CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP035204	Klebsiella pneumoniae strain LH94 plasmid pLH94-8, complete sequence	0 crisprs	NA	0	2
NZ_CP035206	Klebsiella pneumoniae strain LH94 plasmid pLH94-2, complete sequence	0 crisprs	NA	0	0
NZ_CP035202	Klebsiella pneumoniae strain LH94 chromosome, complete genome	3 crisprs	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,DEDDh,RT,WYL,DinG	10	7
NZ_CP035203	Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence	0 crisprs	cas3,csa3	0	2
NZ_CP035205	Klebsiella pneumoniae strain LH94 plasmid pLH94-3, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

57 : 37074

Salmonella_phage(25.0%)

integrase,transposase

attL 7106:7165|attR 32251:33072

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039026396.1\|57_372_+\|transposase	transposase	NA	NA	NA	NA
WP_039026397.1\|368_1190_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.5e-09	28.7
WP_063102497.1\|1714_2101_-	bleomycin binding protein	NA	NA	NA	NA
WP_152650725.1\|6096_6753_+	QnrS family quinolone resistance pentapeptide repeat protein	NA	NA	NA	NA
WP_152650726.1\|6765_7122_+	hypothetical protein	NA	NA	NA	NA
7106:7165	attL	NA	NA	NA	NA
WP_001067855.1\|7168_7873_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011264039.1\|7945_8185_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_000612791.1\|8330_9194_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_001354008.1\|9231_9477_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|9945_10737_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_104772209.1\|11591_11855_-	hypothetical protein	NA	NA	NA	NA
WP_000800531.1\|11916_12249_-	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
WP_001206316.1\|12418_13210_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000095725.1\|13302_14562_-	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
WP_001206356.1\|14823_15615_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_001336345.1\|15620_15911_-	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001083725.1\|16022_16520_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_000845048.1\|16667_17681_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000454193.1\|17883_18234_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000147567.1\|18359_18920_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_015344976.1\|18922_21874_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.5
WP_046788546.1\|21882_22284_+	hypothetical protein	NA	NA	NA	NA
WP_001067784.1\|22368_23073_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_074180790.1\|23130_23967_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001447541.1\|23997_24882_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214122.1\|25098_26313_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001255015.1\|26340_26646_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015344975.1\|26757_28251_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001445143.1\|28281_28533_+	hypothetical protein	NA	NA	NA	NA
WP_000251875.1\|28426_28729_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001043260.1\|28815_29631_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_085940648.1\|29720_30810_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_072202717.1\|31007_31487_-	phenol hydroxylase	NA	NA	NA	NA
WP_001067855.1\|31542_32247_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_016338361.1\|34127_35051_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.2e-172	96.7
32251:33072	attR	NA	NA	NA	NA
WP_001039464.1\|35190_35577_-	hypothetical protein	NA	NA	NA	NA
WP_012695466.1\|36150_37074_+\|transposase	IS5-like element IS903B family transposase	Q1MVF0	Enterobacteria_phage	4.6e-175	98.7

DBSCAN-SWA_2

111257 : 118268

Escherichia_phage(50.0%)

integrase

attL 113141:113153|attR 119861:119873

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001568038.1\|111257_112229_-	hypothetical protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_001568036.1\|112462_112894_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
WP_004197646.1\|112893_114165_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.2e-153	64.0
113141:113153	attL	NA	NA	NA	NA
WP_004098982.1\|114576_115452_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
WP_004197649.1\|116108_116735_+	ParA family plasmid-partitioning AAA ATPase	A0A222YXS3	Escherichia_phage	2.9e-40	43.6
WP_077253981.1\|116854_117034_+	Par-like protein	NA	NA	NA	NA
WP_004197635.1\|117473_118268_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
119861:119873	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP035202

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP035202_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035202_1

196121-197797

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

27 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP035202_1

>merge|NZ_CP035202|1|196121-197797|CRISPRCasFinder,CRT,PILER-CR
GGGCTTATCCTCGCGAATGCGGGGAACACTTCATGGCCCGAGCCAGTTCGGTGATATCAGTCGGTTTATCCCCGCTGGCGCGGGGAACACCACACACGATTATTACAACGTCAATTAGAATCCGGTTTATCCCCGCTGGCGCGGGGAACACCACGTATGCAGAACTCGCGGAGGAAGAAGAGCCGGTTTATCCCCGCTGGCGCGGGGAACACAATTTCTGTTCCATGTCATTAACTCCCATAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGAAATCCACGGTAAAAAAATCAGAATTTCCGGTTTATCCCCGCTGGCGCGGGGAACACTATTTCAGAGCACCACCCGAGGCGATTTGTAACGGTTTATCCCCGCTGGCGCGGGGAACACTCCGCCATCTGGCGAAGGATACGGCGACCCTGCGGTTTATCCCCGCTGGCGCGGGGAACACCCGCGCAGGTTAGACGGGTTAGACGACAACGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCTGCTTTTTTCCTGCCTGACCACTGACCGGCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAGATACCAGCAGACAACCACCGACAATCGCGGTTTATCCCCGCTGGCGCGGGGAACACGGACGCAATCAACACCGGCTCCATGGCCCCTCCGGTTTATCCCCGCTGGCGCGGGGAACACTTGCTCAAACGAAACCCGGAAAACGATGTAATCGGTTTATCCCCGCTGGCGCGGGGAACACCCCGGCTCCAGGATTTTCGGATCTGGTTGTCACGGTTTATCCCCGCTGGCGCGGGGAACACTGTTTCTCCAGTAAAAAATAATCGCTAACTTCCGGTTTATCCCCGCTGGCGCGGGGAACACAGAGTAAGCAAACATAAATGATACGTCTGTTACGGTTTATCCCCGCTGGCGCGGGGAACACGCCGCCGCTGCGAGTAAATACGGCAACGCAGCCGGTTTATCCCCGCTGGCGCGGGGAACACCGACACTCTCTCGCTCGCAGTAATTCCGAAAACGGTTTATCCCCGCTGGCGCGGGGAACACTTTCTTATGGCTCTAAGTCGTTTTGCATAATCCGGTTTATCCCCGCTGGCGCGGGGAACACTTCGCAACACTCTTCGGCAAAACGGAAAAGGCCGGTTTATCCCCGCTGGCGCGGGGAACACCTCTCAACCCCGGCGGCGTGACCCGAACTCAACGGTTTATCCCCGCTGGCGCGGGGAACACCACTGCCGATGAGATGACGCACCGCGACGTTACGGTTTATCCCCGCTGGCGCGGGGAACACTGGGGTTTAATTCGCGTAATTGCGGTGGGTTACGGTTTATCCCCGCTGGCGCGGGGAACACAATGAAATGCATTTCGAAATAAAACTACTGGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTGCAGGACTGCGAAGACGGGCGATTAATTTCCGGTTTATCCCCGCTGGCGCGGGGAACACCCCAGCATGTCGGCCATTCGCGTCAGAAATGACGGTTTATCCCCGCTGGCGCGGGGAACACCTGCTTTTTTCCTGCCTGACCACTGACCGGCGCGGTTTATCCCCGCTGGCGCGGGGAACACAATTTTCAGCGCTTGCCAGAGATTGACGATCGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP035202|1|1|196121-197797|CRISPRCasFinder
GGGCTTATCCTCGCGAATGCGGGGAACAC	TTCATGGCCCGAGCCAGTTCGGTGATATCAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACACACGATTATTACAACGTCAATTAGAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACGTATGCAGAACTCGCGGAGGAAGAAGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTCTGTTCCATGTCATTAACTCCCATAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGAAATCCACGGTAAAAAAATCAGAATTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCAGAGCACCACCCGAGGCGATTTGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGCCATCTGGCGAAGGATACGGCGACCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGCGCAGGTTAGACGGGTTAGACGACAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGCTTTTTTCCTGCCTGACCACTGACCGGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCAGATACCAGCAGACAACCACCGACAATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGACGCAATCAACACCGGCTCCATGGCCCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCTCAAACGAAACCCGGAAAACGATGTAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGGCTCCAGGATTTTCGGATCTGGTTGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTTTCTCCAGTAAAAAATAATCGCTAACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAGTAAGCAAACATAAATGATACGTCTGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGCCGCTGCGAGTAAATACGGCAACGCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGACACTCTCTCGCTCGCAGTAATTCCGAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCTTATGGCTCTAAGTCGTTTTGCATAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCAACACTCTTCGGCAAAACGGAAAAGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTCAACCCCGGCGGCGTGACCCGAACTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACTGCCGATGAGATGACGCACCGCGACGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGGGTTTAATTCGCGTAATTGCGGTGGGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGAAATGCATTTCGAAATAAAACTACTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCAGGACTGCGAAGACGGGCGATTAATTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCAGCATGTCGGCCATTCGCGTCAGAAATGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCTTTTTTCCTGCCTGACCACTGACCGGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTCAGCGCTTGCCAGAGATTGACGATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP035202|1|1|196121-197797|CRT
GGGCTTATCCTCGCGAATGCGGGGAACAC	TTCATGGCCCGAGCCAGTTCGGTGATATCAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACACACGATTATTACAACGTCAATTAGAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACGTATGCAGAACTCGCGGAGGAAGAAGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTCTGTTCCATGTCATTAACTCCCATAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGAAATCCACGGTAAAAAAATCAGAATTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCAGAGCACCACCCGAGGCGATTTGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGCCATCTGGCGAAGGATACGGCGACCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGCGCAGGTTAGACGGGTTAGACGACAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGCTTTTTTCCTGCCTGACCACTGACCGGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCAGATACCAGCAGACAACCACCGACAATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGACGCAATCAACACCGGCTCCATGGCCCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCTCAAACGAAACCCGGAAAACGATGTAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGGCTCCAGGATTTTCGGATCTGGTTGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTTTCTCCAGTAAAAAATAATCGCTAACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAGTAAGCAAACATAAATGATACGTCTGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGCCGCTGCGAGTAAATACGGCAACGCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGACACTCTCTCGCTCGCAGTAATTCCGAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCTTATGGCTCTAAGTCGTTTTGCATAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCAACACTCTTCGGCAAAACGGAAAAGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTCAACCCCGGCGGCGTGACCCGAACTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACTGCCGATGAGATGACGCACCGCGACGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGGGTTTAATTCGCGTAATTGCGGTGGGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGAAATGCATTTCGAAATAAAACTACTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCAGGACTGCGAAGACGGGCGATTAATTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCAGCATGTCGGCCATTCGCGTCAGAAATGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCTTTTTTCCTGCCTGACCACTGACCGGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTCAGCGCTTGCCAGAGATTGACGATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP035202|1|1|196732-197797|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGACGCAATCAACACCGGCTCCATGGCCCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCTCAAACGAAACCCGGAAAACGATGTAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGGCTCCAGGATTTTCGGATCTGGTTGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTTTCTCCAGTAAAAAATAATCGCTAACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAGTAAGCAAACATAAATGATACGTCTGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGCCGCTGCGAGTAAATACGGCAACGCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGACACTCTCTCGCTCGCAGTAATTCCGAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCTTATGGCTCTAAGTCGTTTTGCATAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCAACACTCTTCGGCAAAACGGAAAAGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTCAACCCCGGCGGCGTGACCCGAACTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACTGCCGATGAGATGACGCACCGCGACGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGGGTTTAATTCGCGTAATTGCGGTGGGTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGAAATGCATTTCGAAATAAAACTACTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGCAGGACTGCGAAGACGGGCGATTAATTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCAGCATGTCGGCCATTCGCGTCAGAAATGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCTTTTTTCCTGCCTGACCACTGACCGGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTCAGCGCTTGCCAGAGATTGACGATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035202.1\|WP_064145173.1\|203673_206337_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP035202.1\|WP_002915160.1\|189182_190091_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP035202.1\|WP_060415849.1\|190100_191516_-\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|182606
NZ_CP035202.1\|WP_064145171.1\|199735_200482_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP035202.1\|WP_023280474.1\|199103_199754_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP035202.1\|WP_004142787.1\|207376_209089_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP035202.1\|WP_002915156.1\|186305_186623_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP035202.1\|WP_009486039.1\|202105_203662_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP035202.1\|WP_002915177.1\|206543_207278_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP035202.1\|WP_009308506.1\|191753_192809_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP035202.1\|WP_004142782.1\|201566_202109_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	pfam09485_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP035202.1\|WP_009308509.1\|197893_198187_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP035202.1\|WP_002915159.1\|187745_189173_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP035202.1\|WP_064145169.1\|192844_194032_+\|DUF3142-domain-containing-protein	unknown	unknown	gnl\|CDD\|371478
NZ_CP035202.1\|WP_064145170.1\|194018_196040_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349729
NZ_CP035202.1\|WP_002915157.1\|186763_187090_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP035202.1\|WP_002915158.1\|187140_187746_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP035202.1\|WP_023313581.1\|185575_186286_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP035202.1\|WP_009308510.1\|198186_199107_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP035202.1\|WP_064145172.1\|200492_201548_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
NZ_CP035202.1\|WP_064145173.1\|203673_206337_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	5.13419e-146
NZ_CP035202.1\|WP_002915160.1\|189182_190091_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP035202.1\|WP_060415849.1\|190100_191516_-\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|182606	PRK10637, cysG, siroheme synthase CysG.	0
NZ_CP035202.1\|WP_064145171.1\|199735_200482_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.30908e-44
NZ_CP035202.1\|WP_023280474.1\|199103_199754_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	3.37655e-80
NZ_CP035202.1\|WP_004142787.1\|207376_209089_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP035202.1\|WP_002915156.1\|186305_186623_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	2.98223e-63
NZ_CP035202.1\|WP_009486039.1\|202105_203662_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	2.35079e-164
NZ_CP035202.1\|WP_002915177.1\|206543_207278_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.60207e-138
NZ_CP035202.1\|WP_009308506.1\|191753_192809_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP035202.1\|WP_004142782.1\|201566_202109_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.4294e-28
NZ_CP035202.1\|WP_009308509.1\|197893_198187_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	6.32738e-63
NZ_CP035202.1\|WP_002915159.1\|187745_189173_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP035202.1\|WP_064145169.1\|192844_194032_+\|DUF3142-domain-containing-protein	gnl\|CDD\|371478	pfam11340, DUF3142, Protein of unknown function (DUF3142). This bacterial family of proteins has no known function.	2.10425e-87
NZ_CP035202.1\|WP_064145170.1\|194018_196040_+\|hypothetical-protein	gnl\|CDD\|349729	cd18422, BTB_POZ_KCNG3, BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily G member 3 (KCNG3). KCNG3, also called voltage-gated potassium channel subunit Kv6.3 or voltage-gated potassium channel subunit Kv10.1, is an electrically silent modulatory subunit that can form functional heterotetrameric channels with KCNB1 (also known as Kv2.1), and further promotes a reduction in the rate of activation and inactivation of the delayed rectifier voltage-gated potassium channel KCNB1. Voltage-gated potassium (Kv) channels are composed of alpha subunits, which form the actual conductance pore, and cytoplasmic beta subunits, which are auxiliary proteins that associate with alpha subunits to modulate the activity of the Kv channel. KCNG3 is a regulatory alpha subunit that cannot form a functional homo-tetrameric channel. It forms hetero-tetrameric channels (with other functional alpha subunits) through its BTB/POZ domain, also known as tetramerization (T1) domain, which is a versatile protein-protein interaction motif.	0.00488901
NZ_CP035202.1\|WP_002915157.1\|186763_187090_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.97707e-47
NZ_CP035202.1\|WP_002915158.1\|187140_187746_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	3.18847e-150
NZ_CP035202.1\|WP_023313581.1\|185575_186286_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.32992e-118
NZ_CP035202.1\|WP_009308510.1\|198186_199107_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	5.1533e-156
NZ_CP035202.1\|WP_064145172.1\|200492_201548_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	3.44348e-133

>NZ_CP035202.1|WP_064145170.1|194018_196040_+|hypothetical-protein
MLTRKLPLAAFLAATLVAASSHACGPFFPNYLLADRQANLLYLPEGSFALESSRLVLADPRLPQWRDTSADKPAAPTAQDLLLKEIRASGSLAAAEKMAADLPTASRLYVLGAVAFAERDSRARDYFRQLLALPVEQQGEWGLKARYSLARDLMRDYPLTDSRSSHGSEQELREAFDLYQQIIDAVREGQQDPELLSLASLGQQGRIKHWQSDPIAAAHLYARQAAQGSPSGSLSLRYTVDVLNHPENEQFLQPGLDDPVIQQLLIASFFTRSSNLLYEPEPRPFDPTEVKNYHNELIAKLAQKVDRDMAGSDRLIALAYRNGQYPLVTLMLKNAKENGLTAWVRAKMALRAGDVNAAAAWYAKAAASFPPNETWGFQSYSDDIVGEEFVTPVCRIHAEQAILALNRDDYLQAMRLMYQAKENYWPDVAHIAERVLTVNELLAFVDKYVPAPSPSAPTTPKNAGRDSADARLRNLLARRLMRAGQYQKALAYFALAEDRDAARAFIDAFPKKGHKTAQAQGWWQAALILRHQGMELTGYEMAPDFALYGGGYSWPYYNQGPEDNSAVTSWISDGERQRVQRSLPKQDSHFLHYRWQAVTLAEKAADLLPYKSQAYAAVLCNATGWVWGRDAQLTKRLYQRYVKYGAPFPWAENFGRDCPEPDFSAIQETVKKQ
>NZ_CP035202.1|WP_064145169.1|192844_194032_+|DUF3142-domain-containing-protein
MINLRCSGVFFLLLAASAGALADSQVYIWQRVWNDQHKTALQQSQALFATLRVLGIQFHPQEGVRLARVNTSLLQQDGRPVWLVVRLDGSLTQLDTTTMLPQIKRLVTHWRKAGVNLTAIEIDYDAPTSRLSDYQRLLMAMRQGLPSDITLSITALPTWLTSPGLRPLLKAVDSSVLQLHSVQPPGTGLFDPTLARRWSRQYALIAPHPFYLALPAYGSALIAAPGQPASVESESPLWIAAEKQELSVSPQQIDTFIRELEQQPPYHFSGIVWFRLPLDNDTRAWSLSTLAAVIRHQPLTSCWQWLALPDKASASAESTLYELAIKNTGNIDAPLPAKITLTTEDCLAADGAGSYRFSEQTFSLTAPALLRAGRTQAIGWARCSTPPQGKFHVNP
>NZ_CP035202.1|WP_009308506.1|191753_192809_+|aminopeptidase
MFSALCRRLLPLALGTGFVFAAAPAFSALGDTASSQARHIATVFPGRMTGTPPEMLSADYLRQQFALMGYQSDVRSFNTRYIYTDSNQRKNWHNATGSTVIAAHEGKVRQQIIIMAHLDTYAPQSDKDVENNLGGLTLQGIDDNAMGLGVLLELAEHLKNVPTRYGIRFIATSGEEEGRLGAQNLLQRMSEAEKKNTLLVINLDNLVVGDKLYFNSGRSTPASVRKLTRDRALAIARSKGIAAYTNPGLNPAYPKGTSCCNDASVFDNAGIPVLSVEATNWSLGKKDGYQQRSKSASFPQGTSWHDVQLDNQQYIDHALPGRIEHRGREVVKVMLPLVKELAKVEKPSSLK
>NZ_CP035202.1|WP_060415849.1|190100_191516_-|uroporphyrinogen-III-C-methyltransferase
MDYLPLFAELKQRPVLVIGGGEIAERKIKFLLRAQAQVQVVAETLSPALADLAARQALSWRATAFSDSLVDDVFLVIAATEDEALNQRVFAAANARYRLVNVVDNQALCSFVFPSIVDRSPLLVAISSSGKAPVLSRILREKIEALLPTNLGRLAESASYWRNHLKTRLTTTEARRRFWERVFTGRFASLMVAGNSAEAEKALQDELDKPERETGEIILVGAGPGDAGLLTLRGLQAIQQADVVFHDHLVTQPVLELVRRDAELICVGKRAGEHSVPQHETNQLLVEAAKAGKTVVRLKGGDPFIFGRGAEELQAAAEAGIPFQVVPGVTAAAGATAYAGIPLTHRDYAQSAVFVTGHYKPDSAPFDWSLLAKSQQTLAIYMGTMKAAEISAQLIAHGRNSDTPVAVISRGTRDDQQTITGTLQQLEHLAKDAPMPALLVVGEVVQLHQQLAWFQHTSSAEGFNASVVNLA
>NZ_CP035202.1|WP_002915160.1|189182_190091_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLAAERPVLERDGMLMMIDDDRIDLQPGEVIEKRMVRFRTLGCWPLTGAVESEAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP035202.1|WP_002915159.1|187745_189173_-|sulfate-adenylyltransferase-subunit-CysN
MNTTIAQQIANEGGVEAYLHAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVEFSEARFNEIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSANMPWYSGPTLLEVLETVEIQRVVESQPLRFPVQYVNRPNLDFRGFSGTVASGTVQVGQRLKVLPSGVESSVARIVTFDGDLQEAAAGEAITLVLKDEIDISRGDLLVDAQASLPAVQSASIDVVWMAEQPLTPGQSYDIKIAGKKTRARVDAIRYQVDINNLTQREVESLPLNGIGLVELTFDEPLVLDPYQQNPVTGGLIFIDRLTNVTVGAGMVNEPHLQASTSASQYSAFELELNQLIRKHFPHWDARDLLGGK
>NZ_CP035202.1|WP_002915158.1|187140_187746_-|adenylyl-sulfate-kinase
MAQHDENVVWHAHPVTQQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHERGVSTYLLDGDNVRHGLCSDLGFSDEDRKENIRRVGEVARLMVDAGLVVLTAFISPHRAERQMVRERLGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPEKAEIHLDGEQLVTNLVHQLLDLLQQSDIIRS
>NZ_CP035202.1|WP_002915157.1|186763_187090_-|DUF3561-family-protein
MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWPFFLALMPVAVVVGIALHSLLNGKLLYSVSATILTVGLMFALLFLWLLG
>NZ_CP035202.1|WP_002915156.1|186305_186623_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGLHDYTRVNDDVTAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTRPGETFYRLVPDASKRNQASGQQQNNR
>NZ_CP035202.1|WP_023313581.1|185575_186286_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATFPGVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHAVAALLADARVQRVVIAVSPGDCRFSQLPLAQHPQITVVDGGAERADSVLAGLQALPEAQWVLVHDAARPCLHQDDLSRLLSLCETSRVGGILAAPVRDTMKRAEPGKTAIAHTVDRNDLWHALTPQFFPRELLVDCLTRALNEGATITDEASALEYCGFHPQLVAGRADNIKVTRPEDLALAEFYLTRSRHQEKA
>NZ_CP035202.1|WP_009308509.1|197893_198187_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLMVVTENVPPRLRGRLAIWLLEIRAGVYVGDTSKRIREMIWQQVIQLSDGGNVVMAWATNSESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP035202.1|WP_009308510.1|198186_199107_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREAPPARRSVEQLRGIEGSRVRQTYALLAKRYGVKWHGRNYDPKDWARGDVVNQCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAASHPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLSAGEIEPPQPPPDMLPPAIPEPESMGDKGHRGHG
>NZ_CP035202.1|WP_023280474.1|199103_199754_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLYTAQLSPLRLLHLVERGEYVMHQWLWQLFPGGQQRQFLYRREALQGAFRFFVLSPQLPAESEIFEIQSRSFNPELRAGQRLCFSLRANPTICKAGKRHDLLMDAKRQVKEQVEPRDIWAHQQQAALAWLTRQGEQSGFSLAETVVDAYRQQQIRREKSRQTIQFSSVDYTGMLVVNDPALFLQRLASGYGKSRAFGCGMMMIKPGDGA
>NZ_CP035202.1|WP_064145171.1|199735_200482_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLLAALRIRREEEQRLNAFNQHYSFLLCASSEPRWARDYHTVQMPKEVRKARYFSRREELQDSELLSALISRRDYYTDAWWMIAVAVTPDAPYSLEQLHEALRYPVFPLYLGRKSHPLALPLMPLLLEGHAAEVLRQAYRQYQERFNLLRLSLRQLQDQCWWEGEHAGLVANKILRRRDCPLNRQHWLFGERSMNQGTWLSKEETCTSQE
>NZ_CP035202.1|WP_064145172.1|200492_201548_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVMLGGATRLRISSQSLKRAWRTSELFEHALASHIGIRSGRIAREAAEILVKSGIEPRKAVDYVKAIGECFGKVKTKADQNDPLKCSETEQLAHISPAEFDAVKALAHRLAEEKRAATKEEAALLRHDRMAVDIAMFGRMLADQPTYNVEAACQVAHAFGVSETIVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVNNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYQPINGGDQLDVAVQRITALRENMNTVYGQQTAFQHFDVMNKQGSMNDVLDFICA
>NZ_CP035202.1|WP_004142782.1|201566_202109_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MNVVSDEHKATLRQWHEELQEKRGLRASLRRSATLNDVCLSEGFHSLMVQTHSLWNTQGKAWRFTALALVAALAAQVKTIDDRQTFAAQLGQKTGDTPVMSRLRFARLSAVKTPDELLRQLRRAISLLHGSVNLLSLAEDIFRWCREQDDLLNHRRRQQRPIEFIRIRWALDYYQAGDAE
>NZ_CP035202.1|WP_009486039.1|202105_203662_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNTFSLLTTAWLPVRYRDGTTGKLAPVGLTDEDVVDIAATRADLQGAAWQFLIGLLQCAVAPKNRNGWEDTWEEGLSAETLVAALAPLEAAFQFGPDTPSFMQDFDSLGGDKVSIASLLPEVPGAQTTKFNKDHFIKRGVTNSFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLIELQEYEGERLTPLWRKLWLNVLPQDAADMPLPAAYDESVFPWLAPTRTSEQASAITTPEQVDKLQAYWGMPRRIRLDFAATQPGTCDTCASESDGLLSQMAVKNYGINYDGWRHPLTPYRLALKGDGGFFSVKPQPGGLIWRDWLGLSQDNQTESNSEYPAQVVKVFNARGLRNIKAGLWGFGADFDNMKIRCWYEHHFPLLTDESTIPDLRKAAQTAARLLSLLRSALKEAWFDDPKGARGDFSFIDIDFWNQTQPLFLNLIHELENGQPAQERLDKWQRELWLFVRRCFDDRVFTNPYENNDLARCMTARKKYFATSAEKQSAKAARAKKQEAAQ
>NZ_CP035202.1|WP_064145173.1|203673_206337_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYNYWGKTRQGEPGGGDDYHLLCWHSLDVAAMGYWMVKRDIYGLAGYFRRLGINDIENAAQFFAWLLCWHDIGKFSRSFQQLYTHDNLCVQKDSRNTYEKISHASLGYWLWNSHFSDCPELFPNSSLSIRKLKRVITLWMPLTTGHHGRPPVGMRALDNFHPSDIKAAHDFLLAIKSLFPDMEIPSFWDDDAGVELFSHLSWFISAAVVLADWTGSSTRFFPRVSQRMPLDVYWRQANAQAEQAVNVFPPAAAVAPFTGIETLFPFIQHPTPLQKAVLELDISQPGPQLFILEDVTGAGKTEAALILTHRLMSAGKAQGLFFGLPTMATANAMFDRLAQSWLALYQSDARPSLVLAHSARGLMEGFNQRIWPGAVSGSEEPDDEQSFSQGCAAWFADSNKKALLAEVGVGTLDQALMAVMPFKHNNLRLLGLDNKVLLADEIHAYDAYMSRILESLIEQQARSGNCVILLSATLSQQQRDKLVASFSRGSGCALAAPLLGDDDYPWLTQVAGREVISRYVATRKEVERSVNIGWLDNEEACLTRIEQSASEGRCIAWIRNSIDDAVRIYRQLLARGAIPAEKISLFHSRFAFYDRQRIETETLSHFGKDDSTQRAGRVLIATQVIEQSLDIDMDDMISDLAPIDLLIQRAGRLQRHIRDRRGRLKIGGEDERAAPQLLILAPEWDEAPQEEWLTSALRNSAYVYPDHGRLWLTQRVLRQQGAIRMPQSARLLIESVYGEDIAISDGLAKAEQAQLAKYYCDRAFAHQMLLNFKPGYSPDSSDFLADKLSTRLAEESITLWLAKNVDGQLLPYACGAHPWEMSMLRVRESWWRKHKAEFTLLAEKPLQQWCVQQHQNPDFAVVIIVTDSPDCGYSASEGLIGTMEV
>NZ_CP035202.1|WP_002915177.1|206543_207278_-|phosphoadenosine-phosphosulfate-reductase
MSVLDLNALNALPKVERILALAETNAQLEKLDAEGRVAWALENLPGNYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAAESAAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRATLPVLAVQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP035202.1|WP_004142787.1|207376_209089_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAAENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQKKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKVHQGEFRITANQNLIVASVPEDQKARIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDKVEGVMSKHGVSDEHIVTRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHIGGNRNGTRIPRMYRENITESEILDSLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE

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Crispr_ID: NZ_CP035202_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035202_2

2321516-2321655

Orphan

Consensus_repeat	Method
CTGCTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP035202_2

>merge|NZ_CP035202|2|2321516-2321655|CRISPRCasFinder
CTGCTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCATAAAGCGGCTCCGTGCCCGGCGGCGCTGCGCTGGCCGGGGCTGCTGCTTCGGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA

>NZ_CP035202|2|2|2321516-2321655|CRISPRCasFinder
CTGCTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	TAAAGCGGCTCCGTGCCCGGCGGCGCTGCGCTGGCCGGGG
CTGCTGCTTCGGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035202.1\|WP_004213895.1\|2323788_2324241_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
NZ_CP035202.1\|WP_004222792.1\|2321710_2322571_-\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176522
NZ_CP035202.1\|WP_002889702.1\|2315427_2316771_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	unknown	unknown	gnl\|CDD\|235426
NZ_CP035202.1\|WP_004177332.1\|2327864_2328263_+\|sigma-factor-binding-protein-Crl	unknown	unknown	gnl\|CDD\|182882
NZ_CP035202.1\|WP_002889696.1\|2313537_2314305_+\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP035202.1\|WP_002889733.1\|2325998_2326457_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NZ_CP035202.1\|WP_002889742.1\|2326562_2327807_+\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
NZ_CP035202.1\|WP_049117945.1\|2330636_2331920_-\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236149
NZ_CP035202.1\|WP_002889726.1\|2322730_2323786_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP035202.1\|WP_004177336.1\|2318005_2318800_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	unknown	unknown	gnl\|CDD\|235423
NZ_CP035202.1\|WP_004213891.1\|2328348_2329041_-\|DNA-binding-transcriptional-regulator-CsiR	unknown	unknown	gnl\|CDD\|183181
NZ_CP035202.1\|WP_004147186.1\|2316774_2318013_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	unknown	unknown	gnl\|CDD\|235425
NZ_CP035202.1\|WP_002889716.1\|2318792_2319431_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	unknown	unknown	gnl\|CDD\|236457
NZ_CP035202.1\|WP_002889699.1\|2314275_2315016_-\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP035202.1\|WP_004177335.1\|2319437_2320034_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	unknown	unknown	gnl\|CDD\|235074
NZ_CP035202.1\|WP_002889795.1\|2329086_2330487_-\|GABA-permease	unknown	unknown	gnl\|CDD\|182297
NZ_CP035202.1\|WP_004152033.1\|2324283_2325741_-\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986
NZ_CP035202.1\|WP_004145825.1\|2312881_2313463_+\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP035202.1\|WP_002889722.1\|2321272_2321488_+\|(Na+)-NQR-maturation-NqrM	unknown	unknown	gnl\|CDD\|225538
NZ_CP035202.1\|WP_064145197.1\|2320046_2321270_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	unknown	unknown	gnl\|CDD\|235481

Protein	Function_ID	Function_description	E-value
NZ_CP035202.1\|WP_004213895.1\|2323788_2324241_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	1.35875e-84
NZ_CP035202.1\|WP_004222792.1\|2321710_2322571_-\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|176522	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.	1.06698e-128
NZ_CP035202.1\|WP_002889702.1\|2315427_2316771_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	gnl\|CDD\|235426	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional.	0
NZ_CP035202.1\|WP_004177332.1\|2327864_2328263_+\|sigma-factor-binding-protein-Crl	gnl\|CDD\|182882	PRK10984, PRK10984, sigma factor-binding protein Crl.	3.74492e-83
NZ_CP035202.1\|WP_002889696.1\|2313537_2314305_+\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.08772e-144
NZ_CP035202.1\|WP_002889733.1\|2325998_2326457_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	2.19173e-113
NZ_CP035202.1\|WP_002889742.1\|2326562_2327807_+\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
NZ_CP035202.1\|WP_049117945.1\|2330636_2331920_-\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236149	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP035202.1\|WP_002889726.1\|2322730_2323786_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP035202.1\|WP_004177336.1\|2318005_2318800_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	gnl\|CDD\|235423	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional.	1.37213e-153
NZ_CP035202.1\|WP_004213891.1\|2328348_2329041_-\|DNA-binding-transcriptional-regulator-CsiR	gnl\|CDD\|183181	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional.	2.66819e-151
NZ_CP035202.1\|WP_004147186.1\|2316774_2318013_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	gnl\|CDD\|235425	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional.	0
NZ_CP035202.1\|WP_002889716.1\|2318792_2319431_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	gnl\|CDD\|236457	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated.	1.0782e-142
NZ_CP035202.1\|WP_002889699.1\|2314275_2315016_-\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.01465e-109
NZ_CP035202.1\|WP_004177335.1\|2319437_2320034_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	gnl\|CDD\|235074	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional.	4.25239e-127
NZ_CP035202.1\|WP_002889795.1\|2329086_2330487_-\|GABA-permease	gnl\|CDD\|182297	PRK10197, PRK10197, GABA permease.	0
NZ_CP035202.1\|WP_004152033.1\|2324283_2325741_-\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
NZ_CP035202.1\|WP_004145825.1\|2312881_2313463_+\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	2.35176e-148
NZ_CP035202.1\|WP_002889722.1\|2321272_2321488_+\|(Na+)-NQR-maturation-NqrM	gnl\|CDD\|225538	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown].	5.41902e-29
NZ_CP035202.1\|WP_064145197.1\|2320046_2321270_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	gnl\|CDD\|235481	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional.	0

>NZ_CP035202.1|WP_002889722.1|2321272_2321488_+|(Na+)-NQR-maturation-NqrM
MLTVFIATFVIFALVILGMSLGYLVKRKSIQGSCGGISALGLEKVCDCPEPCDARKKRLAREAQRQQRRIL
>NZ_CP035202.1|WP_064145197.1|2320046_2321270_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F
MEIILGVVMFTLIVLVLSGLILAARSKLVNAGDVVIEINNEADKQIRTPAGDKLLNTLSSNGIFVSSACGGGGSCGQCRVTVKEGGGDILPTELSHITKRDAKAGCRLACQVAVKQNMKIELPEEIFGVKKWECEVISNDNKATFIKELKLRIPEGEVVPFRAGGYIQIECPPHKVAYADFDVPDEYRSDWDKFNLFRYVSDVKEPTLRAYSMANYPEEKGIIMLNVRIATPPPKVPDAPPGIMSSYIWSLKPGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHSTRKISFWYGARSLREMFYDEEFEQLARDNPNFTFHVALSDPLPEDNWTGHTGFIHNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENILLDDFGG
>NZ_CP035202.1|WP_004177335.1|2319437_2320034_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E
MAHYISLFVRAVFVENMALAFFLGMCTFLAVSKKVSTAFGLGVAVTVVLGLAVPINNLVYNLVLRDGALVEGVDLSFLNFITFIGVIAALVQILEMILDKYFPALYNALGIFLPLIAVNCAIFGGVSFMVQRDYNFPESIVYGFGSGIGWMLAIVAMAGIREKMKYANVPAGLRGLGITFITTGLMALGFMSFSGVQL
>NZ_CP035202.1|WP_002889716.1|2318792_2319431_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D
MAEQSDMKEVKRVLVGPLIANNPIALQVLGVCSALAVTTKLETAFVMTIAVTLVTAFSSMFISMIRHHIPNSVRIIVQMAIIASLVIVVDQLLRAFAYETSKQLSVFVGLIITNCIVMGRAEAYAMKSPPLASFMDGIGNGLGYGAILIIVGFLRELIGSGKLFGITVLETVQNGGWYQPNGLFLLAPSAFFIIGLLIWALRSWKPEQQEKE
>NZ_CP035202.1|WP_004177336.1|2318005_2318800_+|Na(+)-translocating-NADH-quinone-reductase-subunit-C
MAEKKSNDSIGKTLLVVLVLCLVCSIVVAGSAVGLKSRQQAQRALDKQRNILAVSGLMHPGMDADAVADTFAARITPRLVNLATGELLEKDPGKFNQAQALKDPQQSMALDASQDPAGIKRRSNLAEIYLVRDAQQKIEQVVLPIYGNGLWSMMYAFVALDVDGRTVKGITYYDQGETPGLGGEVENPNWRQQFVGKQVLDDNGMPALKVVKGGARAGDLHAVDGLSGATLTSNGVQHSFDFWMGELGFGPFLKKVREGELNNG
>NZ_CP035202.1|WP_004147186.1|2316774_2318013_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B
MGLKHLIEKLEPHFTHGGKLEKYYPLYEAAATIFYTPGQVTRGAAHVRDAIDLKRMMILVWFAVFPAMFWGMYNVGLQTIPALHKLYGAEQLQQAIANNWHYSVAQWLGVSFSADAGWLSMMTLGAVFFLPIYITVFIVGGFWEVLFAIVRKHEINEGFFVTSILFALIVPPTLPLWQAALGISFGVVIAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGFSGATPLSQWASGGGEALVNVATGVPVSWMDAFLGNIPGSIGEVSTLMIFIGGAIILFGRVASWRIVAGVMIGMIATATLFNVIGSDTNPMFAMPWYWHLVLGGFAFGMMFMATDPVSASFTDKGKWSYGVLIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDYLVVQANIKRRKSRG
>NZ_CP035202.1|WP_002889702.1|2315427_2316771_+|Na(+)-translocating-NADH-quinone-reductase-subunit-A
MIKITKGLDLPIAGMPLQQISPAPAVKRVALLGEEYVGMRPAMAVKEGDRVKKGQILFEDKKIPGVCFTAPASGIVSAIHRGERRVLQSVVIDIEGNDAVAFTRYAADALAELPRDTVQQQLLASGQWTALRTRPFSKTPLPGSTPAAIFVNAMDTNPLAAEPQPIILAERAAFDAGLTVLTRLTDGKVHVCQPSGGKLGGHPLGQVCFNQFSGPHPAGLPGTHIHFLEPVSLNKQVWHLNYQDAIAIGKLFLDGELYCERIIALGGPQVTSPRLVKTTLGASLEDLLAGELQEGENRVISGSVLSGARAHGPHAFLGRFHLQVSVVKEGREKELFGWVMPGKEKFSITRTTLGHFFKRKRFHFSTDTNGGERAMVPIGNYERVMPLDILPTILLRDLLAGDTDSAQALGCLELDEEDLALCTYVCPGKYEYGPALRSVLTRIEQEG
>NZ_CP035202.1|WP_002889699.1|2314275_2315016_-|murein-L,D-transpeptidase
MRKIALFIAMLLLPCVSFAGLLSSNSPTTPVSKEYKQQLMGSPVYIEIFKEERMLDLYVKMGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYNVTRSQLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALVFGQPSVQVSIYPFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPVVSVTDGRYVVSKPLSHEVVQPQLASNYTLPETK
>NZ_CP035202.1|WP_002889696.1|2313537_2314305_+|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFQSPIAKLVQDYPIKSCSVVAHIRQANRGRVALENTHPFTRELWGRNWTYAHNGQLKGYKSLKTGNFHPVGETDSEKAFCWLLHRLTERYPRTPGNMLGVFKYIATLAGELREKGVFNMLLSDGRYVMAFCSTNLHWITRRAPFGVAKLLDQDVEIDFQRETTPNDVVTVIATQPLTANETWHKIMPGEWALFCLGERVV
>NZ_CP035202.1|WP_004145825.1|2312881_2313463_+|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGISTSGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEIRVPHFGYADRIQEIHIKVIHILIMLIEKEMAKG
>NZ_CP035202.1|WP_004222792.1|2321710_2322571_-|glycerophosphoryl-diester-phosphodiesterase
MKKILTALCLLATAGAWAAPQLIAHRGGTGDAPENTLPAIKRALENNAEAIWVTVQLSRDGVPVLYRSSDLSALTNSEGKVSSLTAAELAKVDAGWKWGDDSHPWRGKQATIPTLQSVLQQWPHTFFYIDIKSPDADPTVMGQRLLEVLKTTDSLDRVRVYSTEDRYIAALPPAIPRFVTRSETRTRLANISLSHQCQPASQRDGEQWYGLELKRKVEVVEKFTLGEGISPATLTWDKEAMDCFRSQDKAHIIFFGINSAEDYRTAIELGADGVMVDSPAQAKSWQ
>NZ_CP035202.1|WP_002889726.1|2322730_2323786_+|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPLAIGGSRVQRGVISTANYPARKFGVRSAMPTATALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVSDSEHCHGSATLIAQEIRQTIERELRLTASAGVAPVKFLAKIASDMNKPNGQFVIAPHQVAEFVRALPLAKIPGVGKVSAAKLENMGLRTCGDVQNSDLAMLLKRFGKFGRILWERSHGIDEREIHNDRQRKSVGVERTLAEDIHEWPECEAIIENLYPELERRLAKVKPDLLIARQGIKLKFNDFQLTTQEHVWPRLNKEDLIATAHKAWDERRGGRGVRLVGLHVTLLDPQLERQLLLGI
>NZ_CP035202.1|WP_004213895.1|2323788_2324241_+|GNAT-family-N-acetyltransferase
MHIRAYRDSDLPLLCQIFLRAVRETASRDYTPGQIAAWAQVDETRWRQKLADSIGLVAMVNSQPVGFITAIGTHIDLLFVSPDRARQGIGGALIEALCVQYPAQILTVDASITAKPCFTAHGFKVVAEQRVAARGEWFINYRMEKRVALR
>NZ_CP035202.1|WP_004152033.1|2324283_2325741_-|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIMGWAKEKGLHAERDQVGNILIRKGATAGMENRKPVALQAHLDMVPQKNNDTVHDFVKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADDSVAHGPLEVLLTMTEEAGMDGAFGLQANWLQADILINTDSEEEGEIYMGCAGGIDFTSNLALTREAIPAGFQSFKVTLKGLKGGHSGGDIHLGLGNANKLLSRFLAGHADELDLRLVDFNGGTLRNAIPREAYATVAVAADKADALKALVNTYQALLKNELEAKEKNLVVLVEAVDNDKAALTQASRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDDNVQIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGQYWTLLTELLKAIPAK
>NZ_CP035202.1|WP_002889733.1|2325998_2326457_+|xanthine-phosphoribosyltransferase
MSEKYVVTWDMLQIHARKLASRLLPVEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPIAGR
>NZ_CP035202.1|WP_002889742.1|2326562_2327807_+|esterase-FrsA
MSQANLSETLFKPRFKHPETSTLVRRFSAGKPQAMQSALSGNHVDHWYRLINRLMWIWRGVTPQEILDVQARIVMSEAERTDPELFDTVIGYRGGNWIFEWAKEAMQWQQKAGQEADPLLSGRHWLHASNLYSIAAYPHIKGDELAEQAQALANRAYEEAAQRLPGSLRELEFTIPGGSPITGFLHMPKGEGPFPTVLMCGGLDSLQTDYYNLYENYFSPLGIAMLTIDMPSIGFSSKWTLNQDTSLLHQHALRHLENVPWIDHTRVAAFGFRFGANIAVRLGYLEPQRLKAVACLGPVVHGLLVDPLHQGRVPEMYLDVLASRLGMHDASDEALRVELNRYSLKTQGLLGRRCPTPMLSGFWKDDPFSPEEESRLITSSSADGKLLEIPFNPVYRNFDHALRQIARWINHRFG
>NZ_CP035202.1|WP_004177332.1|2327864_2328263_+|sigma-factor-binding-protein-Crl
MTLPSGHLKSKLIKKFTALGPYIREEQCHDNRFFFDCLAVCVNVKPAPEKREFWGWWMEMEAQESRFTYSYQFGLFNKEGSWQAVDIGDPEVSDRLEKTLREFHERAAALLTTFNLKLEPADDFSEPVRLRA
>NZ_CP035202.1|WP_004213891.1|2328348_2329041_-|DNA-binding-transcriptional-regulator-CsiR
MTAIPQATAIDGYRWLKNDIIRGVYHPDEKLRMSLLTSRYGLGVGPLREALSQLVAERLVTVVNQKGYRVAPMSEQELLDIFDARANMEAMLVRLAIERGGDEWEAELLARAHLLNKLESCEASEHLLDEWDQRHQAFHTAIVAGCGSQYLLQMRERLFDLAARYRFIWLRTTVLSVEMLEDKHVQHQTLVDAILARDAEQASALMREHLLTPIPIIQQAMAGKLSPQAG
>NZ_CP035202.1|WP_002889795.1|2329086_2330487_-|GABA-permease
MGQLSQSQDLGAGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAIILHSWVPGVPVWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIVLGAVAITGFYPYAEVSGISRLWDHGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPDKHIVRATNSVIWRISIFYLCSIFIVVALIPWNMPGLKSIGSYRSVLELLHIPYAKLIMDGVILLSVTSCLNSALYTASRMLYSLSRRGDAPAIMGRTNRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILQAQGGEIRLRMWLYPYLTWLVIAFITFVLVVMLFRPAQQLEVISTGLLALGIICTVPIMSRWKKLVLWQKLPLQNTR
>NZ_CP035202.1|WP_049117945.1|2330636_2331920_-|4-aminobutyrate--2-oxoglutarate-transaminase
MNSNRAMMARRSDAVPRGVGQIHPIFAERAENCRVWDVEGREYLDFAGGIAVLNTGHLHPQVVAAVEDQLKKLSHTCFQVLAYEPYLALCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATGRSGAIAFTGAYHGRTHYTLSLTGKVNPYSAGMGLMPGHVYRALYPCALHGVSDDEAIASIHRIFKNDAAPEDIAAIIIEPVQGEGGFYAASPVFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAADITTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLQIFEQENLLEKANQLGDTLRQGLLAIAEDHPEIGDVRGLGAMIAIELFEEGDRSRPNARLTADIVARARDKGLILLSCGPYYNVLRILVPLTIEEAQIEQGLKIIADCFSEAKQA

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Crispr_ID: NZ_CP035202_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035202_3

2942225-2942302

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP035202_3

>merge|NZ_CP035202|3|2942225-2942302|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP035202|3|3|2942225-2942302|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035202.1\|WP_004147662.1\|2927280_2928366_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP035202.1\|WP_004209719.1\|2933883_2935101_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP035202.1\|WP_002895580.1\|2944504_2945545_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP035202.1\|WP_004147672.1\|2940293_2941676_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP035202.1\|WP_004176804.1\|2945541_2946699_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP035202.1\|WP_019705952.1\|2928899_2929331_+\|universal-stress-protein-G	unknown	unknown	gnl\|CDD\|185353
NZ_CP035202.1\|WP_004209720.1\|2935097_2936054_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP035202.1\|WP_004151699.1\|2936983_2938672_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP035202.1\|WP_012737677.1\|2938668_2940195_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP035202.1\|WP_002895652.1\|2948903_2949116_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035202.1\|WP_002895648.1\|2947430_2948153_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP035202.1\|WP_004142100.1\|2946682_2947438_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP035202.1\|WP_002895655.1\|2949527_2951549_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP035202.1\|WP_074185178.1\|2949290_2949551_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035202.1\|WP_004176805.1\|2943001_2944291_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP035202.1\|WP_004142122.1\|2932343_2933627_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP035202.1\|WP_002895358.1\|2936115_2936841_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP035202.1\|WP_002895575.1\|2942454_2942931_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP035202.1\|WP_023284866.1\|2929382_2932070_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|319775
NZ_CP035202.1\|WP_004152853.1\|2948094_2948817_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487

Protein	Function_ID	Function_description	E-value
NZ_CP035202.1\|WP_004147662.1\|2927280_2928366_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.18674e-67
NZ_CP035202.1\|WP_004209719.1\|2933883_2935101_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP035202.1\|WP_002895580.1\|2944504_2945545_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP035202.1\|WP_004147672.1\|2940293_2941676_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP035202.1\|WP_004176804.1\|2945541_2946699_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP035202.1\|WP_019705952.1\|2928899_2929331_+\|universal-stress-protein-G	gnl\|CDD\|185353	PRK15456, PRK15456, universal stress protein UspG; Provisional.	6.41433e-44
NZ_CP035202.1\|WP_004209720.1\|2935097_2936054_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	1.06556e-177
NZ_CP035202.1\|WP_004151699.1\|2936983_2938672_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP035202.1\|WP_012737677.1\|2938668_2940195_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP035202.1\|WP_002895648.1\|2947430_2948153_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP035202.1\|WP_004142100.1\|2946682_2947438_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP035202.1\|WP_002895655.1\|2949527_2951549_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP035202.1\|WP_004176805.1\|2943001_2944291_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP035202.1\|WP_004142122.1\|2932343_2933627_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP035202.1\|WP_002895358.1\|2936115_2936841_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP035202.1\|WP_002895575.1\|2942454_2942931_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP035202.1\|WP_023284866.1\|2929382_2932070_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|319775	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase. This subfamily includes the P-type Na(+)-ATPase of an alkaliphilic bacterium Exiguobacterium aurantiacum Mna and cyanobacterium Synechocystis sp. PCC 6803 PMA1, a cation-transporting ATPase which may translocate calcium. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP035202.1\|WP_004152853.1\|2948094_2948817_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74

>NZ_CP035202.1|WP_004147672.1|2940293_2941676_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP035202.1|WP_012737677.1|2938668_2940195_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLARLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGDWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP035202.1|WP_004151699.1|2936983_2938672_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP035202.1|WP_002895358.1|2936115_2936841_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP035202.1|WP_004209720.1|2935097_2936054_+|formimidoylglutamase
MMLWQATPANLWQGRDDSAEASNALRLFQTIARAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEVAHQALREAVADCQRAGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFAECASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIIEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRSGKLQAVDLVEFNPLFDIDGQGARTAARVAWQIAHWWR
>NZ_CP035202.1|WP_004209719.1|2933883_2935101_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDANGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWQRVVRGELQ
>NZ_CP035202.1|WP_004142122.1|2932343_2933627_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATVGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP035202.1|WP_023284866.1|2929382_2932070_+|cation-transporting-P-type-ATPase
MNTDKPGAPYYQRSVEETLASVQSSPEGISGTEAATRLQQYGENALPQKPGKPAWLRFIAHFNDVLIYVLLAAALLKAVMGHWIDMAVILAVAVVNALIGFIQESNAEKSLQSIRNMLSSEAVAIRQGNHETIPTTSLVPGDIVVIRAGDRIPADLRVIEAHNLRVEEAILTGESTVVEKTTEPLSGDLPLGDRSNLLFSGTTVSSGAGKGIVVATGGNTELGHINQMMAGIEKHRTPLLVQMDKLGKAIFILILVMMAALFVFSLLFRDMPVSELMLSLISLAVASVPEGLPAIISIILSLGVQAMARQKAIIRKLPTVETLGAMTVICSDKTGTLTMNEMTVKAVITADSVYRVEGDSYEPVGKIHAIDDPTPVTIAPGSLFERYLRTIDLCNDSQLIKEESGLWKITGGPTEGALKVLAAKVTLPPLTSELRSKIPFDSQYKYMSTLYRLGEEEVVLVTGAPDVLFRLCQYQQSDSGLQPLDLPYWEGKIEEYAREGLRMVAAAWKPAAAGQTELTHQDLQQGVILLGVAGMMDPPRPEAITAIADCLQAGIRVKMITGDHPQTAMSIGKMLGIGNAGNAITGRELEVMDDAQLSVAAQQFDIFARTSPEDKFRLVQALQSKKEIVGMTGDGVNDAPALKQADVGVAMGIKGTEVTKEAADMVLTDDNFATIASAVREGRRVYDNLKKTILFVMPTNLAQGLLIVIALLAGNVLPLTPVLILWMNMATSATLSFGLAFEAGEKNIMRRPPRDPKIHVMDGFAIWRVAFVGSMIAVSAFILEAWLQPRGYSPEFIRTVLLQTLVTAQWFYMLNCRVSDGFSLTKGLLANKGIWIVSGVLLLLQLLIIYAPFMQMLFGTTGLPFRYWVITFIIGFAMFLIVELEKPLTRKWRSA
>NZ_CP035202.1|WP_019705952.1|2928899_2929331_+|universal-stress-protein-G
MYKNIVVPVDVFDAGLADKALSHAKFLAQHSAGQIHLIHVIPAFSPVLTRGFISDARKMEDHLLNTAKEKLSELVKKNGLAEDASHLYVRSGNVRDQVIVLADELKADVVIVGSRNPGIQTHLLGSEAANIVRYAHVPVFVVR
>NZ_CP035202.1|WP_004147662.1|2927280_2928366_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRYFSLIPVVIIFTTACDQKAPTVESAPRMVKVAQVTAVGNTQQRTFPARIESGDSTELSFKRGGQVESLDIRQGASVAQGQTLARLNAREAQQRVNERQTAATLAQRQFDRFQTLAGRQAISQAEMDVQRANRDAANAALKIAREELAQMSLIAPFSGIAAGVHIRNHQVVAAGQPVITLTRTDLLDVVFSIPENLFTSLDIRNTAYRPVVRINTLPGREFTAEYKEHTGSSDNSTLTWQIVLTMPRPDDFPAVGGVSGTVTVNLGNLPASAGRETLIVPAEAVFNPDNRPKNEPVVWVVKGDNAHRYLEERKVTVGEVTSQGVAITDGLRAGEQVVAAGVSELHAGQPVRVWTRERGL
>NZ_CP035202.1|WP_002895575.1|2942454_2942931_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP035202.1|WP_004176805.1|2943001_2944291_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVASESLRLLESGEWQPQVAAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP035202.1|WP_002895580.1|2944504_2945545_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP035202.1|WP_004176804.1|2945541_2946699_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALADWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGQQRRDILAARIRQFREGMGEVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP035202.1|WP_004142100.1|2946682_2947438_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP035202.1|WP_002895648.1|2947430_2948153_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP035202.1|WP_004152853.1|2948094_2948817_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP035202.1|WP_002895652.1|2948903_2949116_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP035202.1|WP_074185178.1|2949290_2949551_-|hypothetical-protein
MQYKRFTHQSEPEKRISGRCLILPPGPFFANKLYWIFKQCILMITPQKGLIGRQAGCKTRVRRNNPPAARVIPRKFYLLTFVKRTD
>NZ_CP035202.1|WP_002895655.1|2949527_2951549_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	187627-187658	7	0.781
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	150276-150307	7	0.781
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	450020-450051	7	0.781
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	187638-187669	7	0.781
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	157481-157512	7	0.781
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_CP017304	Rhodococcus sp. YL-1 plasmid pYLL2 sequence	40869-40900	7	0.781
NZ_CP035202_1	1.21\|197371\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197371-197402	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	172595-172626	7	0.781
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	605717-605748	8	0.75
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	278766-278797	8	0.75
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	278768-278799	8	0.75
NZ_CP035202_1	1.3\|196272\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196272-196303	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	385336-385367	8	0.75
NZ_CP035202_1	1.7\|196516\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196516-196547	32	NZ_CP015441	Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence	58109-58140	8	0.75
NZ_CP035202_1	1.16\|197066\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197066-197097	32	NC_047773	Klebsiella phage vB_KpnP_KpV766, complete genome	37040-37071	8	0.75
NZ_CP035202_1	1.16\|197066\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197066-197097	32	LN866626	Klebsiella phage vB_KpnP_KpV289, complete genome	36814-36845	8	0.75
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_LT703506	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2	103828-103859	8	0.75
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_CP013635	Rhizobium sp. N324 plasmid pRspN324e, complete sequence	32878-32909	8	0.75
NZ_CP035202_1	1.25\|197615\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197615-197646	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	424698-424729	8	0.75
NZ_CP035202_1	1.25\|197615\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197615-197646	32	NZ_CP022659	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence	50333-50364	8	0.75
NZ_CP035202_1	1.25\|197615\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197615-197646	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	171807-171838	8	0.75
NZ_CP035202_1	1.25\|197615\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197615-197646	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	623910-623941	8	0.75
NZ_CP035202_1	1.25\|197615\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197615-197646	32	KT630646	Salmonella phage SEN5, complete genome	21355-21386	8	0.75
NZ_CP035202_1	1.25\|197615\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197615-197646	32	KT630645	Salmonella phage SEN4, complete genome	21355-21386	8	0.75
NZ_CP035202_1	1.4\|196333\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196333-196364	32	MN176229	Bacillus phage 055SW001, complete genome	17717-17748	9	0.719
NZ_CP035202_1	1.7\|196516\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196516-196547	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	757870-757901	9	0.719
NZ_CP035202_1	1.7\|196516\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196516-196547	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1810378-1810409	9	0.719
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_CP015322	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence	239974-240005	9	0.719
NZ_CP035202_1	1.20\|197310\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197310-197341	32	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	199739-199770	9	0.719
NZ_CP035202_1	1.20\|197310\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197310-197341	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	53440-53471	9	0.719
NZ_CP035202_1	1.27\|197737\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197737-197768	32	NZ_CP050844	Klebsiella pneumoniae strain Bckp186 plasmid pBckp186, complete sequence	163194-163225	9	0.719
NZ_CP035202_1	1.27\|197737\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197737-197768	32	NZ_CP050830	Klebsiella pneumoniae strain Bckp067 plasmid pBckp067, complete sequence	172195-172226	9	0.719
NZ_CP035202_1	1.27\|197737\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197737-197768	32	NZ_CP013712	Klebsiella pneumoniae strain J1 plasmid 1, complete sequence	42107-42138	9	0.719
NZ_CP035202_1	1.4\|196333\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196333-196364	32	MN176226	Bacillus phage 035JT001, complete genome	18391-18422	10	0.688
NZ_CP035202_1	1.5\|196394\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196394-196425	32	NZ_CP022249	Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence	24125-24156	10	0.688
NZ_CP035202_1	1.5\|196394\|32\|NZ_CP035202\|CRISPRCasFinder,CRT	196394-196425	32	NZ_CP022249	Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence	34415-34446	10	0.688
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	364118-364149	10	0.688
NZ_CP035202_1	1.19\|197249\|32\|NZ_CP035202\|CRISPRCasFinder,CRT,PILER-CR	197249-197280	32	NZ_CP039640	Azospirillum sp. TSH100 plasmid p1, complete sequence	189541-189572	10	0.688

1. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 7, identity: 0.781

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaaccttgcggaaatcgcggaggaagaagagc	Protospacer
 *  . ***.*** ******************

2. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaaccttgcggaaatcgcggaggaagaagagc	Protospacer
 *  . ***.*** ******************

3. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 7, identity: 0.781

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaaccttgcggaaatcgcggaggaagaagagc	Protospacer
 *  . ***.*** ******************

4. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 7, identity: 0.781

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaaccttgcggaaatcgcggaggaagaagagc	Protospacer
 *  . ***.*** ******************

5. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
ctggcgagcctcttcggcaagacggacaaggc	Protospacer
.* **.*  ***********.***** *****

6. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 7, identity: 0.781

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
tccgcaaccctgttcggcaaaacggggtacgc	Protospacer
*.****** ** *************.. * **

7. spacer 1.21|197371|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 7, identity: 0.781

cactgccgatgagatgacgcaccgcgacgtta	CRISPR spacer
cgcggtcgatgcgatgacgcaccgcgacggag	Protospacer
*.* *.***** *****************  .

8. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
tgccgatgcagaactcgcgcaggaagaagtct	Protospacer
..*  ************** *********  .

9. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 8, identity: 0.75

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaacctcgcggaaatcgcggaggaagaagagc	Protospacer
 *  . .**.*** ******************

10. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 8, identity: 0.75

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaacctcgcggaaatcgcggaggaagaagagc	Protospacer
 *  . .**.*** ******************

11. spacer 1.3|196272|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 8, identity: 0.75

cacgtatgcagaactcgcggaggaagaagagc	CRISPR spacer
gaacctcgcggaaatcgcggaggaagaagagc	Protospacer
 *  . .**.*** ******************

12. spacer 1.7|196516|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP015441 (Erythrobacter atlanticus strain s21-N3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tccgccatctggcgaaggatacggcgaccctg	CRISPR spacer
atgggcttctggcgaacgatacggcgatccgg	Protospacer
 . * * ********* **********.** *

13. spacer 1.16|197066|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NC_047773 (Klebsiella phage vB_KpnP_KpV766, complete genome) position: , mismatch: 8, identity: 0.75

gccgccgctgcgagtaaatacggcaacgcagc	CRISPR spacer
ttcgaggctgtgggtaaatacggcaacgcatt	Protospacer
 .**  ****.*.***************** .

14. spacer 1.16|197066|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to LN866626 (Klebsiella phage vB_KpnP_KpV289, complete genome) position: , mismatch: 8, identity: 0.75

gccgccgctgcgagtaaatacggcaacgcagc	CRISPR spacer
ttcgaggctgtgggtaaatacggcaacgcatt	Protospacer
 .**  ****.*.***************** .

15. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT703506 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2) position: , mismatch: 8, identity: 0.75

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
agtgcaacacttttcggcacaacggaacgagc	Protospacer
  .********.******* ******* ..**

16. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
cacacaacactgtttggcaaaacggaaatatc	Protospacer
. *.******* **.************* . *

17. spacer 1.25|197615|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

cccagcatgtcggccattcgcgtcagaaatga	CRISPR spacer
gcgagcgtgtcggccatgcgcgtcaggacggt	Protospacer
 * ***.********** ********.*  *

18. spacer 1.25|197615|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022659 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence) position: , mismatch: 8, identity: 0.75

cccagcatgtcggccattcgcgtcagaaatga	CRISPR spacer
cccagcatttcggccatgcgcgttaagaaact	Protospacer
******** ******** *****.*..**

19. spacer 1.25|197615|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

cccagcatgtcggccattcgcgtcagaaatga	CRISPR spacer
gcgagcgtgtcggccatgcgcgtcaggacggt	Protospacer
 * ***.********** ********.*  *

20. spacer 1.25|197615|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 8, identity: 0.75

cccagcatgtcggccattcgcgtcagaaatga	CRISPR spacer
gcgagcgtgtcggccatgcgcgtcaggacggt	Protospacer
 * ***.********** ********.*  *

21. spacer 1.25|197615|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to KT630646 (Salmonella phage SEN5, complete genome) position: , mismatch: 8, identity: 0.75

cccagcatgtcggccattcgcgtcagaaatga	CRISPR spacer
cccagcatttcggccatgcgcgttaagaagct	Protospacer
******** ******** *****.*..**

22. spacer 1.25|197615|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to KT630645 (Salmonella phage SEN4, complete genome) position: , mismatch: 8, identity: 0.75

cccagcatgtcggccattcgcgtcagaaatga	CRISPR spacer
cccagcatttcggccatgcgcgttaagaagct	Protospacer
******** ******** *****.*..**

23. spacer 1.4|196333|32|NZ_CP035202|CRISPRCasFinder,CRT matches to MN176229 (Bacillus phage 055SW001, complete genome) position: , mismatch: 9, identity: 0.719

aatttctgttccatgtcattaactcccatagc	CRISPR spacer
aatttctgaaccatgtcattaactacaggcat	Protospacer
********  ************** * .  ..

24. spacer 1.7|196516|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.719

tccgccatctggcgaaggatacggcgaccctg	CRISPR spacer
tcgaattgatggcgaaggattcggcgagcctg	Protospacer
** . .   *********** ****** ****

25. spacer 1.7|196516|32|NZ_CP035202|CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 9, identity: 0.719

tccgccatctggcgaaggatacggcgaccctg	CRISPR spacer
tgacccatgaggcgaaggatacggcgatcggc	Protospacer
*   ****  *****************.*

26. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
acgggcacgctcttcggcaaatcggaaaagca	Protospacer
 . *  **.************ ********

27. spacer 1.20|197310|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 9, identity: 0.719

ctctcaaccccggcggcgtgacccgaactcaa	CRISPR spacer
gtctcaagcccgacggcgtgacccgcgaagac	Protospacer
 ****** ****.************ .   *

28. spacer 1.20|197310|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 9, identity: 0.719

ctctcaaccccggcggcgtgacccgaactcaa	CRISPR spacer
cgctccagcccggcggcgtgacccgcgcggcg	Protospacer
* *** * ***************** .*   .

29. spacer 1.27|197737|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050844 (Klebsiella pneumoniae strain Bckp186 plasmid pBckp186, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcgcttgccagagattgacgatcg	CRISPR spacer
tcttttcagggcttgcctgagattgactggtt	Protospacer
  ******* ******* ********* . .

30. spacer 1.27|197737|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050830 (Klebsiella pneumoniae strain Bckp067 plasmid pBckp067, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcgcttgccagagattgacgatcg	CRISPR spacer
tcttttcagggcttgcctgagattgactggtt	Protospacer
  ******* ******* ********* . .

31. spacer 1.27|197737|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013712 (Klebsiella pneumoniae strain J1 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

aattttcagcgcttgccagagattgacgatcg	CRISPR spacer
tcttttcagggcttgcctgagattgactggtt	Protospacer
  ******* ******* ********* . .

32. spacer 1.4|196333|32|NZ_CP035202|CRISPRCasFinder,CRT matches to MN176226 (Bacillus phage 035JT001, complete genome) position: , mismatch: 10, identity: 0.688

aatttctgttccatgtcattaactcccatagc	CRISPR spacer
aatttctgaaccatgtcattaacgactggcat	Protospacer
********  *************  *..  ..

33. spacer 1.5|196394|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP022249 (Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence) position: , mismatch: 10, identity: 0.688

gtggaaatccacggtaaaaaaatcagaatttc	CRISPR spacer
accagaatcaacggtaaaaaaatcagaaaaag	Protospacer
.. ..**** ******************

34. spacer 1.5|196394|32|NZ_CP035202|CRISPRCasFinder,CRT matches to NZ_CP022249 (Staphylococcus epidermidis strain ATCC 12228 plasmid pAMT1, complete sequence) position: , mismatch: 10, identity: 0.688

gtggaaatccacggtaaaaaaatcagaatttc	CRISPR spacer
accagaatcaacggtaaaaaaatcagaaaaag	Protospacer
.. ..**** ******************

35. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.688

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
ggcggaacactcgtcggcaaaacggcctgtga	Protospacer
  ** ******* ************   . *

36. spacer 1.19|197249|32|NZ_CP035202|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039640 (Azospirillum sp. TSH100 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

ttcgcaacactcttcggcaaaacggaaaaggc	CRISPR spacer
ccggtcggcctcttcgtcaatacggaaaaggc	Protospacer
.. *. .  ******* *** ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32505 : 42103

Enterobacteria_phage(71.43%)

integrase

attL 27255:27269|attR 42470:42484

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
27255:27269	attL	NA	NA	NA	NA
WP_064145146.1\|32505_33726_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.6e-106	49.0
WP_064145147.1\|33722_34970_+	DUF3644 domain-containing protein	NA	NA	NA	NA
WP_133241610.1\|34985_35222_+	hypothetical protein	NA	NA	NA	NA
WP_077267019.1\|35203_36085_+	protein kinase	A0A1M7XUH0	Cedratvirus	3.5e-07	29.8
WP_064145149.1\|36302_36866_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.6e-56	62.8
WP_000984213.1\|36865_37126_-	transcriptional regulator	Q7M294	Enterobacteria_phage	6.4e-26	67.9
WP_064145150.1\|37122_37860_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	6.4e-79	63.7
WP_087786319.1\|37874_38078_+	hypothetical protein	NA	NA	NA	NA
WP_077267020.1\|38662_39214_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-30	70.4
WP_064145153.1\|39210_39438_+	hypothetical protein	NA	NA	NA	NA
WP_064145154.1\|39434_39755_+	hypothetical protein	NA	NA	NA	NA
WP_064145155.1\|39769_42103_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	83.0
42470:42484	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3069745 : 3079208

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|3069745_3070861_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|3070857_3072798_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|3072874_3073096_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|3073421_3073739_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|3073769_3076049_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|3076168_3076387_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|3076740_3077442_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_021441487.1\|3077486_3079208_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_3

3487696 : 3516106

Enterobacteria_phage(29.73%)

integrase,transposase,holin

attL 3488383:3488396|attR 3501119:3501132

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004140269.1\|3487696_3488506_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
3488383:3488396	attL	NA	NA	NA	NA
WP_004140266.1\|3488507_3489500_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_152650695.1\|3489499_3490390_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_096903177.1\|3490566_3491754_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	8.4e-121	52.4
WP_072031515.1\|3491650_3491965_-	hypothetical protein	K7PM28	Enterobacteria_phage	2.1e-10	50.8
WP_004892750.1\|3491974_3492214_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	8.0e-23	70.1
WP_016160778.1\|3492221_3492530_-	hypothetical protein	I6PD68	Cronobacter_phage	3.2e-24	56.9
WP_072201173.1\|3492526_3493183_-	hypothetical protein	M1F3E2	Salmonella_phage	9.1e-69	63.1
WP_032416140.1\|3493226_3494336_-	recombinase RecT	H6WRX0	Salmonella_phage	9.4e-183	85.9
WP_032416141.1\|3494348_3497447_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	2.4e-292	57.6
WP_020804294.1\|3497584_3497740_-	hypothetical protein	K7P7H7	Enterobacteria_phage	5.7e-14	71.2
WP_020804303.1\|3497748_3497940_-	YebW family protein	NA	NA	NA	NA
WP_022631176.1\|3498046_3498145_-	hypothetical protein	NA	NA	NA	NA
WP_032416142.1\|3498236_3498545_-	hypothetical protein	G8C7T6	Escherichia_phage	1.4e-24	61.2
WP_020805737.1\|3498828_3499032_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	6.3e-21	76.1
WP_016831735.1\|3499945_3500065_-	hypothetical protein	NA	NA	NA	NA
WP_136085610.1\|3500170_3500269_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_004190707.1\|3500286_3500682_-	helix-turn-helix transcriptional regulator	K7PM35	Enterobacteria_phage	3.1e-48	74.0
WP_029503646.1\|3500786_3501020_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-20	61.6
WP_032416144.1\|3501022_3501559_+	hypothetical protein	M9NZI6	Enterobacteria_phage	2.8e-60	68.3
3501119:3501132	attR	NA	NA	NA	NA
WP_032409425.1\|3501906_3502827_+	hypothetical protein	K7PGZ0	Enterobacteria_phage	2.8e-92	61.2
WP_032416145.1\|3502823_3503567_+	Replication protein P	A0A0M3ULE2	Salmonella_phage	4.1e-65	55.2
WP_016946299.1\|3503559_3503895_+	DUF977 family protein	H6WRX9	Salmonella_phage	4.4e-11	43.0
WP_032416146.1\|3503887_3504673_+	hypothetical protein	C7BGF1	Burkholderia_phage	9.6e-65	53.3
WP_020804603.1\|3504669_3504873_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.8e-26	84.8
WP_020804604.1\|3504865_3505120_+	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
WP_023286281.1\|3505116_3505338_+	hypothetical protein	A9YWV3	Burkholderia_phage	2.2e-11	49.4
WP_032416148.1\|3505341_3505770_+	hypothetical protein	NA	NA	NA	NA
WP_032416150.1\|3505865_3506165_+	hypothetical protein	NA	NA	NA	NA
WP_004184503.1\|3506916_3507150_+	DinI-like family protein	K7PM44	Enterobacteria_phage	2.9e-25	68.8
WP_072031516.1\|3507245_3507494_+	hypothetical protein	K7PHG9	Enterobacteria_phage	6.6e-28	69.1
WP_032416152.1\|3507528_3508125_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	3.5e-91	80.6
WP_019704503.1\|3508124_3508331_+	hypothetical protein	H6WRY8	Salmonella_phage	5.3e-23	72.3
WP_032416384.1\|3508333_3508630_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.9e-37	76.0
WP_152650696.1\|3508626_3508995_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.2e-40	62.9
WP_032416154.1\|3508991_3509774_+	molecular chaperone	F1C595	Cronobacter_phage	8.5e-114	78.7
WP_032416155.1\|3510090_3510537_-	hypothetical protein	NA	NA	NA	NA
WP_024940884.1\|3511149_3511449_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
WP_008807831.1\|3511445_3511985_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	1.5e-101	99.4
WP_004190674.1\|3511981_3512326_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_004190672.1\|3512322_3512598_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
WP_019405025.1\|3512548_3512743_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.4e-25	89.1
WP_152650697.1\|3513442_3514610_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.9e-178	96.1
WP_004218558.1\|3514808_3515054_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
WP_032416385.1\|3515182_3516106_-\|transposase	IS5-like element IS903 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4

DBSCAN-SWA_4

3790083 : 3800970

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|3790083_3790704_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004224682.1\|3790696_3791962_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
WP_064145463.1\|3791973_3792876_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.0e-158	99.3
WP_002210513.1\|3793136_3793898_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|3793918_3794779_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_004176262.1\|3795076_3795337_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620097.1\|3795423_3796512_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_064145462.1\|3796542_3797808_-	MFS transporter	NA	NA	NA	NA
WP_064145461.1\|3797862_3800970_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.5

DBSCAN-SWA_5

4750538 : 4758919

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040169196.1\|4750538_4751543_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.4e-31	29.5
WP_046960482.1\|4751611_4751806_+	hypothetical protein	NA	NA	NA	NA
WP_004144151.1\|4751942_4752065_+	small membrane protein	NA	NA	NA	NA
WP_020804124.1\|4752490_4753657_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	1.2e-111	54.7
WP_096912569.1\|4753837_4754392_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.3e-51	57.1
WP_065518763.1\|4754406_4755297_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-28	34.2
WP_032735999.1\|4755328_4756198_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.5e-111	66.7
WP_004189145.1\|4756224_4757289_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
WP_096912568.1\|4757512_4758919_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	8.0e-38	28.5

DBSCAN-SWA_6

4799473 : 4806378

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004149058.1\|4799473_4800952_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004175198.1\|4800948_4801671_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_096912558.1\|4801989_4803351_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.1e-206	94.5
WP_115376455.1\|4803596_4804490_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004180550.1\|4804730_4805504_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004175147.1\|4805514_4806378_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_7

5003629 : 5079561

Enterobacteria_phage(41.27%)

tRNA,capsid,protease,terminase,integrase,plate,head,holin,portal,tail

attL 5026407:5026422|attR 5063038:5063053

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015958766.1\|5003629_5004442_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_002913227.1\|5004441_5005455_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_002913228.1\|5005518_5006655_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.6e-20	27.8
WP_048993425.1\|5006765_5007743_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_004149211.1\|5007829_5009005_-	MFS transporter	NA	NA	NA	NA
WP_002913291.1\|5009215_5010436_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_032104830.1\|5010594_5012583_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_002913338.1\|5012644_5012926_-	YfcL family protein	NA	NA	NA	NA
WP_004185005.1\|5012957_5013506_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_002913340.1\|5013505_5014315_-	TSUP family transporter	NA	NA	NA	NA
WP_004174960.1\|5014314_5015139_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_002913342.1\|5015141_5016227_-	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-89	46.6
WP_002913346.1\|5016268_5017201_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_002913348.1\|5017368_5017920_+	endonuclease SmrB	NA	NA	NA	NA
WP_002913355.1\|5017940_5018426_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_064149809.1\|5018635_5020780_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_096912622.1\|5020779_5022090_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_002913359.1\|5022249_5022534_-	DUF406 family protein	NA	NA	NA	NA
WP_004149222.1\|5022901_5024230_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_002913362.1\|5024291_5025053_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_004899603.1\|5025342_5026272_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	5.2e-134	81.4
5026407:5026422	attL	NA	NA	NA	NA
WP_072617313.1\|5026597_5027755_+\|integrase	prophage integrase IntS	A5VW56	Enterobacteria_phage	8.2e-222	99.2
WP_072617314.1\|5027918_5028281_+	GtrA family protein	U5P0S6	Shigella_phage	7.3e-52	86.4
WP_072617315.1\|5028277_5029195_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	1.8e-131	77.2
WP_032419946.1\|5029202_5030675_+	hypothetical protein	A0A192Y7W8	Salmonella_phage	6.4e-38	29.4
WP_094316694.1\|5030704_5031106_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	2.7e-15	52.4
WP_152650711.1\|5031105_5032077_-	carbohydrate kinase	U5P0I1	Shigella_phage	6.3e-50	80.0
WP_072617318.1\|5032080_5032665_-	YmfQ family protein	O22003	Shigella_phage	5.4e-113	99.0
WP_152650712.1\|5032655_5033714_-\|plate	phage baseplate protein	M1FQW3	Enterobacteria_phage	1.2e-200	99.1
WP_000424732.1\|5033700_5034126_-	hypothetical protein	U5P0R9	Shigella_phage	2.3e-81	100.0
WP_001259084.1\|5034125_5034674_-\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	5.1e-97	98.9
WP_000999510.1\|5034673_5035753_-\|plate	baseplate protein	U5P0H6	Shigella_phage	5.3e-207	100.0
WP_134082275.1\|5035749_5037078_-	DNA circularization protein	Q8SBG8	Shigella_phage	2.9e-247	99.3
WP_072617320.1\|5037138_5038974_-\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	2.9e-306	99.3
WP_023147733.1\|5038966_5039149_-	hypothetical protein	NA	NA	NA	NA
WP_000661054.1\|5039115_5039385_-\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
WP_000090997.1\|5039384_5039741_-	hypothetical protein	U5P076	Shigella_phage	9.0e-63	99.2
WP_072617321.1\|5039740_5041237_-\|tail	phage tail protein	S5FKL0	Shigella_phage	4.4e-276	99.0
WP_000497751.1\|5041220_5041391_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_000779292.1\|5041399_5041960_-	hypothetical protein	M1FQV7	Enterobacteria_phage	1.0e-105	100.0
WP_000224835.1\|5041956_5042463_-	hypothetical protein	M1FPE2	Enterobacteria_phage	1.3e-83	92.9
WP_072617322.1\|5042437_5042848_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	1.8e-67	91.2
WP_000927719.1\|5042844_5043168_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	1.1e-56	99.1
WP_000601357.1\|5043170_5043371_-	hypothetical protein	S5FNU1	Shigella_phage	1.4e-25	95.5
WP_073546912.1\|5043419_5044625_-\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	2.7e-223	99.3
WP_001193632.1\|5044639_5045290_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	1.6e-118	99.5
WP_032252663.1\|5045267_5046509_-\|portal	phage portal protein	U5P411	Shigella_phage	1.3e-241	99.3
WP_000605606.1\|5046508_5046691_-	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-25	100.0
WP_072617324.1\|5046702_5048436_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	98.3
WP_072617325.1\|5048432_5048927_-\|terminase	phage terminase small subunit P27 family	A0A1B3B2F4	Salmonella_phage	5.1e-88	99.4
WP_040073295.1\|5049052_5049403_-	HNH endonuclease	Q8SBD7	Shigella_phage	6.2e-64	97.4
WP_121855891.1\|5049429_5049702_-	peptidase	Q8SBD8	Shigella_phage	1.8e-39	95.6
WP_040073296.1\|5049586_5049979_-	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	3.8e-54	86.2
WP_001570151.1\|5049962_5050439_-	glycoside hydrolase family protein	K7P7Y6	Enterobacteria_phage	7.5e-89	100.0
WP_000783734.1\|5050422_5050746_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_001377516.1\|5050856_5051039_+	hypothetical protein	A0A088CPS7	Enterobacteria_phage	1.2e-26	95.0
WP_001235461.1\|5051179_5051803_-	antitermination protein	K7PM87	Enterobacteria_phage	3.0e-114	100.0
WP_000994511.1\|5051799_5051988_-	protein ninH	A5VW84	Enterobacteria_phage	2.7e-26	98.4
WP_001008200.1\|5051984_5052347_-	RusA family crossover junction endodeoxyribonuclease	K7P6I9	Enterobacteria_phage	9.2e-63	100.0
WP_016063209.1\|5052343_5052634_-	DUF1364 domain-containing protein	K7PK25	Enterobacteria_phage	7.6e-52	100.0
WP_072617327.1\|5053348_5053519_-	protein ninF	A0A2I6PIG4	Escherichia_phage	1.6e-25	98.2
WP_001254251.1\|5053515_5053698_-	NinE family protein	Q716C5	Shigella_phage	1.3e-28	100.0
WP_000736907.1\|5053694_5054135_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	3.5e-80	99.3
WP_063080445.1\|5054208_5055585_-	AAA family ATPase	A0A0P0ZC27	Stx2-converting_phage	1.6e-253	99.8
WP_001608293.1\|5055581_5056403_-	replication protein	K7PJZ3	Enterobacterial_phage	2.0e-153	99.6
WP_000536662.1\|5056586_5056868_-	hypothetical protein	K7PMG0	Enterobacteria_phage	1.9e-44	100.0
WP_000067728.1\|5056984_5057200_-	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	8.2e-35	98.6
WP_001519589.1\|5057275_5057971_+	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	1.3e-129	96.5
WP_134083103.1\|5058251_5058638_+	antitermination protein	Q716D8	Shigella_phage	3.7e-54	98.2
WP_000597940.1\|5059182_5059431_+	hypothetical protein	K7P6N6	Enterobacteria_phage	1.6e-37	100.0
WP_000972063.1\|5059514_5059649_+	hypothetical protein	K7PHK2	Enterobacteria_phage	3.1e-16	100.0
WP_001243353.1\|5059633_5059786_+	host cell division inhibitory peptide Kil	K7P837	Enterobacteria_phage	4.7e-21	100.0
WP_000604110.1\|5059870_5060179_+	hypothetical protein	K7PJM4	Enterobacteria_phage	3.3e-53	99.0
WP_000065846.1\|5060175_5061078_+	recombinase RecT	K7PKG9	Enterobacteria_phage	5.2e-147	88.4
WP_072617329.1\|5061061_5061544_+	siphovirus Gp157 family protein	K7P6T5	Enterobacteria_phage	1.3e-77	97.5
WP_000753555.1\|5061555_5061870_+	hypothetical protein	K7PLT4	Enterobacteria_phage	1.2e-50	100.0
WP_000773125.1\|5061886_5062168_+	hypothetical protein	K7P7M4	Enterobacteria_phage	1.9e-44	98.9
WP_001214456.1\|5062164_5062329_+	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	1.1e-23	100.0
WP_098734117.1\|5062325_5062868_+	hypothetical protein	K7P7V4	Enterobacteria_phage	2.7e-58	71.7
WP_001163428.1\|5063072_5063273_+	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
5063038:5063053	attR	NA	NA	NA	NA
WP_050598596.1\|5064238_5064772_-	hypothetical protein	NA	NA	NA	NA
WP_135625064.1\|5064768_5065218_-	hypothetical protein	NA	NA	NA	NA
WP_071838925.1\|5066006_5066405_-	hypothetical protein	NA	NA	NA	NA
WP_064185938.1\|5066912_5067470_-	hypothetical protein	NA	NA	NA	NA
WP_096912623.1\|5067459_5068344_-	glycine zipper family protein	NA	NA	NA	NA
WP_049107563.1\|5070228_5070711_-	hypothetical protein	NA	NA	NA	NA
WP_117245140.1\|5071538_5072255_-	hypothetical protein	NA	NA	NA	NA
WP_096912627.1\|5072251_5072989_-	hypothetical protein	NA	NA	NA	NA
WP_023317120.1\|5073021_5073366_-	hypothetical protein	NA	NA	NA	NA
WP_050484908.1\|5073359_5073863_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.5e-18	40.0
WP_096912624.1\|5073859_5076181_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.7e-14	29.0
WP_032425135.1\|5076185_5076710_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_096912625.1\|5076745_5077828_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_096912626.1\|5077791_5079561_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP035203

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

49811 : 106666

Planktothrix_phage(16.67%)

integrase,transposase

attL 48736:48753|attR 66887:66904

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
48736:48753	attL	NA	NA	NA	NA
WP_014386529.1\|49811_50948_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004026552.1\|51013_51331_-	hypothetical protein	NA	NA	NA	NA
WP_004197568.1\|51481_51805_-	hypothetical protein	NA	NA	NA	NA
WP_048298751.1\|51801_52560_-	hypothetical protein	NA	NA	NA	NA
WP_048298752.1\|52556_53516_-	DNA replication protein	NA	NA	NA	NA
WP_004186937.1\|53558_53966_-	hypothetical protein	NA	NA	NA	NA
WP_020477096.1\|53975_54419_-	hypothetical protein	NA	NA	NA	NA
WP_093515582.1\|54439_55668_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	7.5e-141	79.1
WP_048298753.1\|55714_57307_-\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.1e-175	61.6
WP_048298754.1\|57337_57688_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-38	62.9
WP_048298755.1\|57684_58125_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.3e-18	59.0
WP_004117790.1\|60698_61670_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
WP_023287153.1\|61669_62836_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2
WP_071600414.1\|62791_63040_+	hypothetical protein	NA	NA	NA	NA
WP_072198301.1\|63254_63536_-	hypothetical protein	NA	NA	NA	NA
WP_017900946.1\|63565_64576_+	replication initiation protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
WP_023288364.1\|66896_67433_-	hypothetical protein	NA	NA	NA	NA
66887:66904	attR	NA	NA	NA	NA
WP_032413397.1\|70390_71335_-	ectoine utilization protein EutC	A0A1V0SL93	Klosneuvirus	7.8e-13	23.0
WP_032731846.1\|71331_72351_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_148662571.1\|72445_73171_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	6.8e-33	40.6
WP_032413390.1\|73275_74058_-	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	G9BWD6	Planktothrix_phage	1.7e-29	36.7
WP_048281129.1\|74072_74729_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
WP_032413447.1\|74725_75385_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
WP_032413386.1\|75509_76364_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
WP_032413385.1\|76555_77965_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	1.2e-12	24.8
WP_032413383.1\|78458_79649_+	ectoine hydrolase DoeA	NA	NA	NA	NA
WP_032413381.1\|79661_80660_+	N-alpha-acetyl diaminobutyric acid deacetylase DoeB	NA	NA	NA	NA
WP_032413379.1\|80706_81885_+	cystathionine gamma-synthase family protein	A0A1V0SL56	Klosneuvirus	1.5e-16	23.5
WP_032413377.1\|82021_82369_+	hypothetical protein	NA	NA	NA	NA
WP_071571073.1\|82929_83115_+	DUF2188 domain-containing protein	E8ZD70	Streptococcus_phage	1.3e-09	59.6
WP_032413443.1\|83827_84271_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_032413375.1\|84267_84738_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_017901409.1\|84847_85108_-	hypothetical protein	NA	NA	NA	NA
WP_152650719.1\|86235_87159_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
WP_004118832.1\|87393_89127_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
WP_049013026.1\|89134_90082_-	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	3.3e-11	23.0
WP_004152278.1\|90126_91731_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118227.1\|91743_92664_-	ABC transporter permease	NA	NA	NA	NA
WP_004118228.1\|92663_93512_-	ABC transporter permease	NA	NA	NA	NA
WP_049013025.1\|93508_94102_-	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004118840.1\|94098_95226_-	transporter substrate-binding protein	NA	NA	NA	NA
WP_152650719.1\|95620_96544_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
WP_049013986.1\|96836_99146_+	ATPase	NA	NA	NA	NA
WP_049013985.1\|99149_100466_+	ATP-binding protein	NA	NA	NA	NA
WP_049013984.1\|100462_102658_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_001261276.1\|104456_104687_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_049014623.1\|104683_105100_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_085955508.1\|105545_106666_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.4

DBSCAN-SWA_2

113237 : 180995

Enterobacteria_phage(21.74%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152650720.1\|113237_114161_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-171	96.7
WP_049013079.1\|114603_115173_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_049013078.1\|115231_115924_+	molecular chaperone	NA	NA	NA	NA
WP_049013075.1\|115938_118332_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_049013073.1\|118352_119372_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_064171841.1\|120258_120723_-	hypothetical protein	NA	NA	NA	NA
WP_142286066.1\|121431_122355_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.6e-172	97.4
WP_048298735.1\|122821_124687_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_072072824.1\|125740_126772_-\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_152650721.1\|126890_128115_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	9.5e-136	78.1
WP_048298731.1\|128557_129655_+	hypothetical protein	NA	NA	NA	NA
WP_048298730.1\|129701_131273_+	ATP--cob(I)alamin adenosyltransferase	NA	NA	NA	NA
WP_071993384.1\|131269_131542_+	zinc/iron-chelating domain-containing protein	NA	NA	NA	NA
WP_114139113.1\|133010_134145_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.8e-46	39.1
WP_152650715.1\|134185_135459_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	8.1e-146	81.4
WP_112162748.1\|137354_138278_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	2.1e-172	96.7
WP_077267131.1\|138836_138950_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.1e-09	78.4
WP_077267129.1\|139041_140640_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	4.3e-19	31.9
WP_000149431.1\|143122_144430_-	hypothetical protein	NA	NA	NA	NA
WP_000895052.1\|144426_146583_-	AAA domain-containing protein	K4I1H4	Acidithiobacillus_phage	5.2e-36	41.7
WP_000227969.1\|148300_149377_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_077267130.1\|149714_150080_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	3.8e-40	62.8
WP_012540252.1\|150297_150648_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	5.3e-23	50.9
WP_012540111.1\|150695_151058_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_064175016.1\|151075_152827_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_012540054.1\|152873_154163_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	4.6e-173	74.5
WP_012540118.1\|154175_154601_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.5e-51	71.4
WP_116397520.1\|154635_155172_-	N-acetyltransferase	NA	NA	NA	NA
WP_035897911.1\|155309_156233_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.6e-166	92.8
WP_003032889.1\|156603_156954_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.2e-19	53.3
WP_000790483.1\|157097_157529_-	silver-binding protein SilE	NA	NA	NA	NA
WP_049014823.1\|157779_159255_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	6.1e-28	30.1
WP_001572351.1\|159247_159928_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6
WP_000475512.1\|160117_161503_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|161531_161885_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_001485328.1\|161998_163291_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_048298744.1\|163301_166448_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	6.1e-62	22.6
WP_008322815.1\|166534_166975_+	hypothetical protein	NA	NA	NA	NA
WP_152650722.1\|167101_169549_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000843497.1\|169589_169787_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004118669.1\|169820_170558_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_001023257.1\|170846_171296_-	copper resistance protein	NA	NA	NA	NA
WP_048298742.1\|171529_173347_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_130943622.1\|173352_174243_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_040221028.1\|174282_174663_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_000998778.1\|174667_175597_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_009309896.1\|175651_176332_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	3.0e-30	34.8
WP_004152084.1\|176328_177729_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_048298741.1\|177944_178379_+	hypothetical protein	NA	NA	NA	NA
WP_049014828.1\|178790_178877_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_152650720.1\|180071_180995_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-171	96.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP035204

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP035202

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP035203

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection