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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023319 Bacillus megaterium strain A plasmid p2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP023317 Bacillus megaterium strain A chromosome, complete genome 2 crisprs DinG,csa3,cas3,DEDDh,WYL 0 1 4 0
NZ_CP023318 Bacillus megaterium strain A plasmid p1, complete sequence 0 crisprs RT,csa3 0 0 0 0

Results visualization

1. NZ_CP023317
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023317_1 2798881-2799030 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023317_2 2799223-2799309 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP023317_2 2.1|2799248|37|NZ_CP023317|CRISPRCasFinder 2799248-2799284 37 AP014390 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C9, *** SEQUENCING IN PROGRESS *** 26128-26164 12 0.676

1. spacer 2.1|2799248|37|NZ_CP023317|CRISPRCasFinder matches to AP014390 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C9, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 12, identity: 0.676

cgatatcttttgctgtttttagcgtactaccaggtcg	CRISPR spacer
ttggaattttagctgtttctagcgtactaccagtagt	Protospacer
. . * .*** *******.**************    

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 226130 : 234392 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 2134283 : 2142497 7 Bacillus_virus(83.33%) NA NA
DBSCAN-SWA_3 4130057 : 4139363 8 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_4 4997599 : 5008064 8 Bacillus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP023319
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 13963 : 21684 8 Moumouvirus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage