CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP045360	Roseivivax sp. THAF40 chromosome, complete genome	2 crisprs	csa3,WYL,DEDDh,RT,cas3	5
NZ_CP045366	Roseivivax sp. THAF40 plasmid pTHAF40_f, complete sequence	0 crisprs	NA	0
NZ_CP045362	Roseivivax sp. THAF40 plasmid pTHAF40_b, complete sequence	0 crisprs	NA	1
NZ_CP045363	Roseivivax sp. THAF40 plasmid pTHAF40_c, complete sequence	0 crisprs	NA	0
NZ_CP045364	Roseivivax sp. THAF40 plasmid pTHAF40_d, complete sequence	0 crisprs	NA	0
NZ_CP045365	Roseivivax sp. THAF40 plasmid pTHAF40_e, complete sequence	0 crisprs	NA	0
NZ_CP045361	Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045360_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045360_1

481612-481727

Orphan

Consensus_repeat	Method
AATAATCTGCGAGGCGTCGAGATGCCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045360_1

>merge|NZ_CP045360|1|481612-481727|CRISPRCasFinder
AATAATCTGCGAGGCGTCGAGATGCCCTGAAGAACCTGTGTGTTCCGACCTTCGCTCTGGACGAGCAGTTCTGGATTATTTCCGTGGAAATAATCTGCGAGCCGTCGAGATGCCCT

>NZ_CP045360|1|1|481612-481727|CRISPRCasFinder
AATAATCTGCGAGGCGTCGAGATGCCCT	GAAGAACCTGTGTGTTCCGACCTTCGCTCTGGACGAGCAGTTCTGGATTATTTCCGTGGA
AATAATCTGCGAGCCGTCGAGATGCCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045360.1\|WP_152455130.1\|482005_482197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152455138.1\|483310_484339_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271181
NZ_CP045360.1\|WP_152455120.1\|475795_476797_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183400
NZ_CP045360.1\|WP_152455126.1\|479633_480308_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP045360.1\|WP_152455134.1\|482664_482820_+\|Arc-family-DNA-binding-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152455128.1\|480532_481081_+\|RNA-2'-phosphotransferase	unknown	unknown	gnl\|CDD\|179136
NZ_CP045360.1\|WP_172976553.1\|477744_478041_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP045360.1\|WP_152448462.1\|486735_487185_+\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_CP045360.1\|WP_152455113.1\|471257_471890_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271188
NZ_CP045360.1\|WP_152455115.1\|472308_472764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259872
NZ_CP045360.1\|WP_152448463.1\|487186_487885_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP045360.1\|WP_152455136.1\|483107_483317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152448460.1\|485652_485853_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
NZ_CP045360.1\|WP_152455117.1\|473826_474981_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274821
NZ_CP045360.1\|WP_152448459.1\|484714_485296_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152455124.1\|478233_479595_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP045360.1\|WP_152455132.1\|482226_482571_-\|Arc-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|367702
NZ_CP045360.1\|WP_152448461.1\|486008_486542_+\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP045360.1\|WP_152449695.1\|472780_473746_-\|PQQ-dependent-catabolism-associated-beta-propeller-protein	unknown	unknown	gnl\|CDD\|274824
NZ_CP045360.1\|WP_152455111.1\|469934_470789_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117

Protein	Function_ID	Function_description	E-value
NZ_CP045360.1\|WP_152448463.1\|487186_487885_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	2.74664e-139
NZ_CP045360.1\|WP_152455120.1\|475795_476797_+\|tryptophan--tRNA-ligase	gnl\|CDD\|183400	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.	0
NZ_CP045360.1\|WP_152455126.1\|479633_480308_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.50196e-20
NZ_CP045360.1\|WP_152455138.1\|483310_484339_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	2.79646e-15
NZ_CP045360.1\|WP_152455128.1\|480532_481081_+\|RNA-2'-phosphotransferase	gnl\|CDD\|179136	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed.	6.89743e-83
NZ_CP045360.1\|WP_172976553.1\|477744_478041_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.90283e-11
NZ_CP045360.1\|WP_152448462.1\|486735_487185_+\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	1.11182e-83
NZ_CP045360.1\|WP_152455113.1\|471257_471890_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271188	cd01188, INT_RitA_C_like, C-terminal catalytic domain of recombinase RitA, a component of the recombinase trio. Recombinases RitA (also known as pAE1), RitB, and RitC are encoded by three adjacent and overlapping genes. Collectively they are known as the Recombinase in Trio (RIT). This RitA family includes various bacterial integrases and integrases from the deletion-prone region of plasmid pAE1 of Alcaligenes eutrophus H1. All three integrases contain a catalytic motif, suggesting that they are all active enzymes. However, their specific roles are not fully understood. All three families belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.08598e-41
NZ_CP045360.1\|WP_152455115.1\|472308_472764_-\|hypothetical-protein	gnl\|CDD\|259872	cd04210, Cupredoxin_like_1, Uncharacterized Cupredoxin-like subfamily. Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins because they have an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. Majority of family members contain multiple cupredoxin domain repeats; ceruloplasmin and coagulation factors V/VIII have six repeats; Laccase, ascorbate oxidase, and spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase and the periplasmic domain of cytochrome c oxidase subunit II.	0.00813157
NZ_CP045360.1\|WP_152448460.1\|485652_485853_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	1.60246e-13
NZ_CP045360.1\|WP_152455117.1\|473826_474981_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274821	TIGR03863, PQQ_ABC_bind, ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are putative substrate-binding proteins of an ABC transporter family that associates, in gene neighborhood and phylogenomic profile, with pyrroloquinoline-quinone (PQQ)-dependent degradation of certain alcohols, such as 2-phenylethanol in Pseudomonas putida U. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.50951e-163
NZ_CP045360.1\|WP_152455124.1\|478233_479595_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	8.35206e-18
NZ_CP045360.1\|WP_152455132.1\|482226_482571_-\|Arc-family-DNA-binding-protein	gnl\|CDD\|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	1.40596e-07
NZ_CP045360.1\|WP_152448461.1\|486008_486542_+\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	5.95659e-83
NZ_CP045360.1\|WP_152449695.1\|472780_473746_-\|PQQ-dependent-catabolism-associated-beta-propeller-protein	gnl\|CDD\|274824	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.	0
NZ_CP045360.1\|WP_152455111.1\|469934_470789_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.33837e-22

>NZ_CP045360.1|WP_152455128.1|480532_481081_+|RNA-2'-phosphotransferase
MSRESRFLSLVLRHKPEEIGLKLDGAGWVEVDNLLRALKRSGRGLSRDALEKVVAENDKRRFTISEDGRRIRAAQGHSVEVDLELPPSPPPASLYHGTARGNLDEIFRIGILPRRRRQVHLSCDAETALSVGQRHGKAVVLQIAAAAMASEGYTFHCADNGVWLTDEVPPTFIGFATNPLPD
>NZ_CP045360.1|WP_152455126.1|479633_480308_+|IS3-family-transposase
MVERLLRAGSDMTFAFVARHRHIWPVSWMCEVLGVSRSGFHAWLRRPISNRAAYDAKLVMAIDKSFKASDRTYGARRVWRDVLEDGLACGLHRVERLMRQNAMRVRPKRRGKPKDDGERSVIADNILARDFEADRPNQKWLADFTYIWTAEGWLSSDRFMAVPCLARDAPRVAGRVNGRAPVRREIHDSTRFPVVFLSCMRPPHGAASRPVAASGHDRISFPRR
>NZ_CP045360.1|WP_152455124.1|478233_479595_+|IS110-family-transposase
MTKHKTGDHPDLKLVNLQAAAIDIGSTMHMAAVNPDADIMPVRAFGTFTQDLHDLADWFRSCGVTSVAMESTGVYWIPAFEILEAHGFEVILVNARYAKNVPGRKTDVSDAGWLRQLHSYGLLRGSFRPEAEITTLRAYMRQRERLTEYAAAHIQHMQKALMEMNLQLHHVVSDITGATGMRIIRAIVAGERDPEVLAAHRDLRCKASTETIKAALVGNDREEHVFALTQSLELYDFYKAQIEVCDRRLEAAVGALTVRADDDLAPLPKARIRSRQQNAPSFDVRAALYGVLGTDLTQVHGLGPSLGLKLVAECGTDLCAWKSAKHFTSWLCLAPGNKISGGKLLSSRTRRSSNRAAALLRLAAVTIGRTDTALGAFYRRLSSRIGKQKAVTATARKIAVLFYNAVRHGMTYQDQGAAAYDERHRQRVLSNLQRRARILGYALAPMPEQQAVS
>NZ_CP045360.1|WP_172976553.1|477744_478041_+|transposase
MDMTRRKFSREFKIEAVKLVTERGVTVSQACRDLELAESVLRRWMREAAETSASAFPGNGQQRAELAEIATLKKEVAKLKAERDILKNRSGPQPACAR
>NZ_CP045360.1|WP_152455120.1|475795_476797_+|tryptophan--tRNA-ligase
MMKPTILTGDRTTGPLHIGHYAGSLANRLRYQDSHEQFLLLADTQALTDNAHDTDKVRRSVIEVALDYLAVGIDPSRTTICLQSHLPALAELSMLYLNFVTVARLERNPTIKDEIRARGFGRDIPAGFLCYPAAQAADITGFKATVVPVGEDQAPLVEQTNEIVRRINTASGRAVLPEAQAIIPRAGRLPGVDGKAKMSKSGGNAIALSASPEQIRSDVRAMFTDPNHLRVEDPGRIEGNAVFTYLDAFDPDQDGLAELKAHYQRGGLGDGKIKARLEAVLQDLIAPIRERRAQLSEDRSYVIEVIKEGTERAREKTEATKREVVNALGLFQL
>NZ_CP045360.1|WP_152455117.1|473826_474981_-|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MLLATAVNFSLTNAASAQVALDIQYLRQEVPPPPVLSNLDRIPEDLGIAGGEVGLADNATTGRFMGQDWTLTVTSVPEGGDWAGAVETALAESPLLLIDAPRENLLAASDIAGEAGALLFNVAVEDSDLRAGACRANVFHTIPSYAMRTDALVQMLRVKRWEDVALVEGQTPEDLVYAEALRASLTKFGMELGSETDWTFDADMRRSASAEVPLLTQELGEYDVLLVSDERQDFGRYILYNTWLPRPVAGSEGLTASAWSPSVEQWGAAQLQSRFTEHAGRDMAPRDYAAWAALRSLGEAVTRTGSATAPDLRAYFLGDEFELAGFLGRPLTFRPWNGQLRQPIPIVHPRALIAQAPLEGFLHQVNELDTLGQDRAEAECTAFE
>NZ_CP045360.1|WP_152449695.1|472780_473746_-|PQQ-dependent-catabolism-associated-beta-propeller-protein
MKLTATLATLTLIAAPALADEIWVSNEKDNTISVIDLDTLEVTRTIETGERPRGITFSQDHSVLYICASDSDAVQVMDPETGEILHDLPSGEDPEQFVLHPDNRRLYIANEDDAITTVVDTETRTVIAQIDVGIEPEGMAVSPDGRIVITTSETTNMAHWIDTETQTLMANTLVDSRPRHAEFIKDGTELWVSAEIGGTISVFDVASQTETAKIEFEIPSINPDRVQPVGFEFTNGDSHAFVALGPSNHVAVVNAETYEVEDYILVGRRVWHMAFNADRSKLFTTNGVSGDVTMIDVASRKAEKTIKVGRFPWGAAFRPTK
>NZ_CP045360.1|WP_152455115.1|472308_472764_-|hypothetical-protein
MIKKTLITSVVAICLPFGAIAQDDGDDARPFGLAGLLSNGNKQDLEPIQLSAGMPLTNEPWTLQSGTYYEFEIQGDGSQELALIGSDFFRAIWIDEIVVEGLEIRPLGLDSIEFDEAGEMEIGFIAIKPGSYHLMIPGSTGDTQRLEITIQ
>NZ_CP045360.1|WP_152455113.1|471257_471890_-|tyrosine-type-recombinase/integrase
MTIANLPAIRACRPAWNKGRIVGQKRPLMPKHVWAIRVRLEIAKNYRDLALFNLAIDSKLRGCDLVKLRVADVYASGQVKERASIIQSKTGHPVRFEITEGSRKSITAWLDDPAMIGSEHLWPGRFHERLHISTRQYARLVRNWVTSIGLDPSSYGTHSMRRTKVAQIYRKTGNLRAVQLLLGHTKMDSTVRYLGVELEDALAISEAVEI
>NZ_CP045360.1|WP_152455111.1|469934_470789_-|helix-turn-helix-domain-containing-protein
MSSALRIAIGTFGRVALLDMDRPLVKHAHAQCHVLLKVEGADTEFDVGGRRVALTDESAVLINAWEHHSYVHRADQPPTIILAMYIEPAWLGAFRGNWEASAGPDFFPRPGGAITPQIRRHVGETAEAMVQAPGDAATHERLIGRLMVSIIERLAPWRNVQPSLRVRAKATRPPDRRIARALALLREDPAGIASMDWLARECGLSRAHFFRLFEADTGISPRVYLNTQRVERAVQAVANETRSFSAISDDLGFSVPAHFSRFFHDHAGSSPSVFRDVSALRDSA
>NZ_CP045360.1|WP_152455130.1|482005_482197_+|hypothetical-protein
MKAILLDAVTASEFPKTAKQTFAREVDCDGELDSILALLSTDDFPVDMIEEVAPFPGNSRWGR
>NZ_CP045360.1|WP_152455132.1|482226_482571_-|Arc-family-DNA-binding-protein
MAGQSRRGTEQFMLRLPEGMRDRIRVAAEANGRSMNAEIVHALEGAFPGNAKIDEIAAAIVAEVEKFKSEKKQAKREATIEGIRDLQLLLQKELDDMVGTSQIADDEDYIKWLK
>NZ_CP045360.1|WP_152455134.1|482664_482820_+|Arc-family-DNA-binding-protein
MAKSISKIQLRLPSDVKAWIESEAVRNGSSQNSEVIRALRDRMAKVGSQST
>NZ_CP045360.1|WP_152455136.1|483107_483317_+|hypothetical-protein
MASISRQSPVIAKETTAARLLDMKPAEFRQLVENGHLPRGNEIAGIRRWDVDELRKIFMGDLADGGFQW
>NZ_CP045360.1|WP_152455138.1|483310_484339_+|tyrosine-type-recombinase/integrase
MVSNSARKKYLHEPKPGYVYVRKSGRYLGRIKAPPGTPEFDREYWEILNGRTYAAKTSWSALITSYRASDRWLKLKPATRATYERVLTYIEEKNGRKDMTRLQRRDVIAAQEANLQRPKFANDIPAIMSVLCEHAIDLGWISANPAKGVRKKPIPEERQRPHVPWTDEAVAKFRAEANPRALLIFEIGRGSVQRPADWVDFNWGDYDGQNLRLRQNKTGKALVLPCDEYLRAALQREIDRLGAFPHPSRPILLSEHGNRLTKSGMGQIMRKERKRLGLMLHDQHALRYRGVMELAWAGCDDDEIMSYSGHETKEMVIKYAGLARQIMRARSAAEKRRLWASA
>NZ_CP045360.1|WP_152448459.1|484714_485296_-|hypothetical-protein
MKRFMTATALTLALTAPAYAATDGEVATIQSYLPEADISGWSDAQVSSALNIIYSNDSRADITGKLSALYADEEFVPMTASITEAEIAILDEYVDGVDYTMLPQPTVDAAIAAAQSGDESDRADRVRALLQDDGEMVSEMNTATTGEVALISSYAPEVDVMTLSDAEVNSALAIIYSNDSRGDISGKLNALFN
>NZ_CP045360.1|WP_152448460.1|485652_485853_+|preprotein-translocase-subunit-SecE
MAKTNPIQFIQQVRAEVSKVVWPTRREVVLTTIMVFIMATLTAIFFALVDLAIRSGLQGVLGIFGG
>NZ_CP045360.1|WP_152448461.1|486008_486542_+|transcription-termination/antitermination-protein-NusG
MAKRWYSVSVLSNFEKKVAEQIRTSVAEQGLEDQIEEVLVPTEEVIEVRRGKKVNTERRFMPGYVLVRMEMSDQGYHLINSINRVTGFLGPQGRPMPMRDAEVQAILGRVQEGEEAPRTLIHFEVGEKVKVNDGPFEDFDGMVEGVDEDNQRLRVSVSIFGRETPVELEFTQVTKQG
>NZ_CP045360.1|WP_152448462.1|486735_487185_+|50S-ribosomal-protein-L11
MAKKLAGKMKLQIPAGQANPSPPVGPALGQRGINIMEFCKAFNAKTQEMEQGAPCPTEITYYQDKSFTMDIKTPPASYYLKKAAGLKPVGKRNRPRGAETPGREVVATVTRKQVREIAEAKMKDLSANDVESAMKIVLGSAKSMGIEVK
>NZ_CP045360.1|WP_152448463.1|487186_487885_+|50S-ribosomal-protein-L1
MAKLGKRTRAAREAFAGKEEITVEEAVSLIKSNANTKFDETVEISMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARGAKAEEAQAAGADIVGAEDLMETVQSGKIEFDRCIATPDMMPIVGRLGKVLGPRNLMPNPKVGTVTMDVKEAVEAAKGGQVQFKAEKAGVVHAGVGKVSFDEAKLVENIRAFVDAVSKAKPAGAKGTYMKKVSLSSTMGPGVTVDVTNATGN

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045360_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045360_2

550489-550591

Orphan

Consensus_repeat	Method
CACGAGCATGAGGAGCATGCCGAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045360_2

>merge|NZ_CP045360|2|550489-550591|CRISPRCasFinder
CACGGGCACGAGGAACACGCCGAGGGCGAGGATCACGAGCACGAGCATGAGGAGCATGCCGAGGGCGAAGATCATGACCACGAGCATGAAGAGCATGCCGAGG

>NZ_CP045360|2|2|550489-550591|CRISPRCasFinder
CACGGGCACGAGGAACACGCCGAGG	GCGAGGATCACGAGCACGAGCATGAGGAGCATGCCGAGGGCGAAGATCATGAC
CACGAGCATGAAGAGCATGCCGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045360.1\|WP_152448518.1\|556471_557317_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224096
NZ_CP045360.1\|WP_152448519.1\|557424_558693_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP045360.1\|WP_152448513.1\|551292_552582_-\|DUF4147-domain-containing-protein	unknown	unknown	gnl\|CDD\|225254
NZ_CP045360.1\|WP_152448521.1\|560049_560643_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP045360.1\|WP_152455146.1\|540204_540816_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152455150.1\|542712_543393_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|365969
NZ_CP045360.1\|WP_152448520.1\|558974_559982_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380512
NZ_CP045360.1\|WP_152448510.1\|548756_549515_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224046
NZ_CP045360.1\|WP_152448515.1\|553268_554546_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225942
NZ_CP045360.1\|WP_152448516.1\|554555_555599_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226359
NZ_CP045360.1\|WP_152452301.1\|547947_548757_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181938
NZ_CP045360.1\|WP_152455156.1\|552585_553272_-\|D-lyxose/D-mannose-family-sugar-isomerase	unknown	unknown	gnl\|CDD\|377827
NZ_CP045360.1\|WP_152455154.1\|545818_547558_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271184
NZ_CP045360.1\|WP_172976555.1\|538158_539340_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_172976556.1\|544837_545797_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379157
NZ_CP045360.1\|WP_152448522.1\|560759_561329_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP045360.1\|WP_152448517.1\|555632_556475_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223472
NZ_CP045360.1\|WP_152455925.1\|543605_544643_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152455148.1\|541881_542490_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045360.1\|WP_152448511.1\|549511_550045_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|183251

Protein	Function_ID	Function_description	E-value
NZ_CP045360.1\|WP_152448518.1\|556471_557317_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.55201e-52
NZ_CP045360.1\|WP_152448516.1\|554555_555599_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	1.73148e-161
NZ_CP045360.1\|WP_152448521.1\|560049_560643_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	3.87647e-08
NZ_CP045360.1\|WP_152455150.1\|542712_543393_+\|recombinase-family-protein	gnl\|CDD\|365969	pfam00239, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see pfam02796.	6.16189e-30
NZ_CP045360.1\|WP_152448520.1\|558974_559982_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380512	cd06289, PBP1_MalI-like, ligand-binding domain of MalI, a transcription regulator of the maltose system of Escherichia coli and its close homologs from other bacteria. This group includes the ligand-binding domain of MalI, a transcription regulator of the maltose system of Escherichia coli and its close homologs from other bacteria. They are members of the LacI-GalR family of repressor proteins which are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	1.22233e-90
NZ_CP045360.1\|WP_152448510.1\|548756_549515_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	3.01202e-98
NZ_CP045360.1\|WP_152448515.1\|553268_554546_-\|hypothetical-protein	gnl\|CDD\|225942	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism].	9.02341e-08
NZ_CP045360.1\|WP_152452301.1\|547947_548757_-\|metal-ABC-transporter-permease	gnl\|CDD\|181938	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB.	7.8073e-73
NZ_CP045360.1\|WP_152448522.1\|560759_561329_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.40921e-14
NZ_CP045360.1\|WP_152455154.1\|545818_547558_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.11225e-44
NZ_CP045360.1\|WP_172976556.1\|544837_545797_-\|HNH-endonuclease	gnl\|CDD\|379157	pfam13391, HNH_2, HNH endonuclease.	1.82748e-13
NZ_CP045360.1\|WP_152448511.1\|549511_550045_-\|transcriptional-repressor	gnl\|CDD\|183251	PRK11639, PRK11639, zinc uptake transcriptional repressor Zur.	1.73676e-30
NZ_CP045360.1\|WP_152448517.1\|555632_556475_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.30982e-53
NZ_CP045360.1\|WP_152448519.1\|557424_558693_-\|extracellular-solute-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	4.25594e-18
NZ_CP045360.1\|WP_152455156.1\|552585_553272_-\|D-lyxose/D-mannose-family-sugar-isomerase	gnl\|CDD\|377827	pfam07385, Lyx_isomer, D-lyxose isomerase. Members of this family of sugar isomerases belong to the cupin superfamily. The enzyme from Cohnella laevoribosii has been shown to be specific for D-lyxose, L-ribose, and D-mannose. E. coli sugar isomerase (EcSI) has been structurally and functionally characterized and shows a preference for D-lyxose and D-mannose.	3.13141e-139
NZ_CP045360.1\|WP_152448513.1\|551292_552582_-\|DUF4147-domain-containing-protein	gnl\|CDD\|225254	COG2379, GckA, Putative glycerate kinase [Carbohydrate transport and metabolism].	1.22627e-165

>NZ_CP045360.1|WP_152448511.1|549511_550045_-|transcriptional-repressor
MTSAAPADPGRPDQEPVGFDDHDHHHCVESGIAAAEAHCREEGLRFTPVRRAALEILLGEHRALGAYELLDKLHAAGFGSQPPVAYRALDFLVAHGFVHKIERLNAFIACAHPGATHSPAFLICRLCDAVAEAQSVPLRGSLGEAAEATGFHIERTVVEALGVCPTCATESPGTAPA
>NZ_CP045360.1|WP_152448510.1|548756_549515_-|ATP-binding-cassette-domain-containing-protein
MSLINVERMSVSYRANTVVRDVSLQVERGEIVTIVGPNGSGKTTLLRAIVGAVAPSSGRITRAPGVVFGYLPQRLHIDPTLPITVERFLRLPGGAGRAEIAAALARSGVSALARRQMSELSGGQLQRVLLARALVAKPDILLLDEPTAGLDQPGSAAFYALIDAVRRETGCAVLMISHELHVVMAASDRVVCLNGHVCCQGTPEHVSSAPEYRALFGTGTHGALALYRHEHDHSHDHSHGKAHAHDSTEAAE
>NZ_CP045360.1|WP_152452301.1|547947_548757_-|metal-ABC-transporter-permease
MLDDFMTRATLAGIGVAVAAAPLGSFVVWRRMAYFGDATAHAAILGVALSLALQMSIFLGAVAVALVMALTVSALSGRGYAMDTLLGVLAHSALAFGLVAVSFLSGIRIDLMAYLFGDILAVSRGDLAVIWAGAGLVAGLIAWRWSALLTATLNEELAYASGIDPKREQLVLTLSLAVTVAVAIKVVGALLIAAMLIIPAAAARPLSRTPEAMALIAAGIGAASAGIGLQAAYILDTPAGPSIVCVAALCFAVTTALRALRGGMASLRR
>NZ_CP045360.1|WP_152455154.1|545818_547558_-|tyrosine-type-recombinase/integrase
MSITKRAGSDNYYVRYTVPLEQRASCGRAEIWRSLRTSDRRLAKRLAPQVLADILEEVAKANLPRAVQQEKRVPTRRELQVAAASVYQMKVEADLDERAHDTDFVRQSYKKGRYKRYARELRKALATGNMNYADADYWADHFAFDLAHDQVLQTEFEQLLTRAELEAAQRWAEHDRGRIGAEASDPLFREPESAHEPHRALPGIISPEDTGKRLTELYKEHERHFRETLKPDTLDQRGKSIELFVDFAGDRPANQFSKAVAREWRNKLRDWPQKAQQRSILKGLSFEEVISKAAELDIPKISDRTIARYLSDVSAFFEWLVYEGYVDRNPCQNLAPRVDRAIQTVHPLSPEQIEILFNSPLFLGCTGQNAKNITNTGRLLISDWRFWLPIMALFSGARQAELAQLDVLDISRADDVDFINISNNGIDADKSLKTSFSKRRIPIHSTLIELGFLDFVDDARSNEQIKLFPELKRDSRGAYSMVSKFFQKYYRNIQLKNNLKQVNFHSLRHNFTDALRDSFAEEQFKPLLGHSGRTTTGGYGEKEALGLPARQRMIETVYYTGFDSSLIPKYRERMRSGYN
>NZ_CP045360.1|WP_172976556.1|544837_545797_-|HNH-endonuclease
MTFGEDRQYGGNVGYEDDLERLYKYDSKVPNHKNVAKGDLIILRGKQSVFGIATIKKIKKNRGLKVLKRCPECGITSIRYRPSKQPKWRCDNGKHEFEEPISTEIEVDLFEAEFGETFSPLNDEITITDLRSITIKRNDQLAIQQLNLQSLEKLIKINPGADRALLCSAASAPVDIDRDEDDFLEFNPSMIDQREKILRAIRTRRGQSKFRKRILNRFDGRCVVSGCMVQELLEAAHIMPYRGEEFNHTSNGLLLRTDLHTLFDLGMLRINPESFEVFIDKNIQDQNYMKFHGIKLDTDRIKATSIEALRVRWEACDAS
>NZ_CP045360.1|WP_152455925.1|543605_544643_-|hypothetical-protein
MLYKSLISTYGASLAAASTPTDDPVWHMCRSQELTLFREYALNALQQAKVYLLDHLAANYADTLHDAIQENAEANGMPAMATLGEVQPPSKITWVEFDYRALAVDRFQRGSLTTVHDKEPIGSGLRGYLIDDRSLNYLRISMFSRPEGSSIMDPICSLLINKKADGRLEYDNLSEDLSRSMVNYYVHIGYPAEKIDTLRVLHRIDTGSDLFIPYAVFAMLASPDLGGIIPSETETFAPKQTKTARKFGKFWVLGAQKSHITIRIGPQAVAHMREREQRLDFERKSQAERQGPVRHWVSEHERHYKNGKVVLVKAHPRGRKSESHLPTRVMGPSLDSPDFILKQKK
>NZ_CP045360.1|WP_152455150.1|542712_543393_+|recombinase-family-protein
MKYVAYYRVSTSRQGRSGLGLEAQKAAVGSFVGERGRVVASFVETESGKSDNRPELAAAISAAKKCGAVLLIAKIDRLARNVAFIANLLEAGVEVTAADMPEANRFVLHIMAAVAEHEGRAISERTKAALKAAKARGQNLGWSMPSRKKEQLAASSAGRWTQQKQADAHARIFGPMIEDMRRAGKSFRAIALEMNGLGYTSSRKGKWHASSIRNTLRRSEFLCSAK
>NZ_CP045360.1|WP_152455148.1|541881_542490_-|hypothetical-protein
MPDHLKTISLNRQRANQLKELADAENTTPAKLIEEWTRKARWKLLMSSLDIEHPRSVESSSTDQSRDGLSMKLLETMNKSQLEKSIKTLTPPDWKVSVCCGSDGSGGWVEVRHEKEGVSLSLTSQQARKLGEYLEEMSGNYSGGVKQVPIENGIIQIRRGGRSLRISFELGSEEAPSAASLSNPLGGELGLSLRCAAQHLLL
>NZ_CP045360.1|WP_152455146.1|540204_540816_+|hypothetical-protein
MNEKSFKPDPIAGEHFSKIVSVMSSAYKRHGYILERALLEQLKTNDSFEVWEDRLFQVPGTADHIVDSAIKNPEHIFGSETGYREGHRTLQVDAIVYNKNDKSLKAYEIKRGSGLHDAGKRRSILRDLLCLQVLLRSYGESKGLDVTSARAHIIFYYGKCSIKKPFSLTKDELDEHFGFPVVGAVEEVNSYFRERLFGILAGS
>NZ_CP045360.1|WP_172976555.1|538158_539340_+|hypothetical-protein
MAYLPYRPYPVWVCRVSGNDYLLRFWGLKLPTPTLEDWEVSLIKAMLARKFQNNTIQFYFNRPDRAVNSGRISEIKSGDRWADVPPADNHDLDEFLDHHPYTQNYRLENEPDMPVQKSAASQFRFEDDGLISLDKKSLTDELSDDDPAIDAFNELSTKIAGMLSVGSNHLGPLEEKISAFNEAVSAGLAEAHVVKVWMRGNALRQDLRAHRLVEGSDEFHPAKLDPICASHLADIVEAFNVLAALTPRIAELDHASLGPGVPEIRKALSEFEPLLPDALAISTEDAASELRVEVAEFDSEGEEAARQANVAGGTVFNFVLTAIKGVYREVRKQLGEHANELWNGVRLAVGIKVGSIAWEFLSTNFPVIRSVIEQLASNPAVLKILDLLRDLLA
>NZ_CP045360.1|WP_152448513.1|551292_552582_-|DUF4147-domain-containing-protein
MSDRPFDPRDLLTRLFRRAVAVADPMQVVPTHLPDRPAGRFVVIGAGKASARMAEAVEDALGPCEGLVITRYGYGRPTRGIEIVEAAHPVPDQAGVAATARMLDLLSGLGADDTVLALISGGGSALLCAPAHGLSLEDKRAVNAALLASGAPIGAMNVVRKHLSRVKGGQLAAACHPAQLVSLLISDVPGDDPAEIASGPTVGERSTPQDALEILARYAVDVPDAAGRVLNAGSGVVAPEDSRLARAETQIVAAPSQSLDAAAEDAKSHGIDVRILGDAIEGEARVVAAEQAQMALALREEARDRGMPILLLSGGECTVTRRGNGVGGPNAEFTLAAALALNGARGIHVLACDTDGVDGAAEVAGAYAGPETLNAARARGLDPQAALDDNDAHGFFGAIDGQIVTGPTLTNVNDFRAILVMPPELDGQP
>NZ_CP045360.1|WP_152455156.1|552585_553272_-|D-lyxose/D-mannose-family-sugar-isomerase
MKRSEINEILRAADDMIRRHGFTLPPFAYWSPGTFRDQAATARHVIEARCGWDITDYGAGRFDEMGLFLFTLRNGRLADLTAGRGMCYAEKLLISRQDQLSPMHTHVIKAEDIINRGGATLIIELYGSEENGGFAGDRGGQVMCDGILRDYGPGEKLHLAPGESVTLMPGDWHAFWGEGGDVLVGEVSTVNDDETDNIFREPIGRFATIEEDTDPVHLLVSDYATWLA
>NZ_CP045360.1|WP_152448515.1|553268_554546_-|hypothetical-protein
MSDTRIEKAFAILRENDRGTYTVPTKGLYPFQWNWDSCLTALGFGHFDEARAWTEIDTLFAHQWEDGMVPHIVFHKEDDGYFPGPSVWQTGREVPTSGITQPAVAGFALNRLFERACDTDLARDRACALLPKVAAWHEWFYRCRDPQGTGLVAIIHPWESGRDNSVDWDAALGRVPTEGVAPFTRRDTQHANPEHRPTQAQYEAYIALVQHFRDLDWDNSVLHDASPFRVVDPGFNAILIRSCSDLARLAEALGETRIAERSRTLAERGIAALETLWSDTHGQYLCFDRAVGKRVESPSVGGLLPVFAAVPKARATAIARRIDDIGTKARFMVPSHDPASPDYDGKRYWRGPLWLIVNYMIADGLKAAGEASVVDRIVTDSLNLIEQSGFAEYYDPKSGEPCGGGRFTWTAAMVIEFLTGAKEDA
>NZ_CP045360.1|WP_152448516.1|554555_555599_-|ATP-binding-cassette-domain-containing-protein
MAEIQIKNVAKRFGAYQALHDINLTISDREFMVLLGASGCGKTTLLRIVAGLETATTGEVWIGGRRVDHLPPKDRGIAMVFQNYAVFPHLTVFENIGFGLRMQKLPDAEVKKRVERCASLMHIEQLLKRYSGELSGGQRQRVAVARALAMEPDVILMDEPLSNLDALLRLEMRAELKGVLAESKTTAIYVTHDQVEAMSLADRISVMHQGKIIQAATPIEVYRNPAAEFVAGFIGNPPMNFLRAENAGSGKWRVGGETVDGPAAANGPLQYAIRPEDMHLADRGLPATVKLVEPLGAHLLVTCDVGGTSIRAVLDSDLTLKPGDAIHLAPMPERVRWFDPETTKAVA
>NZ_CP045360.1|WP_152448517.1|555632_556475_-|ABC-transporter-permease-subunit
MTDATIDVPAAAGTRKAGNTLYIASVALLIAWVLVPLYFLLVNTLSSPETVNSFPKPFLPEFDLGSLQFFAGFQGMLSALKNSVLVAVLTMILSIAIGAPAGYALSRFDFRGKEVFRLLILLTRAFPLPLLALPLAVLFIRTGLDDTAFGLALVHTTLAIPFAVLITFSLFSGIPVELEEAAWTLGCTRFTAFTKVVLPLILPGITASAIFAFVISWNEVFAAAVLTIENRTLPAFLLQTLAESPMHLKFAGGFILVVPALIFIFAVRKYLFAMWGIANR
>NZ_CP045360.1|WP_152448518.1|556471_557317_-|ABC-transporter-permease-subunit
MDARLLPYLLILPVTLFLGVFFLYPFFLVAQQAFTTGAGFTLDNFRDVVSYWKFPISLKNTFLLALCVVPIQLALSLLMATMVSRMEKGRDLVLYVWTIPLGISDLAAGIIWLAIFEQSGFLNSMMTGLGLADQPVNFLSYQNPLMVFVAIMLAEIWRATAIMLVIIVAGIGLIPKEYYEAAEVFGASPWQRFLRVTLPLLRPSLQTALILRVVLAFEVFAVVAALGGTLFPVLMGEIYAYQFDLQNGGAAAALALIVLAISLAFTLIILRALRVPKGATI
>NZ_CP045360.1|WP_152448519.1|557424_558693_-|extracellular-solute-binding-protein
MNLKSKLAFAASGIALLCSVSAAQAEVLFWSTQARPAEEAQAMRQQVLSGFGPGVDYQPNEEGPWLTRLQAEGQAGSGSIGVLGALHGNFSAIDPETLVDLDGFDAAISSETFASLAKLGTDTMQYMPWMQASYIMAANKEALEYLPDGADIDALTYDQLIAWAANVHEAEGSPKFGFPAGPKGLKHRFFQGYLYPSYTNGVVRTFASAEAVTAWEKFRELWEHTNPASTNFAFMQEQLLSGDAWIVFDHTSRLAQAFNERPDDFVAFPAPAGPAGRGFMPVLAGVAIPETAPDKDEARALVEYMLTPEAQIATLRATSFFPVIDVDLPDDLPPAVKAAGDAVAKMSSAEDANPGLLPSGLGEKSGDFSRVYNDTFERIILAGQPIEQVLEDQKATLQRIMDETGAPCWAPDAPSEGACPVE
>NZ_CP045360.1|WP_152448520.1|558974_559982_+|substrate-binding-domain-containing-protein
MKTKPTLGTVAKEAGVSIPTVSQVMRGTGRISEETRARVMRAAKKLHYVPDSRAASMRSGERREIGFVLNNFANPFNAEVVSGAVDLLENEGYLVSLLDGQDDPERQFRHIEVFIKHGRGGLMWVPAFNTPPETSDLLAAHGIPTVAFLRPASDRFDYVGIRNAEATSEATRHLADLGHSRIAYLGGTDMSFVRERRIEGFKRTMAQFGLGAPLVWPCQDGRREGMEAMQALCAAHPDVTAVVCNGDMVALGACIALMKAGRTPGHDVSVVGFDDIDDAALAIPPLTTMAVCPKRLGMKLASVLLDRIRDPDAPASITEVSATLTVRETTGAPAT
>NZ_CP045360.1|WP_152448521.1|560049_560643_-|TetR-family-transcriptional-regulator
MGRSATYDKDKVLKAAMDLFWARGYHTTSLKDLERVLDMRPGSIYAAFGSKEALFRAALDRYSTAGLTALEEALAQSGSPIAGLAAHVRMFGGIARDALPSRACMLVKTLLETPDDEPELRRSVEDMMRQTERAFAAAFRSARDAGEIAPDADPDQLAARLQAAIFGLRAYAQRTDADDRVARIAEEIAKDVEALRI
>NZ_CP045360.1|WP_152448522.1|560759_561329_+|carboxymuconolactone-decarboxylase-family-protein
MTDFTKHTMDTAPEESRPLLENSQKAFGRLPGLHAVMAEAPALLEGYQKLHKLFAEETSFDKDELTVVWQAINVEHSCRYCVPAHTGIAKMMKVDDAITDALRNETPLPNERLEALRTFTLSVVRDRGNVDDAAVAAFLDAGFTKRQVLEVILGVSQKVMSNYTNHLAQTPVDEPMKAFAWEKPRKDAA

You can click texts colored in the table to view more detailed information

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

423123 : 484339

Mycobacterium_phage(15.38%)

transposase,tRNA,integrase

attL 421970:422007|attR 484427:484464

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
421970:422007	attL	NA	NA	NA	NA
WP_152455049.1\|423123_424231_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.1e-53	42.4
WP_152455051.1\|424625_425507_+	hypothetical protein	NA	NA	NA	NA
WP_152455053.1\|425952_426156_+	hypothetical protein	NA	NA	NA	NA
WP_152455055.1\|428469_428859_-	hypothetical protein	NA	NA	NA	NA
WP_152455057.1\|429721_430924_-	permease	NA	NA	NA	NA
WP_152455059.1\|430949_431354_-	hypothetical protein	NA	NA	NA	NA
WP_152455061.1\|431372_432254_-	CopD family protein	NA	NA	NA	NA
WP_172976548.1\|432255_432528_-	copper resistance protein CopC	NA	NA	NA	NA
WP_152455065.1\|432634_433111_-	c-type cytochrome	NA	NA	NA	NA
WP_152455067.1\|433662_433983_-	hypothetical protein	NA	NA	NA	NA
WP_172976549.1\|434025_434583_-	hypothetical protein	NA	NA	NA	NA
WP_172976550.1\|434656_435190_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_152455919.1\|435869_436943_-	tricarballylate utilization 4Fe-4S protein TcuB	NA	NA	NA	NA
WP_152455072.1\|436932_438324_-	FAD-dependent tricarballylate dehydrogenase TcuA	NA	NA	NA	NA
WP_152455074.1\|438320_438992_-	FCD domain-containing protein	NA	NA	NA	NA
WP_152455076.1\|439066_440122_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_172976551.1\|440154_440316_-	hypothetical protein	NA	NA	NA	NA
WP_152455078.1\|440327_441137_-	universal stress protein	NA	NA	NA	NA
WP_152455081.1\|441141_442227_-	4-oxalomesaconate tautomerase	NA	NA	NA	NA
WP_152455083.1\|442238_444269_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_152449679.1\|444347_445424_-	tricarboxylate transporter	NA	NA	NA	NA
WP_152449680.1\|445570_446242_+	response regulator	W8CYM9	Bacillus_phage	1.4e-27	33.5
WP_152455085.1\|446238_447591_+	sensor histidine kinase N-terminal domain-containing protein	NA	NA	NA	NA
WP_152455087.1\|448877_450608_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-18	31.1
WP_152455088.1\|450604_451546_-	acetamidase/formamidase family protein	NA	NA	NA	NA
WP_152455090.1\|451547_453173_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_093015943.1\|453195_454116_-	ABC transporter permease	NA	NA	NA	NA
WP_152455092.1\|454115_455018_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_152455094.1\|455014_455590_-	transcriptional antiterminator	NA	NA	NA	NA
WP_152455096.1\|455586_456690_-	transporter substrate-binding protein	NA	NA	NA	NA
WP_152455098.1\|457675_457897_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.9e-15	53.4
WP_152455100.1\|457901_458330_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J6X7	uncultured_Caudovirales_phage	6.1e-13	38.2
WP_152455101.1\|458311_460444_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.1e-207	50.5
WP_152455103.1\|460451_461435_+	class 1b ribonucleoside-diphosphate reductase subunit beta	B5LJM6	Mycobacterium_phage	2.0e-128	67.3
WP_172976552.1\|461446_461815_+	hypothetical protein	NA	NA	NA	NA
WP_093015712.1\|461855_463115_-	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA
WP_152455921.1\|463152_463959_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_093015710.1\|463994_465524_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.7e-28	23.2
WP_152455105.1\|465516_466023_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	1.4e-16	41.2
WP_152455107.1\|466010_466838_-	FAD binding domain-containing protein	NA	NA	NA	NA
WP_152455109.1\|466834_469819_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_152455111.1\|469934_470789_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152455113.1\|471257_471890_-\|integrase	tyrosine-type recombinase/integrase	A0A0A8WF93	Clostridium_phage	8.7e-08	27.8
WP_152455115.1\|472308_472764_-	hypothetical protein	NA	NA	NA	NA
WP_152449695.1\|472780_473746_-	PQQ-dependent catabolism-associated beta-propeller protein	NA	NA	NA	NA
WP_152455117.1\|473826_474981_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_152455120.1\|475795_476797_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_172976553.1\|477744_478041_+\|transposase	transposase	NA	NA	NA	NA
WP_152455124.1\|478233_479595_+\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	3.4e-110	47.3
WP_152455126.1\|479633_480308_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.4e-08	35.2
WP_152455128.1\|480532_481081_+	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	1.8e-38	45.0
WP_152455130.1\|482005_482197_+	hypothetical protein	NA	NA	NA	NA
WP_152455132.1\|482226_482571_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_152455134.1\|482664_482820_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_152455136.1\|483107_483317_+	hypothetical protein	NA	NA	NA	NA
WP_152455138.1\|483310_484339_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
484427:484464	attR	NA	NA	NA	NA

DBSCAN-SWA_2

855762 : 899593

Paracoccus_phage(25.0%)

portal,capsid,protease,head,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152448791.1\|855762_857712_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	9.2e-117	35.5
WP_152448792.1\|857849_859115_+	MFS transporter	NA	NA	NA	NA
WP_152448793.1\|859214_859967_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_152448794.1\|859909_860950_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_152448795.1\|860987_861983_+	ester cyclase	NA	NA	NA	NA
WP_152448796.1\|862139_863306_+	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_152448797.1\|863348_864458_+	glycosyltransferase	NA	NA	NA	NA
WP_152448798.1\|864454_865858_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_152448799.1\|865861_866116_+	DUF2484 family protein	NA	NA	NA	NA
WP_152448800.1\|866112_866367_+	DUF2484 family protein	NA	NA	NA	NA
WP_152448801.1\|866461_867409_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_172975619.1\|867481_868393_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_152448803.1\|868380_869247_+	cell division protein FtsQ	NA	NA	NA	NA
WP_152448804.1\|869251_870586_+	cell division protein FtsA	NA	NA	NA	NA
WP_152448805.1\|870758_872414_+	cell division protein FtsZ	NA	NA	NA	NA
WP_152448806.1\|872622_873543_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_152448807.1\|873677_874565_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_152448808.1\|874617_876264_+	DNA repair protein RecN	NA	NA	NA	NA
WP_152452339.1\|876487_878101_+	chloride channel protein	NA	NA	NA	NA
WP_152448809.1\|878239_878584_-	DUF427 domain-containing protein	NA	NA	NA	NA
WP_152448810.1\|878660_880460_-	M24 family metallopeptidase	A0A0P0I8D7	Acinetobacter_phage	1.2e-94	37.0
WP_152448811.1\|880595_882470_-	cobaltochelatase subunit CobT	J9Q7G6	Salmonella_phage	4.4e-15	28.0
WP_152448812.1\|882766_883591_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_152448813.1\|883680_885465_+	SLC13 family permease	NA	NA	NA	NA
WP_152448814.1\|885538_886000_+	hypothetical protein	NA	NA	NA	NA
WP_152448815.1\|885899_887261_+	ATP-binding protein	A0A0K1LMR9	Caulobacter_phage	2.3e-74	41.1
WP_152448816.1\|887430_888618_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	2.8e-60	38.0
WP_152448817.1\|888610_888838_+	hypothetical protein	NA	NA	NA	NA
WP_152448818.1\|888862_889405_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	4.3e-32	50.0
WP_152448819.1\|889438_890620_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.8e-62	38.5
WP_152448820.1\|890710_891304_+	hypothetical protein	NA	NA	NA	NA
WP_152448821.1\|891300_891639_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_152448822.1\|891635_892043_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_152448823.1\|892066_892486_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_152448824.1\|892490_892811_+	gene transfer agent family protein	NA	NA	NA	NA
WP_152448825.1\|892807_893014_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_152448826.1\|893010_893673_+\|tail	phage tail tape measure protein	D6PFD6	uncultured_phage	4.7e-12	33.2
WP_152448827.1\|893719_894352_+	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	6.5e-56	49.0
WP_152448828.1\|894348_895236_+	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	5.4e-64	44.7
WP_152448829.1\|895232_895673_+	C40 family peptidase	F4YXU4	Roseobacter_phage	5.8e-27	43.3
WP_152448830.1\|895684_899593_+	glycoside hydrolase TIM-barrel-like domain-containing protein	A0A0B5A7K5	Paracoccus_phage	3.0e-231	37.7

DBSCAN-SWA_3

1831571 : 1887198

Bacillus_phage(30.0%)

portal,capsid,transposase,protease,head,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152449621.1\|1831571_1832933_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_172975670.1\|1833045_1834044_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_152449623.1\|1834280_1835081_+	autoinducer binding domain-containing protein	NA	NA	NA	NA
WP_152449624.1\|1835483_1836362_-	elongation factor Ts	NA	NA	NA	NA
WP_152449625.1\|1836467_1837247_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_152449626.1\|1837683_1838895_+	hypothetical protein	NA	NA	NA	NA
WP_152449627.1\|1838891_1839185_+	hypothetical protein	NA	NA	NA	NA
WP_152449628.1\|1839159_1840008_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_152455375.1\|1840026_1841328_-	HupE/UreJ family protein	NA	NA	NA	NA
WP_152449630.1\|1841476_1842370_+	kinase	NA	NA	NA	NA
WP_152449631.1\|1842366_1843281_+	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA
WP_152449632.1\|1843374_1844076_+	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	1.9e-11	26.9
WP_152449633.1\|1844224_1845256_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_152449634.1\|1845320_1846010_-	phosphate regulon transcriptional regulator PhoB	W8CYM9	Bacillus_phage	7.2e-40	38.6
WP_152449635.1\|1846016_1846751_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_152449636.1\|1846754_1847555_-	phosphate ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_152449637.1\|1847566_1848928_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_152449638.1\|1848924_1850406_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_152449639.1\|1850521_1851547_-	substrate-binding domain-containing protein	A0A1B1IWY0	uncultured_Mediterranean_phage	6.4e-61	38.3
WP_152449640.1\|1851826_1852510_+	hemolysin III family protein	NA	NA	NA	NA
WP_152449641.1\|1852545_1853034_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_152449642.1\|1853102_1854119_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	5.8e-30	30.3
WP_152452487.1\|1854123_1855290_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A2I2L687	Orpheovirus	1.4e-06	24.5
WP_152449643.1\|1855410_1855932_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_152449644.1\|1855928_1856576_-	guanylate kinase	A0A223FN12	Murmansk_poxvirus	8.6e-19	33.0
WP_152449645.1\|1856581_1857472_-	YicC family protein	NA	NA	NA	NA
WP_172975671.1\|1857713_1858343_+	PAS domain-containing protein	NA	NA	NA	NA
WP_152455376.1\|1858455_1859376_-	NTP transferase domain-containing protein	A0A127AW70	Bacillus_phage	5.1e-49	43.3
WP_152449648.1\|1859780_1860938_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_152449649.1\|1860934_1861711_+	HAD hydrolase family protein	NA	NA	NA	NA
WP_152449650.1\|1861711_1863196_+	glucosylglycerol-phosphate synthase	NA	NA	NA	NA
WP_152449651.1\|1863295_1864489_+	MFS transporter	NA	NA	NA	NA
WP_152449652.1\|1864572_1865940_-	3-deoxy-7-phosphoheptulonate synthase class II	NA	NA	NA	NA
WP_152449653.1\|1866185_1867187_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152449654.1\|1867382_1868579_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_152449655.1\|1868690_1869470_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	1.8e-10	24.5
WP_152449656.1\|1869466_1870288_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-14	25.1
WP_152449657.1\|1870308_1870794_+	hypothetical protein	NA	NA	NA	NA
WP_152449658.1\|1870793_1871804_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_172975672.1\|1871800_1873099_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_152449659.1\|1873192_1873894_+	response regulator	NA	NA	NA	NA
WP_172975673.1\|1873923_1875114_+	FIST C-terminal domain-containing protein	NA	NA	NA	NA
WP_152449660.1\|1875110_1877327_+	PAS-domain containing protein	NA	NA	NA	NA
WP_152455378.1\|1877388_1877676_-	hypothetical protein	NA	NA	NA	NA
WP_152455380.1\|1877860_1879147_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_152449663.1\|1879202_1880123_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_152455382.1\|1880377_1881397_-	hypothetical protein	NA	NA	NA	NA
WP_152455384.1\|1881493_1882555_-\|portal	phage portal protein	NA	NA	NA	NA
WP_152455386.1\|1882557_1883097_-	hypothetical protein	NA	NA	NA	NA
WP_152455388.1\|1883096_1883720_-\|head,protease	HK97 family phage prohead protease	NA	NA	NA	NA
WP_152455390.1\|1883719_1884991_-\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_152455393.1\|1884983_1885349_-	HNH endonuclease	A0A1W6JQ75	Staphylococcus_phage	1.7e-08	39.7
WP_172976564.1\|1885411_1885687_+	hypothetical protein	NA	NA	NA	NA
WP_172976565.1\|1885683_1887198_-\|terminase	terminase	NA	NA	NA	NA

DBSCAN-SWA_4

2735245 : 2747490

Bacillus_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172975724.1\|2735245_2735746_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-12	37.3
WP_152452583.1\|2736219_2736780_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.4e-39	45.4
WP_152450371.1\|2736784_2737882_+	acyltransferase family protein	A0A166XZF2	Gordonia_phage	1.6e-17	31.7
WP_152450373.1\|2738045_2740034_+	acyltransferase family protein	B5WZU0	Pseudomonas_phage	1.7e-62	37.0
WP_152450375.1\|2740266_2741859_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	1.2e-21	30.6
WP_152455654.1\|2742216_2743218_+	response regulator	W8CYM9	Bacillus_phage	3.2e-12	38.8
WP_152450379.1\|2743409_2744231_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.7e-46	41.1
WP_152450381.1\|2744227_2745019_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_172975725.1\|2745015_2745975_-	KpsF/GutQ family sugar-phosphate isomerase	A0A0A0Q3B9	Pectobacterium_bacteriophage	3.9e-20	35.1
WP_152452585.1\|2746176_2747490_+	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	2.3e-87	42.8

DBSCAN-SWA_5

2957040 : 3008837

Rhodovulum_phage(15.38%)

capsid,portal,transposase,head,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152450708.1\|2957040_2957535_+\|transposase	transposase	NA	NA	NA	NA
WP_152450709.1\|2957820_2958519_+	DUF1194 domain-containing protein	NA	NA	NA	NA
WP_152452609.1\|2958559_2959243_+	hypothetical protein	NA	NA	NA	NA
WP_152450711.1\|2959273_2959684_-	c-type cytochrome	NA	NA	NA	NA
WP_152450713.1\|2959865_2960063_-	CsbD family protein	NA	NA	NA	NA
WP_152450714.1\|2960153_2960633_-	hypothetical protein	NA	NA	NA	NA
WP_172976581.1\|2960632_2961352_-	DUF4444 domain-containing protein	NA	NA	NA	NA
WP_152450717.1\|2961344_2962412_-	P-loop NTPase	NA	NA	NA	NA
WP_152450719.1\|2962420_2962609_-	hypothetical protein	NA	NA	NA	NA
WP_152450721.1\|2962697_2963432_+	hypothetical protein	NA	NA	NA	NA
WP_152452611.1\|2963574_2965539_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_152452613.1\|2965727_2966267_+	DUF3305 domain-containing protein	NA	NA	NA	NA
WP_152450723.1\|2966263_2966995_+	DUF3306 domain-containing protein	NA	NA	NA	NA
WP_152450724.1\|2966991_2967603_+	molecular chaperone TorD family protein	NA	NA	NA	NA
WP_152450726.1\|2967727_2967922_+	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA
WP_152450728.1\|2968020_2970996_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_152450730.1\|2971011_2971605_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_152450732.1\|2971790_2973029_+	formate dehydrogenase subunit gamma	NA	NA	NA	NA
WP_152450734.1\|2973036_2974335_+	c-type cytochrome	NA	NA	NA	NA
WP_172975734.1\|2974331_2974499_+	hypothetical protein	NA	NA	NA	NA
WP_152450736.1\|2974518_2975775_-	MFS transporter	NA	NA	NA	NA
WP_172976582.1\|2976151_2976877_+	hypothetical protein	NA	NA	NA	NA
WP_152455692.1\|2977098_2978691_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	3.1e-22	31.4
WP_152455694.1\|2979252_2979576_+	hypothetical protein	NA	NA	NA	NA
WP_152455696.1\|2979608_2979821_-	hypothetical protein	NA	NA	NA	NA
WP_152455698.1\|2979817_2980348_-	hypothetical protein	NA	NA	NA	NA
WP_152455700.1\|2981052_2981292_-	hypothetical protein	NA	NA	NA	NA
WP_152455702.1\|2981397_2982105_-	peptidoglycan-binding protein	A0A0B5A5A2	Paracoccus_phage	9.0e-38	50.0
WP_152455704.1\|2982172_2982832_-	hypothetical protein	NA	NA	NA	NA
WP_152455706.1\|2982828_2983272_-	hypothetical protein	NA	NA	NA	NA
WP_172976583.1\|2983447_2983627_-	hypothetical protein	NA	NA	NA	NA
WP_152455710.1\|2983638_2984121_-	hypothetical protein	NA	NA	NA	NA
WP_152455712.1\|2984117_2984492_-	hypothetical protein	NA	NA	NA	NA
WP_152455714.1\|2984495_2993162_-	hypothetical protein	A0A1B1P733	Rhodovulum_phage	3.0e-02	37.3
WP_152455715.1\|2993154_2993544_-	C40 family peptidase	A0A1B1P726	Rhodovulum_phage	3.0e-27	49.6
WP_152455717.1\|2993549_2994011_-	hypothetical protein	NA	NA	NA	NA
WP_152455719.1\|2994074_2994434_-	hypothetical protein	NA	NA	NA	NA
WP_152455721.1\|2994436_2998438_-\|tail	phage tail tape measure protein	G8DCS3	Silicibacter_phage	6.0e-38	28.8
WP_152450776.1\|2998434_2998746_-	hypothetical protein	NA	NA	NA	NA
WP_152455723.1\|2998742_2999192_-	hypothetical protein	NA	NA	NA	NA
WP_152450780.1\|2999205_3000180_-	hypothetical protein	NA	NA	NA	NA
WP_152455725.1\|3000179_3000617_-	hypothetical protein	G8DH50	Emiliania_huxleyi_virus	6.6e-07	32.8
WP_152455727.1\|3000616_3001273_-	hypothetical protein	G8DH49	Emiliania_huxleyi_virus	1.5e-26	42.0
WP_152455729.1\|3001272_3001578_-	hypothetical protein	NA	NA	NA	NA
WP_152455731.1\|3001580_3001943_-	hypothetical protein	NA	NA	NA	NA
WP_152455733.1\|3002035_3003070_-\|capsid	major capsid protein	D4HTU6	Vibrio_phage	1.1e-39	32.4
WP_152455735.1\|3003152_3003527_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	6.3e-06	37.0
WP_152455737.1\|3003589_3004969_-	S49 family peptidase	A0A068CE01	Rhizobium_phage	1.3e-64	48.5
WP_152455739.1\|3004973_3006578_-\|portal	phage portal protein	V5Q9Y6	Xylella_phage	5.3e-86	37.9
WP_152455741.1\|3006577_3006793_-	hypothetical protein	A0A1V0DX17	Synechococcus_virus	1.0e-05	43.8
WP_152455743.1\|3006785_3008837_-\|terminase	phage terminase large subunit family protein	A0A291AUK9	Sinorhizobium_phage	2.2e-121	36.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045362

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23654 : 67569

Bacillus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152456130.1\|23654_24248_+\|transposase	transposase	NA	NA	NA	NA
WP_152456132.1\|24234_26568_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_152456134.1\|26576_28580_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_152456136.1\|28727_30113_+\|transposase	transposase	NA	NA	NA	NA
WP_152456138.1\|30330_31008_-	ZinT/AdcA family metal-binding protein	NA	NA	NA	NA
WP_093014998.1\|32988_33372_-\|transposase	transposase	NA	NA	NA	NA
WP_172976602.1\|33502_33649_-	hypothetical protein	NA	NA	NA	NA
WP_152456140.1\|33993_35574_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	2.2e-12	25.2
WP_152456142.1\|39170_40166_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	2.6e-83	53.7
WP_152456144.1\|40162_40435_+	hypothetical protein	NA	NA	NA	NA
WP_152456146.1\|40566_41394_-	DUF481 domain-containing protein	NA	NA	NA	NA
WP_152456148.1\|41683_42634_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_152456150.1\|42752_43928_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_152456152.1\|44083_44539_+	hypothetical protein	NA	NA	NA	NA
WP_172976603.1\|44569_45160_+	cell wall hydrolase	A0A1B0UXM4	Roseobacter_phage	8.6e-26	48.4
WP_152456156.1\|45226_46216_+	YihY family inner membrane protein	NA	NA	NA	NA
WP_152456158.1\|46397_46799_-	VOC family protein	NA	NA	NA	NA
WP_152463806.1\|47118_47433_-	hypothetical protein	NA	NA	NA	NA
WP_152456160.1\|47987_49067_-	type IV secretion system protein	NA	NA	NA	NA
WP_152456162.1\|49073_49478_-	hypothetical protein	NA	NA	NA	NA
WP_152456164.1\|49474_49663_-	hypothetical protein	NA	NA	NA	NA
WP_152456166.1\|49659_50646_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_152456168.1\|50650_52030_-	conjugal transfer protein	NA	NA	NA	NA
WP_152456170.1\|52026_52722_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_152456172.1\|52723_53377_-	type IV secretion system protein	NA	NA	NA	NA
WP_152456174.1\|53393_54203_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_152456200.1\|54202_55291_-	transglycosylase SLT domain-containing protein	A0A1P8CWQ1	Bacillus_phage	1.1e-26	56.8
WP_172975068.1\|55346_55514_-	hypothetical protein	NA	NA	NA	NA
WP_152456176.1\|55510_57886_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
WP_012187324.1\|57875_58154_-	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_035252599.1\|58146_58440_-	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_152456178.1\|58436_59057_-	transglycosylase SLT domain-containing protein	A0A1P8CWQ1	Bacillus_phage	3.7e-19	53.5
WP_152456180.1\|59100_59454_-	hypothetical protein	NA	NA	NA	NA
WP_152456182.1\|59665_59917_+	hypothetical protein	NA	NA	NA	NA
WP_152456184.1\|60041_60299_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152456186.1\|60466_60694_+	hypothetical protein	NA	NA	NA	NA
WP_152456188.1\|60847_61720_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_152456190.1\|61880_62600_+	hypothetical protein	NA	NA	NA	NA
WP_172975069.1\|62948_63710_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_172975070.1\|63893_64589_-	hypothetical protein	NA	NA	NA	NA
WP_172975670.1\|64677_65676_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	8.0e-24	27.9
WP_152456194.1\|66379_67569_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.7e-44	38.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045360

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045362

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection