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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045529 Luteimicrobium xylanilyticum strain HY-24 chromosome, complete genome 5 crisprs c2c9_V-U4,csa3,DEDDh,WYL,DinG,Cas9_archaeal,cas4,cas3 0 1 0 0

Results visualization

1. NZ_CP045529
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045529_1 332573-332663 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045529_2 3084713-3084803 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045529_5 3552398-3552477 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045529_4 3552194-3552289 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045529_3 3552008-3552109 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP045529_5 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder 3552421-3552454 34 NZ_CP018077 Sulfitobacter sp. AM1-D1 plasmid unnamed1, complete sequence 93049-93082 8 0.765
NZ_CP045529_5 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder 3552421-3552454 34 NZ_CP031079 Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence 206867-206900 9 0.735
NZ_CP045529_5 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder 3552421-3552454 34 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 322442-322475 9 0.735
NZ_CP045529_5 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder 3552421-3552454 34 NZ_CP029356 Azospirillum sp. CFH 70021 plasmid unnamed1 420420-420453 9 0.735
NZ_CP045529_5 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder 3552421-3552454 34 NC_009806 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence 175026-175059 11 0.676

1. spacer 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder matches to NZ_CP018077 (Sulfitobacter sp. AM1-D1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

catcccgcagggcatcggggcgctgctcgcgcgg	CRISPR spacer
caacggccagggcatcgcggcgctgatcgcgctc	Protospacer
** *   ********** ******* ******  

2. spacer 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 9, identity: 0.735

catcccgcagggcatcggggcgctgctcgcgcgg	CRISPR spacer
tgcccgccagggcatcgaggcgctggtcgcgcac	Protospacer
...**  **********.******* ******. 

3. spacer 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.735

catcccgcagggcatcggggcgctgctcgcgcgg-------	CRISPR spacer
catcccgcgcggcatcggggcgct-------cggctacacc	Protospacer
********. **************       ***       

4. spacer 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 9, identity: 0.735

catcccgcagggcatcggggcgctgctcgcgcgg	CRISPR spacer
cgggctgcacggcaccggggcgctgctcgccacg	Protospacer
*.  *.*** ****.***************   *

5. spacer 5.1|3552421|34|NZ_CP045529|CRISPRCasFinder matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 11, identity: 0.676

catcccgcagggcatcggggcgctgctcgcgcgg	CRISPR spacer
gggaaccgggggcatcggggagcagctcgcgcgt	Protospacer
 .   *  .*********** ** ********* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage