CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045300	Kosakonia arachidis strain KACC 18508 chromosome, complete genome	0 crisprs	DinG,cas3,DEDDh,csa3,WYL,PD-DExK	0	0	6	0
NZ_CP045299	Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1736697 : 1744614

uncultured_Caudovirales_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_090118632.1\|1736697_1736952_+	DUF1471 domain-containing protein	A0A1B2IB27	Erwinia_phage	2.1e-05	44.1
WP_090118630.1\|1737055_1737412_+	helix-turn-helix domain-containing protein	D0R0F8	Streptococcus_phage	7.0e-07	35.9
WP_090118627.1\|1738071_1739199_+	porin OmpC	Q1MVN1	Enterobacteria_phage	4.5e-100	51.9
WP_090118625.1\|1739405_1739660_+	DUF1471 domain-containing protein	A0A1B2ICL8	Erwinia_phage	1.9e-06	49.1
WP_090118623.1\|1739744_1740170_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-50	70.7
WP_090118621.1\|1740182_1741472_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	1.4e-166	71.6
WP_090118619.1\|1741515_1741836_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	2.0e-21	47.5
WP_090120638.1\|1742014_1743421_-	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_090118618.1\|1743432_1744125_-	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-31	33.8
WP_043954427.1\|1744281_1744614_-	helix-turn-helix domain-containing protein	D0R0F8	Streptococcus_phage	4.7e-05	29.5

DBSCAN-SWA_2

3009099 : 3103317

Escherichia_phage(45.45%)

lysis,protease,portal,plate,tail,integrase,tRNA

attL 3053367:3053408|attR 3077741:3077782

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_090125957.1\|3009099_3010200_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_043955909.1\|3010237_3010603_-	YijD family membrane protein	NA	NA	NA	NA
WP_090125960.1\|3010602_3011256_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
WP_090125963.1\|3011452_3012853_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
WP_090125967.1\|3012835_3013753_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
WP_090126267.1\|3014012_3015386_-	argininosuccinate lyase	NA	NA	NA	NA
WP_090126270.1\|3015503_3016280_-	acetylglutamate kinase	NA	NA	NA	NA
WP_090125970.1\|3016290_3017295_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_090125973.1\|3017463_3018615_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_090125976.1\|3018878_3021530_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_090125979.1\|3021624_3022476_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_090125984.1\|3022693_3023356_+	fructose-6-phosphate aldolase	M4SLG0	Cyanophage	2.5e-29	34.4
WP_090125987.1\|3023366_3024470_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_090125990.1\|3024555_3025446_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_090125993.1\|3025658_3028091_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
WP_090125996.1\|3028093_3029254_-	cystathionine gamma-synthase	NA	NA	NA	NA
WP_007369220.1\|3029517_3029835_+	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
WP_007369223.1\|3030140_3030353_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_090125999.1\|3030560_3032753_+	primosomal protein N'	NA	NA	NA	NA
WP_090126002.1\|3032877_3033903_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_090126004.1\|3033996_3034986_+	cell division protein FtsN	NA	NA	NA	NA
WP_090126007.1\|3035079_3035610_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_090126010.1\|3035620_3036952_+	HslU--HslV peptidase ATPase subunit	A0A173GFL6	Erwinia_phage	1.1e-44	28.7
WP_090126014.1\|3037018_3037948_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_007369230.1\|3038040_3038526_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_090126017.1\|3038709_3038955_-	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_090126019.1\|3039380_3040229_+	aquaporin	M1HWZ0	Paramecium_bursaria_Chlorella_virus	1.5e-15	28.2
WP_090126022.1\|3040250_3041759_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_090126028.1\|3041861_3042872_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_090126031.1\|3042968_3043715_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_090126034.1\|3043715_3044135_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_090126037.1\|3044247_3044847_+	YiiQ family protein	NA	NA	NA	NA
WP_007369238.1\|3044954_3045722_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_090126040.1\|3045759_3047064_-	citrate transporter	NA	NA	NA	NA
WP_090126043.1\|3047137_3047896_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_090126046.1\|3048020_3049010_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_090126049.1\|3049156_3050119_-	6-phosphofructokinase	NA	NA	NA	NA
WP_090126052.1\|3050317_3051202_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
WP_090126055.1\|3051367_3053167_-	LTA synthase family protein	NA	NA	NA	NA
3053367:3053408	attL	NA	NA	NA	NA
WP_090126058.1\|3053523_3054177_-	hypothetical protein	NA	NA	NA	NA
WP_090126061.1\|3054274_3054493_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	7.0e-34	90.3
WP_090126064.1\|3054573_3056136_-\|tail	phage tail tape measure protein	A0A0F7LDR0	Escherichia_phage	4.2e-96	75.4
WP_090126067.1\|3056128_3056248_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.7e-13	92.3
WP_090126070.1\|3056280_3056556_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.6e-33	82.4
WP_090126073.1\|3056617_3057136_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.2e-87	90.7
WP_090126076.1\|3057149_3058340_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	2.3e-203	88.6
WP_167518544.1\|3058468_3059077_-\|tail	tail fiber assembly protein	Q2A0A8	Sodalis_phage	2.1e-19	39.2
WP_167518545.1\|3059076_3060945_-\|tail	phage tail protein	S4TP62	Salmonella_phage	3.5e-89	78.0
WP_090126080.1\|3060955_3061486_-\|tail	phage tail protein I	Q37841	Escherichia_phage	7.1e-88	84.0
WP_090126083.1\|3061478_3062387_-\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	4.3e-133	79.8
WP_090126086.1\|3062391_3062736_-\|plate	baseplate assembly protein	A0A0F7LDQ1	Escherichia_phage	1.5e-38	70.4
WP_090126273.1\|3062732_3063368_-\|plate	phage baseplate assembly protein V	A0A0F7LDY9	Escherichia_phage	9.1e-98	85.8
WP_090126088.1\|3063486_3064029_+	hypothetical protein	NA	NA	NA	NA
WP_090126091.1\|3064025_3064427_+	hypothetical protein	NA	NA	NA	NA
WP_090126094.1\|3064427_3064871_-	phage virion morphogenesis protein	O80313	Escherichia_phage	8.7e-47	66.7
WP_090126097.1\|3064863_3065331_-\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	7.2e-68	81.9
WP_090126103.1\|3065438_3065852_-\|lysis	LysB family phage lysis regulatory protein	A0A0F7L9Y0	Escherichia_phage	5.4e-43	68.6
WP_090126106.1\|3066511_3067549_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	2.1e-160	77.9
WP_090126108.1\|3067866_3068589_-	hypothetical protein	NA	NA	NA	NA
WP_090126111.1\|3068899_3069154_-	hypothetical protein	NA	NA	NA	NA
WP_090126114.1\|3069300_3070812_-	hypothetical protein	Q38324	Lactococcus_phage	6.4e-25	26.9
WP_090126117.1\|3071297_3073544_-	replication endonuclease	S4TTC1	Salmonella_phage	0.0e+00	84.7
WP_035889134.1\|3073533_3073809_-	DUF5405 family protein	M1TAP2	Escherichia_phage	3.4e-33	75.8
WP_090126120.1\|3073805_3074030_-	hypothetical protein	S4TRY6	Salmonella_phage	1.2e-23	75.7
WP_090126123.1\|3074034_3074331_-	DUF5405 family protein	A0A0F7LCL4	Escherichia_phage	2.3e-27	69.7
WP_090126126.1\|3074330_3074555_-	DUF2732 family protein	Q7Y4C2	Escherichia_virus	2.5e-26	84.7
WP_090126129.1\|3074618_3075119_-	replication protein B	M1SV55	Escherichia_phage	6.5e-75	80.7
WP_090126132.1\|3075288_3075561_-	hypothetical protein	Q1JS44	Enterobacteria_phage	4.2e-44	93.3
WP_090126135.1\|3075714_3076008_+	helix-turn-helix domain-containing protein	Q1JS21	Enterobacteria_phage	1.6e-36	75.3
WP_090126139.1\|3076077_3077058_+\|integrase	tyrosine-type recombinase/integrase	Q858U3	Yersinia_virus	5.4e-174	92.3
WP_090126142.1\|3077061_3077298_-	hypothetical protein	NA	NA	NA	NA
WP_090126145.1\|3077281_3077617_+	hypothetical protein	NA	NA	NA	NA
WP_090126148.1\|3077807_3078302_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
3077741:3077782	attR	NA	NA	NA	NA
WP_090126152.1\|3078453_3079152_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	2.4e-06	30.3
WP_090126155.1\|3079148_3080522_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.2e-15	24.1
WP_090126157.1\|3080554_3081229_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_090126276.1\|3081389_3082280_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_090126159.1\|3082385_3083369_-	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_043955942.1\|3083627_3084248_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	1.2e-62	58.4
WP_090126166.1\|3084537_3085572_+	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA
WP_090126168.1\|3085572_3086421_-	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
WP_090126170.1\|3086494_3087331_-	HTH-type transcriptional activator RhaS	NA	NA	NA	NA
WP_090126173.1\|3087631_3089101_+	rhamnulokinase	NA	NA	NA	NA
WP_090126176.1\|3089097_3090357_+	L-rhamnose isomerase	NA	NA	NA	NA
WP_090126179.1\|3090505_3091336_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
WP_090126183.1\|3091552_3092701_+	lactaldehyde reductase	NA	NA	NA	NA
WP_090126186.1\|3092697_3093012_+	L-rhamnose mutarotase	NA	NA	NA	NA
WP_090120483.1\|3093350_3093563_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_090126190.1\|3093677_3094517_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_139234448.1\|3094755_3097806_+	formate dehydrogenase-N subunit alpha	A0A077SK27	Escherichia_phage	7.2e-07	23.9
WP_090126196.1\|3097818_3098721_+	formate dehydrogenase subunit beta	NA	NA	NA	NA
WP_090126199.1\|3098717_3099353_+	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
WP_090126202.1\|3099349_3100279_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_090126210.1\|3100578_3101490_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_090126215.1\|3101507_3101846_+	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_152406447.1\|3101893_3102835_-	fatty acid biosynthesis protein FabY	NA	NA	NA	NA
WP_090126221.1\|3102879_3103317_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA

DBSCAN-SWA_3

3739825 : 3752732

uncultured_Caudovirales_phage(83.33%)

protease,head,capsid,portal,tail,terminase,integrase

attL 3739599:3739646|attR 3755991:3756038

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3739599:3739646	attL	NA	NA	NA	NA
WP_090121495.1\|3739825_3741247_+\|integrase	integrase family protein	H7BV31	unidentified_phage	2.6e-07	28.4
WP_167518588.1\|3741609_3741969_+	hypothetical protein	NA	NA	NA	NA
WP_090121494.1\|3742111_3742321_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_090121493.1\|3742422_3743277_+	hypothetical protein	Q8HA02	Enterobacteria_phage	4.9e-38	60.4
WP_090121491.1\|3743260_3744271_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_044179410.1\|3744267_3744465_+	hypothetical protein	NA	NA	NA	NA
WP_090121490.1\|3744457_3744769_+	hypothetical protein	NA	NA	NA	NA
WP_044179416.1\|3744765_3745134_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	6.5e-56	88.5
WP_090121488.1\|3745130_3746498_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.6e-224	84.0
WP_090121487.1\|3747006_3747780_-	hypothetical protein	NA	NA	NA	NA
WP_090121484.1\|3748024_3749191_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	5.2e-200	92.8
WP_090121482.1\|3749243_3749804_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	4.0e-97	94.1
WP_139234402.1\|3749805_3751032_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	3.9e-222	91.2
WP_032979707.1\|3751028_3751367_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.2e-49	85.7
WP_032979710.1\|3751363_3751657_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	2.9e-43	82.5
WP_090121480.1\|3751656_3752100_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	1.4e-76	89.8
WP_167518552.1\|3752092_3752245_+	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	7.8e-16	80.0
WP_000113647.1\|3752375_3752732_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
3755991:3756038	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4335215 : 4399964

Escherichia_phage(24.32%)

holin,transposase,plate,tail,integrase,tRNA

attL 4358813:4358828|attR 4400958:4400973

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_090126389.1\|4335215_4336454_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_090126392.1\|4336840_4338082_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	6.3e-103	47.3
WP_007370697.1\|4338864_4339347_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
WP_090126535.1\|4339466_4339943_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_090126395.1\|4339932_4340226_+	RnfH family protein	NA	NA	NA	NA
WP_090126397.1\|4340294_4340636_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_090126400.1\|4340783_4342445_-	DNA repair protein RecN	NA	NA	NA	NA
WP_074773957.1\|4342531_4343422_-	NAD(+) kinase	NA	NA	NA	NA
WP_139234457.1\|4343544_4344141_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_090126406.1\|4344183_4345470_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_090126409.1\|4345488_4346277_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_090126412.1\|4346444_4347806_+	signal recognition particle protein	NA	NA	NA	NA
WP_090126415.1\|4348057_4348306_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_090126418.1\|4348324_4348873_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_090126421.1\|4348903_4349671_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002914145.1\|4349714_4350062_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_090126423.1\|4350218_4350410_-	late control protein B	Q37973	Salmonella_virus	2.3e-20	70.3
WP_090126426.1\|4350489_4351650_-	hypothetical protein	S4TRX8	Salmonella_phage	1.3e-89	44.5
WP_090126429.1\|4351646_4352108_-\|tail	phage tail protein	U5N3F6	Enterobacteria_phage	1.0e-45	59.5
WP_090126432.1\|4352110_4354015_-\|tail	phage tail tape measure protein	A0A0M3UL85	Salmonella_phage	1.9e-29	37.4
WP_061493592.1\|4354007_4354127_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	7.5e-14	87.2
WP_090126435.1\|4354159_4354441_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	3.6e-30	79.5
WP_007370716.1\|4354503_4355022_-\|tail	phage major tail tube protein	Q858V0	Yersinia_virus	4.5e-87	90.1
WP_074773984.1\|4355034_4356216_-\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	8.1e-201	88.0
WP_090126439.1\|4356346_4356940_-\|tail	phage tail protein	M1SV83	Escherichia_phage	3.0e-42	49.2
WP_090126442.1\|4356939_4358088_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.3e-113	47.5
WP_090126445.1\|4358304_4359255_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	1.2e-80	81.7
4358813:4358828	attL	NA	NA	NA	NA
WP_090126448.1\|4359409_4360018_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	3.8e-85	75.5
WP_090126451.1\|4360010_4360919_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	2.4e-128	77.5
WP_090126454.1\|4360923_4361271_-\|plate	baseplate assembly protein	A0A0F7LDQ1	Escherichia_phage	4.3e-41	73.0
WP_090126457.1\|4361267_4361903_-\|plate	phage baseplate assembly protein V	A0A0F7LDY9	Escherichia_phage	1.4e-93	81.5
WP_090126460.1\|4361990_4362458_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	1.8e-47	58.2
WP_090126462.1\|4362553_4362979_-	protein lysB	A0A218M4K2	Erwinia_phage	2.5e-27	54.7
WP_090126465.1\|4362975_4363485_-	lysozyme	A0A218M4K3	Erwinia_phage	5.6e-66	75.0
WP_035888412.1\|4363468_4363690_-\|holin	holin	A0A218M4L5	Erwinia_phage	2.9e-11	43.8
WP_090126467.1\|4363680_4363884_-\|tail	tail protein X	A0A0M3ULF4	Salmonella_phage	4.5e-19	65.2
WP_090126470.1\|4364081_4364267_-	hypothetical protein	A0A0M5M1G5	Salmonella_phage	3.5e-10	55.7
WP_090126473.1\|4364341_4366312_-	replication endonuclease	A0A218M4H2	Erwinia_phage	1.5e-263	71.5
WP_090126475.1\|4366312_4366534_-	hypothetical protein	Q6K1F5	Salmonella_virus	1.0e-19	66.2
WP_090126478.1\|4366533_4366761_-	DUF2732 family protein	A0A0M3UL87	Salmonella_phage	4.2e-05	43.5
WP_090126481.1\|4366829_4367168_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	1.2e-37	68.5
WP_090126484.1\|4367206_4367584_-	Cro/Cl family transcriptional regulator	A0A0M4R4X7	Salmonella_phage	2.1e-41	70.0
WP_090126538.1\|4367699_4368548_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	2.1e-94	62.6
WP_090126488.1\|4368554_4369604_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	1.9e-153	73.9
WP_090126491.1\|4369765_4370197_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_090126494.1\|4370261_4371626_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_090126497.1\|4371806_4372877_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.4e-90	51.2
WP_090126500.1\|4372886_4374008_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_090126503.1\|4374074_4374947_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_090126506.1\|4374943_4376104_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_090126509.1\|4376351_4376693_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_090126512.1\|4376958_4377696_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_090126515.1\|4377827_4378808_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_090126518.1\|4378804_4379536_+	polyphenol oxidase	NA	NA	NA	NA
WP_090126522.1\|4379665_4382239_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	5.5e-125	35.0
WP_090124424.1\|4387959_4389258_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.7
WP_074778660.1\|4389254_4389578_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_090124428.1\|4389622_4390978_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_090124430.1\|4391091_4393752_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_090124432.1\|4393784_4394483_-	DTW domain-containing protein	NA	NA	NA	NA
WP_090124435.1\|4394552_4394972_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	2.0e-13	41.5
WP_090124438.1\|4395178_4396276_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_090124441.1\|4396326_4397016_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	47.9
WP_090124446.1\|4397329_4397713_+	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	3.1e-32	71.8
WP_090124449.1\|4397762_4399097_-	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.1e-41	30.1
WP_090124452.1\|4399226_4399964_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
4400958:4400973	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4839668 : 4848054

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_090123123.1\|4839668_4840616_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	6.2e-10	26.7
WP_090123125.1\|4840599_4841337_+	ABC transporter permease	NA	NA	NA	NA
WP_090123127.1\|4841311_4841425_-	protein YohO	NA	NA	NA	NA
WP_090123128.1\|4841483_4842215_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.4e-81	73.4
WP_090123836.1\|4842435_4844124_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.7e-258	84.7
WP_090123130.1\|4844117_4844837_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_090123132.1\|4844889_4845366_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.2e-64	79.5
WP_090123134.1\|4845495_4845951_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-29	44.9
WP_090123838.1\|4846020_4848054_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.8e-54	27.9

DBSCAN-SWA_6

4922506 : 4928858

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_090123247.1\|4922506_4923922_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	1.4e-18	31.2
WP_090123249.1\|4924108_4925002_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	7.4e-45	41.2
WP_090123251.1\|4925401_4926484_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.6e-102	54.2
WP_090123253.1\|4926486_4927386_+	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	2.2e-28	33.8
WP_090123255.1\|4927433_4928312_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.3e-105	63.8
WP_090123257.1\|4928315_4928858_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.7e-50	56.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage