CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045324	Marinobacter sp. THAF197a chromosome, complete genome	2 crisprs	WYL,DEDDh,cas3,RT,DinG,csa3	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045324_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045324_1

1845199-1845296

Orphan

Consensus_repeat	Method
CAACGGGCAAAAGTGGGTCAGACCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045324_1

>merge|NZ_CP045324|1|1845199-1845296|CRISPRCasFinder
CAACGGGCAAAAGTGGGTCAGACCCCATTCGGGGTCAGACCCGATAGACTCAATGGGTTCTAGCCCCCGCATCAACGGGCAAAAGTGGGTCAGTCCCC

>NZ_CP045324|1|1|1845199-1845296|CRISPRCasFinder
CAACGGGCAAAAGTGGGTCAGACCCC	ATTCGGGGTCAGACCCGATAGACTCAATGGGTTCTAGCCCCCGCAT
CAACGGGCAAAAGTGGGTCAGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045324.1\|WP_058089623.1\|1843360_1844041_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP045324.1\|WP_152438014.1\|1853077_1853722_+\|polysaccharide-biosynthesis/export-family-protein	unknown	unknown	gnl\|CDD\|132072
NZ_CP045324.1\|WP_061331053.1\|1840888_1841725_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP045324.1\|WP_152438010.1\|1846486_1849111_+\|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD	unknown	unknown	gnl\|CDD\|236445
NZ_CP045324.1\|WP_152438011.1\|1849107_1850286_+\|2-methylaconitate-cis-trans-isomerase-PrpF	unknown	unknown	gnl\|CDD\|131387
NZ_CP045324.1\|WP_152438005.1\|1836576_1838508_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
NZ_CP045324.1\|WP_152438006.1\|1839467_1840334_-\|dihydrofolate-reductase-family-protein	unknown	unknown	gnl\|CDD\|224896
NZ_CP045324.1\|WP_152439625.1\|1838507_1839467_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP045324.1\|WP_152438004.1\|1836191_1836590_+\|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl\|CDD\|376501
NZ_CP045324.1\|WP_152439626.1\|1856196_1857462_+\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|274391
NZ_CP045324.1\|WP_058089618.1\|1840453_1840870_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378971
NZ_CP045324.1\|WP_061331172.1\|1855520_1856180_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|274392
NZ_CP045324.1\|WP_152438012.1\|1850492_1851428_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|377877
NZ_CP045324.1\|WP_152438003.1\|1835198_1836182_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|176217
NZ_CP045324.1\|WP_152438016.1\|1857473_1857869_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP045324.1\|WP_152438007.1\|1842042_1843251_+\|hemin-binding-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP045324.1\|WP_152438008.1\|1844059_1844947_+\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|183086
NZ_CP045324.1\|WP_152438013.1\|1851600_1853013_+\|TIGR03013-family-PEP-CTERM/XrtA-system-glycosyltransferase	unknown	unknown	gnl\|CDD\|274390
NZ_CP045324.1\|WP_152438009.1\|1845347_1846481_+\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
NZ_CP045324.1\|WP_152438015.1\|1853763_1855281_+\|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|274386

Protein	Function_ID	Function_description	E-value
NZ_CP045324.1\|WP_058089623.1\|1843360_1844041_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	3.70361e-46
NZ_CP045324.1\|WP_152438014.1\|1853077_1853722_+\|polysaccharide-biosynthesis/export-family-protein	gnl\|CDD\|132072	TIGR03027, pepcterm_export, putative polysaccharide export protein, PEP-CTERM sytem-associated. This protein family belongs to the larger set of polysaccharide biosynthesis/export proteins described by pfam02563. Members of this family are variable in either containing of lacking a 78-residue insert, but appear to fall within a single clade, nevertheless, where the regions in which the gene is found encode components of the PEP-CTERM/EpsH proposed exosortase protein sorting system. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.42416e-67
NZ_CP045324.1\|WP_061331053.1\|1840888_1841725_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	1.59048e-154
NZ_CP045324.1\|WP_152438010.1\|1846486_1849111_+\|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP045324.1\|WP_152438011.1\|1849107_1850286_+\|2-methylaconitate-cis-trans-isomerase-PrpF	gnl\|CDD\|131387	TIGR02334, conserved_hypothetical_protein, probable AcnD-accessory protein PrpF. The 2-methylcitrate cycle is one of at least five degradation pathways for propionate via propionyl-CoA. Degradation of propionate toward pyruvate consumes oxaloacetate and releases succinate. Oxidation of succinate back into oxaloacetate by the TCA cycle makes the 2-methylcitrate pathway a cycle. This family consists of PrpF, an incompletely characterized protein that appears to be an essential accessory protein for the Fe/S-dependent 2-methylisocitrate dehydratase AcnD (TIGR02333). This protein is related to but distinct from FldA (part of pfam04303), a putative fluorene degradation protein of Sphingomonas sp. LB126. [Energy metabolism, Fermentation].	0
NZ_CP045324.1\|WP_152438005.1\|1836576_1838508_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.26109e-36
NZ_CP045324.1\|WP_152438006.1\|1839467_1840334_-\|dihydrofolate-reductase-family-protein	gnl\|CDD\|224896	COG1985, RibD, Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism].	8.41038e-47
NZ_CP045324.1\|WP_152439625.1\|1838507_1839467_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	2.21026e-20
NZ_CP045324.1\|WP_152438004.1\|1836191_1836590_+\|6-carboxytetrahydropterin-synthase	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	1.80065e-24
NZ_CP045324.1\|WP_152439626.1\|1856196_1857462_+\|outer-membrane-beta-barrel-protein	gnl\|CDD\|274391	TIGR03016, hypothetical_protein, uncharacterized protein, PEP-CTERM system associated. Members of this protein family are found predominantly in exopolysaccharide biosynthesis operons marked by the presence of the EpsH-family putative exosortase and presence in the genome of the PEP-CTERM protein sorting signal. Members of this family may be distantly related to the EpsL family modeled in TIGR03014.	2.93958e-13
NZ_CP045324.1\|WP_058089618.1\|1840453_1840870_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378971	pfam12844, HTH_19, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains.	8.78576e-06
NZ_CP045324.1\|WP_061331172.1\|1855520_1856180_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|274392	TIGR03018, pepcterm_TyrKin, exopolysaccharide/PEP-CTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.	9.15985e-73
NZ_CP045324.1\|WP_152438012.1\|1850492_1851428_+\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|377877	pfam07589, VPEP, PEP-CTERM motif. This motif has been identified in a wide range of bacteria at their C-terminus. It has been suggested that this is a protein sorting signal. Based on phylogenetic profiling it has been suggested that the EpsH family of proteins mediate this function.	5.56795e-07
NZ_CP045324.1\|WP_152438003.1\|1835198_1836182_+\|dehydrogenase	gnl\|CDD\|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	9.52266e-88
NZ_CP045324.1\|WP_152438016.1\|1857473_1857869_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	2.65219e-18
NZ_CP045324.1\|WP_152438007.1\|1842042_1843251_+\|hemin-binding-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	3.77621e-06
NZ_CP045324.1\|WP_152438008.1\|1844059_1844947_+\|methylisocitrate-lyase	gnl\|CDD\|183086	PRK11320, prpB, 2-methylisocitrate lyase; Provisional.	0
NZ_CP045324.1\|WP_152438013.1\|1851600_1853013_+\|TIGR03013-family-PEP-CTERM/XrtA-system-glycosyltransferase	gnl\|CDD\|274390	TIGR03013, EpsB_2, sugar transferase, PEP-CTERM system associated. Members of this protein family belong to the family of bacterial sugar transferases (pfam02397). Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria (notable exceptions appear to include Magnetococcus sp. MC-1 and Myxococcus xanthus DK 1622 ). These genes are generally found near one or more of the PrsK, PrsR or PrsT genes that have been related to the PEP-CTERM system by phylogenetic profiling methods. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species. These proteins are homologs of the EpsB protein found in Methylobacillus sp. strain 12S, which is also associated with a PEP-CTERM system, but of a distinct type. A name which appears attached to a number of genes (by transitive annotation) in this family is "undecaprenyl-phosphate galactose phosphotransferase", which comes from relatively distant characterized enterobacterial homologs, and is considerably more specific than warranted from the currently available evidence.	0
NZ_CP045324.1\|WP_152438009.1\|1845347_1846481_+\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
NZ_CP045324.1\|WP_152438015.1\|1853763_1855281_+\|lipopolysaccharide-biosynthesis-protein	gnl\|CDD\|274386	TIGR03007, pepcterm_ChnLen, polysaccharide chain length determinant protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide chain length determinant proteins (pfam02706). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	4.42866e-113

>NZ_CP045324.1|WP_152438008.1|1844059_1844947_+|methylisocitrate-lyase
MANQLSPGARFRKALKENQPLQIVGTINAYTAMMAERVGHQAIYLSGGGVANASYGLPDLGMTTMNDVVEDVRRITAATEVPLLVDIDTGWGGAFNIGRTIREMERAGAAAVHIEDQVAQKRCGHRPNKEIVSKEEMVDRIKAAADARQDKDFFIMARTDAFQKEGLEAAIDRAKACIEAGADGIFAEAVHELSDYKAFAEAIDAPILANITEFGATPLYNRSELADAGAAMVLYPLSAFRAMNKAALAVYQNILEKGDQKDVVDLMQTRMELYDFLNYHDFEQKLDQLFAQKKD
>NZ_CP045324.1|WP_058089623.1|1843360_1844041_+|GntR-family-transcriptional-regulator
MVQAPAQVHTRADEAFDCLQTAIVMGDLAPGEKIGEVELCSRFNLTRGPLREALGRLESRGLLVRRPHAGVKVVSVSAEELLELYRIREVMEGLAARQAAERMTDEEIRDLKATLDSHEKMIEEAQGQAYYQAEGDYDFHHRIATGSRNTKLAQMLLGDLYYMVRMYRYRLSTSAGRPHMALGEHRRIVEAIAQRDGELAEFLMKRHINAARQNIEQKIQQGVLTI
>NZ_CP045324.1|WP_152438007.1|1842042_1843251_+|hemin-binding-protein
MAHPLVAKRHGPQRSFIALFSCALAVFSVQGVASELSLSEQNALSTQEALFAQDRLKATREHWLRSKFEFSGRTNDDSDRLDGTLNLGLKNMFGESHRADLRYADSKTYRVSNERKVLGFGYGLPVGRNQLRMELTNTAYDEVSRVEGARYQKAGRIRDVAVTGSRPLFSVSGYSIRGRAGYNSVTRSWTRQSDENHRNHYEVSTLGFEALGRHDLVGGFSLSSGFRAVTGIETEAERTAVGYQDSQDDQFGRMLFTASLDREMLDWQWDLEGQYQIASADIPGSHRLQVAGAALSTGYSGQSLSVAEGGWLRLGSRSPTFNVPFFPQMLSSVRLSVLRGWVPDASFQQDQSGHVTSGELSLGLSARKFSADVSVGRVLGTTTEAIVVPDHPDVRLSMSLQI
>NZ_CP045324.1|WP_061331053.1|1840888_1841725_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MIKKCLFPVAGYGTRFLPATKAMPKEILPIVNKPLVQYGVEEAAEAGIHEFGFVTGRGKRAIEDHFDISYELEHQIAGTGKEGLLTSIRDLITNNTFAFTRQNEMKGLGHAILTGRNLVGDNPFAVVLADDFCVGPEGEDGVLAQMVKLYNQFRCSIVAIEEVPQDETHKYGVIAGESMKDGLYRITDMVEKPAPEDAPSNLAIIGRYILTPDIFDIIERTPPGKNGEVQITDALLEQAKNGCVLAYQFKGQRFDCGSIDGFVEATNYVYENIYKKGK
>NZ_CP045324.1|WP_058089618.1|1840453_1840870_+|helix-turn-helix-transcriptional-regulator
MRYLQSFHRRLRQLRQTGQLSLADVANMCGVDEARVGSWEATDPKQRSYPGVSELLDVCLKTETPLDQLLDMDDGGDSGQLELPGLAFSNSDDLSVALKELERELNRLQLSEEELELLRRFRKATAENRRMVLQLLGR
>NZ_CP045324.1|WP_152438006.1|1839467_1840334_-|dihydrofolate-reductase-family-protein
MATLDTDTAWKLILNASNRSNVTLPLPGTSQPALRINGKSWELVHQATEDARNLISLFLPLCQPIKRPAGNHVIGQLGQSLDGRIATVTGCSRFINGDDGITHLHRIRALCDAVVVGAGTAATDNPRLTVRRANGPNPVRVVIDRHNRVPRSHHLFTDNAAPTLHLIAGEYDSTRKPASIGQVTTIPCLGAEDDPTPVPPERILQVLQDHGLRKIFIEGGGVTVSSFLKAGLLDRLHVMVAPMIIGSGRPAFSLPEIDQLDDALRPRAQLVNLGSDMLFDLAFERRWN
>NZ_CP045324.1|WP_152439625.1|1838507_1839467_+|flippase-like-domain-containing-protein
MRQRPWPKLLLRWAATLIILVLVLRFVDLSGLIARLRSISPSLIALALAVSVLQVVLSAWRWRYTAGRLGVSVPMNFAVREYYLATFLNQVLPGGVMGDVNRAWRHSRAHGQGTVERSGQLSAVHAVVLERLSGQLVLFPVVLLAVVVLWSVGAFSSQPLPISISLNPAYWLLPPLLVGIGIWLLWVSGRLASLRRYLGRLGADLKRAFAGWRNGSVQLFTSLAVLGTYLTVFVLLAFGMGLAADASSLFLTAALCLLLLLAMVVPITVSGWGVREGAAALLWPAVGLPAEQGVAISIGYGALIFLASWPGALVLLKRA
>NZ_CP045324.1|WP_152438005.1|1836576_1838508_+|glycosyltransferase
MPASDLWFVVPGDPDQNTGGYRYVQRLVAASRQAGVSARVQGLAGCFPRPDQTATNAMQEFLTSLPDNTLVVLDGLAMGAMPDVLERHGTRLRLVALVHHPLADETGLSQEQQAWFREAERQSLAQVGRVVTTSEYTARRVQQDYGVPSWKVTTAQPAVDALFFQIERNHLDKPMRLLCVGHLSARKAQHQLVDALATLQELPWQCTLVGAEDRDPDYARAVRSTIARHGLADRIQLLGELSEPALEEAYHRADLFVFPSLYEGYGMVIDEALAAGLPVLSSDGGALALTTSKPGARNFPAGNVKVLASELRSLLTNTADFSELARRARAHRSDIRQWSDTTREFLGSLGFSEEGDPARFSGQWLEAREQADHTARSRALTDTLANWLTVEYNTKAAGKPAGDPLHLVDIGSGRGSNPGYLIPRLPVPQRWTLIEPDQHLLGLACHRVGALDAPAAPMMRELTPHNLDELLPDDATLVTASALIDLVSEHWLRAFSSAVVRRRAGVLVVISYSGHFELAPSHASDALVQELVNQHQHGDKGSGAALGPEATGVLERLLREAGYTVTVEQSQWHLSPGQGGTSAELITMLMTGWADAACQQNPAAQAEIRTWLADRQDQLARHELRVVVDHLDLLGLPDSGLPA
>NZ_CP045324.1|WP_152438004.1|1836191_1836590_+|6-carboxytetrahydropterin-synthase
MFSLTVRDHMMIAHSFKGEIFGPAQGLHGATYVVDVTFERHVLDDNDLIVDIGQASDLLKEVLSEFNMKNLDDLQEFEGRNTTTEFMAQVVFNRMAAAIHAGRLGEEGRQVAGLKVTLGESHLAWASYHAGI
>NZ_CP045324.1|WP_152438003.1|1835198_1836182_+|dehydrogenase
MTSSGNQAFWVTGPGQGELRPATLEWPESAGAEIVTVCTLYSGISRGTESLVFNNRVPQDEYLRMRAPFQEGQFPFPVKYGYANVGEVQDGPEHLMGKRVFCLYPHQRHYRVPASAVTALPDDLPPGRAILAANMETAINGLWDAEPAVGDRVAVVGLGVVGLLVAWLVKQIPGSQLLAVDTNESRADIAKALGLPFTTEASARDCDLVIHASGRSEGLSSALSMAGPEARIVELSWYGNEPVTVPLGHAFHPNRLELKSSQVGQIPPHRQPRWSYARRLELALQLLRAPELDNLISGESRFDDLPAVASTILSPAGDALCHRITYS
>NZ_CP045324.1|WP_152438009.1|1845347_1846481_+|2-methylcitrate-synthase
MAEAKKLSGAGLRGQVAGETALCTVGKTGTGLTYRGYDVTDLAANAQFEEVAYLLLRGKLPNQAELDAYKAKLKSLRNLPDALKLVLEQIPKNAHPMDVMRTGCSMLGNLETENDFSEQDDKIDRMLATFPAIITYWYRFAHEGVRIDTANSECDSIGGLFLELLHGKKPSELHERVMNVSLILYAEHEFNASTFTARVCASTLSDIHSCVTGAIGSLRGPLHGGANEAAMELIQRFQTPEEAEAGLMGMLERKEKIMGFGHAIYKESDPRNAIIKQWSEKLAKEVGDTVLYPVSVRCEEVMWREKKLFCNADFFHASAYHFMGIPTELFTPIFVMSRVSGWTAHVKEQRANNRIIRPSADYTGPEHQDWLPIEERS
>NZ_CP045324.1|WP_152438010.1|1846486_1849111_+|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD
MNTEFRKPLPGTDLEYYDTRQAVEAIQPGSYAKLPYTSKILAEQLVRRCDKESLTDSLKQLIERRRDLDFPWYPARVVCHDILGQTALVDLAGLRDAIAEKGGDPSKVNPVVQTQLIVDHSLAVEAPGFDPDAFEKNRAIEDRRNEDRFHFINWTRTAFKNVDVIPAGNGIMHQINLEKMSPVIQNRPDEDGHPIAFPDTCVGTDSHTPHIDALGVIAVGVGGLEAETVMLGRPSMMRLPDIVGVKLTGKRQPGITATDIVLAITEFLRKERVVGAYLEFFGEGASSLTIGDRATISNMTPEYGATAAMFYIDEQTTDYLKLTGREPEQVDLVEKYARETGLWASEMTEAQYERVLEFDLSTVVRNVAGPSNPHRRVATSDLHDRGIAVNLDKALEEEKKGLMPDGAVIIAAITSCTNTSNPRNVVAAGLLAKKANELGLVRKPWVKSSFAPGSKVARLYLEEAGLLPELEKLGFGIVAYACTTCNGMSGALDPKIQQEIIDRDLYSTAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTVRFDIERDALGYSKDGKPVTLKDLWPSDEEIDRIVGEFVKPEQFKQVYIPMFNLDAAEQAKSPLYEWRPQSTYIRRPPYWEGTMAAERELKGMRPLAILPDNITTDHLSPSNAIMMDSAAGEYLHKMGLPEEDFNSYATHRGDHLTAQRATLANPKLFNEMVRDENGEVVQGSLARVEPEGKTMRMWEAIETYMERKQPLIIVAGADYGQGSSRDWAAKGVALAGVEAIVAEGFERIHRTNLIGMGVMPLQFEEGTTRHTLQLDGTETYDVEGKAAPGAKLELVIHRKTGEVDRVPVICRLDTAEEVTVYTAGGVLQRFAQDFLASEGAA
>NZ_CP045324.1|WP_152438011.1|1849107_1850286_+|2-methylaconitate-cis-trans-isomerase-PrpF
MSFPQQIKVPATYMRGGTSKGVFFRLQDLPEPCQVPGEARDKLLLRVIGSPDPYEKQIDGLGNATSSTSKTVILAAPTQPDHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAINGGFVAKDRIPDNGICTVRIWQANIQKTIVAHVPITNGEVQETGDFELDGVTFPAAEVKIEFMDPADGEGAMFPTGNLVDDLDVPGVGTLKATMINAGIPTIFINAEDIGYKGTELQNDINSNPKALAMFETIRAHGAVKMGLIKDVAEAANRQHTPKVAFVAKPVDYVSSSGKQINAADIDVLVRALSMGKLHHAMMGTAAVAIATASAIPGTLVNLAAGGGDRTEVTFGHPSGTLGVGAEAKEVNGQWTATKAIMSRSARIIMEGWVRVPGDCF
>NZ_CP045324.1|WP_152438012.1|1850492_1851428_+|PEP-CTERM-sorting-domain-containing-protein
MNRIPESFKKPALLAGCAALTLAFSATSMAAPIIMEGDYVRTAISDNGTLGYGGTTSPGLLHDPSGTRSWGAEDYLTPGSPWEMFGVKADQFGNVHNNNEWPSNIGSTSLTDISGGSAFDNHVLWSGTYGGMFNITHEYIFNDNYERIDILTSIEALTDLTGLKFLRAIDPDPDVNTYGSFDTINTRGGAGIAEEDFVNSQGAQTGLTLGLYTNSSIEHNTGITSSWSNDPDAYLAGQNDGNGDNVIGLAFNIGNLFQGDLVKLSYSYVMGETLDNVDIPDEPVASVPEPGTLGLLGLGLAGLLGVRRRNK
>NZ_CP045324.1|WP_152438013.1|1851600_1853013_+|TIGR03013-family-PEP-CTERM/XrtA-system-glycosyltransferase
MAHVRLFRHYIHLPFVILGLIDLVVMGFAFGLAVFFRFFGEVGFFLEHLYFVLPSIITFALFNLLVMIALGVHQSRVEEGMSGMMLRTIMAMILAIPVHGFAYFIADDWLWYLGSFGLLTSATVLAIFSLGIVRVLFFALVGKEAFKRRVLVLGAGHRARQLLEDLTTPFNRKGFTLDGFVPLPDEPIEVGDQHLINLPTSLHDYVLRHPVREIVVAVDDRRRGLPMEDLLECKMEGVSIIDGANFYERESRKVALEMISHGWLVFSDGFSVSSVYGAGKRTLDILAAGTLLLATFPIMILTALAIKLEDGFKAPVIYSQERVGLNNKVFKVHKFRSMITDAEKDGAVWAKKNDTRVTRVGEFIRKVRIDELPQIFNVLNGTMAFVGPRPERPVFVAQLSEKIPFYSERHRVKPGLTGWAQLCFAYADNEEDTREKLRYDLYYIKNQSLLLDLLVIIQTVEVVLFKKGSR
>NZ_CP045324.1|WP_152438014.1|1853077_1853722_+|polysaccharide-biosynthesis/export-family-protein
MSRKYLTQGLFVSFMAVALATGCAGPSASSPDKIQRALALDTRDSVDQYILGATDVVRVSVWRNEDLSISVPVRPDGKISVPLVGDVQASGRTPEELASSIRASLAEYIREPQVSVVVTSMGSHEFTDRVRVTGAVRQPVSIPHRSGMTVLDMFLNAGGANEFAALNRSMLYRKVGNEVVAIPVKLDDILSKGQVETNYSMRPGDILTIPERSF
>NZ_CP045324.1|WP_152438015.1|1853763_1855281_+|lipopolysaccharide-biosynthesis-protein
MALPLSQLPQEIIREVRQRKGLAFLLFVVVSFAVLGAGFIWPYKYQADTIIFVDDRNIIAPLMEGRAVTTKINDRTSAARELLMSRTLIERVASDPEIYRNASMDPDALEGRIAKIRSGLSVRPRGDSYFSIGFSSTSQMEAFRVAQKLGQVFIEETKDRKRSESRNAYDFIDKQVKSYEQQLTQAENRLKQFLSENTDGTEQEANSRMAQLRNQLELAQLEKEELRTRIASLQGQLNNIRPTIRQGRTEDAFRERIRTLEERLDALRLQYHDTYPDIVITQEQLAELKRQRDLAAAQQGGTTSLDGEEAVNPLYQELSAALSKTRADMATIDTRINSLQRLMEQQTQRMERIQANKAQYSELTRDMEVNREIYDDLLKRREKARVSMHLDIEGQGLNYRINEAAQFPRTPSGPQFSMFAMAGLFLGLAAPFGAVAGLLQVDPRIRARKQLEDGIGLPVLIEIPEVRTPFEKRRDRRVTMMVGIFVVLTAAVYITIVVLAQLGVI
>NZ_CP045324.1|WP_061331172.1|1855520_1856180_+|polysaccharide-biosynthesis-protein
MQEPRRLTPDDLDERRIIYPESRNRTLVNRFRDLRTKLLELSGGNNFTLVVSGASSGAGSSFVALNLAAAFAFDQAKTALIIDCNLREPSLHTTLDVLPETGLTDFLDDPDYDIARILYPTGIPRLRLIPAGSRRETPSEFFTSFRMKQFLQAVRRRYPDRFIVLDTAPISESPDARILTELCDYAMLVVPHGKITATTAEHAATAFNPDKFVGAVING
>NZ_CP045324.1|WP_152439626.1|1856196_1857462_+|outer-membrane-beta-barrel-protein
MPHSRILAIGFLLVCSGAATTAQGNSEVTGGLDTRFTDNARKTSSGETSDMETRAYIRAGYRTDPGRCNADFTGTLGYSLWHDNSFDDEAFGEMDFIGDCELANRFYWDVSNNLREVNQDAAQSNTPDNRTRKNVFSTGPRYLLRVNDTNWLNLSARYENVEFSEPEESDSERYIGSVAWNHIVSQTLTAGVSTSYSRTEYDTDAEVDVKSARLTFSNVWATTRLSGAIGVSEIETRFGSTTQSSDGLIGELDLTRTITPSLDWYLRGARELTDRTSSFDIRFGEFEFNLRDSISVETTTLSTGINQRYSDRSSLTVDVYASQADYLESPEREDKSGLNARYSRPLTELASGYASIGYDYTKFQSDQADDRTLRLEAGTEYQATRDFNLVAKVGHERKVSDVPTREYDENWVLVGVEYRFR
>NZ_CP045324.1|WP_152438016.1|1857473_1857869_+|GtrA-family-protein
MLTNAEGIVNKLAAYGLAGIVGTLFHYLTLYIFVEFAGVGVLSATGIGFVVGAVINHELNRRYVFRGAGGRYAETAVRFFAIAVLGFCMNMLAMHLLHSLMHVYYLLAQLIATAGVFLVTFVLNKSWTFRT

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Crispr_ID: NZ_CP045324_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045324_2

2702016-2702135

Orphan

Consensus_repeat	Method
TCCAACCACGAGTGGGATTGGGTAAAAGTGGGTCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045324_2

>merge|NZ_CP045324|2|2702016-2702135|CRISPRCasFinder
TCCAACCACGAGTGGGATTGGGTAAAAGTGGGTCAGTCCCCGTTCGGGGACAGACCCTTAGGGACAGCCCTTGGGAGTCCCTAGTCCAACCACGAGTGGGATTGTGTAAAAGTGGGTCAG

>NZ_CP045324|2|2|2702016-2702135|CRISPRCasFinder
TCCAACCACGAGTGGGATTGGGTAAAAGTGGGTCAG	TCCCCGTTCGGGGACAGACCCTTAGGGACAGCCCTTGGGAGTCCCTAG
TCCAACCACGAGTGGGATTGTGTAAAAGTGGGTCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045324.1\|WP_152438554.1\|2704655_2705420_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366132
NZ_CP045324.1\|WP_061333619.1\|2703368_2704580_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP045324.1\|WP_152438550.1\|2697043_2698498_+\|YdiU-family-protein	unknown	unknown	gnl\|CDD\|234583
NZ_CP045324.1\|WP_152438552.1\|2700064_2700547_-\|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl\|CDD\|180061
NZ_CP045324.1\|WP_152438555.1\|2705440_2705839_-\|flagellar-export-chaperone-FliS	unknown	unknown	gnl\|CDD\|235560
NZ_CP045324.1\|WP_152438548.1\|2694894_2696118_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|237556
NZ_CP045324.1\|WP_152438545.1\|2690617_2690941_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045324.1\|WP_061333890.1\|2713317_2713557_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|226603
NZ_CP045324.1\|WP_152438549.1\|2696131_2696935_-\|HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|234684
NZ_CP045324.1\|WP_152438551.1\|2698657_2700043_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341039
NZ_CP045324.1\|WP_152438546.1\|2690953_2692975_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045324.1\|WP_152438557.1\|2708066_2708501_-\|flagellar-protein-FlaG	unknown	unknown	gnl\|CDD\|377090
NZ_CP045324.1\|WP_058092390.1\|2700684_2701656_+\|response-regulator	unknown	unknown	gnl\|CDD\|226229
NZ_CP045324.1\|WP_152438559.1\|2710233_2710923_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045324.1\|WP_152438560.1\|2710959_2711283_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP045324.1\|WP_152438558.1\|2708572_2710051_-\|flagellin	unknown	unknown	gnl\|CDD\|236140
NZ_CP045324.1\|WP_152438561.1\|2711641_2713114_+\|flagellin	unknown	unknown	gnl\|CDD\|183761
NZ_CP045324.1\|WP_152438556.1\|2705905_2707873_-\|flagellar-filament-capping-protein-FliD	unknown	unknown	gnl\|CDD\|236141
NZ_CP045324.1\|WP_152438544.1\|2688961_2690587_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405
NZ_CP045324.1\|WP_152438547.1\|2693173_2694898_-\|alpha-amylase	unknown	unknown	gnl\|CDD\|200493

Protein	Function_ID	Function_description	E-value
NZ_CP045324.1\|WP_152438554.1\|2704655_2705420_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	1.9874e-15
NZ_CP045324.1\|WP_061333619.1\|2703368_2704580_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP045324.1\|WP_152438550.1\|2697043_2698498_+\|YdiU-family-protein	gnl\|CDD\|234583	PRK00029, PRK00029, YdiU family protein.	0
NZ_CP045324.1\|WP_152438552.1\|2700064_2700547_-\|YajQ-family-cyclic-di-GMP-binding-protein	gnl\|CDD\|180061	PRK05412, PRK05412, putative nucleotide-binding protein; Reviewed.	1.55815e-88
NZ_CP045324.1\|WP_152438555.1\|2705440_2705839_-\|flagellar-export-chaperone-FliS	gnl\|CDD\|235560	PRK05685, fliS, flagellar export chaperone FliS.	5.77018e-51
NZ_CP045324.1\|WP_152438548.1\|2694894_2696118_-\|glycosyl-transferase	gnl\|CDD\|237556	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional.	4.57682e-12
NZ_CP045324.1\|WP_152438561.1\|2711641_2713114_+\|flagellin	gnl\|CDD\|183761	PRK12806, PRK12806, flagellin; Provisional.	1.40098e-86
NZ_CP045324.1\|WP_061333890.1\|2713317_2713557_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	1.11502e-12
NZ_CP045324.1\|WP_152438549.1\|2696131_2696935_-\|HAD-IIB-family-hydrolase	gnl\|CDD\|234684	PRK00192, PRK00192, mannosyl-3-phosphoglycerate phosphatase; Reviewed.	6.67803e-98
NZ_CP045324.1\|WP_152438551.1\|2698657_2700043_+\|MFS-transporter	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.00329e-123
NZ_CP045324.1\|WP_152438557.1\|2708066_2708501_-\|flagellar-protein-FlaG	gnl\|CDD\|377090	pfam03646, FlaG, FlaG protein. Although important for flagella the exact function of this protein is unknown.	5.86929e-21
NZ_CP045324.1\|WP_058092390.1\|2700684_2701656_+\|response-regulator	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	5.29748e-38
NZ_CP045324.1\|WP_152438560.1\|2710959_2711283_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	4.95325e-17
NZ_CP045324.1\|WP_152438558.1\|2708572_2710051_-\|flagellin	gnl\|CDD\|236140	PRK08026, PRK08026, FliC/FljB family flagellin.	1.94811e-88
NZ_CP045324.1\|WP_152438556.1\|2705905_2707873_-\|flagellar-filament-capping-protein-FliD	gnl\|CDD\|236141	PRK08032, fliD, flagellar capping protein; Reviewed.	1.4445e-64
NZ_CP045324.1\|WP_152438544.1\|2688961_2690587_-\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	6.16115e-15
NZ_CP045324.1\|WP_152438547.1\|2693173_2694898_-\|alpha-amylase	gnl\|CDD\|200493	cd11356, AmyAc_Sucrose_phosphorylase-like_1, Alpha amylase catalytic domain found in sucrose phosphorylase-like proteins (also called sucrose glucosyltransferase, disaccharide glucosyltransferase, and sucrose-phosphate alpha-D glucosyltransferase). Sucrose phosphorylase is a bacterial enzyme that catalyzes the phosphorolysis of sucrose to yield glucose-1-phosphate and fructose. These enzymes do not have the conserved calcium ion present in other alpha amylase family enzymes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP045324.1|WP_058092390.1|2700684_2701656_+|response-regulator
MPNLDLPILVVDDAKFSSMVVGRTLRNAGYRDIRIANNAPDALKLMEQRQVSVLIADWLMPEMDGLQLTDHVRQQDEQDNHYTYVILLTARESVEALSEAFDRGVDDFIYKSDMTKQLIPRIFAADRMADRQNTLLRANALLVENNRELESTNIIDLETGLCNSKYARQRLQKTLRHAESRGGSTSYVMCGIRNWQDLKRKHPPSVMSELATGIARRLSTLIRPIDALCRVGDNQFAIVSYFPNSDHCSTTAFRRIFDGINHKALKTTAGFISVEAGMVLCRADAQDGTPSVQDMERAAVQGLVDAYETRRFTETKPEIREGV
>NZ_CP045324.1|WP_152438552.1|2700064_2700547_-|YajQ-family-cyclic-di-GMP-binding-protein
MPSFDIVSEIEMHEVTNAVDQAKRDLGNRWDFKNVQADIELEDKRITVSAEQEFQLEQLIDLLRMAFAKRNIDTRALAEDGESKAGKLVKQHFSLKQGIETDMAKKIVKMIKDQKMKVQASIQGDKVRVTGKKRDDLQEVIAMLREAELDIPLQFNNFRD
>NZ_CP045324.1|WP_152438551.1|2698657_2700043_+|MFS-transporter
MPQSFILKFLQGFQVYRNPRVIGMLFLGFSAGLPLLLVGGTFTAWLRDLGVELATIGFLSWVGMAHSIKVLWAPIVDRTSIPFLTRWLGWRRSWMLVSQISIAGALLGMALTDPTQQQWLVALWAVVAAFGSATQDISVDAYRVEAAEPHEQGGMAASYVTGYRVAMLMASAGALHIAAVGSWSLAYGTMALLMGVGMVTTLISTEPKHRQSAAVFAMEARVIGYLDRTKHSGARKNITAWLIGAFVCPFADFFQRYGKAALVILLFIATFRISDIFMGVMANPFYLDLGFTKSQIANIAAAFGLIMTLSGAAVGGALVARFGIARMLLFTAFMAPATNLTFAGLAIIGPQQPGLVAAIIADNVTGGMAISVFIAYLSSLTNTAYTATQYALFSSLMTLPGQFAAGFTGLLAEHVGWVGFFLITAGTGAPAIILAALLFRIAHPDKPARVEEETPPGQTAP
>NZ_CP045324.1|WP_152438550.1|2697043_2698498_+|YdiU-family-protein
MSTNAFKVEHRYLELPDSFYTRVKPTPLSQPAMVCFNHKLAEQMGFHVQDEAEWASVGAGAELLEGMDPVAMKYTGHQFGVYNPELGDGRGLLLWETVAPDGTRWDWHLKGAGTTPYSRFGDGRAVLRSTIREYLCSEAMHGLGIPTTRALFMISAKDPVRRESIETAAALMRVAQSHIRFGHFEFAAHHEGPEALKTLLEHVITLHFPHLISLPEEQRYQRWFEEVVERTARLIADWQAVGFCHGVMNSDNMSIIGDTFDYGPYAFLDDFDAGFICNHTDEGGRYAYNRQPQTGFVNCQYLANALLPILDEDHVRRGLRRYETTYNEHFKNNMRAKLGLEETDDSDMSLIMDTFSMLHEHRVDYTRFFRGISNLHRHGNAPVRDLFADRSVADEWLERYEARLQTETRAHDEREYAMRQVNPKYILRNYLAQQVIMEAQNGDCAPLKALLKVLEHPFDDQPEHEHYATLPPDWGKHLNISCSS
>NZ_CP045324.1|WP_152438549.1|2696131_2696935_-|HAD-IIB-family-hydrolase
MQPRLIVFTDLDGTLLDHDSYSWRAAKPAMARLGANGIPLIFNSSKTAAEIGELQNMMGLRAPFIAENGAAVVIPAGCLGNAEEEVVHVGRSYEEVVCTLLVQRKSGARFRSFDDLSAAEVAALTRLSVAEATRAKQRLATVPLLWDGTGEELAQFRAALELEGLRLVQGGRFWHAMGAFDKAEGARFLLKRYQEHYGEAPIVSIALGDSPNDQCMLEAADVPVVIRGVNSDQVQLPSSRHAVRSLKPGPEGWNECVLNLLFEYGYQ
>NZ_CP045324.1|WP_152438548.1|2694894_2696118_-|glycosyl-transferase
MGDFYQNGIITTLHNLVRRPVEDVEADLMSFRKARPMSLVLPSLYSELEGPALKNIVQELTKVPYLDEIVIGLDRADEAQYRHALEYFSELPQPFKVLWNDGPRLRALDMKLREQGLAPTEMGKGRNVWYCFGYVLASGVSKSVALHDCDILTYSRDLLARLIYPVANPGFNYMFCKGYYARVADGSMNGRVSRLLVTPLIRALKKVCGPNDFLDYLDSYRYPLAGEFSFRTDVINDLRIPSDWGLEIGVLSEMKRNYATNRLCQVDVADVYDHKHQELSPEDASRGLSKMSVDISKALFRKLATNGEIFSNEKFRTIKASYFRIALDFVETYQNDAIINGLSFDRHKEEKAVELFAQNVMRAGAYFLDNPMDTPFIPSWNRVTSAIPDIREQLLEAVELDNQEFRP
>NZ_CP045324.1|WP_152438547.1|2693173_2694898_-|alpha-amylase
MSQTLNSKLVAMLEVVYPAVDCAFVAEQLMDAMALAPDAEAPPAHQNHWDPSDIVLITYADTVQQPGEKPLVTLKRFLDDSLRDAISAVHILPFFPYSSDDGFSVMDYLAVNESHGGWEDIEAIAADYKLMADLVINHMSARSRWFENFRKRVGPGKDYFFEGNPKDDLSMVVRPRTSPLLTPVQTDDGERHVWCTFSEDQVDLNFANPEVLIEFARIIHYYLERGVRIFRLDAVAFLWKEPGTPCIHLQQTHELIKILRLLIEHHTPDAVVITETNVPNRENLTYFGNANEAHAIYNFSLPPLLINTLVTGNCRHLKTWLMSMPPAQMGTTYLNFIASHDGVGLRPTDGLLDEDEKQRLINTMESFGGKVSYRRTADGRDQPYEMNIALWDALKGTAEGGADHWQLQRFLCAHTIMLALEGIPAFYIHSLLATENDHARVEHTGRFRSINRGQWQLDTVEAALADPLSHHSKAFTELKRLIAIRRAQPAFHPNATQFTLHLGLQLFGFWRQSMRREQSIFCIHNISDEVQQVALTDINLIGTDQWTDLLSGMAIDDLAGVITLKPYQSVWLSN
>NZ_CP045324.1|WP_152438546.1|2690953_2692975_-|hypothetical-protein
MFWFTGDSLAFKPEPGDSRHFILEQTAELQTPSGFRREPTRVRMESLLRSDVLAVDNDVVELQSRSLHTQLWEQDRLGLDTEQIPEYSDRLQSMAALLKAGIVERVASDGQVLETNYVNDAALAELTEDSRLPEPVRDMLSRDLSVMHTYQPAFPSGKPRVGVSWQVPARDMGGQSLPAVQYEISHVNDDTVSLKFRSVTTEGATDSAAVEIEGFMELERLTGWPRRAAARISGVFEYADQHLALKSTMTLTQTGIEPRFKAGQAWYRALGALDSRVVDTTDPEFETYYLPPFGLATPEESFEQLERSLLWFGNEEVDGRLGLDFQIEHYHFAAVEFEPASAVRLLNAEGEPVIDSVPRDPRYTLYSIDSADHRRVPFIASELTRDQLDAIASVEVDATVIVPGELHSFVLTPETPSRHIESLGLTLSVESWDPDGLLVRAHEPGGALPTSFPLIGAFPVNAEGDFLPTFSLRLTHTAIEPLRNAFLETSDEGDHWARAEQFAHSATDTLITSPMEERYGDWIYELGAEGGQPIEGVQVYVYDREVEQRTFVAPNALPTLDGGPVVGERTLEQYREPVLEFSSFELDEVVLEGVRQNRLSAVVPGEGAGRCDISVAGEPMYQGSPVRFSAEQSYGTSQLLFASGAYNDQPGRELVTEHGLKYFYDLEIDVNVD
>NZ_CP045324.1|WP_152438545.1|2690617_2690941_-|hypothetical-protein
MLHRGTVPDSGQLFRVDPSTLRLSKSQHQTLKQIQQRFNLRELPLIAYNRDGKVLEPLSPAYSGNPSEGWDGDGMDLRFWGEIAEVRYPVSMEREARQVSVQFPPLP
>NZ_CP045324.1|WP_152438544.1|2688961_2690587_-|hypothetical-protein
MTRKLLFIVLLCMPLIVQADQRVWFAENGDYYDPANPWHRKASYLELPLPKVDEFYQVKLFYADGQVALEGLSPTPDFNRKDLLGDVVEYYADGQVSVQASYVVRDQICDCGNNYPVLHGTYKAYHPNGQLERSLDYYGGGIADGDYTEYDEAGRVTRRYSIRNYRRHGDYAEYKDGQLTKEAHYVNGAREGNYRELDEQGHLIRKATFLDGKYQGVLETYRDGILASEEHYHEGNRLGLQKTYYPDGTPKRVYIASKFRSQPVGEDLYYRMDGSLSRKVMRVLDDNGRLVESRDEQYGDGERLVKLKHKVGDWQLEEEYSESGELIARREQDDKGLQGLLLTRQWSTLVREHYKDGEKHGDSLREGSGGAREEGRYENGLKTGPWLTLQSNGITEKVNYRAGKRHGRYERFDETGERSDVIHYENGQKHGPADFSDGYGHRVVANFYKDEPDGDYLETTENGRIVRQGNYRLGKPEGVHYEFSSVGQMLKKRSYRDGEPHGEWIEVGYGGMSVIRKHYENGTLISEGDITLDSLSTSRVR
>NZ_CP045324.1|WP_061333619.1|2703368_2704580_-|argininosuccinate-synthase
MSDIKKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGVKEIYIEDLREEFVRDYVFPMFRANTIYEGEYLLGTSIARPLIAKRLIDIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLLKYCEERNIPVEMKKGKSPYSMDANLLHISYEGMNLEDPWAEAEEDMWRWSVSPEAAPDKPTYVELTYKKGDIVAVDGQEMKPHEVLETLNKVAGANGIGRLDIVENRYVGMKSRGCYETPGGTIMLRAHRAIESITLDREVAHLKDSLMPRYAEVIYNGYWWSPEREALQALIDQTQTYVNGTVRLKLYKGNVDVVGRKSDDSLFDEKIATFEEDQGAYDQKDAEGFIKLNALRLRIAAGKGRKL
>NZ_CP045324.1|WP_152438554.1|2704655_2705420_-|transporter-substrate-binding-domain-containing-protein
MAFFRGLLVAFLVAAAHVSANDEVASGESVPATSPAIFAIPDVWPWGFQDDKGELQGSLITLMDRLSELSGVPVSAQLLPLRRVILDLLRGRAEFAFLFQSPDLDENAFPVDTILQLNLMLMAMRDTDFPLTLDGLAGKRVGYVRGTYLGESFKADEAVMKVPVYNIRQAIEMLMLGRISAVLASDHNIAMTIDAYGFPAEEFRLQEHVKGQKARLYMSPDSGNPEHARLLKEALQHMRDNGELQRIFQTSSAQ
>NZ_CP045324.1|WP_152438555.1|2705440_2705839_-|flagellar-export-chaperone-FliS
MNGLQAYQRVNTQTSITDADPHKLIQLLYNGAIERINMAKSKIQAKDYAAKGQLLNKAIEIIGGLRAFLDFEKGGELATRLEALYDYMERTLLEASAKNDVAKLDEVLNLLRSVKDGWDGIRDEVVNQQQAV
>NZ_CP045324.1|WP_152438556.1|2705905_2707873_-|flagellar-filament-capping-protein-FliD
MASISSLGIGSGVLTSDLVDQLVAAERRPTEVRLDQRTERTEALISAYGKLRSAVTELRLPMRQLGSADAMKSFSATSSGSNIDVSVDASKASRGSYSLDVKSLAQSQALASRDVFADRDATSVGRGTMTLQVGDKTTNITIDSSNDTLQGLANAINEANAGVSAGVIDTGNGFQLVLSADETGEANAVNISVSEDGAAPGLSRFAFDTADPDNMDGMRQTIAASDAVMEINGVEIRRATNSIENVVDGLTFNITGEGKSTIKVEQDTAAVAERVQAFVDKFNELQGTIRELSSFDSETGQGSILTGDSTVRNIQNQLKRVLTDIIPGLENASVRSLADVGIGTDFRTGELEFDSQKFQQQLRENPDDVTALFAEQGRTNDSQVEFVRSGSNTRPGDYSINVTQMATRGSLNYSVPNTADAIQVQADNSFTFQVDGETTATVSIAAGDYSGEDFAAAIQTALRENTALSAAGRSVQVAYDATEGLTFTSNRFGSDSNVSLAGLSNVTGLNTATGTAGQDVQGTINGQTAQGDGQVLFLANNAGGDAAGLQVRITGGDVGNRGSVKFIEGVSERAVDTITSILGAEGALSSRTDALNRDLERIQEDRIKLDLRVESYQARLVAQFSAADSLISQLNNTRDYVTQQLAALAPNRQND
>NZ_CP045324.1|WP_152438557.1|2708066_2708501_-|flagellar-protein-FlaG
MNDVNLNSPDLKLVRSGAQAPAKAMSSSQAEGRNAPDLAASAAGTRQVQAPQVAQQASQAEKLQARNEEQRKELNEAVSQLNDFVQTVQRDLQFEVDNEMGQTIVRVVDQQTQEVIRQMPDEVALRLAEKLQQDEPLTLFNIKV
>NZ_CP045324.1|WP_152438558.1|2708572_2710051_-|flagellin
MALGINTNVASLNAQNQLSKSQGMNDQALQRLSSGLRINSAKDDAAGLAISTRFQSQISGLNVATRNANDGISLAQTAEGALNEITNNLQRIRELAVQSANATNSDSDRAALNDEVQQRLEEIDRISSQTAFNGLRVLDGSFGQQDFQVGANAGETIGINLTQGTRASQIGSIAQAELNIDGEALADNQNFTLRVGAGEIQTLEIGEDSSAASIADAIRSSVDGVSSVTAENSQTIDWAGDVTLTTANSGVDTQSYSITIGAGGESVELAFASPAADGSTTITAAMVRDEINSNSILGSVGISASLDGGNLVIQQASGENFTLQEASGSTGAATDPDLAAVGLNDAASAGFTAETTFAGTVSFTAENSVTVAGADVASVGGENSFNAEGFIRDIDISNVPGANEAIARVDAALTSVNSLRGELGAIQNRFESTIANLATSVENLSASNSRILDADFAAETANLAKSQVLQQAGISVLAQANARPQQVLSLLQ
>NZ_CP045324.1|WP_152438559.1|2710233_2710923_-|hypothetical-protein
MLQVLIGSGIAFISAVCGWFISHRWQQRNYRLAVDADRGRLNQSVEKWATEVVDVMNRMHAHFEHSSHQEAIERSRELVLSLSILVDQGRLYFPNVMRGVYGEEKQQSRQGYRSALLDPLVAAIEVSRGVQPEFDLPDTKKKYGSNRNSKALRLYLNAFLSLVERVLLVEVSHQKLVARLTEVGDREEAKQLKRLLCPEPGSGPVPPGHKYWLGQESGPQIPSESVIFK
>NZ_CP045324.1|WP_152438560.1|2710959_2711283_-|nucleotidyltransferase-domain-containing-protein
MAETPIPDIFKEHAGDLAELCRRHHVSRIAVFGSATTDRFREESDLDFLVSFETDLSARQTAAAFFDLKLELEALFNRPVDLITKASLTNPCFRQSVLAVQRELYAA
>NZ_CP045324.1|WP_152438561.1|2711641_2713114_+|flagellin
MPQVINTNIASLNAQRNLNASQGDANVALQRLSSGLRINSAKDDAAGLAISERFQSQIAGLNQAQRNANDGISLAQTAEGAMDEITNNLQRIRELAVQSANATNSISDRQALNQEVQQRIEEINRIASQTSFNGLKVLDGTFGTQTFQVGANTGETIGVSGLDSRGSQLGATVGKTTNFSSQLVPFPPVETNALGLDYETNVSGDLIIDGTTVPIAYTGAVGNDIEDLAAEIQAQLTTPFPGLTVTGDTANDTLIFTNESGETVQVAIDLTDNDTPASTFAQSFESTGGSLADFFTANEEASIDFTVNGISFTADNVTSLNDVIGAINARSNETGVEANLDRTNQEIIFASQFGEDIAVQFTADLDGDGVDDIDVDETYAAATNTASLNTTDISTPDGADLAMITIDYAIDKINSFRAELGAVQNRFESTIANLSTTSENLSASNSRIRDADFAAETAELARTQVLQQAGLSVLAQANARPQQVLQLLQG
>NZ_CP045324.1|WP_061333890.1|2713317_2713557_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MESVNMHEAKTRLSQLVARAAKGEAFIIAKAGKPVARVTAYDSPEESQQRRLGFLAGEFKVPDDFDRMGQDEITELFGG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1514271 : 1575011

Marinobacter_phage(87.3%)

capsid,head,terminase,portal,integrase

attL 1517117:1517130|attR 1574946:1574959

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152437798.1\|1514271_1515291_+\|integrase	tyrosine-type recombinase/integrase	A0A2D1GMX8	Marinobacter_phage	8.1e-181	88.5
WP_152437799.1\|1515874_1516066_+	hypothetical protein	NA	NA	NA	NA
WP_152437800.1\|1516244_1516832_+	hypothetical protein	NA	NA	NA	NA
WP_152437801.1\|1516885_1517314_+	hypothetical protein	I1TRH1	Cronobacter_phage	1.1e-30	50.7
1517117:1517130	attL	NA	NA	NA	NA
WP_152437802.1\|1517328_1517535_+	hypothetical protein	NA	NA	NA	NA
WP_152437803.1\|1517547_1518165_+	hypothetical protein	A0A2D1GMI6	Marinobacter_phage	1.2e-30	52.1
WP_152437804.1\|1518178_1518490_+	hypothetical protein	A0A2D1GMT5	Marinobacter_phage	3.8e-41	74.5
WP_152437805.1\|1519277_1519496_-	hypothetical protein	A0A2D1GMW2	Marinobacter_phage	2.9e-27	78.6
WP_172972252.1\|1519492_1519663_-	hypothetical protein	A0A2D1GMH9	Marinobacter_phage	5.5e-10	62.7
WP_152437806.1\|1519762_1520419_-	helix-turn-helix domain-containing protein	A0A2D1GMW5	Marinobacter_phage	5.9e-100	82.1
WP_152437807.1\|1520647_1522015_-	ATP-dependent helicase	A0A2D1GMQ1	Marinobacter_phage	4.9e-242	91.4
WP_152437808.1\|1522017_1522242_-	hypothetical protein	A0A2D1GML2	Marinobacter_phage	1.2e-25	74.3
WP_152437809.1\|1522238_1522562_-	hypothetical protein	NA	NA	NA	NA
WP_152437810.1\|1522569_1523547_-	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	6.9e-105	56.4
WP_152437811.1\|1523562_1523934_-	VRR-NUC domain-containing protein	A0A2D1GMU3	Marinobacter_phage	2.3e-40	73.1
WP_152437812.1\|1523947_1524928_-	site-specific DNA-methyltransferase	M4R1Z8	Salicola_phage	9.0e-113	67.4
WP_152437813.1\|1524917_1525142_-	hypothetical protein	A0A2D1GMN3	Marinobacter_phage	8.5e-27	76.1
WP_152437814.1\|1525138_1525417_-	DUF3310 domain-containing protein	A0A1U9WQP3	Geobacillus_phage	5.1e-05	36.7
WP_152437815.1\|1525413_1527489_-	hypothetical protein	A0A2D1GMR3	Marinobacter_phage	0.0e+00	82.9
WP_152437816.1\|1527491_1527953_-	dUTP diphosphatase	A0A2D1GMV1	Marinobacter_phage	2.9e-61	74.5
WP_152437817.1\|1527949_1528543_-	3'-5' exoribonuclease	A0A2D1GMH0	Marinobacter_phage	1.2e-91	82.1
WP_152480526.1\|1528542_1528755_-	hypothetical protein	NA	NA	NA	NA
WP_172972253.1\|1528824_1529499_-	DUF2815 family protein	A0A2D1GMP0	Marinobacter_phage	2.2e-94	86.7
WP_152437820.1\|1529510_1530713_-	DUF2800 domain-containing protein	A0A2D1GMK3	Marinobacter_phage	7.3e-197	83.2
WP_152437821.1\|1530723_1531419_-	hypothetical protein	A0A2D1GMT4	Marinobacter_phage	5.0e-41	61.7
WP_152437822.1\|1531541_1531808_+	hypothetical protein	A0A2D1GMM2	Marinobacter_phage	6.6e-26	68.3
WP_152437823.1\|1531817_1534190_+	hypothetical protein	A0A2D1GMG5	Marinobacter_phage	0.0e+00	77.0
WP_152437824.1\|1534815_1535385_+	DUF1441 family protein	A0A2D1GMS2	Marinobacter_phage	2.0e-88	86.0
WP_152437825.1\|1535384_1537910_+\|terminase	phage terminase large subunit family protein	A0A2D1GMP8	Marinobacter_phage	0.0e+00	74.8
WP_152437826.1\|1537943_1538150_+	hypothetical protein	A0A2D1GMG1	Marinobacter_phage	1.9e-25	85.3
WP_152437827.1\|1538149_1539772_+\|portal	phage portal protein	A0A2D1GMT8	Marinobacter_phage	2.6e-266	81.1
WP_172972254.1\|1539764_1541060_+	S49 family peptidase	A0A2D1GMM6	Marinobacter_phage	5.1e-188	79.1
WP_152437829.1\|1541103_1541478_+\|head	head decoration protein	A0A2D1GMJ4	Marinobacter_phage	4.0e-45	70.2
WP_152437830.1\|1541514_1542564_+\|capsid	major capsid protein	A0A2D1GMR5	Marinobacter_phage	8.4e-157	75.0
WP_152437831.1\|1542635_1542935_+	hypothetical protein	A0A2D1GMK4	Marinobacter_phage	2.1e-12	77.6
WP_152437832.1\|1542935_1543259_+	hypothetical protein	A0A2D1GME9	Marinobacter_phage	2.2e-52	89.7
WP_152437833.1\|1543255_1543906_+	hypothetical protein	A0A2D1GMQ3	Marinobacter_phage	4.6e-73	63.9
WP_152437834.1\|1543898_1544375_+	hypothetical protein	A0A2D1GMN0	Marinobacter_phage	3.4e-65	69.6
WP_172972255.1\|1544367_1544544_+	hypothetical protein	NA	NA	NA	NA
WP_152437835.1\|1544564_1545353_+	hypothetical protein	A0A2D1GMD2	Marinobacter_phage	1.8e-116	78.2
WP_152437836.1\|1545382_1545844_+	hypothetical protein	A0A2D1GMS0	Marinobacter_phage	9.3e-60	73.2
WP_152437837.1\|1546057_1550569_+	tape measure protein	A0A2D1GMH6	Marinobacter_phage	0.0e+00	66.6
WP_152437838.1\|1550568_1551531_+	hypothetical protein	A0A2D1GMZ0	Marinobacter_phage	1.5e-107	63.2
WP_152437839.1\|1552528_1554211_+	hypothetical protein	A0A2D1GMM3	Marinobacter_phage	1.1e-211	65.3
WP_152437840.1\|1554207_1554996_+	phage BR0599 family protein	A0A2D1GMX5	Marinobacter_phage	1.6e-107	71.2
WP_152437841.1\|1555005_1555236_+	hypothetical protein	A0A2D1GMV4	Marinobacter_phage	1.1e-29	80.3
WP_152437842.1\|1555232_1555430_+	hypothetical protein	A0A2D1GN09	Marinobacter_phage	5.0e-23	83.6
WP_152437843.1\|1555426_1557838_+	hypothetical protein	A0A2D1GML5	Marinobacter_phage	4.8e-06	37.2
WP_152437844.1\|1557837_1558914_+	DUF2793 domain-containing protein	A0A2D1GN08	Marinobacter_phage	5.0e-32	68.3
WP_152437845.1\|1558910_1559630_+	hypothetical protein	A0A1L2C9I2	Pseudomonas_phage	1.2e-24	34.7
WP_152437846.1\|1559728_1560169_+	hypothetical protein	A0A2D1GMP4	Marinobacter_phage	5.8e-35	58.2
WP_152437847.1\|1560181_1560652_+	hypothetical protein	A0A2D1GMY0	Marinobacter_phage	4.5e-70	76.9
WP_152437848.1\|1560648_1560930_+	hypothetical protein	A0A2D1GMR7	Marinobacter_phage	2.9e-32	71.0
WP_152437849.1\|1560926_1562336_+	hypothetical protein	NA	NA	NA	NA
WP_152437850.1\|1562335_1563535_+	hypothetical protein	A0A2D1GMW8	Marinobacter_phage	7.8e-34	36.4
WP_152437851.1\|1563558_1563888_+	hypothetical protein	A0A2D1GMU4	Marinobacter_phage	3.0e-36	64.8
WP_152437852.1\|1563890_1564289_+	hypothetical protein	A0A2D1GMZ8	Marinobacter_phage	2.9e-17	72.7
WP_152437853.1\|1564285_1564552_+	hypothetical protein	A0A2D1GMK7	Marinobacter_phage	7.5e-22	64.0
WP_152437854.1\|1564546_1565494_-	recombination-associated protein RdgC	A0A2D1GMZ9	Marinobacter_phage	6.4e-124	72.2
WP_152437855.1\|1565538_1565850_-	hypothetical protein	A0A2D1GMS6	Marinobacter_phage	2.3e-14	86.0
WP_152437856.1\|1565867_1566344_-	hypothetical protein	A0A2D1GMX0	Marinobacter_phage	9.4e-23	37.1
WP_152437857.1\|1566595_1566907_-	hypothetical protein	A0A2D1GMK8	Marinobacter_phage	1.0e-38	70.9
WP_152437858.1\|1567001_1568279_-	hypothetical protein	A0A2D1GMV6	Marinobacter_phage	6.8e-169	64.8
WP_152437859.1\|1568453_1568639_+	hypothetical protein	A0A2D1GMT7	Marinobacter_phage	5.4e-11	59.3
WP_152437860.1\|1568631_1569015_+	hypothetical protein	A0A2D1GMY9	Marinobacter_phage	1.5e-18	48.5
WP_152437861.1\|1569074_1569392_+	hypothetical protein	A0A2D1GMY8	Marinobacter_phage	1.5e-40	76.5
WP_152437862.1\|1569496_1569760_+	hypothetical protein	NA	NA	NA	NA
WP_152437863.1\|1569746_1570268_+	hypothetical protein	A0A2D1GMU5	Marinobacter_phage	1.1e-11	41.3
WP_152437864.1\|1570572_1571184_+	hypothetical protein	I6NSG1	Burkholderia_phage	1.5e-28	38.9
WP_152439609.1\|1571184_1571652_+\|integrase	tyrosine-type recombinase/integrase	L7TP61	Pseudomonas_virus	5.2e-42	53.1
WP_152437866.1\|1572291_1572495_+	hypothetical protein	NA	NA	NA	NA
WP_152437867.1\|1572554_1573547_-	DNA adenine methylase	NA	NA	NA	NA
WP_152437868.1\|1573556_1575011_-	hypothetical protein	Q7Y4B3	Escherichia_virus	4.3e-10	28.2
1574946:1574959	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1796617 : 1809425

Klosneuvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152437976.1\|1796617_1798492_-	propionyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	1.9e-63	32.9
WP_152437977.1\|1798603_1799983_-	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	8.4e-32	31.2
WP_072677490.1\|1800173_1801637_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.6e-92	40.8
WP_152437978.1\|1801702_1803280_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.6e-18	34.3
WP_172972320.1\|1803333_1803816_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.1e-05	29.3
WP_152437980.1\|1803812_1804802_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.1e-52	37.2
WP_152437981.1\|1804865_1806212_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	7.6e-78	37.0
WP_152437982.1\|1806227_1806638_+	HIT family protein	NA	NA	NA	NA
WP_072677487.1\|1806650_1807277_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
WP_152437983.1\|1807625_1809425_+\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	2.6e-12	25.5

DBSCAN-SWA_3

2580359 : 2590067

Raoultella_phage(14.29%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152438470.1\|2580359_2581088_-	hypothetical protein	A0A2H4YGH4	Raoultella_phage	2.3e-65	53.2
WP_152438471.1\|2581126_2581375_-	hypothetical protein	NA	NA	NA	NA
WP_152438472.1\|2583368_2585072_-\|terminase	phage terminase large subunit	A0A2R2ZGE7	Ralstonia_phage	1.5e-179	57.2
WP_152438473.1\|2585133_2585373_-	hypothetical protein	L7TQZ6	Rhizobium_phage	3.5e-10	52.8
WP_152438474.1\|2585369_2585600_-	HNH endonuclease	A0A0R6CMK3	Citrobacter_phage	1.6e-12	58.5
WP_152439651.1\|2585562_2586057_-	hypothetical protein	M1IDQ5	Pelagibacter_phage	1.1e-29	44.9
WP_152438475.1\|2586092_2586272_-	hypothetical protein	A0A2I7RXE7	Vibrio_phage	3.3e-05	53.1
WP_152438476.1\|2586287_2586530_-	hypothetical protein	NA	NA	NA	NA
WP_152438477.1\|2586533_2590067_-	hypothetical protein	M4QPP7	Synechococcus_phage	4.0e-17	33.2

DBSCAN-SWA_4

2597230 : 2617029

Ralstonia_phage(20.0%)

tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152438482.1\|2597230_2599822_-	hypothetical protein	V5YUX0	Pseudomonas_phage	8.4e-41	22.9
WP_152438483.1\|2600013_2600628_-\|tail	phage tail protein	A0A076YQK3	Mesorhizobium_phage	5.6e-28	38.8
WP_152438484.1\|2600781_2601837_-\|capsid	capsid protein	L7TJ83	Rhizobium_phage	3.3e-44	36.9
WP_152438485.1\|2601906_2602599_-	hypothetical protein	M4NV33	Synechococcus_phage	1.0e-14	38.1
WP_152438486.1\|2602579_2604112_-\|tail	phage tail protein	A0A1B1IVX5	uncultured_Mediterranean_phage	7.6e-90	39.1
WP_172972276.1\|2604322_2604490_-	hypothetical protein	NA	NA	NA	NA
WP_152438487.1\|2604510_2604765_-	hypothetical protein	NA	NA	NA	NA
WP_152438488.1\|2604777_2604990_-	hypothetical protein	NA	NA	NA	NA
WP_152438489.1\|2604980_2605304_-	hypothetical protein	S4TU57	Salmonella_phage	2.0e-13	52.4
WP_152438490.1\|2605285_2606128_-	exonuclease	A0A2D2W4Z8	Ralstonia_phage	5.8e-60	45.6
WP_152438491.1\|2606127_2608068_-	DNA polymerase	A0A2R2ZGG6	Ralstonia_phage	1.4e-162	47.6
WP_152480530.1\|2608076_2608325_-	hypothetical protein	NA	NA	NA	NA
WP_152438493.1\|2608327_2609935_-	toprim domain-containing protein	A0A076YQI9	Mesorhizobium_phage	2.6e-141	50.5
WP_152438494.1\|2609938_2610310_-	hypothetical protein	NA	NA	NA	NA
WP_152438495.1\|2610328_2610691_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_172972277.1\|2610629_2610959_-	RusA family crossover junction endodeoxyribonuclease	A8HP85	Thalassomonas_phage	2.3e-12	46.8
WP_152438497.1\|2611045_2611663_-	hypothetical protein	A0A0U1ZHK1	Ralstonia_phage	1.0e-08	31.6
WP_152438498.1\|2611931_2613893_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	Q9G0G5	Roseobacter_virus	7.6e-236	62.8
WP_152438499.1\|2613889_2614111_-	hypothetical protein	NA	NA	NA	NA
WP_152438500.1\|2614107_2614425_-	nucleotide pyrophosphohydrolase	A0A0S2MU17	Streptomyces_phage	1.1e-19	47.7
WP_152438501.1\|2614428_2614641_-	hypothetical protein	NA	NA	NA	NA
WP_152438502.1\|2614627_2614885_-	hypothetical protein	NA	NA	NA	NA
WP_152438503.1\|2614881_2615868_-	FAD-dependent thymidylate synthase	A0A218MKB9	uncultured_virus	1.1e-33	32.3
WP_152438504.1\|2615880_2616444_-	hypothetical protein	NA	NA	NA	NA
WP_152438505.1\|2616454_2616649_-	hypothetical protein	NA	NA	NA	NA
WP_152438506.1\|2616744_2617029_-	hypothetical protein	A0A1X9IAG1	Xanthomonas_phage	6.8e-05	47.3

DBSCAN-SWA_5

3896805 : 3965198

Organic_Lake_phycodnavirus(28.57%)

protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152439339.1\|3896805_3898257_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_058091607.1\|3898552_3898993_+	OmpA family protein	NA	NA	NA	NA
WP_058091608.1\|3899057_3899459_-	MAPEG family protein	NA	NA	NA	NA
WP_061330921.1\|3899460_3899703_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_152439340.1\|3899777_3900497_-	1-acylglycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA
WP_152439341.1\|3900544_3901126_-	class GN sortase	NA	NA	NA	NA
WP_152439342.1\|3901122_3903261_-	marine proteobacterial sortase target protein	A0A2K9L1L0	Tupanvirus	8.8e-20	22.1
WP_152439343.1\|3903442_3904144_+	proteobacterial dedicated sortase system response regulator	NA	NA	NA	NA
WP_152439344.1\|3904146_3906198_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_152439345.1\|3906194_3907502_+	DUF3422 domain-containing protein	NA	NA	NA	NA
WP_152439346.1\|3907508_3908288_-	ATP-binding protein	NA	NA	NA	NA
WP_152439704.1\|3908482_3911377_+	transporter substrate-binding domain-containing protein	A0A127AWB9	Bacillus_phage	5.2e-15	32.0
WP_106694054.1\|3911426_3912005_-	porin family protein	NA	NA	NA	NA
WP_152439347.1\|3912135_3912438_-	hypothetical protein	NA	NA	NA	NA
WP_152439348.1\|3912434_3913346_-	hypothetical protein	NA	NA	NA	NA
WP_061330931.1\|3913580_3914174_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_152439349.1\|3914170_3915061_-	DNA ligase	F2Y1N0	Organic_Lake_phycodnavirus	9.0e-35	37.8
WP_058091620.1\|3915113_3915551_-	YtoQ family protein	NA	NA	NA	NA
WP_152439350.1\|3915664_3916984_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_152439351.1\|3917150_3918842_-	Hsp70 family protein	F2Y0P3	Organic_Lake_phycodnavirus	1.6e-80	36.2
WP_152439352.1\|3918859_3921547_-	hypothetical protein	NA	NA	NA	NA
WP_152439353.1\|3921597_3922338_-	DUF1266 domain-containing protein	NA	NA	NA	NA
WP_152439354.1\|3922409_3927659_-	DNA repair ATPase	NA	NA	NA	NA
WP_152439355.1\|3927737_3929741_-	hypothetical protein	NA	NA	NA	NA
WP_152439356.1\|3929784_3930411_-	hypothetical protein	NA	NA	NA	NA
WP_058091627.1\|3930617_3931022_+	YjfI family protein	NA	NA	NA	NA
WP_152439357.1\|3931036_3931732_+	PspA/IM30 family protein	NA	NA	NA	NA
WP_152439358.1\|3931778_3932102_+	hypothetical protein	NA	NA	NA	NA
WP_152439359.1\|3932111_3933275_-	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	5.0e-86	44.3
WP_172972299.1\|3933438_3934173_+	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_152439361.1\|3934179_3935088_+	hypothetical protein	NA	NA	NA	NA
WP_152439362.1\|3935091_3935817_+	hypothetical protein	NA	NA	NA	NA
WP_152439363.1\|3935813_3936902_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_152439364.1\|3936953_3938603_-	hypothetical protein	NA	NA	NA	NA
WP_152439365.1\|3938648_3939104_-	hypothetical protein	NA	NA	NA	NA
WP_152439366.1\|3939225_3939468_-	hypothetical protein	NA	NA	NA	NA
WP_152439367.1\|3939590_3940136_-	hypothetical protein	NA	NA	NA	NA
WP_152439368.1\|3940202_3941366_-	hypothetical protein	NA	NA	NA	NA
WP_152439369.1\|3941358_3945477_-	hypothetical protein	NA	NA	NA	NA
WP_152439370.1\|3945516_3946056_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_152439371.1\|3946073_3948197_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.6e-32	26.9
WP_152439372.1\|3948299_3951893_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_152439373.1\|3951917_3953360_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_152439374.1\|3953370_3954012_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_152439705.1\|3954008_3955574_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_172972300.1\|3955751_3958394_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	5.1e-94	31.5
WP_058090740.1\|3958404_3959226_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_061331933.1\|3959229_3960564_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_072676015.1\|3960563_3961097_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_152439376.1\|3961093_3962428_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_152439377.1\|3962445_3963462_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_152439378.1\|3963425_3965198_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_6

4075318 : 4146376

Klosneuvirus(25.0%)

holin,protease,integrase,transposase

attL 4087089:4087105|attR 4120979:4120995

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_091642703.1\|4075318_4076917_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	4.8e-55	30.9
WP_172972330.1\|4077017_4078640_+	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.8e-25	27.8
WP_091642699.1\|4078725_4079397_+	OmpW family protein	NA	NA	NA	NA
WP_054645368.1\|4079785_4080814_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	5.8e-70	41.1
WP_091642696.1\|4081362_4082613_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_091642693.1\|4082701_4084357_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	8.0e-61	30.7
WP_091642690.1\|4084356_4085769_-	cytochrome P450	NA	NA	NA	NA
WP_091642688.1\|4085783_4086104_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_091642684.1\|4086233_4087277_+	AraC family transcriptional regulator	NA	NA	NA	NA
4087089:4087105	attL	NA	NA	NA	NA
WP_091642682.1\|4087346_4087961_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_091642679.1\|4088219_4088705_+	PaaI family thioesterase	NA	NA	NA	NA
WP_091642677.1\|4088701_4089205_+	PaaI family thioesterase	NA	NA	NA	NA
WP_091642674.1\|4089194_4090097_+	alpha/beta hydrolase	A0A223FN69	NY_014_poxvirus	1.0e-06	31.3
WP_072678647.1\|4090134_4091187_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_072678648.1\|4091183_4094222_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_152439434.1\|4094491_4094935_-	hypothetical protein	I6X231	Vibriophage	1.5e-19	41.5
WP_152439435.1\|4095355_4095643_-	hypothetical protein	NA	NA	NA	NA
WP_152439436.1\|4095882_4096320_+	hypothetical protein	NA	NA	NA	NA
WP_152439437.1\|4096531_4100383_+	hypothetical protein	NA	NA	NA	NA
WP_152439438.1\|4100505_4101348_-	hypothetical protein	NA	NA	NA	NA
WP_152439439.1\|4101337_4102573_-	hypothetical protein	NA	NA	NA	NA
WP_152439440.1\|4102569_4103208_-	hypothetical protein	NA	NA	NA	NA
WP_152439441.1\|4103197_4106929_-	ATP-binding protein	NA	NA	NA	NA
WP_152439442.1\|4107011_4107530_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_152439443.1\|4107629_4108283_-	hypothetical protein	NA	NA	NA	NA
WP_152439444.1\|4108537_4109170_+	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_152439445.1\|4109182_4111141_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_172972304.1\|4111133_4112120_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_152439447.1\|4112119_4113634_+	TniQ family protein	NA	NA	NA	NA
WP_152439712.1\|4115016_4115358_+	hypothetical protein	NA	NA	NA	NA
WP_152439448.1\|4115864_4116410_+	hypothetical protein	NA	NA	NA	NA
WP_172972305.1\|4116832_4118008_-	NYN domain-containing protein	NA	NA	NA	NA
WP_152439450.1\|4118248_4120072_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_152439451.1\|4121059_4121989_+	EamA family transporter	NA	NA	NA	NA
4120979:4120995	attR	NA	NA	NA	NA
WP_146136838.1\|4121966_4122380_-	hypothetical protein	NA	NA	NA	NA
WP_152439452.1\|4122515_4123100_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_152439453.1\|4123135_4123768_-	NAAT family transporter	NA	NA	NA	NA
WP_152439454.1\|4123863_4124853_-	23S rRNA pseudouridine(2604) synthase RluF	NA	NA	NA	NA
WP_152439455.1\|4124957_4126052_-	sterol desaturase family protein	NA	NA	NA	NA
WP_152439549.1\|4126076_4127291_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.8e-49	49.5
WP_152439456.1\|4127558_4127966_-	hypothetical protein	NA	NA	NA	NA
WP_152439457.1\|4127962_4129585_-	S-type pyocin domain-containing protein	NA	NA	NA	NA
WP_152439458.1\|4129734_4131318_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_152439459.1\|4131856_4132495_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_052009733.1\|4132519_4132831_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_072675936.1\|4132984_4134097_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_152439460.1\|4134186_4134651_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_152439461.1\|4134820_4135549_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_152439462.1\|4135658_4136990_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	7.3e-49	33.5
WP_152439463.1\|4137336_4138188_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_152439464.1\|4138210_4139515_-	hypothetical protein	NA	NA	NA	NA
WP_072675930.1\|4139610_4139979_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_152439465.1\|4140040_4141129_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_152439466.1\|4141130_4142657_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_152439467.1\|4142892_4143762_+	carbohydrate kinase family protein	NA	NA	NA	NA
WP_172972331.1\|4143774_4144311_-	YgjV family protein	NA	NA	NA	NA
WP_152439469.1\|4144360_4145515_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_152439470.1\|4145704_4146376_+\|protease	cysteine protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045324

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection