CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP034550	Saccharothrix syringae strain NRRL B-16468 chromosome, complete genome	20 crisprs	PD-DExK,cas3,csa3,DinG,DEDDh,Cas9_archaeal,WYL,cas4	5	30	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034550_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_1

823431-823520

Orphan

Consensus_repeat	Method
CGAGGACCGCCCCAAGCGGCCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_1

>merge|NZ_CP034550|1|823431-823520|CRISPRCasFinder
CGAGGACCGCCCCAAGCGGCCCCGACCGGACGCCCCGGCCGAGCGCCGCCGCCCCGCCCCGGCCGACGAGGACCGGCCCAAGCGGCCCCG

>NZ_CP034550|1|1|823431-823520|CRISPRCasFinder
CGAGGACCGCCCCAAGCGGCCCCG	ACCGGACGCCCCGGCCGAGCGCCGCCGCCCCGCCCCGGCCGA
CGAGGACCGGCCCAAGCGGCCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033430456.1\|824976_825477_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_CP034550.1\|WP_033430461.1\|817761_820638_-\|SMC-family-ATPase	unknown	unknown	gnl\|CDD\|223496
NZ_CP034550.1\|WP_033430464.1\|813404_813683_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430452.1\|829170_830046_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP034550.1\|WP_084716321.1\|813858_815685_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP034550.1\|WP_033430460.1\|820634_821780_-\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|223497
NZ_CP034550.1\|WP_051765494.1\|810501_811446_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP034550.1\|WP_153278857.1\|831948_832983_+\|thiamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270263
NZ_CP034550.1\|WP_033430455.1\|826836_827916_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP034550.1\|WP_033430453.1\|828722_829100_+\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl\|CDD\|226180
NZ_CP034550.1\|WP_033430454.1\|827918_828485_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP034550.1\|WP_033430450.1\|831519_831819_-\|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl\|CDD\|376528
NZ_CP034550.1\|WP_051765492.1\|815773_816736_+\|DUF1883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP034550.1\|WP_033430457.1\|823979_824966_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153277860.1\|811604_813020_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP034550.1\|WP_033430462.1\|816742_817723_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430451.1\|830349_831564_+\|mannosyltransferase	unknown	unknown	gnl\|CDD\|172015
NZ_CP034550.1\|WP_051765513.1\|825473_826757_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|225080
NZ_CP034550.1\|WP_153277862.1\|821878_822814_+\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|376878
NZ_CP034550.1\|WP_153277861.1\|813074_813395_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033430456.1\|824976_825477_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.15874e-31
NZ_CP034550.1\|WP_033430461.1\|817761_820638_-\|SMC-family-ATPase	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	1.77184e-74
NZ_CP034550.1\|WP_033430452.1\|829170_830046_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	0.000811
NZ_CP034550.1\|WP_084716321.1\|813858_815685_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.65889e-78
NZ_CP034550.1\|WP_033430460.1\|820634_821780_-\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	5.38311e-48
NZ_CP034550.1\|WP_051765494.1\|810501_811446_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP034550.1\|WP_153278857.1\|831948_832983_+\|thiamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270263	cd13545, PBP2_TbpA, Substrate binding domain of thiamin transporter, a member of the type 2 periplasmic binding fold superfamily. Thiamin-binding protein TbpA is the periplasmic component of ABC-type transporter in E. coli, while the transmembrane permease and ATPase are ThiP and ThiQ, respectively. Thiamin (vitamin B1) is an essential confactor in all living systems that most prokaryotes, plants, and fungi can synthesized thiamin. However, in vertebrates, thiamine cannot be synthesized and must therefore be obtained through dietary absorption. In addition to thiamin biosynthesis, most organisms can import thiamin using specific transporters. After binding thiamine with high affinity, TbpA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The thiamine-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.37077e-98
NZ_CP034550.1\|WP_033430453.1\|828722_829100_+\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	1.46136e-21
NZ_CP034550.1\|WP_051765513.1\|825473_826757_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	4.49619e-56
NZ_CP034550.1\|WP_033430450.1\|831519_831819_-\|4a-hydroxytetrahydrobiopterin-dehydratase	gnl\|CDD\|376528	pfam01329, Pterin_4a, Pterin 4 alpha carbinolamine dehydratase. Pterin 4 alpha carbinolamine dehydratase is also known as DCoH (dimerization cofactor of hepatocyte nuclear factor 1-alpha).	2.87013e-32
NZ_CP034550.1\|WP_051765492.1\|815773_816736_+\|DUF1883-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	3.07511e-14
NZ_CP034550.1\|WP_033430455.1\|826836_827916_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP034550.1\|WP_153277860.1\|811604_813020_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	3.53238e-08
NZ_CP034550.1\|WP_033430451.1\|830349_831564_+\|mannosyltransferase	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	6.10498e-148
NZ_CP034550.1\|WP_033430454.1\|827918_828485_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.8504e-19
NZ_CP034550.1\|WP_153277862.1\|821878_822814_+\|DNA-recombination-protein-RmuC	gnl\|CDD\|376878	pfam02646, RmuC, RmuC family. This family contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures.	2.02954e-41

>NZ_CP034550.1|WP_153277862.1|821878_822814_+|DNA-recombination-protein-RmuC
MTAVLSTAAVVVALLLAGALLFLYRLYQDSVRRTDAALAAVAAERERGDAQWAALQRYEVAFSSVSGRGELGEQVLVETARVLGLRQGIHFELQVDVAGGGSVRPDMVLNVGGGRQVPVDAKMSMATWAEAVETDDATERADALRVHVRNIRARAAELAGKGYQRWADAIYGTIMFVPNDAAVVAALDTDPELLRWLLDRRVFLCGPTGFAVIASAAMFAVTDRALADDVEQVRAAAGRAHRAADGAIDAVNLSSTHLQRFLSARRRELDALEGFRAAVEPLSNASSGVTPLPLVRRADESLGAPLDAREA
>NZ_CP034550.1|WP_033430460.1|820634_821780_-|exonuclease-SbcCD-subunit-D
MRLLHTSDWHVGRTFHGRDLLREQESVLGGLADLVADERVDVVVVAGDLFDRAVPNAEAVAVCSRVLRRVREAGARIVVTPGNHDSAARLGFLGAFTEAGGLHLRTRAAELHDPVLFADAHGPVAVYGIPFLEPETARHALGVPDARGHAGVLTEAMRRVREDLAGRPGTRSVVLAHAFVTGGEPCESERTIAVGGVQDVSGSVFAGVDYAALGHLHGQQTLADHLRYSGSPVAYSFSEARHHKQVWLVELDAGGLAGVERRSLPVPRALSTLGGELEELLLEPAHEAVADHFLSVTLTDRVRPLDALRRLQARFPHAVHVEWRPAGGRTGELRFAERVRGRSDEEVACCFVEDVRGDRPGDRELALLREAFAAAAREGDS
>NZ_CP034550.1|WP_033430461.1|817761_820638_-|SMC-family-ATPase
MKLHRLAVSGFGPYAEREEVDFDLLGADGLFLLHGDTGAGKTTLLDAVAFALFGKVPGARGDVKRLRCDYASPDTPTFVELELTVRGRRFLVRRSPEYDRPKRRGGGVTRQQAQASLTWLAGWEGEGHTRIDDVAREVDALLGMTADQFFQVVLLPQGEFARFLRAETAEREKLLEKLFGTERFLDVEKWFREHRRERRQEVERLGLETRDLVQRVAEAAAEEPPAVADHEWLSSLLKRLDEDAREAGRRAGEVLARRDEAERAWQDARARDERVRRVREARRALDRYAEVEPDLRAWAAERDAARQAAVVVPAQAAAERLEAALGTAGARERAAADAVAALGYDGTDLRGDAERLREESGALTGLAAEALKQDDDRRRVAHLEQSITTATRDLAALVTQLDEVPARLAAHRSAVEEATLAAARLTRVAGLAAAAAELPRVEADFAAADEARRDAVDGHQRARDALLRVRQERLEGMAVELAGELRDGEACPVCGSAEHPAPARPAPGTVTAADEEAAAAGEQRAADRRSRAERAAQELGARLAHLREQLGENSPDELEREHRAVSALAGRLEQRQAALAELERQVADAQDRRVRLERDLERAGAQRDELVAAVAEREARLERARGDFPDVVARRAHLSDLADALTDLHARRVAVAEHEERLAEQRVEVSRLAAGAGFADVAEALAAARPDHVVTALEARVRDAEQTRAAAEGTLVELADVDPGTEVDVAGAEARFREATEVATRASGARDEAGRRAARAADLGGQLRAAWARAEPVQAAFDELDALTDVINGRGQNNRSMTLRTYVLAARLEEVAVAASARLERMSQGRYRFVHSVEAGPRGTRGGLGLDVLDDYSGLQRPAKTLSGGESFLASLALALGLSDVVAAGAVLDTLFIDEGFGTLDAETLELVMTTLDELRAGGRVVGLVSHVDELRQRIPTRLRVRKARAGSKLELTA
>NZ_CP034550.1|WP_033430462.1|816742_817723_-|hypothetical-protein
MLPKVLGVAVLALVLVRSGDLWHLVGDWWGGRLTGDSTVLGWKLRYWGRLGKSCQFTGGVTVVLKIIGPERFSEWSAAWEARRERALTAVEQAVAVYPLTALRQAMGTSLVRTRHYAIPEGGSWSREEVWTGGPPHVGTAPVDQAEVDAWHTAALTAVESAHGCAEPHHPEACPEQIAFARAAVDRFLRERLGPAEWNRVTALSTTVLNAPILFRASQAGVVILLMLAGGLYALRMASAPGTALLMLIVCAGAFALGLVVVGTEDPPRSRRDVAVFRRVVRLWTAPVAAAMRGLAILLVKARPGHAVEWFAFWAFLVGFGLDFLAS
>NZ_CP034550.1|WP_051765492.1|815773_816736_+|DUF1883-domain-containing-protein
MFEWLAENWQLLLVAETALLVLVLLRPAPNWRLLLRVGRGRDVRRAAGKPGRFWCTEPTRQPAGAVARVRLDGPAASVRLVDGPNYARMMRGRRYAYVGGWATGSPFELTVPWAGRWRVVGDLGSASGVLDMRVRWIAEELPPISVQPVNTEPHLGAVRDRGAADGVRDVFVLHVAEDRDEVARPLAEALRARGATVWLDEFELAIGDSLAKRLERGLACSRFGVVVLSPGFFEPTATGTPRVEGDQVVLPVLHRITRVEALEGLPWLADLVVRGTSDRTVDEIAEEIALVVLPDEAATEEEDDPEVVPGRVVPLRVGRR
>NZ_CP034550.1|WP_084716321.1|813858_815685_+|ABC-transporter-ATP-binding-protein
MSVSLGKALRSLPAAVAAVFRLAWATSPRLTLTAAAVHVVSGCVTAFGLLATADVFAALLRDGPTPDRLVRALPALAVVVGSFVVRALLDTAVAAVESSLRPRVTRAANDEVTAVLARARLLAFEDADFRELARQGGRRGVRSMESSLRYLADLLSGGISLVASVVTVGLLNPWLVPALLLAALANAWAAAKASKLRYEHFLDSVTRDTRKSVVEEVATDRDFALERTALTLQERLLAEYRRIADSLVGDEIRMAHRTNLVRLTGRALAGVGTGAAYLVLGLLLRTGAMELALAGTAVLAMRTGFSSLGNTTRAVNALYEDSFYIDFYRKLLVEGAARATRRSAVRPPADPAAIRLEGVSFTYPGGKQPALRDVDLTVARGEVVALVGENGSGKTTLGKVLTGLYPATSGTVRWDDVDLAVADEHAVHSSVAVIAQDPAQWPMTARHNVLVGRLERDDERAYLDAVGKSGADEVIASLPGGPDTVLSRRFNDGQDLSGGQWQRMGIARGTYRDAAVLVADEPTAALDARAEARVFEGLREATARRTTILVTHRLANIRNADRIVVLDRGRIVEQGTHEELMALRGHYHELFELQAAAYRGGLLAPSNE
>NZ_CP034550.1|WP_033430464.1|813404_813683_+|hypothetical-protein
MRGSAGIFGVVVVEVVVNAVTPFVVSRWGAAIALLAGAGWWLRRRPGVRARRELRRAVRRDLLRRAAVAEATREALAEVGRVAGEREAGRER
>NZ_CP034550.1|WP_153277861.1|813074_813395_+|hypothetical-protein
MSGGLQHLAAEAEMSPLMRTWGGLVLSREGRRLRAALRRRAVDEIVEQVDLVVAAGLAVDAMDAVKAVDDHRRAVAGGDERLNALLVRIELNHVERVDRIQRGRGL
>NZ_CP034550.1|WP_153277860.1|811604_813020_-|TetR-family-transcriptional-regulator
MADQGTRGWVRTQPRVTTISVTWDTHDGREATVRNPPPSRAKLLRAGREILLTAGRHVLLKGLTVSAVVERAGISETTFNNNWPTKVRNGVLGGHRKYIDDLLGSLVSDGPRITQDVLADRILQVFGENQGDPRRALRELARWDFEAVRDHPATLTRMLVATLARDHPVAVRSVRLVYDDITRKAARAYSSTLAGWGGEFRRPFTAESIAVVLTSLVEGMTLRWLLDPKAVPDELFGDAVTALVGAVVDVEQRHEHIDDVMEPLSREVIRKYRAEEDRDDPDDPWTAILEAAEGEFAQRGYYTTQLHHIAAAAGVDTAKLTRFFPTKADILEHGLRPVHDDLKRQVSHDALLRRGPEDVVRRHLRRLARAVARHRTWFDALVSLAIQDLARERDEAAARVRAALDFPALIAPALAAGQDAGVFVAVLPPDELATMLTNNVLVRAFSRCEHPPEEVAAAVGAVLLDGILVAP
>NZ_CP034550.1|WP_051765494.1|810501_811446_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MDKRVLLAKPRGYCAGVDRAVVTVEKALEQYGAPVYVRKEIVHNKHVVETLSARGAIFVDETDQVPEGALVVFSAHGVSPAVHREAADRNLRTIDATCPLVTKVHNEARRFAREDYDILLIGHEGHEEVEGTQGEAPEHIQLVDTAEDVDKVAVRDPSKVVWLSQTTLSVDETMVRVRQLKERFPDLQEPPSDDICYATSNRQTAVKTMAPECDLVLVVGSKNSSNSVRLVEVALQAGARAAHLVDYAREVDEAWLEGVTTVGVTSGASVPDILVMDLLAHLAERGYGQVEEITTANEKIAFALPRELRKDMVR
>NZ_CP034550.1|WP_033430457.1|823979_824966_+|hypothetical-protein
MDEMTPEPGTPDDRPPRLPGRGPARWWIATALGVVAAVVGVVLATDAARDAPPPDARVPDTGTRDAFGTGVATPEARPVADLVLRDGDTTRATGRVVAKDGGPFFCAPIAVDVDIPGRGPTCPLGVRVTGVGPMADAVQLEGVWRSGVLHVTGQSPSAPPSVSRPDLDHVPCAPPPGGWQPGGATDSLELGHYVNEHPDRFRMPRAAYPEGVPTATAAMGDAVVVLVVEVVSGDPTEAGRELRARHTGNLCVVDARGRMSMADQTRLQQQVDEVLRPLMDDQANGIFAAGGGGDRVHVDLVMVTPELAERFAPLGDGVELRPWLAPVR
>NZ_CP034550.1|WP_033430456.1|824976_825477_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MTTAHVSTIDTHIGPFTAVVAPDGAVLASGWTADPDDLLPQVSPSLRPTALTTRRDLGEVTRAVRAYHRGDLAAIDGVPVRQRAGEFTEQAWTALRAVPAGRTVSYAEYAGLAGRPAAVRAAASACAKNAATLFVPCHRVVRTGGATGAFRWGVEVKRRLLAHEAR
>NZ_CP034550.1|WP_051765513.1|825473_826757_-|DNA-3-methyladenine-glycosylase-2-family-protein
MLLDDERAYRAVAARDARFDGCFILAVRTTRIYCRPSCPAVTPKRRNAEFYPTAAAAQAAGYRACRRCLPDAVPGSPEWNLRADLAARAMRLISDGLVEREGVPGLAARLGYSERHLTRVLTAELGAGPLALARAHRAHSARLLIETTDLSFSDVAFAAGFASVRQFNDTIRAVFASTPSAMRAARPVTGPAGRITLRLPYRPPFDAAGLLAHFRAGAIPGVEHVTDTGYARSLRLPHGQATARLTPADGHVLCSLRLADLRDLGSAVSRVRRLLDLDADPVAVDGFLAADPELRPRVLSRPGVRLPGSVDGAETLLRALGHTGPGEPLEHPDGELTHLYPSPAAVDSPVARALADGTLRVDVGRDADELRAELAAFPGIGPDVASYVVMRVLGAPDTPLVDNPAWRPWRSYAAMHLMTTAHLGRAA
>NZ_CP034550.1|WP_033430455.1|826836_827916_+|redox-regulated-ATPase-YchF
MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDARLGRLAGIFSSEREVPATVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFADDDVVHVDGRVDPAADIETINTELILADLQTLEKAIPRLEKEARTAKDRRPALEAAQKAREVLDSGRTLFAAQSEVDGPLLRELSLLTTKPFLYVFNADESVLTDEARLKELRELVAPADAVFLDAKVEAELLELDEESARELLESIGQHEPGLHALARAGFHTLGLQTYLTAGPKESRAWTIPKGATAPQAAGVIHTDFERGFIKAEVVSFDDLVEAGSMAAARAAGKVRMEGKDYVMADGDVVEFRFNV
>NZ_CP034550.1|WP_033430454.1|827918_828485_-|Uma2-family-endonuclease
MTTLPGWMHPPREEGWLAEDLDHLHEAPRHTELIHGGLVFMLVPRRSGYSRAVHRLTCALEEQAPEGVVVEQEITIRLDAHNRPEPDIVVTAVPLDKDRTWHAPDDVLLVIEVVSPESAYRDRTVKPRKYAEAGIRHHWRVEEEDGEPVVHVCELDESTGAYRPVDVVRGTLHLQVPFEIKIDLPGLV
>NZ_CP034550.1|WP_033430453.1|828722_829100_+|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MSTVDYLTPDDLLTLAADLGVPQVRDPGLLDAAAHRPRSSLMGEDAYPDLREKAAVLMQSVLRNHPLVDGNKRLGWMSAFVFLGLNGLDLDAPEDDAYDLVIELATSAVDHSHAAARLAEWTRGK
>NZ_CP034550.1|WP_033430452.1|829170_830046_+|helix-turn-helix-domain-containing-protein
MAVEWTRRKARLGEFMKQLRDRVEPRLTSAEVGALTRSNRTTINRLENGLTLPNYHFVVALLGLYRASDEERERATRLYEAARGTGHRIRHVEGRPAKYVAFRKEEGIAVRERSLDRVAVPGPLQTGGYAAAVVDGAAEFAPGHPADWREQAVAERRDRRELLAGDRPLHLHALVDEAVLRRVVGGPAVMREQLDHLLREGRTRDNVTIQVVPFAAGAYGGMSGSAVILDADDEPGAVPTVYLEHAAGGEILDAAAQVDVFVRAFERLSREVALSPERSAELIVAACEALR
>NZ_CP034550.1|WP_033430451.1|830349_831564_+|mannosyltransferase
MGLRALEGRVSAVAPWVFGLSLLGHLAMVAFQTKMTMVDLMVYRNASPELFTGELYQWRLKEFSDQFALPFTYPPFSALVFVPLSWVPWAVARWVWQLVSLACLWFITRKSLDLVGSRDPRRALLWTGLFIWVEPVRTTLNYGQVNLVLAALLLGTVVSARAWRQGAGVGIAAGLKLTPAISGLYFLVTRQYRAAAWSVVAFAATVGVGYAVSPGQSTQFWFHLLGDAERVGPVGSAINQSLRGALSRTLGYDVQTGPVFLVAVAAAAVLAGFALRAAVRAGDTLAMVVTVQFLGLLVSPISWSHHWVWAVPALMWLLYGVRHRLAAIAAAAWLAAIGSYLISFLLNAQPSIWVVSRPWYYSALGWVYPAVGVLTLVTVAVVLRPRSGSRSPERVEDPVDLLRQ
>NZ_CP034550.1|WP_033430450.1|831519_831819_-|4a-hydroxytetrahydrobiopterin-dehydratase
MPKAELLTDDQVDAELTSLPAWRAQDAALVRTAELASFPQAIEVVNRVAEVAERDDHHPDVDIRWRTLTFRCSTHFAGGITALDVSLAQEIDRILDSLG
>NZ_CP034550.1|WP_153278857.1|831948_832983_+|thiamine-ABC-transporter-substrate-binding-protein
MLRRLLSTATAFALLTACSVTTNTGSSPQERVVTLVTHDSFAVPQGVLDAFKADTGITIRQLANGDAGEMTNKLVLTKDNPIGDVAYGVDSTFASRALKEDVFAEYASPEAGNGAQRYRLDPPNRLHAVDLGDVCLNVDVAALKDVGEPRQLADLTDPKYKDMLVVQDPATSSPGLAFLLGTVSTFGPEDWRDYWARLKANGVKVVSGWEEAYTQDFSGSSGKGPRPIVVSYASSPSAEIGEDGAPRTRALLDTCYRQVEYAGVLNNAKNPGDARKVVDFLLSEPFQAEVPGSMYVYPSREGVALPEAWAKAAPLPTASRSLPAEEVDANRERWVSEWRALVLG

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Crispr_ID: NZ_CP034550_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_2

1717534-1717639

Orphan

Consensus_repeat	Method
CGCCGGGTCGGCGGCTCGCCGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_2

>merge|NZ_CP034550|2|1717534-1717639|CRISPRCasFinder
CGCTGGGTGAGCGGCTCGCCCGTCGGCACCCGCCGGGTCGGCGGCTCGCCGCCGGCGACCCCGGGTTCCCCCGTCGGCACGCGCCGGGTCGGCGGCTCGCCACCGG

>NZ_CP034550|2|2|1717534-1717639|CRISPRCasFinder
CGCTGGGTGAGCGGCTCGCCCGTCG	GCACCCGCCGGGTCGGCGGCTCGCCGCCGGCGACCCCGGGTTCCCCCGTCGGCACG
CGCCGGGTCGGCGGCTCGCCACCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033427443.1\|1709454_1710375_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|379605
NZ_CP034550.1\|WP_051764319.1\|1708639_1709458_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379605
NZ_CP034550.1\|WP_153277940.1\|1727271_1727460_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427741.1\|1718764_1719088_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375793
NZ_CP034550.1\|WP_033427435.1\|1721962_1723456_-\|phytoene-desaturase	unknown	unknown	gnl\|CDD\|274273
NZ_CP034550.1\|WP_051764429.1\|1707308_1707632_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|188649
NZ_CP034550.1\|WP_033427441.1\|1711140_1711866_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP034550.1\|WP_084715945.1\|1719387_1721910_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173831
NZ_CP034550.1\|WP_033427428.1\|1730194_1730830_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427434.1\|1723458_1724526_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NZ_CP034550.1\|WP_033427433.1\|1724628_1725513_+\|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|273212
NZ_CP034550.1\|WP_033427439.1\|1712547_1713573_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|274155
NZ_CP034550.1\|WP_033427742.1\|1713817_1714828_-\|DUF2891-domain-containing-protein	unknown	unknown	gnl\|CDD\|378592
NZ_CP034550.1\|WP_033427430.1\|1727675_1728326_-\|DUF3153-domain-containing-protein	unknown	unknown	gnl\|CDD\|371485
NZ_CP034550.1\|WP_033427440.1\|1711888_1712401_+\|polyadenylate-specific-3'-exoribonuclease-AS	unknown	unknown	gnl\|CDD\|374562
NZ_CP034550.1\|WP_033427744.1\|1707655_1708612_+\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP034550.1\|WP_033427429.1\|1728431_1730111_+\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP034550.1\|WP_033427438.1\|1714891_1716280_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP034550.1\|WP_033427432.1\|1725448_1726381_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|184875
NZ_CP034550.1\|WP_033427442.1\|1710473_1710944_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377224

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033427443.1\|1709454_1710375_+\|sensor-histidine-kinase	gnl\|CDD\|379605	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain. MEDS is prototyped by DcmR and is likely to function with the PocR domain in certain organisms in sensing hydrocarbon derivatives. The MEDS domain occurs fused to Histidine Kinase and as stand-alone version. Sequence analysis shows that it is a catalytically inactive version of the P-loop NTPase domain of the RecA superfamily.	6.85292e-25
NZ_CP034550.1\|WP_051764319.1\|1708639_1709458_+\|hypothetical-protein	gnl\|CDD\|379605	pfam14417, MEDS, MEDS: MEthanogen/methylotroph, DcmR Sensory domain. MEDS is prototyped by DcmR and is likely to function with the PocR domain in certain organisms in sensing hydrocarbon derivatives. The MEDS domain occurs fused to Histidine Kinase and as stand-alone version. Sequence analysis shows that it is a catalytically inactive version of the P-loop NTPase domain of the RecA superfamily.	2.86143e-35
NZ_CP034550.1\|WP_033427741.1\|1718764_1719088_+\|hypothetical-protein	gnl\|CDD\|375793	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function. This is the C-terminal domain of unknown function found in actinomycetes such as M. tuberculosis Rv2175c. Rv2175c has a DNA binding activity and possesses a winged helix-turn-helix fold, furthermore it is identified as a substrate of the PknL kinase.	5.08631e-33
NZ_CP034550.1\|WP_033427435.1\|1721962_1723456_-\|phytoene-desaturase	gnl\|CDD\|274273	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP034550.1\|WP_051764429.1\|1707308_1707632_+\|hypothetical-protein	gnl\|CDD\|188649	cd09817, linoleate_diol_synthase_like, Linoleate (8R)-dioxygenase and related enzymes. These fungal enzymes, related to animal heme peroxidases, catalyze the oxygenation of linoleate and similar targets. Linoleate (8R)-dioxygenase, also called linoleate:oxygen 7S,8S-oxidoreductase, generates (9Z,12Z)-(7S,8S)-dihydroxyoctadeca-9,12-dienoate as a product. Other members are 5,8-linoleate dioxygenase (LDS, ppoA) and linoleate 10R-dioxygenase (ppoC), involved in the biosynthesis of oxylipins.	0.00327631
NZ_CP034550.1\|WP_033427441.1\|1711140_1711866_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.95634e-48
NZ_CP034550.1\|WP_084715945.1\|1719387_1721910_-\|hypothetical-protein	gnl\|CDD\|173831	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze a head-to-head (HH) (1'-1) condensation reaction. This CD includes squalene and phytoene synthases which catalyze the 1'-1 condensation of two 15-carbon (farnesyl) and 20-carbon (geranylgeranyl) isoprenyl diphosphates, respectively. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DXXXD) located on opposite walls. These residues mediate binding of prenyl phosphates. A two-step reaction has been proposed for squalene synthase (farnesyl-diphosphate farnesyltransferase) in which, two molecules of FPP react to form a stable cyclopropylcarbinyl diphosphate intermediate, and then the intermediate undergoes heterolysis, isomerization, and reduction with NADPH to form squalene, a precursor of cholestrol. The carotenoid biosynthesis enzyme, phytoene synthase (CrtB), catalyzes the condensation reaction of two molecules of geranylgeranyl diphosphate to produce phytoene, a precursor of beta-carotene. These enzymes produce the triterpene and tetraterpene precursors for many diverse sterol and carotenoid end products and are widely distributed among eukareya, bacteria, and archaea.	1.23031e-77
NZ_CP034550.1\|WP_033427434.1\|1723458_1724526_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	1.81922e-70
NZ_CP034550.1\|WP_033427433.1\|1724628_1725513_+\|5,10-methylenetetrahydrofolate-reductase	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	1.3152e-113
NZ_CP034550.1\|WP_033427439.1\|1712547_1713573_+\|6-phosphofructokinase	gnl\|CDD\|274155	TIGR02483, ATP-dependent_6-phosphofructokinase_1, phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal. [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP034550.1\|WP_033427742.1\|1713817_1714828_-\|DUF2891-domain-containing-protein	gnl\|CDD\|378592	pfam11199, DUF2891, Protein of unknown function (DUF2891). This is a bacterial family of uncharacterized proteins.	8.5737e-141
NZ_CP034550.1\|WP_033427430.1\|1727675_1728326_-\|DUF3153-domain-containing-protein	gnl\|CDD\|371485	pfam11353, DUF3153, Protein of unknown function (DUF3153). This family of proteins with unknown function appear to be restricted to Cyanobacteria. Some members are annotated as membrane proteins however this cannot be confirmed.	0.00260443
NZ_CP034550.1\|WP_033427440.1\|1711888_1712401_+\|polyadenylate-specific-3'-exoribonuclease-AS	gnl\|CDD\|374562	pfam16473, DUF5051, 3' exoribonuclease, RNase T-like. This is a highly divergent 3' exoribonuclease family. The proteins constitute a typical RNase fold, where the active site residues form a magnesium catalytic centre. The protein of the solved structure readily cleaves 3' overhangs in a time-dependent manner. It is similar to DEDD-type RNases and is an unusual ATP-binding protein that binds ATP and dATP. It forms a dimer in solution and both protomers in the asymmetric unit bind a magnesium ion through Asp-6 in UniProtKB:P9WJ73.	3.10265e-16
NZ_CP034550.1\|WP_033427744.1\|1707655_1708612_+\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	1.10077e-70
NZ_CP034550.1\|WP_033427429.1\|1728431_1730111_+\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	0
NZ_CP034550.1\|WP_033427438.1\|1714891_1716280_+\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP034550.1\|WP_033427432.1\|1725448_1726381_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	9.80411e-14
NZ_CP034550.1\|WP_033427442.1\|1710473_1710944_-\|hypothetical-protein	gnl\|CDD\|377224	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily. This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.	2.92521e-05

>NZ_CP034550.1|WP_033427438.1|1714891_1716280_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MNWTVDVPVDTLPELPPLPPEMRSRLDDALGRPAAQQPEWPDAEQVRRVRAVLESVPPITVPAEIDRLRENLAEVARGEAFLLQGGDCAETFADNTEPHIRANVRTLLQMAVVLTYGASLPVVKIGRIAGQYAKPRSSGIDALGLPSYRGDIVNSLVPTPEARVPDPSRMIRAYANAGAAMNLLRAMTTAGMADLHRLHDWNKDFVRTSPAGERYEALAGEIDRGLRFMSACGVNDMSLHTTEIFASHEALLLDYERALLRLDTNGDQARLYDLSSHFLWIGERTRQLDGAHIAFAELLSNPIGLKIGPTTTPEMAVEYVERLDPHNQPGRLTLISRMGNSKVRDVLPPIVEKVTASGHQVIWQCDPMHGNTHESSTGYKTRHFDRIVDEVQGFFEVHRRLGTHPGGIHIELTGEDVTECLGGAQEISDTDLAGRYETACDPRLNTQQSLELAFLVAEMLRS
>NZ_CP034550.1|WP_033427742.1|1713817_1714828_-|DUF2891-domain-containing-protein
MPDTRLDDGTAARLLSVAVENVQRDHPVHWTHVIADDAGLVPQRVLHPIFAGSFDWHSCVHQTWLAVRLLRLRPGLDGAEEARRVLDSLITPENARVEAEFFTGPSGGFWERPYGWAWLLVLDAELRTWGSPWAVALRPLSEVLRERFLVKVAGARLPVRTGTHGNTAFATGLVLDAARAVGDEELAAACAAAALRWHREDAGYGGFEPDAADFLSPALTEADLMRRVLPPDEFTAWFDAFLPDLEEARWKVLREPAPVDDPSDPHGSHLVGLALSRAWQWRAIADALPPSHPHTDLARTAAEAHATTGLHQVLGHGYYAEHWLGTFATYLHLAAH
>NZ_CP034550.1|WP_033427439.1|1712547_1713573_+|6-phosphofructokinase
MRIGVLTGGGDCPGLNAVIRGVVRKGIEVHGWDVLGFRNGWQGPIENLTKPIGLADVEDILTRGGTILGSSRTNPYKVEGGVDKIRQVLKDNGVDALIAIGGEDTLGVAKRLTDDGIGVVGVPKTIDNDLGATDYTFGFDTAVHIATEAIDRLRTTAESHHRALVVEVMGRHAGWIALHSGLAGGANVILVPERQFSVDKVVEWVERRFEAQYAPIIVVAEGAIPEGGAEVLHSGEKDAFGHVRLGGVGTWLAEEIAERTGKESRAVVLGHVQRGGIPTAYDRVLATRFGLHAVDAVAEGDFGVMVALKGTDIVRVKLSEATAELKTVPLERYQEAEVFFG
>NZ_CP034550.1|WP_033427440.1|1711888_1712401_+|polyadenylate-specific-3'-exoribonuclease-AS
MRFFYDCEFIEDGVTIDLVSIGVVDEEGREFYAVSTEFDPAKAGPWVRANVLNQLPPPADRSWRSRERIRTDLLDFLGGPKANRDDVELWAWFAAYDHVALAQLWGPMPALPRCLPRFTRDLRQRWEDVGRPRLPQPPADAHDALADARHNLARWKVIEAERLKRGFPVR
>NZ_CP034550.1|WP_033427441.1|1711140_1711866_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MLYWLMKHIFLGPLLNLFFRPKIIEGAENIPAEGGAILASNHLAVSDSFFLPLKLSRRVTFPAKIEYFTGKGFKGAFKRWFFSGVGQVPIDRSSASAAQSALDTGVRIVREGKLLGIYPEGTRSPDGRLYKGKVGVAWIALESGAPVIPVAMFGTDKANPIGSKMWRPYPIRIKIGKPLDFSRYAGLSGDRFVLRSITDEIMYALMELSGQEYVDVYAAKAKEAPRDGADRPDRLPEAKAG
>NZ_CP034550.1|WP_033427442.1|1710473_1710944_-|hypothetical-protein
MNSRRDSTDGPEDVDATFAEIVAGLEREGVGKRTWADDEDDAAEDVAAEEAEPARPVRPEGQPAVATAEEGDEESDEHYVPPEPPPLPALRPGTIAALLLILLGVVVLLFPGLFGLTGSVGTPLALIVMCSGVGWLVLRIRNGPPPDSGWDDGAVL
>NZ_CP034550.1|WP_033427443.1|1709454_1710375_+|sensor-histidine-kinase
MRTGAARDHVGYYHETAFYGSDTEFQALVVPFLDEGVAAGEPVLVACCETNERLLRDRVADVSGIRFLPGADHYSRPTDAILTYRKLFAEYSGAPQIRVVGDVPHPGVGAAWDWWSRYEAAVNEVFGDYALWGLCPYDLRTTPPGVVADVLHAHPHVAGVGANPDYLGSWTWPDPVPDPLEAEPPLVDLGDPSPAEARHAVSAACVATRLLRDELDDIIYAASEAVTNAITHGKPPVRLRVWADAEHVVVAVSDRGEGPGSPVVGLVPTSQTTSAGLGLWLTHRTCRGVSMYRDANGYTIRLVVGG
>NZ_CP034550.1|WP_051764319.1|1708639_1709458_+|hypothetical-protein
MRTSGVLGATRGLGLHDHICWPYEDPEEFRARVLEFLADGLVLGQQCWYVSEGPTEVLTSHVAELGPALESGALRVVSVDETYGGATVTPAGQVATYAAATEAALAAGYAGLRVAAEATPMVRGDEALEAFCRYEHLVDRYMAGRPFAAMCAYNRAELPEAAIGELACMHPASGADAAPFRLYAASGDRVALDGELDLASRERFPRALDRVGLSAGTGPVVVEAAELEFIDHHAMFALARAAGGEVVLRTRHRAPARLAELVRVPGLRVEAE
>NZ_CP034550.1|WP_033427744.1|1707655_1708612_+|ROK-family-glucokinase
MDVGGTSVRAGVVDGDGAVLDTARAATPGDEEALEEAIGAAVAELASRHPVAAVGLAVAGFVAADRRTVRFAPHLAWRQAPVADRITRRVGMPVVLEHDANAAALAEYRFGAARGARIAVLVALGTGIGGALLVDGEVFRGAHGVAPELGHLRLVPGGRPCPCGKHGCWERYCSGTALSTTAVELLARHPGVSTVLAREAGADPGAVTGRRVAGAARDGDPLALRAMAELARWLGDGLALVADVYDPEVVVIGGGVSESAPLFLDDARERYAEVVTGAGHRPLARIRTAQLGDDAGIVGVASLARDVAARTSRNGRIR
>NZ_CP034550.1|WP_051764429.1|1707308_1707632_+|hypothetical-protein
MDPKLAEELRLLLDAAAERAQPWLHRVAEQGATGHDPGACGWCPLCNAVALVRGDRSELAAKAAEHLVGLIAVLRAALAEPAAPAPASEEPARPRVQHIPVVRRNQC
>NZ_CP034550.1|WP_033427741.1|1718764_1719088_+|hypothetical-protein
MEVLNLPEVAERLGLPINRVHQLLRDGQLLAERRNGVLVVPAQFLAAGGVVKGLPGTITVLRDSGYSTEEILRWLFTEDDTLPGTPIEALRGDRGREVKRRAQALGF
>NZ_CP034550.1|WP_084715945.1|1719387_1721910_-|hypothetical-protein
MWSLARVRPPCDDPPGRRDDDTGPAHHVPARPAVVRRCSGDGRDPLPIERRTCRPGAVVGYPGTGPAGPRRHPDPHHPARRGGRHAARAGRHGRGRGPQARPADRRHLAELDPLRPRPRPGHRRALPRPGPGDLVVGPAGPDGAQPARRQPRRAHRGGGLDAAAAVRAAAVQQGHLQLPGAGPAQAQRPGPLLGGPGGAAEPAVGERQLGLAEHPGPVRAAVPDARRGRRVGHRRQRDRRRGAHALRPGVRPGAAVLVAARPDQAPGRAARDRAVAGRGEPADAGAPHRRRAQRPADGGLDGRGRAAGARPQARPRPGRGDAGVRGEGHRRGRAAVPGAGVGAAAARHAQRAAGPGRRGRRGGVRAGVRGHHAGVRVGPGLGARAQLVLDHRELAVAAQRGRRLRAHRGQLLRPGRADLVHDRRPRPGLAAAGLHRVAAVAGGGGRRRGGRAAGGDHHAGGGAAVPGHAALVLQLGAGAGRGLRLDHHGPEGGGVLLHLAAAGHLPQRRHGPVLLGLPGAGHGGVRAGVRDADQARPAEAVRQVHVTDLAAAYARCRELNARHGRTFFLATRLLPPARRPAVHALYGFARWADEIVDGGEVEDPAAELDLLGKQLAEELAGHPTGHPVLAALADTADRHSIDHGLFADFLASMRMDLHVRSYPDFAALDRYVHGSAAVIGLQLLPVLGTVVPRAEAEPSAAALGRAFQLTNFLRDVGEDLDRGRVYLPEDVLAAHGVDRELLLAGRRTGRVDQRVRRALRHLVAHTLAVYREAEGGVALLAPAARPCVRTALVLYRGILDEIAAADYRVLDRRVAVPASRRLAVALPGLARALVARATGR
>NZ_CP034550.1|WP_033427435.1|1721962_1723456_-|phytoene-desaturase
MRVVTGRTDHVVVVGAGLAGLSAALHLLGAGRRVTVVERDAVPGGRAGRLDLGGYRFDTGPTVLTMPELVDEALHAVGESLGDRLDLRPVDPAYRARFADGSTLDVHADAGAMEAEVRRFAGPREAAGYRELRRWLTRLYRVERDAFIGANFDSPLDLLTPRLAELAALRGFARLEPSVARFLSDERLRRVFTFQSLYAGVPPHRALAAYAVIAYMDTVAGVYHPEGGMRALPDALAAAAQDAGAEFRYRTRVAWLERIGGRVTAVRTARGERIPCDAVVLTPDLPTSYRLLGHRPRRPLPITWSPSAVVLHAGVTRTWPELAHHTVFFGAAWRRTFDELTRRGTLMSDPSLLVTAPPGQGLFVLAPAPNLRTSAIDWERVGPAYREELVRTLEARGLTGFGSAIEVERLVTPRDWAARGLAAGTPFSAAHTFAQTGPFRPRNLVLDNAVLAGCGTTPGVGVPPVLVSGRLAAQRITGAVGAAARRPVVGRRSRTRR
>NZ_CP034550.1|WP_033427434.1|1723458_1724526_-|polyprenyl-synthetase-family-protein
MPPHPLDLELPKHVDTALAGYLADRRALGERMEGNFTGAVDALADFVLGGGKRIRPTFAWWGWRAAGGDPDDELAGAVLTAVSSLELIQACALVHDDLMDASETRRGRPTVHVRFARDHRERGWLGAPERFGLAAAVLIGDVALAWADDMLFAAGLPTDALQRLSLPWRDMRTEMLAGQYLDVLTQARGDASPDAALRIDRLKTAAYTVERPLHMGAAIGAGSPELVAGLRSFGADIGVAFQLRDDLLGVFGDPAVTGKPAGDDLREGKRTLLVALGMEYGADVLHDALGRPDLDEATVAVARDQLERVGAVAAVEERIGELTESALRALDRAPVAEPAADRLAELAISATKRTY
>NZ_CP034550.1|WP_033427433.1|1724628_1725513_+|5,10-methylenetetrahydrofolate-reductase
MTSVVERLSGDKPVFSVEFFPPRDPADEAVLWRAIRELEPLDPAFVSITYGAGGSTRDRTIRTTGRVVQETTLVPMAHLTAVDHSVAELRNVIGWYAAVGVRNILAVRGDPPGDVNGEWVRHPEGLNYAEELVRLCRELGDFCVGVAAFPYGHPRSADLDEDTRYLVRKLRAGADFAIAQLFLDADDFLRLRDRVAAVGCDTVLLPGLMPLTTRRTLAKTVELSGAPVPAAVARRLEPFLDDPVAFRAEGVDLVTEMGQRLLAEGVPALHFYTFNRSKATREVVGRLGLVPARA
>NZ_CP034550.1|WP_033427432.1|1725448_1726381_-|alpha/beta-fold-hydrolase
MKGVGGFRDEAARARYSAAYERAMAECPAPDAVHDVDTRHGTTRVYRFGSGDAPPLVLLPGLMATTASLADLIPAFAAHHPVHAVDTLGEAGRSVQTAPLVDHRDRAACLDDVLDRLGLTGVHLVGGSTGGWHAVNQAIHAPDRLASISLLDPTAVTAGFSRRLVLHGAVAALVDREWLWRRWLRRAAGADLLDRPDTRLVLTAIRTYRARLPFQTRPAEDAIRSLRVPVLAVFAGRSAVHDPVAAADRLRAPLPAAEVGVLPELGHHPSLRADERDAFTGRVLAFIRRVTRERAPGPADRPPRASPSTG
>NZ_CP034550.1|WP_153277940.1|1727271_1727460_-|hypothetical-protein
MGLTDAVTRMGEHGVPAELWARADAAFTEKEPADPPALIIGVNGLNRLAVALESATERRLGA
>NZ_CP034550.1|WP_033427430.1|1727675_1728326_-|DUF3153-domain-containing-protein
MPRASALLLPVLLLAAFTLTGCVRLHAAMAVSQDDRVSGEITAATPPTRDNDPGPQLKVPEELAGRVTTKPYQLDDYVGTQLSFSALTFDEVRALSVATSASSSRYQLTFRRSGDLVTLSGSVDLTQVPPERADIQVKISFPGEVVDTNGREEDNATIGWTPKPGQASMLTATVRYAGPNSVSYFGWAMLVAGLTGGAALIVLVLAVVSHRRGLVS
>NZ_CP034550.1|WP_033427429.1|1728431_1730111_+|DUF885-domain-containing-protein
MATSPAGVHGISNQFVADTAAADPLTATFIGKPGHDDRLTDFSPEGHAARLELARRALAEVAAAEPADGSEVDAKAVFLERVGLEVELHEAGLTASNLNVIASPVQSLREVFDLMPTETADDWAVIAKRLAAVPEALAGLRAGLAHAADGGRVAALRQVTRVAAQCDTWSGRAGGGSFFARMVAGAPAGAALRTDLEAGATAAAQAYGDFADFLRADLAPRAPEKDAVGEDVYRLQSRYFTGSRLDLAEAYEWGWAEFARVETEMKQVANRIEPGATLAGAAAALDANPRYLVRGKDGLQAWMQDLSDKALLDVRGVHFDLPDELMRLECRIAPPGGGVGAYYTGPTPDFSRPGRMWWSVPADKEEFSTWREVSTVYHEGVPGHHLQVATAVHQAEKLNEFQRLLCWVSGHGEGWALYAERLMRELGYLEDDGDLLGMLDAHLFRAARVIIDIGMHLELEIPKGTGFHEGERWTPELGLEFMLTRTITDPAHVRDEIDRYLGWPGQAPSYKLGERLWLAARDEARARHGASFDLKTFHSRALEMGAMGLDTLRERLAQI
>NZ_CP034550.1|WP_033427428.1|1730194_1730830_+|hypothetical-protein
MTRRPVRSALGAVLAGALLLGASPVVAQAQPGAVADRDQWRIRQDIVDHALREVGQREGRGNYYPQKYQDAGGPGVLRPAEWCGVFVNWAWTTAGVPVRPSMRPEAGASVLDQGHWATYWQKWGRANGRWKDIGEREVAPGDAVVYGNYPDMHAHVGLVVEVKYDRTGRKATHVRTVEGNFGDRVVYSKLRPIDGLNAGRFLKATGFVSPF

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Crispr_ID: NZ_CP034550_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_3

2070542-2070630

Orphan

Consensus_repeat	Method
CTCGACCCCGCGCACGCGGGGGTGTTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_3

>merge|NZ_CP034550|3|2070542-2070630|CRISPRCasFinder
CTCGACCCCGCGCACGCGGGGGTGTTCCGTCCAACTTCTCTTGCTCGATGTCCTTGTCGCTCTCGATCCCGCGCACGCGGGGGTGTTCC

>NZ_CP034550|3|3|2070542-2070630|CRISPRCasFinder
CTCGACCCCGCGCACGCGGGGGTGTTCC	GTCCAACTTCTCTTGCTCGATGTCCTTGTCGCT
CTCGATCCCGCGCACGCGGGGGTGTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_153277972.1\|2071233_2071464_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376564
NZ_CP034550.1\|WP_033433668.1\|2080842_2081376_+\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|143628
NZ_CP034550.1\|WP_033433663.1\|2073836_2075195_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133042
NZ_CP034550.1\|WP_153277970.1\|2064096_2066253_-\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|224588
NZ_CP034550.1\|WP_033433658.1\|2060694_2062356_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP034550.1\|WP_033433667.1\|2078740_2079916_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951
NZ_CP034550.1\|WP_153277973.1\|2076465_2077737_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
NZ_CP034550.1\|WP_033433692.1\|2057530_2060689_-\|helicase	unknown	unknown	gnl\|CDD\|350172
NZ_CP034550.1\|WP_084716865.1\|2067435_2068068_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379352
NZ_CP034550.1\|WP_033433660.1\|2066249_2067236_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766537.1\|2072708_2073815_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274251
NZ_CP034550.1\|WP_033433662.1\|2068061_2068292_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153277969.1\|2063484_2063676_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766538.1\|2080421_2080853_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142
NZ_CP034550.1\|WP_033433664.1\|2075201_2076419_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP034550.1\|WP_084716867.1\|2079819_2080413_+\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|225188
NZ_CP034550.1\|WP_084716873.1\|2062671_2063193_+\|DNA-mismatch-endonuclease-Vsr	unknown	unknown	gnl\|CDD\|238136
NZ_CP034550.1\|WP_033433666.1\|2077729_2078704_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187557
NZ_CP034550.1\|WP_153277971.1\|2067232_2067439_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033433657.1\|2055749_2057534_-\|DUF1998-domain-containing-protein	unknown	unknown	gnl\|CDD\|378167

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_153277972.1\|2071233_2071464_-\|hypothetical-protein	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	0.000338424
NZ_CP034550.1\|WP_033433668.1\|2080842_2081376_+\|CYTH-domain-containing-protein	gnl\|CDD\|143628	cd07890, CYTH-like_AC_IV-like, Adenylyl cyclase (AC) class IV-like, a subgroup of the CYTH-like superfamily. This subgroup contains class IV ACs and similar proteins. AC catalyzes the conversion of ATP to 3',5'-cyclic AMP (cAMP) and PPi. cAMP is a key signaling molecule which conveys a variety of signals in different cell types. In prokaryotes, cAMP is a catabolite derepression signal which triggers the expression of metabolic pathways including the lactose operon. Six non-homologous classes of ACs have been identified (I-VI). Class IV ACs are found in this group. In bacteria, the gene encoding Class IV AC has been designated cyaB and the protein as AC2. AC-IV occurs in addition to AC-I in bacterial pathogens such as Yersinia pestis (plague disease). The role of AC-IV is unknown but it has been speculated that it may be a factor in pathogenesis, perhaps providing cAMP for a secondary internal signaling function, or for secretion and uptake into host cells, where it may disrupt normal cellular processes. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	1.25377e-14
NZ_CP034550.1\|WP_153277970.1\|2064096_2066253_-\|cell-division-protein-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	2.19704e-09
NZ_CP034550.1\|WP_033433658.1\|2060694_2062356_-\|hypothetical-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	8.7032e-06
NZ_CP034550.1\|WP_033433667.1\|2078740_2079916_+\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.63118e-44
NZ_CP034550.1\|WP_153277973.1\|2076465_2077737_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.62743e-16
NZ_CP034550.1\|WP_033433692.1\|2057530_2060689_-\|helicase	gnl\|CDD\|350172	cd18785, SF2_C, C-terminal helicase domain of superfamily 2 DEAD/H-box helicases. Superfamily (SF)2 helicases include DEAD-box helicases, UvrB, RecG, Ski2, Sucrose Non-Fermenting (SNF) family helicases, and dicer proteins, among others. Similar to SF1 helicases, they do not form toroidal structures like SF3-6 helicases. SF2 helicases are a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Their helicase core is surrounded by C- and N-terminal domains with specific functions such as nucleases, RNA or DNA binding domains, or domains engaged in protein-protein interactions. The core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	1.6592e-06
NZ_CP034550.1\|WP_084716865.1\|2067435_2068068_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379352	pfam13730, HTH_36, Helix-turn-helix domain.	1.029e-10
NZ_CP034550.1\|WP_084716867.1\|2079819_2080413_+\|DUF402-domain-containing-protein	gnl\|CDD\|225188	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only].	3.23024e-11
NZ_CP034550.1\|WP_051766537.1\|2072708_2073815_+\|radical-SAM-protein	gnl\|CDD\|274251	TIGR02668, moaA_archaeal, probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666). [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	3.62042e-17
NZ_CP034550.1\|WP_051766538.1\|2080421_2080853_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	4.94359e-43
NZ_CP034550.1\|WP_033433664.1\|2075201_2076419_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.14327e-41
NZ_CP034550.1\|WP_084716873.1\|2062671_2063193_+\|DNA-mismatch-endonuclease-Vsr	gnl\|CDD\|238136	cd00221, Vsr, Very Short Patch Repair (Vsr) Endonuclease. Endonucleases in DNA repair that recognize damaged DNA and cleave the phosphodiester backbone. Vsr endonucleases have a common endonuclease topology that has been tailored for recognition of TG mismatches.	1.07216e-27
NZ_CP034550.1\|WP_033433666.1\|2077729_2078704_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187557	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs. This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.13477e-102
NZ_CP034550.1\|WP_033433663.1\|2073836_2075195_+\|glycosyltransferase	gnl\|CDD\|133042	cd06420, GT2_Chondriotin_Pol_N, N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.	9.02457e-20
NZ_CP034550.1\|WP_033433657.1\|2055749_2057534_-\|DUF1998-domain-containing-protein	gnl\|CDD\|378167	pfam09369, DUF1998, Domain of unknown function (DUF1998). This family of proteins are functionally uncharacterized. They are mainly found in helicase proteins so could be RNA binding. This family includes a probable zinc binding motif at its C-terminus.	1.97075e-08

>NZ_CP034550.1|WP_033433662.1|2068061_2068292_-|hypothetical-protein
MEDSGPVDSQQPGETTDRRRTRRHADRVIALLEPLDGVELGEHDRRVIEWLATHDTSVVGTVASLLYRARAVDGAW
>NZ_CP034550.1|WP_084716865.1|2067435_2068068_-|helix-turn-helix-domain-containing-protein
MVSVEAISWALNHAPIPTDRKDASTLAITLIALANHAGPDGRDAFPSVERMMRYTRLSRRTIQRSLRSLEELGLIKPGNTHVRDAKIPEANSRPQVYNLALSTRLSTAPDERRQDDAPLTSRGRQQKRLGASAATSGGVTTTPKPSFNRPDNRPAPSAPPTGRSAVPPVCGQCDARDSDPVSARVLWLDEDRTRSVPCPRCAPQRNGGAR
>NZ_CP034550.1|WP_153277971.1|2067232_2067439_-|hypothetical-protein
MSRVHLFYKEPPSIAHPNGWRSSPHCLEDRTTAERLRDATNLLSGRSATARRTWHIVDCPGDDCGVQR
>NZ_CP034550.1|WP_033433660.1|2066249_2067236_-|hypothetical-protein
MNTSTPFPEPNDDDVERAVAELENYVAAHAPAAADPAPPAAAPATKRVRDLRAEVDEAHLLLELQADAAPLLVDTDRVRRSRKRAAEAARLHALAQDPAARAWQASRVRLVLTAAALTALVGALAWSTTGVHHTLTLGMVERTAAWWGAWAVEPVISTVLLVVVGARAFLATRGRVLHHPHLAVVEYGALTVTLTLNVWPYLPWVSVPWARFDPMQLLAHAIGPLVAVGAVAVLPIIWTAFADLDHGLPVGPTPTPTSPEYRQNTPGTAAAQRGTTGDRVALLVDRARWMIAAGHLSADPSATRLREALGCGTDTAREVRDALRRSAA
>NZ_CP034550.1|WP_153277970.1|2064096_2066253_-|cell-division-protein-FtsK
MSLTMQGDRGGELIPFPNAPVEGNAEDAGAVEATAPALDGELITEAEYQRSRVRRLAESAVSRLPTQWQTPESARQAGVELVNQALLVPMRYSAAVGRGLAVSARAWWAWVRVTDFYEASKAADRLADKWQEIAVVRRRRGVISLVGMSAASLAGLVAELAVGSLPLLVTAGAMSAVLAAAGRSREGAGGRSTRLGSRSLAWLMNGDHLVTAFRDAKLIGRDESLMLVKAPRHDGAGWALTLDLPPSRKASDVIGRREALASALAVDEVRLIVERVRGDDGHAGRLALWVGDADPYATDPIPSPLASAPSWDLWQPVPFGTTARGATVNLPVVWTSLLIGAIPRQGKTFVARLPLTAAALDPHVRLIIADGKGGKDFRPFEQVAHRFIRGSREADARRLISVLEECAADVADRFDRLAEMDDELCPESKVTPEITRDPTHRMPLTVIGIDEVQNFLGLDVPLDDDNPKGKKVGARICELLTYIAKTGPAAGYSLVLATQKPDAQVIPDGLRGQLGTRFALKTMTWQASETILGAGTYKAGMDASKLLTSHKGVGLLLGADGETELSAREAVTVRTHLLHITAIRAACERGRVLREQAGTLTGDASGEHDLAVLDPTAAARLTTEVATATAGTPELTGAEPGREPPEVLTLLANVISEDEHGLVARSELAGRIGWEVKAFGEALRAAGVPSAGKRRMPGHDNPVSVADLDTIRAAIHGS
>NZ_CP034550.1|WP_153277969.1|2063484_2063676_+|hypothetical-protein
MNVRRLEVLFPAHVNTREYAIACAVWSALAPTGPIEDNSLRSDKGMGDVESREVFDEGVPGSS
>NZ_CP034550.1|WP_084716873.1|2062671_2063193_+|DNA-mismatch-endonuclease-Vsr
MSTDVEVGQVVGGHRQHEGVYTYLDPGPAPPATRQATAKVLRRMKRSGTRPELALRSALHRLGLRFVVDRAPPGTDRRRRVDILLRGAQIALFVDGCFWHSCPVHGQLPRANRTWWRLKLRGVVLRDRDTDARLTAAGWLVVRVWEHENPAEAAERIRGLVAMRTTHAQIGGG
>NZ_CP034550.1|WP_033433658.1|2060694_2062356_-|hypothetical-protein
MIQEGDFAELLEHTFDHFPHSSQSRQVTVRMIPDSVHPGASRAEQEIFSQLAALEVAGWEYAMHSTNLPEHDRKRVCEIDFLLLGERGLLVLEVKGGEILLRKGVWHTRDLKGNRHRLKESPLDQAQTSMFALEKVLRRTTADPDLVDRTVFGYGAVFPDSEFDAVSVEWAPEMVINEVRLASEGWADCLDRLGAFWENKLGGRGPLSPDDIERYLNVLRPDFDRVLSLRRLDDLVEKELVALTKSQYKALDQHRRNPRVVFEGGAGTGKTMLAVEMCRRARVSGERVLLTCRSHVLAAFIRSQQDLDGITAVPFDQVSAFDADTFDVVVVDEGQDVVNGHDLDVLDTVLVGGLADGRWAFFLDSNNQRGLVGRYEDDAKARLDSHRPTNVDLMDNCRNTIEIVRATQERTGADLGVTEAGHGREVVVVEEVREKAVAAVLAALTELEEHDVPSEQVVLLSPHQLNASIFVELPAEWLERIDVLDLMRMRRPGRGRVGFARVADFKGLESRYVLLEVDDTADEKAARAQLYVGMTRAKAALWVFKPGGTGVDG
>NZ_CP034550.1|WP_033433692.1|2057530_2060689_-|helicase
MHTTGFPDRDRVLEYLHDQLVGPVDGDDEVLYEKAPQHRYLTAVLYPVSLAPLTADASGPADDAEEVDDQAGALIEDDDDDPITLAGQSRPSSAGISFMIADRSAISVEVRAARYHRFSDEDDEWQREPLDLVGSAALTVEPPSSGIHRKVNLWGEAASAEVTWRPHPGGVIVTVVLVNRKVQEQRRAVAPEDCLFQVGLRCRVAGSAIIRYPTQARAHSDDEAEELELQYRDVPVYAVGHGTAARWDTAGERPEWVGTSFLPVHVVPDVAFDLPDVADAVRLNGLAEIATTPEPVFAALTRFVDRYSDWIGKTWDAAPADLDPRLRPAAERLRDRAIRARDRMLSGLDFLREDPDALEAFALANRVMAMQMAHSRPHLGGSPHAPSEAPDPRVDYDSLNPTWRPFQLGFLLMTVKGVVQEGEDRDLVDLIWFPTGGGKTEAYLGLAAFTVFHRRLTLGEGGAGTAVITRYTLRLLTSQQFQRAATMIAACELVRRDSNGRLGSRPVSIGLWVGGENSPNSFVDARRLLARARDGAAGDKGFQIESCPWCGTRIVPGDQDDEQRWGISATNNSFRVRCLNDKCPFRTELPMSSVDEDLYQNPPTMLVGTVDKFARTVWNENTGVFFGAGRDPGPSLIIQDEFHLISGPLGTIVGLYEAAFDVLMEHLGNKPKIVAATATIRRADEQTRGVFGRSVSLFPPAGLDATDSYFVRTNHSAPGRAYMGVMPQGHTPLTALIHVAAAQLQAPLEVELTPAAEDAYSTLVVYHNSLRELGKTINLAADDIPSRLKVIARAEDHVRQLHDDNVVELTSNVASAQIPKRLDRLKEPHDAPGGVAFLASTNMISVGVDVGRLGIMTVVGQPKTTAEYIQATSRVGRNVDRPGLVVTVYSPSKPRDRSHYESFTPYHASLYRSVEPSSVTPFSVPARLRALHADLVVLVRHALGLSGDQQAASFDPDDERFATLLRRFLSRVERADATELKRVETHLDTLIERWVKRAADAEPLGGLRYSQGGRERPKLLKRFTERGDGWATLDSMRSVDVEVHVQVRGPRK
>NZ_CP034550.1|WP_033433657.1|2055749_2057534_-|DUF1998-domain-containing-protein
MTVRKVRRSQVISPFGPGAIIDLVGESFVVEDAGRWPRQRVPVDFPRLASYLGVNSLASPMPGRPIPYYRFPQWLFCPACRRMSRWSYTREVANTPPKCEHCPAGKQLIPMRFVAVCADGHLSDVDWVRWAHSADRRDRNQNQCQRSDLKFLSKANVGGGLNSLVVRCVPCGGERTLDGLTTSVGLKHIGSKCTGRQPWQDQKDAKVCAKQVVAMQRGASSVYFPNVVSAIDIPPDSDWSSVSEPLAVLRKRDDFKFLVNNPGYKLAKAMIEVIADEHGLSVAEVEAALANEMSASHAQPDGGPENIRPDEWAALINPREEEHHHQDQFISRRADRPLRPASGTVNGWSRLIPEVVLVDRLREVRVLTHFERYAMEEKVPSNLSDDPDFLPAVEVFGEGFFLRFDEEPLVRWEKSAPVVTRCRRLADRRELTGATWLPEPTPRFVLLHTLAHLLLRNTAFEAGYSTSSLRERLYVTKNGGGPPMSGVLIYTAAGDSEGTLGGLVRMGEFPRLGRLLDMSITTALWCSFDPVCADHPGQGPDGLSLAACHACSLTPETSCEATNRLLDRRLLVDPEFGFFKDLAATVGGVPGNLL
>NZ_CP034550.1|WP_153277972.1|2071233_2071464_-|hypothetical-protein
MLEEGRNRPAMVWTVEGCNGVGKPLAQRLVADGEPVVDVPAKLAARARVFGTRQARKTDTTDARSIALVALRTGAA
>NZ_CP034550.1|WP_051766537.1|2072708_2073815_+|radical-SAM-protein
MQVGGIPVTIKPDRTLRAKVTDSCGLTCTFCHNEGTPVTVDNRGRSSRTFLASGRSGRSSIYLGRNGVDFLAATMRADEDLRQALESMAAGLDLDELHLTGGEPTLHPTIADIVALGAAAGYRVCMTSNGENGERVMRACAKAGLDRVNLSIFGTTPEELAEVQEERFRDVRLAAKKIEALERTIDAALTHGVRVSANIVVPDRTHIPRVHRLFEAYSDQLSIRLLNSLGDGMESIRSINQVLDELGARPVAHHATAGASGYRTEYVLPNGRTAYFKKIRPTRLSKTCATCRFRDPATCEEGYYGLRLYRSTDGRYLTGVCIQRMDLCLPVEEFVSSALADEVRELRERELADPEAILNHLSVEFEQV
>NZ_CP034550.1|WP_033433663.1|2073836_2075195_+|glycosyltransferase
MSRNEIAVVVLEYNRHKRLQLILERLTEQDIGQDRFRVVVVDNGSAEPLRPVVDDYASKLSIEYLRIEKPVSRGKARNCGIEAVREPAVLILDGDTLPDRDLVRRHLEVLADPDVAVSLGSRRERRVRSLTTPVPLDHDSPTTFAALHEQAERDLRVPDIDQPVIQANFRRIGYFFFYSHNIAVRTDIAKAAGGFNEELVGWGLEDLEFGFRIREVLSGGQTMKWSPQAGSVHVPHLRDFVRNFGDLKSNQEKLHQSYKSFHWEGHKFATPLLECLRIMMIEELTEALPHDAVLPELPEIERWVGDVESGDSWLLGIGRVAGWRGIAPQLRSSLVDWRDPAVPSFCGTQFLHQDNTFRNVINLDVWRALPWHHVSEALGEARRVSQFPIFVATAAHDANVAGLESSPGLDRSVPRFVEDAEWLAAAVRDFGLACETTRTAEAVAVRVLPVGY
>NZ_CP034550.1|WP_033433664.1|2075201_2076419_+|MFS-transporter
MAEVLTPAGKRSWPFYVAGFVDSVGSGLFLPVSMLYFIRVVGLPEWQVGTFIALSSVIALVVPALVGSLIDRVGPLRIIVIGQVLQAVGTAGYLLVGSPFGVLVVTMLCAVGQRVFWSCFFGLGAQLAGDGPKEKWFSVASTMQAGGAGIGGLLAALLFVSDTAASYVLLIVLNAASFAVSAALLLVIRVGKTGTSLDTGDGVSGNGGYRLVLRDRRYLLIVVLGTVLAIPSTFFASGLPVYLTQELDAPSWISGGLLTTVTVLMVALQMLAVRVVRGVRHTTTLAICAFLWTAWAIAMAVASTVDDSVLVAFLFAVTGFYIVADLLHGPIVNALVEEIAPGGMKGRYLAFFQYSYNFAAVLSPLLVAAFAWGPALPWGIFAALSGASGLLFLMLNVGGRRARKP
>NZ_CP034550.1|WP_153277973.1|2076465_2077737_+|glycosyltransferase
MANLYHGIGTQTRYLISCLGGHRAELVDAVGEFDVHLLVPDASYSRPGYAVDEAMLAANRLRVEAADITLWELAHDDSRLFHIDKWHQVSAEAARVVSVLAERYDEVLVVAVDAIYCVVGDHLDRLLTPGQWERTSLVYTLYSSSRIPGTTQEPGRDEGELAAVMRANTDPRVFFADVGTYFSAHLVEDFGLDPTRLRPFIQALSLDDPELQRRDRAEALEEVRSWNIPLDRPIVLSMGRADPIKGLDRAIRAVTPLRERLHFVLIAAPYTPEDAEIRKYRTLLAESGLRHTLVPRFDRTLPRSLCSLHETAAVLSASLGEPCGQVPQEAALWAQGGGPVVIVPDEGGLAAQIIPGTTGFVFPQGDIGAMTRMVETVLDQTPEERDRMRAAATRKVLQERDFTRSLGTFLKSVWGVRQAVSHG
>NZ_CP034550.1|WP_033433666.1|2077729_2078704_+|NAD-dependent-epimerase/dehydratase-family-protein
MAESTVLVVGGAGFIGTNLVRYWLDEHPRDRVISLTSPRHRKHAHDSAVNVECELDNPVRIREVLSEHDVDTVINCGGWSDNARAVRDPLGCFRANVADCVNVLEACRTSGVRRYHQVSSAEVYGDIDDRATADVDESAAQRPFTPYSSTKAAADHLALAYGRTYRFDVTITLSSNNYGPAQLPEKLIPRFVIRALLGQQLPIFDSPGSSREWLHVKDHCRAIDHILAHGTPGQRYNVGSGESADAHQIADLILDYLGLPTALKTLVPSRPVLLRRTGVDSGKLRTEVGWRPEKHFATALKETIEWYVDNRTWWLPHVDLVGAR
>NZ_CP034550.1|WP_033433667.1|2078740_2079916_+|MFS-transporter
MADTSQRERIAAFDPAYWSLAAVFLFNGFQFSTWISRVPALTDQIGADVGGIGLALTISGAGMLVATPFAPGLCGWLGLRRAVVVPALIAVLLLPVAGLTRSVVQLSCVLFLMSACIAVMNVASNLSGLALARRLGRQVMPFFYGVAGLAGLGGAAVASVLSGAGWSPLAHFSAAAALMAPVLLIASRFLPVEESAEQDRTPHVRGLPVRRFAGYAIAAFVITLAESTTLDWFGLLLTRERGVTEAATAAGLAVFSLSIAGLRLVGSWVEAAVPVRGLLVVGAALAASGMTLLAVGLVPGSVYVVYVLVGAGLAYLYPAVVGQVGRNDPQAARTNMAVVAWANSLGYAVGPIVVGAVAMGWSIPIAIMMVAALLMGGVLLAVSTAVGRSVK
>NZ_CP034550.1|WP_084716867.1|2079819_2080413_+|DUF402-domain-containing-protein
MVHSDRDHDGRRTADGRRAARRVDGGGEIGEVIHGPRTSLLDTATGRYRTPRGRVAAIDRFEPRGSVLYFAAPEVDNPRLRSLECWVLPHRSLRVLRWELLDPATATEADFDYYIDFCRIDTFPGRVEMTDDYLDVKVWHGKRLSVADVDELLAAVAAGFIGSDEAQRVIESAFEVAVAVTAAGFLVPEWLAQEGGK
>NZ_CP034550.1|WP_051766538.1|2080421_2080853_+|cytidine-deaminase
MEILEKLRSIAVDTARNAYVPYSEFPVGAAAATSTGEIYRGCNIENASFGMTLCAEASLIGSLVSNGGEGIEVISCRTVAGVALAPCGRCRQMIMEIAGPACLVDLGEELVRLDTLLPVAFTGRDMDIETTLKNGKWNPSNGN
>NZ_CP034550.1|WP_033433668.1|2080842_2081376_+|CYTH-domain-containing-protein
MAIEFEAKVLDVDPVASEQLILARGGVKVGDRLLRRFVYDIQPGDQSRWVRLRDTGDEITLTVKEIRSDAIGGTIETEVVVDDFDKTNELLGKLGYAPKSYQENRRSSFTLDEARLEIDHWPLIAPYLEIEADSAEEVKRVATALGYDESELTTENTVAVYARYGIDLATLAEVRFE

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Crispr_ID: NZ_CP034550_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_4

2452816-2452977

Orphan

Consensus_repeat	Method
GCGTGCTCGTGGTGCCGT	CRT

4 spacers

The CRISPR arrays of NZ_CP034550_4

>merge|NZ_CP034550|4|2452816-2452977|CRT
GCGTGCTCGTGGTGCCGTGCCGCCGGCGGGGTTGTCGCGTGCTCGTGGTGCCGTGCGGTGGGTAGGGCTGCCGCGTGCTCGTGGTGCCGTGCCGCCGGCGGGGTTGTCGCGTGCTCGTGGTGCCGTGCGGTGGGTAGGGCTGCCGCGTGCTCGTGGTGCCGT

>NZ_CP034550|4|1|2452816-2452977|CRT
GCGTGCTCGTGGTGCCGT	GCCGCCGGCGGGGTTGTC
GCGTGCTCGTGGTGCCGT	GCGGTGGGTAGGGCTGCC
GCGTGCTCGTGGTGCCGT	GCCGCCGGCGGGGTTGTC
GCGTGCTCGTGGTGCCGT	GCGGTGGGTAGGGCTGCC
GCGTGCTCGTGGTGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033427123.1\|2470068_2470830_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235705
NZ_CP034550.1\|WP_033427109.1\|2440448_2441309_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371463
NZ_CP034550.1\|WP_033427118.1\|2459762_2460800_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187551
NZ_CP034550.1\|WP_033427119.1\|2461291_2463643_-\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP034550.1\|WP_033427115.1\|2450448_2451234_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
NZ_CP034550.1\|WP_033427113.1\|2446149_2448195_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340856
NZ_CP034550.1\|WP_084715812.1\|2455315_2456815_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380566
NZ_CP034550.1\|WP_033427317.1\|2457130_2457571_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176854
NZ_CP034550.1\|WP_051764184.1\|2466081_2466972_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP034550.1\|WP_033427112.1\|2445364_2446147_+\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|119439
NZ_CP034550.1\|WP_033427121.1\|2468455_2469394_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427110.1\|2441323_2442583_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427116.1\|2451828_2452377_+\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP034550.1\|WP_051764180.1\|2448426_2449971_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP034550.1\|WP_033427111.1\|2442696_2444019_+\|YncE-family-protein	unknown	unknown	gnl\|CDD\|274824
NZ_CP034550.1\|WP_084715808.1\|2443980_2445279_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340928
NZ_CP034550.1\|WP_033427122.1\|2469404_2470022_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239477
NZ_CP034550.1\|WP_051764182.1\|2458170_2459766_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP034550.1\|WP_051764183.1\|2463819_2465931_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|366375
NZ_CP034550.1\|WP_033427315.1\|2449988_2450462_+\|SLATT-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033427123.1\|2470068_2470830_+\|enoyl-CoA-hydratase	gnl\|CDD\|235705	PRK06127, PRK06127, enoyl-CoA hydratase; Provisional.	1.59299e-81
NZ_CP034550.1\|WP_033427109.1\|2440448_2441309_+\|hypothetical-protein	gnl\|CDD\|371463	pfam11316, Rhamno_transf, Putative rhamnosyl transferase. Most members of this family are uncharacterized, but one is a putative side-chain-rhamnosyl transferase.	4.00746e-44
NZ_CP034550.1\|WP_033427118.1\|2459762_2460800_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187551	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs. Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.04661e-56
NZ_CP034550.1\|WP_033427119.1\|2461291_2463643_-\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP034550.1\|WP_033427115.1\|2450448_2451234_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	7.66241e-43
NZ_CP034550.1\|WP_033427113.1\|2446149_2448195_+\|glycosyltransferase	gnl\|CDD\|340856	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	2.09532e-55
NZ_CP034550.1\|WP_084715812.1\|2455315_2456815_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380566	cd06343, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however its ligand specificity has not been determined experimentally.	3.11433e-61
NZ_CP034550.1\|WP_051764184.1\|2466081_2466972_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.51176e-30
NZ_CP034550.1\|WP_033427112.1\|2445364_2446147_+\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|119439	cd06533, Glyco_transf_WecG_TagA, The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.	9.89826e-64
NZ_CP034550.1\|WP_033427122.1\|2469404_2470022_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239477	cd03382, PAP2_dolichyldiphosphatase, PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.	1.35561e-05
NZ_CP034550.1\|WP_033427317.1\|2457130_2457571_+\|SRPBCC-family-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	7.41348e-08
NZ_CP034550.1\|WP_033427116.1\|2451828_2452377_+\|LuxR-family-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	3.21872e-15
NZ_CP034550.1\|WP_051764180.1\|2448426_2449971_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.17587e-84
NZ_CP034550.1\|WP_033427111.1\|2442696_2444019_+\|YncE-family-protein	gnl\|CDD\|274824	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.	1.81525e-43
NZ_CP034550.1\|WP_084715808.1\|2443980_2445279_-\|MFS-transporter	gnl\|CDD\|340928	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily. This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.07564e-66
NZ_CP034550.1\|WP_051764182.1\|2458170_2459766_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.5087e-82
NZ_CP034550.1\|WP_051764183.1\|2463819_2465931_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|366375	pfam00931, NB-ARC, NB-ARC domain.	3.08452e-12

>NZ_CP034550.1|WP_033427116.1|2451828_2452377_+|LuxR-family-transcriptional-regulator
MGISPVAFAVELTFRDARQVRRSIHLAHREYWRPLAEQGVLVGTGPWADGSGVLLIVQVPDDAAARDLVRGDPYVRSQSIAEVRIRQWHVLLGLPEGERVPSMVRPRDGQSADARSREPLTPHEHRIALMMLEGMTNRQIAEHFSVSTRAVELHITRIYRKLDIGRRAQLAAAMPWGQRSYL
>NZ_CP034550.1|WP_033427115.1|2450448_2451234_-|enoyl-CoA-hydratase/isomerase-family-protein
MAAQQVRLERDAVGLAVLTVDAPPLNLYTAELHDLLEAALDDLEERPARALLVRAEGKVVSGGVDVRLFAAQKTVARAKALFDRMLELPDRVAALPFPTVFAAHGLCLTWAFEVAVACDVLLASSRAEFGLVEKVVGLTPTMGGTQRLAARAGVGRAKEFVMTGDRYDAEVLERWGVVNRVLPHDGFDDAALEFTHALAKGPTLAHAATKRVLAHFESGGVAEANEHVTAIAAELFDSEDLRGAVRSFLADGPGKATFSGR
>NZ_CP034550.1|WP_033427315.1|2449988_2450462_+|SLATT-domain-containing-protein
MDDRAPAPKAGLTPHELALDLLARIDRARDYGRSRKTTFRRRSTALKVGLLALSATATIILGWQDLDFWTGLAFSLVALTTVFAALEPFFAWRSLWVLMEESQYRFHRLYDELAHYLAATPTGEVDAARVEAMFREYQETWAAVSTRWLEFRRISDR
>NZ_CP034550.1|WP_051764180.1|2448426_2449971_+|serine/threonine-protein-kinase
MGVVQPLPPNAPSRIGDYTLLAALGRGAMGSVYLARSRGGRPIAIKVARPELADDPQFRERFRREVEMARSVGGFWTATVVDADPDAERPWMATEYIAGLSLHQAVQDHGPLPERAVRRLAAGLAEALVAIHAAGLVHRDLKPSNVLLADDGPRVIDFGIARALEHSALTEAGIVFGTPGYLSPEQVVGQAITSQSDVFALGSILVFAATGSGPFGEGATSALVYRVVHQDPDLTRVPPSLVPLIVPCLVREPANRPTPARLLELIGPPSAEPSWLPASVRTVVEQRHTELGNLPNKPPTRVMVDEPPAKPPTVVNPHPTGIAPVPPKSPTRVAPVAEPDPKDVKRTGARFRTSRAVGLGWAGANLAAATVTGWLANEQNGAVAPVRLAAFIAFVVFMVAAIRLLIGVMATPLTLDVGPEGITLSDGQQTRRLPWYAVARVKVEAHHARPWLVVWLVSGARPPETLGRGTFTTHKGGLRVYPVSHERYRKRRERDMAELRSALSWYGSGAYDPM
>NZ_CP034550.1|WP_033427113.1|2446149_2448195_+|glycosyltransferase
MPLAVVVVTYHSADIVEDCLRSVAAALESIPDGRVVVVDNASADNTLEVVARVAPDARVVARASNDGFAAGVNAGFAAAPDCDVLVLNPDVRLAPDAIALLRAALAMPGTGIAVPRLVGADGAPQPSLRRAPNPLRALGEAVLGGTRAGRREALGELVVDPLRYDTAGTVDWATGAAWLISREAREATGVLEERYFLYSEETEYMLRAGDRGYAVRYEPRARAVHFGGEQSTSPVLWSMATTNRVRMVRERHGRPRAFAMWLVVLLNELLRAPRHAKHRTAARDLLAWRRWPARPGAGAEPGWICFSAQDWWYHNRAHSDFQLMRSMARHRRVLVVNSIGMRMPTRGNSTHVSRRILRKLRSVAKFVRRPLPEFYVMSPLPLPFYGSPLLRRVNAVLVRAQVRLVATALRMRTPVVMVTIPTAWDVVAPMRRHRLVFNRSDRHSDFPEADRAAIEALEHELLTHADHVVYVSNALMEEERPRTGARAHFLDHGVDVDHFTARPAHEWPDDIRSVPGPRVGFFGALDDFVVDFDLLERLAAELPEVSLVLIGDATHPMERFDKHPNVHWLGFRPYSLIPAYGSAFDVAIMPWQDNSWIKHSNPIKLKEYLALGLPVVSTDFAELAAYTDRVRAATTHAAFVDAVRLTLAQGAPLPPAALRASVQPHSWHSKATTLLRLTTTP
>NZ_CP034550.1|WP_033427112.1|2445364_2446147_+|WecB/TagA/CpsF-family-glycosyltransferase
MPDISQARVRVGAVDVWAVAETGVAEHVAGAWRRAEGGAIVTANVDIVRAATRDPALAALIAGSEVVVADGMPVVWAGRLAGVPVPERVTGSSLVFTLAGAAAREGRSVYLLGGNPGVPERAAAVLAERFPGLRVAGTDSPPFGFDTYPELTAEAVAKVVEAKPDLVMVGLGFPKQERLIRLLRAELPRTWFLGCGAGIPMAAGEFRRASGVVQKVGAEWLHRLALEPRRLAKRYLRDDLPFAFRLLGGALRTRFRRPGE
>NZ_CP034550.1|WP_084715808.1|2443980_2445279_-|MFS-transporter
MYVASARPRDRVRGKVPGTVVALGAVSLLTDVSAEMVTAFMPVYLLFSLNMSYAQFGFLDGLYTGATAVLRLVGGHLSDRTRRHKAVAAAGYGLSAVTKLIFPVVGASAFGIGATLAADRAGKGLRTAPRDALISLATPPERLGAAFGVHRTMDTVGALLGPLVTFLLLYWIGVVAGPVFVVSGCFAVVGLIVLAAFVREHPAPAPSGPKPSVRAGLALLRGTGYRRVAVASAVLGLATLSDAFVFVLVQEATGAPLSLLALFPLGTALVFLLAAAPAGRLADRVGRWPVFLGGHVLLLGVYALLLLAPGTGYWGAGAALLLHGLFYAATDGVLSARVSALVPETLRASGLAVVQTGQALARFASSVAFGFLLQYAAFGTAVHAAIGSLLVAVLAAWWLTARGSAPHGDASPGSGSPGGGSQQAQDDAAVGG
>NZ_CP034550.1|WP_033427111.1|2442696_2444019_+|YncE-family-protein
MVHRFIRKATATGGAAAVGAALLLVPTATANAEPTRVLGYVANNGGGVSVLDTATDAVTSTIGDSTAGSPYGVGVAFDGARGYVTNVRDNTLTVIDTPTNTVDAAVPVGDGPAGVVVAPDGGHVYVSNYRAGTVSVVDAATLTATETIPVGPNADGVAISPDGSRLYVAHDVVGPGTVSVVDTATNTEVAEVATGSTPTAVAVTPDGAKLLVVNKLSNNVAVVSTATNAVIGTIPVSFIPHGIAISPDGARAYVTNSENHTLSVVDVTALTHVAQVPVGSRPVGVALTPDGARAYVTNFNSGTVSVVDTATLAVVDTVPVGENPVGIAIHAVPPAPTKLTAGYAQLQTRLLYFQLRGLDATLVESHTGRPVVGEQVSFRTVKGHPLCTATTGATGKATCDANVPLVVGLATLLRGYTAGFAGDTAHGTSAAHGGVVLSLL
>NZ_CP034550.1|WP_033427110.1|2441323_2442583_+|hypothetical-protein
MIGPRALLAVLLLTTACTAEAEVRPRPPAEPVVLPGPSVDYYEKWANGPNPAGDPTVFPVNVWMQDPSGVENGEKLGRAYPRIGVDSGIGLWEDQWWYLRQEGLYETDWRVYVDPVRLDTVLKDTEHARNYVGYLVADEPDMNKVYGDVFNPDMQPSAILKAANEVRAKDPTRPTYLNFSPWMGTPTGQIGYGHVEKSYEEDMRTYCSAADLVSADYYAWTHPDRNHTVGAYAYGEVIDTMRKWCGPDKPIYGFVETGHPHTHGEIIDADQLESAVWNTVLHGATGINYFAHSFYTDGKGEYSSVLTRPEITARVTAVNARLKALAPVLNSPSLSGVAARSDNGIPVAVLHKQLDGQRWVLAQTDGNKENPKSLPAKVELSVPVRSGRATVVDEDRTVPIVNGKIVDDFKPYQVHVYRF
>NZ_CP034550.1|WP_033427109.1|2440448_2441309_+|hypothetical-protein
MDHVILTRFNLPSVGAESVVRAREGWLVERVGLFERYCLPSVAAQTSANFRWLIYFDPESPGWLKDRIASHGDAYTPVFRTRVSREELLEDITKLFPTRGDGLITTNLDNDDGLATDFVARLQAARPTGRRTALYLANGLVKSPGGLYAHHDPDNAFASMREGWDDPVTCWTDWHNRLHRHAEVLSLGGAPGWLQVVHGRNVSNRTRGRLVSPVPHRARFGAALDDVPEPAGRVIARDRFVGHPLRVARDGARYLAKTTAMRLLGPGGFEKAKQVLAARGRPGTPN
>NZ_CP034550.1|WP_084715812.1|2455315_2456815_+|ABC-transporter-substrate-binding-protein
MRPARRRGRPARWVSCGLLGKGLPCIRTRIVHGQHPSRSCPNARLFGVTVQSDDSALCWYCTFEHTDRAVCHTNGRYCQHVSILLPTGNVRCRGVAVRKLVVGSTVLVVLAAGCAEGEQPVKTGPGVTDSTISLGVLTDLTGPFSATSQSRIKGYELFFGDLNDRGGVCGRKVELEQRDHGYDVDRALDGYFELEPRVLGFLDITGAPMTEAIEPDLVQTRALAAPASWSATLLGNPHMVVVGTTYDLDVINGLDHLRRTGAIHDGDTIGHIHLDSDFGRNALEGSVFAAQQWGMTLVPKAVQAGADVSAQVAELRTAGAKAVVLSTSPQQTATAVVAAAGWDAPFLVNAASYDPLVLRSEVAQAVVDRVLVVSPIAPFATDAEGPREVAEAFRRKFPDVEPTGSVDHGYAVGIAFAAIMEKACAERDLTRDGMLRAFQDTSDVDTGGLTGHLRFSLVGRPSSTRSYVSRPDPGTAGGLAVVEGLFESELVKLKGTRAR
>NZ_CP034550.1|WP_033427317.1|2457130_2457571_+|SRPBCC-family-protein
MIEVRTTVPTSVDRVFAVLADGWSYAGWVVGAAHIREVDPGWPAAGTRIHHSVGAWPVAVKDVTTVRVAEPPKVLELEARLWPIGAARIRFELAEVSGGTEVAMFEEAVKGPPALLPEGLQALFLTPRNRESLRRLADLAVRKESQ
>NZ_CP034550.1|WP_051764182.1|2458170_2459766_-|NAD(P)/FAD-dependent-oxidoreductase
MSDVVDAVVVGSGPNGLVAANVLADAGWDVLVLEAADEPGGAVRTAELTAPGFHHDLFSAFYPLGAASPVMAGLGLDRHGLKWRRAPEVLAYVLPDDRVALLSRDVDRTAESVESFGAGDGDAWRGEFERWQRIRGELVDALMRPFPPVRAGTGLLGALGPGEALRFARSFVQSVRAFGDDRFTGEGAPLLLAGNAMHTDLGPDQAGGAAFGWLLSMLGQDFGYPVPEGGAGALTRALVRRLGGRVQCSRPVDRVVVAGGRALGVRDASGGFVRARRAVLADVPAPRLYLGLVGEDHLPARLVADLARFEWDDATVKVDWALSGPIPWTNPDARGAGTVHLGGDFNGLAMTSAEIACGRLPRVPFVIMGQMTTSDPTRSPAGTETAWAYTHVPRGEQWSPDRVRRRADRLEQLIEQHAPGFRELVRGRFVQGPGDLEARNPSLVGGSINSGTAAIHQQLVFRPVPGLGRADTPVDRLYLAGASAHPGGGVHGAAGANAARAAMARNGLAGDAYRLLIRGLHQAVYRGEGGW
>NZ_CP034550.1|WP_033427118.1|2459762_2460800_-|NAD-dependent-epimerase/dehydratase-family-protein
MRVVVTGASGNVGTALRRALAPTGVEVTGIARRVPPRADTRWVSCDLGAPAAEAVLTREFTGADAVVHLAWAIQPTTGEPDMRRTNVTGSAHVLRAAARAGVPHVVVASSVAAYTPTSTSAPVDEGWPCNGVPGSAYSAQKVELERMLDDHPNVARIRPCAVVQPDAGGELGRWLLSPLLPPALLGRRWLPVPLWPDLRFQLVHADDVAEAVRLILRRRATGAFNVAADPVLRASDLAAAVGGFLVPVPFRALPGPAWLAWRAGLQPLHPGWLRLAARASLVDTTRLRALGWTPRHDPRQALGAVVAAIAEGRGTWGPLAPRRGPAWRGLGWGRPVHQSQEGGSR
>NZ_CP034550.1|WP_033427119.1|2461291_2463643_-|RNA-binding-transcriptional-accessory-protein
MTTAIHQRIADELGVRPGQVSAAVELLDGGSTVPFIARYRKEATGALDDAQLRTLEERLGYLRELEERRAAVLESIRSQGKLDDALQAQILAADSKARLEDLYLPYKPKRRTKAQIAREQGLEPLADGLLADPTLDPQAVAAEYVTGEVADVAAALQGARAILVERFGEDGDLIGELRERMWGQGRVAAKVREGKEEEGAKFADYFDFSEPFTKLPSHRILALLRGEKEEVLDLVFDPADEDEPTGYEARIAARFGIDDRGRPADKWLGDTVRWAWRTRILVHLGIDLRSRLRAFAEDEAVRVFASNLRDLLLAAPAGTRATMGLDPGFRTGVKVAVVDATGKVVATDTIYPHVPANRWDESIARLAALARKHSVELVAIGNGTASRETDKLAADLLKRHPELKLTKAVVSEAGASVYSASAFASAELPGLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSESKLSRSLDAVVEDCVNAVGVDLNTASVPLLTRVSGITAGLAENIVLHRDSNGPFRTRKSLKDVPRLGPKAFEQCAGFLRIPNGDDPLDASAVHPEAYPVVRRIQERAGTPELIGNTAVLKVLRPQDFVDEQFGLPTVTDILKELEKPGRDPRPAFKTATFADGVEKIADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHISALSTTYVKDPRDVVKSGDVVRVKVLEVDIARKRIGLSLRLDDEPGRKGGQQRDGQRDGQRGDQRGGQARGQGRGQGRDGQGRGGRPRQQERPPANGAMAEALRRAGLGG
>NZ_CP034550.1|WP_051764183.1|2463819_2465931_+|tetratricopeptide-repeat-protein
MSDDGSSRNEFSGTAANVVQAHSIEGGVHFHAAVAALPVPRQLPADVPGFTDRVTHLRRLHDWLDTPDEQAPPAEVVAGPPGIGKTSLVTHWAHQVRDRFPDGDLFVDLRGYHVERTVSADEALSDVLRALDVPDERIPARLEARAALYRSLLHRRKMLVLLDNASSADQVRPLLPGTSTCRVLVTSRSHLGGLIARNGAHRMSLDVLPTEHAVELLAGIVGDGRVAAEPGAVARLVEYCGRLPLALRIAGERLAEDPRARIGELVEELAEVRERLDVLATPGDESTAVRAVFSWSYQALSPDAARAYRLLGLLTGPDVGLPAAAALLGTGQGRARRVLAELTGVHLLAEQERRYRFHDLLRLHAAECAEADEPPAERHAAVRRALLWYAHAVQAAVDAVIPFFSRIPVELAAAEAPVPAFEDRAAALAWCDAERANLVAAVDRAAELGEHELAWQLPVLMFGLLLVRRPHADWVDTHQVGVASARVRGEVAAEAWLLTSAAIAERELRHPERALEHLERALACWQEDGTRWGIAWALRDTGAIYEQMGRYDEAVAAFERALAMHLEDGDTWGEATALAGLARCHLGAGEPERALAEANRALEIRREHRDQRNVGNALNDVSRVYLGMGEYEPAAEHAEQAGVVLAEVDYWNGRALSHELLGDALAGLGRAEDAAAQWRVALELYGSLGDPRADEVRARLADG
>NZ_CP034550.1|WP_051764184.1|2466081_2466972_+|alpha/beta-hydrolase
MTTLDHWGGTGRYVDLDGPVHYVDFGGDGPPVVLVHGLGGSHLNWCLLAPHLVGHHRVLAVDLAGFGLTHPEGRGTTVPANARLLDRFLAEVVGEPVALVGNSMGGMISILHAARRPDSVTALALLDPAVPMPLGTRLDPQVALAFGAYAVPGLGRWVLERARRGVSPRRQVKRVLNLVCADSRSVPEEIILASMSLLEQRAEVPGLDEAFLAAARSVVWTGATSRRYYTAMSRVRVPVYLVHGDRDRLVPVTSARAAAKRNPSWRYEEFEGIGHVPQLEIPDVIGERLVAWLAGR
>NZ_CP034550.1|WP_033427121.1|2468455_2469394_+|hypothetical-protein
MTPARKLAAALVAALALPTLTTPAAHAVSDADLAHYWAPVHYQDTDSSDYDADYLSSVDFDGDWNAQNNWEAQDDSLARLTGAAYFSVVETSTHWFIVYAFYHPRDWDDAPDPFELTTHENDMEGLLATVRKDGSTYGRLEAVVTVAHSDFYSYVAPGSTYTSGRESVDGTLRLQGTRPTTRQEAKGHGLYAWNGAEFPGGDGVVYVPSATGEVPSGGNDRSVGYRLIDTFATGGLWAQRNNTATFASWGTFRGDNGKDNAANTAWGWDDGNDGGDLQRGLLATDPAYLVSVYFGNRGAFSLTYTRNAYRGN
>NZ_CP034550.1|WP_033427122.1|2469404_2470022_+|phosphatase-PAP2-family-protein
MSTRASAPPLARLVTEVLAPWVLVLSLPLVVAWHATGNVPDALLWGAVVGLTGSVIPMVVIVHGARRGRWNGHHVTNREGRLVPLLACLASLGLGIAALTLGGAPRAMVALALAMFLSLVVCLAVTFGVPVNGERGWKVSFHAAVAAGAVTVLFISFGPWALLGVPLVALVAWSRVALGDHTTPQVVVGALLGAVLAGSSFWLLA
>NZ_CP034550.1|WP_033427123.1|2470068_2470830_+|enoyl-CoA-hydratase
MTLRLDTAGPVATLTIDRPAKRNAMSYEMWSALPGLLARVERDDAVRVLVVRGGEHFSAGADISEFSTLRSGAEGAARYSEAVHAGERAIATLDKPTIAAITGFCIGGGCEIALACDLRVAAADARFGITPAKLGIVYHLTSTKQLVDVVGPAWAKQILFSGEILDAATALRIGLVNEVHPAEELEARVKGLAETIASRARVSVRGAKRIVNRITDGRHDEDEAVRALYDEAVRSPEYAEGVAAFLEKRPPRF

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Crispr_ID: NZ_CP034550_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_5

2852974-2853060

Orphan

Consensus_repeat	Method
CCCGCCTCGCCGGCGACCTCCGGCCGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_5

>merge|NZ_CP034550|5|2852974-2853060|CRISPRCasFinder
CCCGCCTCGCCGGCGACCTCCGGCCGGTCGCGGCTGACGATGCGGCGAGCGCGCCCACCCGCCTCGCCGGCGACCTCCCGCCGGTCG

>NZ_CP034550|5|4|2852974-2853060|CRISPRCasFinder
CCCGCCTCGCCGGCGACCTCCGGCCGGTCG	CGGCTGACGATGCGGCGAGCGCGCCCA
CCCGCCTCGCCGGCGACCTCCCGCCGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_153278048.1\|2863855_2865529_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273441
NZ_CP034550.1\|WP_153278047.1\|2860147_2861332_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|223733
NZ_CP034550.1\|WP_033430809.1\|2861294_2861945_-\|crotonobetainyl-CoA--carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|224647
NZ_CP034550.1\|WP_153278046.1\|2839921_2841337_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP034550.1\|WP_033430888.1\|2844362_2844761_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226318
NZ_CP034550.1\|WP_033430798.1\|2837552_2838110_+\|carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|130981
NZ_CP034550.1\|WP_033430807.1\|2858554_2859277_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430806.1\|2858018_2858471_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716348.1\|2847386_2848379_+\|DUF1702-family-protein	unknown	unknown	gnl\|CDD\|369650
NZ_CP034550.1\|WP_033430804.1\|2856868_2857291_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|238329
NZ_CP034550.1\|WP_033430803.1\|2848420_2850304_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP034550.1\|WP_084716347.1\|2844898_2847076_-\|CRTAC1-family-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP034550.1\|WP_051765619.1\|2862198_2863098_+\|putative-selenate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|275346
NZ_CP034550.1\|WP_153278895.1\|2863124_2863859_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213223
NZ_CP034550.1\|WP_051765611.1\|2843109_2844366_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|227277
NZ_CP034550.1\|WP_033430808.1\|2859287_2860016_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051765610.1\|2841453_2842887_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP034550.1\|WP_033430805.1\|2857292_2857823_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430799.1\|2838153_2839188_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|224001
NZ_CP034550.1\|WP_033430800.1\|2839323_2839686_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319911

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_153278048.1\|2863855_2865529_+\|ABC-transporter-permease-subunit	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	3.25372e-46
NZ_CP034550.1\|WP_153278047.1\|2860147_2861332_+\|phosphotransferase	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	2.82001e-64
NZ_CP034550.1\|WP_033430809.1\|2861294_2861945_-\|crotonobetainyl-CoA--carnitine-CoA-transferase	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	7.68886e-24
NZ_CP034550.1\|WP_153278046.1\|2839921_2841337_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	7.7828e-66
NZ_CP034550.1\|WP_033430888.1\|2844362_2844761_-\|hypothetical-protein	gnl\|CDD\|226318	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown].	6.97031e-29
NZ_CP034550.1\|WP_033430798.1\|2837552_2838110_+\|carboxymuconolactone-decarboxylase	gnl\|CDD\|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	1.86342e-13
NZ_CP034550.1\|WP_084716348.1\|2847386_2848379_+\|DUF1702-family-protein	gnl\|CDD\|369650	pfam08012, DUF1702, Protein of unknown function (DUF1702). This family of proteins contains many bacterial proteins that are encoded by the UnbL gene. The function of these proteins is unknown.	5.7456e-69
NZ_CP034550.1\|WP_033430804.1\|2856868_2857291_+\|acyl-CoA-thioesterase	gnl\|CDD\|238329	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).	6.91029e-17
NZ_CP034550.1\|WP_033430803.1\|2848420_2850304_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	5.41619e-07
NZ_CP034550.1\|WP_084716347.1\|2844898_2847076_-\|CRTAC1-family-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	8.40776e-09
NZ_CP034550.1\|WP_051765619.1\|2862198_2863098_+\|putative-selenate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|275346	TIGR04553, ABC_peri_selen, putative selenate ABC transporter periplasmic binding protein. Members of this family ABC transporter periplasmic binding proteins and represent one clade within a larger family that includes phosphate, phosphite, and phosphonate transporters. All members of the seed alignment occur near a gene for SelD, the selenium-activating protein needed to make selenocysteine or selenouridine. Context therefore suggests members should be able to transport selenate, although transporting other substrates as well (e.g. phosphonates) is possible. This model has no overlap with TIGR03431, whose members are found regularly with phosphonate catabolism operons.	3.98374e-119
NZ_CP034550.1\|WP_153278895.1\|2863124_2863859_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213223	cd03256, ABC_PhnC_transporter, ATP-binding cassette domain of the binding protein-dependent phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only prokaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	9.70312e-90
NZ_CP034550.1\|WP_051765611.1\|2843109_2844366_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|227277	COG4941, COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription].	3.01703e-138
NZ_CP034550.1\|WP_051765610.1\|2841453_2842887_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	6.63783e-78
NZ_CP034550.1\|WP_033430799.1\|2838153_2839188_+\|alpha/beta-hydrolase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	0.0020053
NZ_CP034550.1\|WP_033430800.1\|2839323_2839686_+\|VOC-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	1.96028e-28

>NZ_CP034550.1|WP_033430803.1|2848420_2850304_+|VCBS-repeat-containing-protein
MTQAVRAAVAAVAVLCVCAALGVATRRPGLGAAGTARLAEGFRFTAEQLNTAPAGAHRERVVAPALRGIRSWISAVGAAVAATDLRGAGRPGDVCLVDPRDDSVTVRAVPGDPGDYPPVRLVPIGVPYDPTMAPMGCVPADLDEDGDTDLVVYYWGRTPLLFVNAGGVPGPDTFRARELLHPVQVWNSTALNVGDVDGDGHLDLLVGNYFPDGARVLDPDAGDDVRMAMQDSMSRARNAGANRILLTRPRGVDRAPDLVDASTALSPTAAGSWTLSIGLQDLDGDGLPEVYQANDFGPDQLMVNRSTPGRVVLTEVAGRRDLTTPKSEVLGHDSFKGMGVAFTYDRGARLPTIVVSNITTPYALHESNFAFVPDGDPADLARGELPYRERSERLGLARSGWCWDVKAGDFDNDGVDEILQANGFLKGEVDRWPLLQELAMGNDELLRHPWAWPAFGPGDDLSGHESNPFWVRGPNGAYTDLAPALGIAAPDNSRGLALGDVDGNGTLDVLVANQWEDSALLRNRAAAGTSAHLAFVRSAGPGAPEVRALGVQVELRHPDRPQRAQLYPANGHAGVSAAEIPLSLPGGRTTPVTVTWRDATGLHRAEVDVAPGRRTVVLNGNGTAVVR
>NZ_CP034550.1|WP_084716348.1|2847386_2848379_+|DUF1702-family-protein
MCAAFAAGGAVGEPFALPGAAAAVGRLLGLVRLPPSLADFGRRGFRTDRPHARAVLEAHARSFLVGFDTGARAWRDPHAALAEVDPEERGFAYEGAGMFARALDLATAGRARALRRLLAGPGDGYAHLVHVGAGWPLASARLRLPTPPPPTPLLRWLALDGAGFAETFFGGARALARRCRTAPGPEAEAVLAGCGRAVWFLQSADADGVAGLVAALPAPARPALWSGVGLACAYAGAADDACRARLVAAAGPHRAHLAQGVAFAAGARVRSGIVPAHTRAACEQVLGVAPERASAWTEVAARGLTGSADVHAYQAWRARLRELVAPVAPH
>NZ_CP034550.1|WP_084716347.1|2844898_2847076_-|CRTAC1-family-protein
MAPMSRSRRLSLCVIASTAASVIVTPAAGAVPSIGGVAFTEIARPGTAMATYRRIPSPEHAIREANRLRPAVKFAEFANEPVFSHGIPGVVVFDYDGDDDLDFYVTNGPGRANSLYQNQLAQTGRLEFVDMAPWTGVSLTSQDSNGACAGDIDNNGHTDLYVLGRNENNRLLLNRGNGTFADVTGAAGDASGGTYSHASCSMGDVNGDSLLDIAVANTWDMKNALPIFAVPYQYNQPNQLLRNVDGLRFTDVSAAAGIAQVDVRDVPPGATAPFNDLSWALSLVDYDQDGDLDLMTASDQAAYRITKHGGHDRGFVRLWRNDGDGYFDEVTFDAGLGEPGMWMGLSYGDFNHDGNLDVFATNGGDYLTVPLPQMPRQLGDASSRWFLQRPDHTFADPRRSSLHLPAQNGADPDLGTLNATPWGWGTSAIDYDNDGSTDLLYHGALDGMGMVTAENPGALLRNRGPQVGAGAFYPSFDYDDVLTRAGTDHRRRTVIGVATGDLDRNGWVDVVSVAQSLKVGRLVPINDVVPFDFDSPFDANAAILRIFQPTAADPTTWAPTGSTTTEGDLSVEVNNGGNGNRSATVRAVGSVGLAPGARVNRDGIGAIVRFTPTDGPTAMRPVLGGSSFASQDAFEATFGLGRVNAGVVEVLWPGGVRNRLYNVRAGERVVFPEIPCGFDTRDMTAAQYRACVDNAVNALVAAGRITAENATRFANSARRAFNESR
>NZ_CP034550.1|WP_033430888.1|2844362_2844761_-|hypothetical-protein
MRYMLLFYGCDRPQPGDPRFEGALARTNAFTEECRKRGAFVAAGPLKPVHTATTVRVREGRTLMTDGPFAETHEQLGGYCVLECPNLDEALELAAMAPMAYEGSVEVRPMDEIPGWDDSPSAALTRSAAGSA
>NZ_CP034550.1|WP_051765611.1|2843109_2844366_-|sigma-70-family-RNA-polymerase-sigma-factor
MTDRSPAAVAERVYRDHRGRMLAALVRVLGDFELAEDALQDAFAAALRRWQPSALPDDPVAWLLSVARNRAIDRIRRARAGRVADAGGEPGRGAVMTMTEYGEDRLLGVGDDQLSLIFTCCHPALSMDARVALTLQAVAGMTAAEIARVFLVGETTMAQRLVRAKRKIRDAGITFEVPPDHRLPERLASVLAVVYLVFTQGYTAPRDSPQHDQLRAEALRLGKLVATLMPDEPEALGLVALMLLTDSRRETRYTTSGDIVLLEDQDRARWDRAQIAEAVGLLRRAARMGAPGPYQLQAAIAAEHARAPSGERTDWPAIAELYRVLLELAPSAVVALNHAVAVSMAEGPEAGLALVDGIEGLDGYHLLHAARADFLRRLERADEARAAYRRAHELAANPADRRFLAGRLRELGEAVGDE
>NZ_CP034550.1|WP_051765610.1|2841453_2842887_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MAATGTTPGSDAALQRWTLILGSLSSFLVGLDALVVTTALPTLYQEFGTGIEGLSWTVNAYELAFAASILTGSSLGDRFGRRLMFVVGIAVFTLSSAVCALSPNVETLIAARVVQGIGGGIAVPLALALITEVTPPQARGKALGIWGAFTGLAVAAGPLVGGAIVDGLAWQWIFWLNVPVGAIIAVLTLGKVIRGTRTEARFDPIGLVLATVGVFGVAAALIRGNAAGWDSPWVLTGLIGGVVVLVAFVLYERRTASPMMPMRLFGNRSFTGGCVAGFILMAGIFALGFLTAQYLQLALGRSPLSVGLGLLPATAVSLFIAPVTGRLADRIGEKPLIMLGLGLQALGLLLISALVTDTSGYGTIVGPLFVIGFGIAIAFPTVTTAVMRSVDPREAGIASGTSNTFRQVGAVFGVAIATAVFAGSGSYRTPAEFVSGFKPAFLVLGLLCVVGVGVGAMVRRHAATARPAGSPVPRHAG
>NZ_CP034550.1|WP_153278046.1|2839921_2841337_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MANPAPTGDPLPRRTAAAVFALSLASFVVMVDSTVVQVMLPALMAELGAGLAGVLWVANGFTLVYGVLLLPAARLGDVHGRRNVLVVGLAVFLVGSLVCGAAPALPPLVLGRVVQAVGGALIVPQVLGMIALAVPGHRRGLAFGFVSASMALAAVVGPVLGGAVVSFAGWRWVFLANAPGCALAVAAVLWASPGREPRHGRELDAVGTLLAMGGLGAVVYGCVAAGRSAGGAVPAAVGAVLLVVFVLWERDRPEALVPVRLFGVRAFSVALWLGVLQFVLMSGLMLVVALEVQAVRGGTAFETGLALLPMAVLAGVASPFAGHATDRWGGRPVITCGFLAVGTGVAWAAAVPSLVGPLAVVGLGVGLLMGPISTEVVRDLPERLVNTGSGVLATGRQVAGALGVAVVGAVLQTAAAAGGGVDPVRFAAAERVALVLLGVLAAVGAVGAWFLPGRSGREDRAVVPGRAVGSG
>NZ_CP034550.1|WP_033430800.1|2839323_2839686_+|VOC-family-protein
MGNPLSYFEITTKSDAAALQKFYGDMFGWQINVLPQMGGYGLVSTGGEVGGGIGPAQSHAGVRVYFHAEDLNAALEKAESLGGKIVMQPTKISDDFGSFAVFTDPDGNEVGLWDRPGLQG
>NZ_CP034550.1|WP_033430799.1|2838153_2839188_+|alpha/beta-hydrolase
MVGRPTRVVALAALLLTTHTAAAGAAGGGFAPVHREGPALSVPAERLDASLTCTGNLRGATGEPVLLLAGTGVNSDQYFGWNWKHALTRAGIPWCASDVPGPASANENFADIQVRAEYVVHAIRTMRAVAGRRIGVLGHSQGGLVPRWALRFWPDVRPMVDDVVALAPTSHGTPLGTLMCPAMCPAAVWQQRTDANFVRAVDSHRQTFRGISYTVLSSHADPLVPPASADLTGPGWVANVRLQDACPADTADHDGVGTTDPVAEALALDALAHRGPADPARLDPAVCSRELMSGADPATHAADSAWMKQVRDLNYGQAPRLEREPELACYTTISGCPRAREGDG
>NZ_CP034550.1|WP_033430798.1|2837552_2838110_+|carboxymuconolactone-decarboxylase
MPHITMPAQSFPGTPGLMQYRQETGRPLSELAEVLLRDDNTLSRSDRELIAAYVSSLNDCYFCRHTHGEMSVQQSDDEDARAVLEKVVADLGSAPIPAKLKALCAIAGAVQEGGRAVTAELVGRAREAGADDTEIHDTVLIGAAFSMYNRYCDGLAAVVPEDPSAYVPMAAMIIRDGYSMCARGH
>NZ_CP034550.1|WP_033430804.1|2856868_2857291_+|acyl-CoA-thioesterase
MTAYVYRHRVTFDETNVVGNVYFAHYLHWQGHCRERFLADHAPGVLRAVRAGDLVLATVSCEMTYYAECFALDEVEVAMTPRDFGGHRVVMDFDFRRDGRLGARGSQVVACLRRTGSGTEPVGLPAELVEALRAHAESRG
>NZ_CP034550.1|WP_033430805.1|2857292_2857823_+|hypothetical-protein
MTANPGTGSRGTGRLAAVNAARHRRWLAVFMVVVAAHWVEHLAQAAQIYLLGWPVHAAGGALGLAFPWLVHSEWLHYGYALAMLAGLVLLRPGFAGRARTWWTAALVIQVWHHFEHLLLLLQALTGWHLRGRAAPTSLVQLVVPRVELHLFYNAVVFAPMVVAVVLHRTQRTVQQG
>NZ_CP034550.1|WP_033430806.1|2858018_2858471_+|hypothetical-protein
MTATAEPSAAAPELDTAGLLAAYRRDFTPAAKAFVEGGISARELRERWLPYFRGPFLDYELSVQAAWRAAHGPDRGIEPGPPDADPAHAEQLRHFPVTISHNNLERLVDVLAVELGDRTAADTVTPERVLDLAHVVDALDRLMHSLVLTP
>NZ_CP034550.1|WP_033430807.1|2858554_2859277_+|hypothetical-protein
MVEALRAARAVTGADGSALSNADIVKGHDLAWGGPGNLYTIRPYTLGPAALEVFTVRERIHVLVDGLGEDLVDLHGVGVYRRHEPRIGAEGADELTWTTATIGAQFLSLQVVGDSEVLGQVRVTNTPGRREGATVAPARPGGGRVTPLKNCVTLLFPRFEIEHLGATVDTGDEPVAVESRVNMVPPIGDVSRTSRGYALYDGDRRVGTLLAADLEIGALLHHIPIQTAKDPVEAYAVTAE
>NZ_CP034550.1|WP_033430808.1|2859287_2860016_+|hypothetical-protein
MTTGRTTGRVRANLGAGPLGSYAFRVEATLGHRPTSYLFARSTGGGGGVGERAVTVLLVLAPAALAGTRVTVRESRGADLAEVTTFLPTMRVPKVVSAAHVFECLPLTDVGYVDLMSWLHPPAREVPAGPPGPWSAWHDRPGTTRVSEAAHGYRVVETVSAEHGIPVARSTVLDGEETRRWEAVALGSPEWDHLPTRIRVTRPRTGHWTVFERTTDPRPVPPEWVEADSATLRRAAASVLEG
>NZ_CP034550.1|WP_153278047.1|2860147_2861332_+|phosphotransferase
MALERLGGAFLKGGQFLGTRRDLVGPVLATALGRLQDDVRAMPVADALAVVGAARVEHAGAVRAAVLAGPVAGGSIACVYRAELPGRAVAVKVRKPAAVRQVTADTRVIRAAARLAARVPACRGVPLTDIADQLCRCVLDQLDLDRERRNLERFGELVRDAGGITVPGVVAGMCGPGVLAMDFLDGLDRSGCAALPEAERTAAVEALVRGMYDALFRHGFVHVDLHQGNAYFRRGRDVVVVDFGFVHQLGALARARFTGFFAGMIDGDGAGCADTLLATARSVADDADLAGFRRDVADLVVRNCGRAVEDFSLPLFAASLFDLQRRHGVHADPEFTFPLLGLLALDGLVREHHPGMDFQLEAAPFVMAGLLEAADDGRPGAGVRTGPASGCSGG
>NZ_CP034550.1|WP_033430809.1|2861294_2861945_-|crotonobetainyl-CoA--carnitine-CoA-transferase
MSVRRDYGQFCGLAAGLNIIGERWTLLIVRELLVAPMRFNNLLDNLPGIGPNLLTDRLRMLTEHEVIEQLPVEGDSRGKMYRLTALGEQLRAPVLSLARWGMGFLREGDAKKTVRDEWGFLALQAMIDHDRIPDVDETYEFRVGDHSFAIEVRGGAVSFVPGSVPLPDLTIACAADTFVRIGARLLSPFDAIVTGAVKVDGDPEVIHRCTRMLGLS
>NZ_CP034550.1|WP_051765619.1|2862198_2863098_+|putative-selenate-ABC-transporter-substrate-binding-protein
MRTTLSLLVCLIVLPVAACGTSPAAEHHDAGLRVGAIPDQDPQKLQRMYDVVSDYLEADLGTPVEYVPVRDYAAAVAQFERGDLDLVFFGGLTGVQARARVPGAVVVAQRDVDERFRSVFVANTAAGLPPLGGVADLARLKGHSFTFGSDTSTSGRLMPQFFLDEAGVGLDAFTGEPGYSGSHDATIKLVESGAYQVGALSASVWDKRVAEGGVDTSRVAEVFRTPPYHDYHWLARPDLDRRLGAGFTDRVRAALLACDGGDDREKQVLELFAAGGFTAARAEDYAQIEAVAGRLGLLR
>NZ_CP034550.1|WP_153278895.1|2863124_2863859_+|ATP-binding-cassette-domain-containing-protein
MRGAAVRLGGADVLSGIDLRVAAGERVALIGPSGAGKTTLLKLLNGTVAATRGRVRALGCEYGRSSARRTRAARHRIGTVHQHFDLVPQLRVVHNVNAGRLGAWPLWKAALSLVRPFEARAAQAALERVGIGDKLRERTGDLSGGEQQRVAIARVLVQRPRVVLADEPIASLDPARAREVVDLLFAVSAEAGTALVASLHDLDVALGRFDRVVGLRAGRVVVDAPPREVGDAEVARLFRTGGSP
>NZ_CP034550.1|WP_153278048.1|2863855_2865529_+|ABC-transporter-permease-subunit
MTLATRPPGELVGCRPTGAVPRRPGPRRRARRWWLLACAAAVVAAALPAFAGGTPVVRVEGLGQLGEFFAAAAHPRLDGPFAALVAGSAATTLAYAVLGTAVSLVIGLVGGVLTSQVWWRVDAPGRRVRDVLAWGAARLAFVVPRGVHEVVWGLGLLVVLGRGPVVAVLAIGIPFGAVTAKVFAELLDEADRAPYEALLAAGAPRPVAVLHGLLPAALGDLLSYAFYRLECAIRSATALGLVGAGGLGTELLDSFRALVYGEMWTLLYALVVLSAVADGWSTAVRARLAGPRGRPDPLVAGSVVLVPALVACSAWWVRLDPSVLWDDRSAHQALVLARQSWPPAAGEGGIAGLVRLCGTTLAMSVLAVAVAFVLGALLALPAAALPQLDRTGAARLRRLPAVLLARSAMLLLRAVPPPVWALLALFAFHPGVVPGAVALGAYTAGVLGRLMAEAVDNLDGRPLRALGALGASRGGVLCYGVLPAAAGRFAAYGLYRWEVTVRETVVVGVVGAGGLGVVLQHQLNSFHFDRAAATVLAVVALTAVVDLVSAAVRRSVR

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Crispr_ID: NZ_CP034550_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_6

3226043-3226875

Orphan

Consensus_repeat	Method
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	CRISPRCasFinder
NGCNCNGGCCCTCCGGGNNCCNGNGAGGATCGCAA	CRT
CGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	PILER-CR
GCAGCACCGGCCCTCCGGGACCGGTGAGGATCGCAA	PILER-CR
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	CRISPRCasFinder

11 spacers

The CRISPR arrays of NZ_CP034550_6

>merge|NZ_CP034550|6|3226043-3226875|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,CRISPRCasFinder
CAGACGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACCCGGTCCCACACCGCGTCGCGGCCGGCGGCCAGCTCGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACGCTTCCAACTTGGCGTGGACGCTCGCCGCGGTACTGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACGATGCAGCTTGACAAGCAGTTACACGCAGTTGTATGCGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACTTCCTGCGTGTGCGATAGTAAATCGGGGCGGCGCCGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACCCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTGCAGCACCGGCCCTCCGGAACCGGTGAGGATCGCAATCCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTGCAGCACTGGCCCTCCGGGACCGGTGAGGATCGCAACTGGACCAGCGTCAGCGCCGTCTCGACCTGCGCCATGCAGCACCGGCCCTCCGGGACCGGTGAGGATCGCAACCACCGACCCGGCCGGGCACTGGGTGCCCCTGGGGCCGCAGCACCGGCCCTCCGGGACCGGGTGAGGATCGCAACGTGTTGACGCTGGCGACGCCGGAGCGGACACCGACGTGCAGCACCGGCCTTCCGGAACCGGTGAGGATCGCAACTACCGGGACGTCGCGCTGTCGGACGACATCGCCGAAGCAGCACCGGCCCTGCGGGACCGGTGAGGATCGCGCAACCCCGCCTTTCGACGACCGCCATGATGACGGCCAGCGTGGCACCGCCTCTCCTGGACCGGTGGGGATCGGA

>NZ_CP034550|6|5|3226043-3226583|CRISPRCasFinder
CAGACGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	CCGGTCCCACACCGCGTCGCGGCCGGCGGCCAGCTC
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GCTTCCAACTTGGCGTGGACGCTCGCCGCGGTACT
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GATGCAGCTTGACAAGCAGTTACACGCAGTTGTATGC
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	TTCCTGCGTGTGCGATAGTAAATCGGGGCGGCGCC
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	CCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGT
GCAGCACCGGCCCTCCGGAACCGGTGAGGATCGCAAT	CCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGT
GCAGCACTGGCCCTCCGGGACCGGTGAGGATCGCAAC	TGGACCAGCGTCAGCGCCGTCTCGACCTGCGCCAT
GCAGCACCGGCCCTCCGGGACCGGTGAGGATCGCAACCACCGACCCGGCCGGGCACTGGGTGCCCCTGGGGCCGCAGCACCGGCCCTCCGGGACCGGGTGAGGATCGCAACGTGTTGACGCTGGCGACGCCGGAGCGGACACCGACGTGCAGCACCGGCCTTCCGGAACCGGTGAGGATCGCAAC	TACCGGGACGTCGCGCTGTCGGACGACATCGCCGAA


>NZ_CP034550|6|2|3226046-3226875|CRT
ACGCTGGCCCTCCGGGGCCAGCGAGGATCGCAA	CCCGGTCCCACACCGCGTCGCGGCCGGCGGCCAGCTCGCA
GCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAA	CGCTTCCAACTTGGCGTGGACGCTCGCCGCGGTACTGCA
GCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAA	CGATGCAGCTTGACAAGCAGTTACACGCAGTTGTATGCGCA
GCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAA	CTTCCTGCGTGTGCGATAGTAAATCGGGGCGGCGCCGCA
GCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAA	CCCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTGCA
GCACCGGCCCTCCGGAACCGGTGAGGATCGCAA	TCCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTGCA
GCACTGGCCCTCCGGGACCGGTGAGGATCGCAA	CTGGACCAGCGTCAGCGCCGTCTCGACCTGCGCCATGCA
GCACCGGCCCTCCGGGACCGGTGAGGATCGCAA	CCACCGACCCGGCCGGGCACTGGGTGCCCCTGGGGCCGCA
GCACCGGCCCTCCGGGACCGGGTGAGGATCGCA	ACGTGTTGACGCTGGCGACGCCGGAGCGGACACCGACGTGC
AGCACCGGCCTTCCGGAACCGGTGAGGATCGCA	ACTACCGGGACGTCGCGCTGTCGGACGACATCGCCGAAGC
AGCACCGGCCCTGCGGGACCGGTGAGGATCGCG	CAACCCCGCCTTTCGACGACCGCCATGATGACGGCCAGCGT
GGCACCGCCTCTCCTGGACCGGTGGGGATCGGA

>NZ_CP034550|6|1|3226115-3226370|PILER-CR
CGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GCTTCCAACTTGGCGTGGACGCTCGCCGCGGTAC
TGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GATGCAGCTTGACAAGCAGTTACACGCAGTTGTATG
CGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	TTCCTGCGTGTGCGATAGTAAATCGGGGCGGCGC
CGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACCCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTGCAGCACCGGCCCTCCGGAACCGGTGAGGATCGCAAT	CCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTG
CAGCACTGGCCCTCCGGGACCGGTGAGGATCGCAACT	GGACCAGCGTCAGCGCCGTCTCGACCTGCGCCATGC
AGCACCGGCCCTCCGGGACCGGTGAGGATCGCAACCA	CCGACCCGGCCGGGCACTGGGTGCCCCTGGGGCCGCA
GCACCGGCCCTCCGGGACCGGGTGAGGATCGCAACGT	GTTGACGCTGGCGACGCCGGAGCGGACACCGACGTGCA


>NZ_CP034550|6|2|3226404-3226729|PILER-CR
	GCTTCCAACTTGGCGTGGACGCTCGCCGCGGTAC
TGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GATGCAGCTTGACAAGCAGTTACACGCAGTTGTATG
CGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	TTCCTGCGTGTGCGATAGTAAATCGGGGCGGCGC
CGCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAACCCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTGCAGCACCGGCCCTCCGGAACCGGTGAGGATCGCAAT	CCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGTG
CAGCACTGGCCCTCCGGGACCGGTGAGGATCGCAACT	GGACCAGCGTCAGCGCCGTCTCGACCTGCGCCATGC
AGCACCGGCCCTCCGGGACCGGTGAGGATCGCAACCA	CCGACCCGGCCGGGCACTGGGTGCCCCTGGGGCCGCA
GCACCGGCCCTCCGGGACCGGGTGAGGATCGCAACGT	GTTGACGCTGGCGACGCCGGAGCGGACACCGACGTGCA
GCACCGGCCTTCCGGAACCGGTGAGGATCGCAA

>NZ_CP034550|6|6|3226694-3226803|CRISPRCasFinder
	CCGGTCCCACACCGCGTCGCGGCCGGCGGCCAGCTC
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GCTTCCAACTTGGCGTGGACGCTCGCCGCGGTACT
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	GATGCAGCTTGACAAGCAGTTACACGCAGTTGTATGC
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	TTCCTGCGTGTGCGATAGTAAATCGGGGCGGCGCC
GCAGCGCTGGCCCTCCGGGGCCAGCGAGGATCGCAAC	CCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGT
GCAGCACCGGCCCTCCGGAACCGGTGAGGATCGCAAT	CCGCGAGACCCGTGGCTTCGGGCCCTCGCCCGT
GCAGCACTGGCCCTCCGGGACCGGTGAGGATCGCAAC	TGGACCAGCGTCAGCGCCGTCTCGACCTGCGCCAT
GCAGCACCGGCCCTCCGGGACCGGTGAGGATCGCAACCACCGACCCGGCCGGGCACTGGGTGCCCCTGGGGCCGCAGCACCGGCCCTCCGGGACCGGGTGAGGATCGCAACGTGTTGACGCTGGCGACGCCGGAGCGGACACCGACGTGCAGCACCGGCCTTCCGGAACCGGTGAGGATCGCAAC	TACCGGGACGTCGCGCTGTCGGACGACATCGCCGAA
GCAGCACCGGCCCTGCGGGACCGGTGAGGATCGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_084717150.1\|3238769_3240908_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224657
NZ_CP034550.1\|WP_084717135.1\|3233855_3234152_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_153278906.1\|3217939_3218395_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238816
NZ_CP034550.1\|WP_033435361.1\|3228562_3230272_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226121
NZ_CP034550.1\|WP_033435337.1\|3225136_3225952_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278106.1\|3237058_3237520_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_153278102.1\|3224202_3224688_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238042
NZ_CP034550.1\|WP_033435339.1\|3223795_3224203_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278101.1\|3223645_3223786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278100.1\|3210609_3217455_+\|type-IV-secretion-protein-Rhs	unknown	unknown	gnl\|CDD\|225750
NZ_CP034550.1\|WP_033435340.1\|3217451_3217808_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278103.1\|3232169_3232964_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278104.1\|3234051_3235134_-\|transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP034550.1\|WP_033435360.1\|3230271_3232032_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP034550.1\|WP_153278105.1\|3236463_3236940_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_051766937.1\|3222923_3223403_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278099.1\|3207217_3210577_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP034550.1\|WP_084717151.1\|3237969_3238773_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_063741534.1\|3227408_3228224_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350237
NZ_CP034550.1\|WP_051766938.1\|3219362_3222680_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_084717135.1\|3233855_3234152_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.12909e-12
NZ_CP034550.1\|WP_153278906.1\|3217939_3218395_-\|hypothetical-protein	gnl\|CDD\|238816	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family. It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation).	6.46995e-27
NZ_CP034550.1\|WP_153278099.1\|3207217_3210577_+\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	1.56715e-23
NZ_CP034550.1\|WP_153278106.1\|3237058_3237520_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.65737e-10
NZ_CP034550.1\|WP_153278102.1\|3224202_3224688_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.22228e-06
NZ_CP034550.1\|WP_153278100.1\|3210609_3217455_+\|type-IV-secretion-protein-Rhs	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	9.87406e-20
NZ_CP034550.1\|WP_033435361.1\|3228562_3230272_+\|AAA-family-ATPase	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	3.05819e-46
NZ_CP034550.1\|WP_153278104.1\|3234051_3235134_-\|transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.37539e-14
NZ_CP034550.1\|WP_084717150.1\|3238769_3240908_+\|SAM-dependent-methyltransferase	gnl\|CDD\|224657	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair].	4.96309e-31
NZ_CP034550.1\|WP_153278105.1\|3236463_3236940_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.33267e-27
NZ_CP034550.1\|WP_033435360.1\|3230271_3232032_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	4.25078e-63
NZ_CP034550.1\|WP_063741534.1\|3227408_3228224_-\|NYN-domain-containing-protein	gnl\|CDD\|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.4162e-68
NZ_CP034550.1\|WP_051766938.1\|3219362_3222680_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	5.69934e-11

>NZ_CP034550.1|WP_033435337.1|3225136_3225952_-|hypothetical-protein
MNPFLQGLGGKLAERWVTALVLPGALFVVAVVCAIRLGHHNALDVVRVGNDIVSAFPRLPLAVAAVGMLLGAAAAAFTAQALGTLVQAVWVKPWRGPAAWLARLVVAVRGWRFDRAAAKAGVDPVPAYRPQRATWIGERFRLLDTRVAAQYQGLRLGPLWPRLWLLVPESARLPVQTAEIRFHSSTTLTGWGVLYGALGPSWYPAAVIGFAVAVVGWRRSRAGAAALTELIEATVDTHLDVLTTSLGAPLPATGLTRDLAARINDRFTKGE
>NZ_CP034550.1|WP_153278102.1|3224202_3224688_+|helix-turn-helix-domain-containing-protein
MRWRPPVLTVDREVHLDGRGLLVVPCYFGSHHPVASTDSAMRLVLVFPVRPEFRFAAHHNTSGDLGALLGPTRAAILRSTLAANTTAGLAKLNDISPATVSHHTSVLRNAGLTTTHRRANAASHLITPLGLRLLDRCRAVPARPAGRRSGWSPQCGSTGRS
>NZ_CP034550.1|WP_033435339.1|3223795_3224203_+|hypothetical-protein
MRDLVAMDRKVFEAVRALTAMAPFAARLPDLLTPGLDLPDPDTGADVVPFTSPARLLDEIDRLWETTGATAWLDDLARGDRRALRWLRTALHTYVTEVVEPHRRTIEQALGDERADRLHTYLRYGADGLLAGSSH
>NZ_CP034550.1|WP_153278101.1|3223645_3223786_+|hypothetical-protein
MPVLRIHFTGTDLGRTRVETETNLMWEVVSSVQLLRHDEGAVHFSW
>NZ_CP034550.1|WP_051766937.1|3222923_3223403_-|hypothetical-protein
MAKRKFALFASAAAVAALLTMTLSAPASASSSASDAPADRYAGGPATTAVDAEFNQAVAGTPPSGLPCVSTTGATACFEANGDKWWVRDTAADSASAEAFWENYRGGSLYRTGVCRNSLGNGKWGVCNKNYYEDSGLRWSACVYDASAGTLIRCSQWYP
>NZ_CP034550.1|WP_051766938.1|3219362_3222680_+|CHAT-domain-containing-protein
MTGEVAEHRNVVTGDGGKCVVVQGRDIRGGVAVTVESPGSSWRAPRQLPLPVAGFVGRIQEQEALDGMLEDGSGAAVISALAGTAGVGKTALAVRWAHDVRDRFPDGQLYVDLRGYDAQPPVSAGEALAGFLRALGVTAVPADLDERAALYRSSLAGRRVLVLLDNARDAAQVLPLLPASPSCFVLVTSRDSLPELRVRYRARKVDLGVLTLEESLTMLSDSLGDRVRQHPADAVELVNRCANLPLALRVVAETAVARPRSTLRQLAGELGDGGESDVAAVISWSVRQLDEHRAAAFRLLGLHPGRDFDATALAALAGVTVGEAEDLVDGLARVHLIEEVHDQRFRMHDLLRNHARRLAADMDPSAAHIAFSRLFDHYLHLSGLAVEAMVGPEVTWSSLDWLPATATRPHEPDVAREWIEDEIVNLATVAAEGMRRGEYDLTLGRMLRNLGTAYRLVGDLPSALRQFGHAADLLGRRLPGTTNGIALDRAATLLAAGLASQAEAVLALHRPDFTHLEAAEADHQLAIAALVKSNHNQALRLAGRARHVFSTHGRGEPAAVSALVRLTAAAAAAAAAAAAAGHRWIPGSEELSVAAELDRCGFHDAAVVARLLVVRLRIAGGDLRAATEALDEHEREEGAPIDIVILRALCRIELFVARGEPSRALAEARAALEGIDRSAGPVLCRPLLDVHDRRLTALTSRLVSSALDPWQVLDVTERTRAGVARQVPTRAALHPALTDRLTQIRFLTRAIGTTSRADPTWDALHRRLARMRREAALLGWVEQAHDPVAPQHLATRLGARALVAFTEAWDGLLAVVLVDHTATVIRLGDAARSFEDVRGLHADLDAIAPDDLPGYLVDVIAASARRRAARLDEVLLEPLADRIADRDLVVLPTGVLHVLPWSTLPSLQGRAVVVAPSATAWVERHDDGRRGGGRVVVVAGPKSTPDVTRPLRHHHRVDLLANERAIADDVLSAMDNAALVHLAASSEHQPENTAFSTVRLHDRAVHAHEIGDLKQPPDIVLLDGADLQGGQAGTGAEMLGFAGGLIKAGVRTVVVAAARTGIDTGADAVREFHVAIARGESPARAVATINAGNPLRRTFLCIGHG
>NZ_CP034550.1|WP_153278906.1|3217939_3218395_-|hypothetical-protein
MYLDTPPAGSRWPDQRVRTHSRLTAGQTIRPTSGTPQVAVSRSHRPALVDGLAEVADVELVPMGSAGVKAMAVYAGEVDAYVHAGGQYEWDSAAPVAVALAAGAQASRVDGGPMVYGNRDPLIPDLVICRPELRDRLLGALAELRARGVPA
>NZ_CP034550.1|WP_033435340.1|3217451_3217808_+|hypothetical-protein
MKVRFTGSDGFERRVSQGAASLREGAEYVVLEIFAQADGANKFRIEYSDSELPALFDSRLFEVSSDEIPKGWTITRNWNGSLTLGPKEWARPEFWEAFIDHQSWAVELYAVGRSKALG
>NZ_CP034550.1|WP_153278100.1|3210609_3217455_+|type-IV-secretion-protein-Rhs
MSVSPREWARKAVAFGVVVVLTTSITQAVAVAAESDWRVGLQEEVSSPAYPVEVRQLPRDPAAGAVVTAPAAGVVWPRAMVGEVDFAAAGGTPAQAAARATGRPVRAAGTPVAVGLRGQAGARLAKSGKVRVRVHERKFDAVVFSVSDAGGVKDKPLDVVFDYSSFGSAFGGDYASRLRLVRLPSCATTAPEKAECQAATSVEGAANDTTAGVLSASVTVSSEPVVFAATAAASGPAGSYSATSLAPAGSWNAGGSSGDFTYSYPMRVPPAVGGGAPSVSLGYSAQSLDGRTSSTNNQASWAGDGWDLSPAGFIERQYKPCSLDLGGNNGQTKTGDQCWAIDNATISLVGVSGKLVRVGTSNQWRTESDDGARIERLFNAANGDNNGEHWKVTTPDGTQYFLGLNRLPGWSEGRPETQSAWTVPVYGNHAGEECHQAAFDASWCQQAYRWNLDYSVDPHGNVTTYYYQREFNRYGRNADPAKGTDYVRGGWLDRIDYGLRSDNVFGHPGARVGFETAERCLPSGTVTCDPSQLNASTAASWPDVPFDQICGAGESCTNRLTPSFFTRKKLTKVVTRVSDGGSGFRDVDSWALEHQFLGTGDGLAPALNLHKVTHTGLVGGSVALPATVFAHKALPNRVDTGSDNRPPITRYRVVGITGEAGSHTQVEYSGADCVAGSRMPAAAESNALRCYPSWWTPDGGREPELHWFHKYVVTTVVDDDRTGASSLVKTNYTYLGDPAWHFDEAEFAEPDRRTWSQWRGYGTVRMTKGDPSGPQSVTETVFGRGMDGDRLPSGTREAWITTSEGEPVRDVERLRGFVRETRQYNAGRLVSASVNDPYLPDTPTATDAAGNKAYVTGNASVRGRTLLESGAWRRTRVDKGDFTPEGVARRTEDHGDLAVTGDETCTRSTFARNETAWLLTLASQVETVVGTCAVTASPTTIQSLARSYYDDQAFGVAPTRGLITKAEVLDKWDASGQTWVTASRATYDAIGRPLDVWDARGEKTTTDYTPDTGPLTEISSTNPLGHVTREYLDPAWGLSTASVDANNRRADLTYDPLGRLTAAWTPGRSKAEGHTANAAFEYQYNNDKPSVVVTKQLQDNNRYLAAYTLYDGLLRERQTQTPSPGASGGRLVTDTFYDSRGLPYKTNSLRWNAEAPNGTLAGSLDNEVHSQTVTEYDGMGRPTAAIFKKLGIEQWRTTTSYGGDRVKTTPPQGAAATTIISDAQGRTVEKRQHTAGVDSPFDATRYAYNAAGLLTTLTDPVGNQWRYTYDLRGRVIATDDPDTGHSSVTYNAAGQVLSSTDAQGRTVANAYDKLGRLTAKHQDSLTGTTLSSWEYDTLPGGTGLLTSSTRFTDGQAYKRQVHGYDIAGRPTGELVTIPSTEGVLGTTYQVRQTYHPLTGKPATTGYMSVFSGDREIVSKEAVTSAYNTTNGVLEKTVGNQVYVDSTIYSSFGEVLELTYDNAAPNAAKNLQVTNFYELGTRRLERTIASRETTTDNRLADRTYTYDPAGNITKVADTPGSRVPDTQCFAYDHLQRMTEAWTPGSGDCTATRSATALGGPAPYWHSWTFDKTGNRLTETQHAAAGDTVRTTTYPAAGAAQPHTARSVTTTSPNGTSLDTFDYDSTGRTKTRKIGGDTQTLEYDAEGRVSRIVNADGKESKYLYDADGSRLISREPSATTLYVFGQEIRLETGTSIPSWTRWYSHGGQTVAVRNSVTGLKWLIPDHQGTNQITVAKDANLTVTQRRQTPYGAQRGPTPGAWPDRLGFVGGRNDESGLTSVGARLYDNASGRFLSADPVIDNNDPQQLNGYAYANNSPVTFSDPTGLIRDCGPDGVFCGIDKRLHATGTTDKSPQFRAERQAAQNYKRAVQQYTKAVADETAKAMASQGISKEDYERALADAHKTKWDVIKEVAWDVLKEISGWNDIVDCFTKGDIWGCAGMVAGLVPWGKVGKILEAGWNAIKAVDRLASIVSKAQGVLRRVQGIAEQATRAVTEKFQKLISGGGGSCPVKHSFVGTTLVLMADGSTKPISEVGIGDRVKATDPATGETTDREVVATIVHDDEGDMTRLTVAGQDGTTGSVEATSWHPVWVNAEGRFVKISDLRPGQVLTSADGTSPQVTDVDRYTHYEPVYDLTVEGVHTYYVVAGADDLLVHNNNGCGVTPHDGGTHDEHDNFISGSAEGQKLADQLREESANSLFAGDGTLVPEVLGDSPQVMAGEQMGNTALQVRFAQSGGAAEWGKYSTPTHQSPYGPFQVHFYHNPGSGEVMYDFDYKVVMNRRKSG
>NZ_CP034550.1|WP_153278099.1|3207217_3210577_+|hypothetical-protein
MALGVVVPQQAVAETPGVEADEATASRYAQARGESVVVESATTETDELRANPDGSFTFTQHLQPVRVRRDGGWVPVDLALERRADGMFGPKAAPVDVVFSPGGVGSADDAVARVARDGHAVGLGWGEDLPPAVVDGASLTYPEVLPGVDLKVEATLGGFSEVLVVKTPQAGQSEELERIAFRTHAEGVRVEERSDESGALVVKDAAGTPVLSGDASSMWDSSGGSPDNHTEGPAEGDRRAEMDVEVGADTVAVLPDREFLAARDTTYPVLIDPGYYCPNCGKVHHVVVQEPWPDARNFDRTDGALGDLKAGFLNAASLNAGRNGRSRTYLQMHTAPIVGKYIDQATLRTTVVGTYSCSPSATQLYLSPNIDGNTTWANQPGWYYLLSESNVANNPTYCPGPSGADFDATRAVRQASNEGWNWTTFLLQAKNEGELDTSWRRFDLNPYLEVVYNSWPFMPTALGMEGWGPGGSDAIPCVTGVGRSAVFTRTPRLRARMNDPDGGIMDAMFRVFDGVAPNLSAGYTDHYTNGIPAGSFAEVTVPSGRITHDGLFTWRVWGSDHGLFTGTVDCEFEVDSVAPSAPVVSSSDYLAVDGPHGSVGRTGTFTFNPGVLTGLGGTMDVRRYGWSLNDDTAITHSAAVQSADGTVTVPITPTKVGTNVLYVTAFDRAGNRPAANAVYVFDVAGPADVKAGWTFDETGGSVAQDSAGNKPLTVTGGSFAAGYSGNGLSFSSGAAVSSGPVVDTSRAFSVSTWVKLDRVDGYFTAVSQDGGSASSFFLGYSQDVNRWTMAAPGADSNTAGTARASSTSVPQTGVWTNLVGTYDPDSDSLKLYVDGRYQGAATVATWNATGAFVVGAAKWGGARVNRFPGSVDHTLVWDRVLAAEEVATQANLAVLRARYTLDERTGTTTVDRVSGQNASLTGELLWGGYPSAAAPTEEKWLNFGSAGTGEVAAPQPVLFSSARSYTVSAWVQLSGDTGVRRVAVSGQDGAYSPFTLGYNGTRWEFSVSQSASGPVAAVALSDFEAMPGQWVHLVATFDATTGRIALFANGFRQSTFSGTTADGSGVTSRSTTGGLRFGRATVAGAATDRWTGDLDDVHVYSGLLADDDILDLCNTTFHF
>NZ_CP034550.1|WP_063741534.1|3227408_3228224_-|NYN-domain-containing-protein
MTANAKLAVLIDADNTRPGVAQALLAEVAKYGTAHVKRAYGDWTGPNLKGWKEQLLARSIQPVQQFAYTAGKNATDAAMIIDAMDLLYTDRLDGFCVVSSDSDFTRLAARLRESGLTVYGFGERRTPAPFVAACDKFIHLDNLTTDTTPEGPALPTATPTAPSPQHDTTLHTLLNQAVDAISDEDGWAPLARVGHIITTQHPDFDPRTHGHTKLANLVEATTHFDVDRRQPDQTKPPVVYIRRRTPSLSTHTNSNPSDTDEPTNAEHRTIS
>NZ_CP034550.1|WP_033435361.1|3228562_3230272_+|AAA-family-ATPase
MRIDHVRVKNFRNLADVDLVIQPGAVIVGENRAGKSNLLHAVRLVLDPTLSGSDRHLRREDFWDGLSDGADDWDPMAAREVIEISVDLVDFDHEIAVLTALSDALVQQQPMRARLTYRFAPVDTGTDEADGKVKYRAIVFGGDNDDLQLASDLRGYLYLVFLHALRDVETDLNSWRRSPLRVLLEAAADTVSEDDLGVVREAMKEANDKVNQLEEVKQVGSSISERITDIVGVNQALQTELAVAPDDPLRLIRNMRLFVDGTAHRHLSTTSVGTLNVLYFALLELGMEQRLRDLDIAHVVMAVEEPEAHLHPHMQRLLFRRLLTDDRTARSVLVTTQSPHIASVASPRSLVVLRNVDGRTEAAAAHTAELGDAEWDDISRYLDATRAELVFARRVLLVEGYAEQVLVPQLAEAAGMDLDKLGITICAIHGTHFKTYVRFCQALGIPWAVITDGDAEDAGITRAQRLVTALGESGAPETHGIFVGTTTFEYDLLAAHPTNREPCFAVLRALGTRNTGAAIDAWGATPPTQDSFIDMIDKVGGKGRYAHRLSQHRLHAPDYVLRALSYLAQ
>NZ_CP034550.1|WP_033435360.1|3230271_3232032_+|ATP-dependent-helicase
MGTLTRSIRELRENPQQWQAFQQQGHCVVLAPPGSGKTKLLTTRLAYDLFNKIPPPHGAACITLTNAAAAELRRRLDGLGVPNRSTLVVGTVHSFALRRVIAPFAALTDRPELAHASIAGDRQQTAAYAQAIDTVFGGREDQRNIRSTIEFHRRRLSPEEAWLRSGEGILEAGRLYGSLLREQGLIDFDDVVRIAVELVEDHEVVRRVLAARYPYLYVDEYQDLAPGLDRLVRALCFDDTHEAQLFAVGDPEQAVFGWTGSRPELLTELAALPGVHPVHLEHNYRCGAEIIRIANLIQRGEREVIPSREGGEVSATRCPGGFADQCRRAVTTVRTAIGRGVPLHEIVVICPHNSQCRDVTDALRNAGVPAFVRGSEYRLTQATSFVEACAAWAALGRELSNYRLGAIHQRWRQLLGLSWTREKDVALTELLLDYEYKTHDGAHQLLADLLDLGLAQGLSRPSQSDEAAEVGKMRQELISGALKDLTITGLAERARKVDRVEVTTMTSSKGLEFDVVLILGADEKRMPDFRSFNAPTQLNEDRRKFYVSVTRARDEVRIFYSGFVEWASGRPDPAGPSRFLREIGLV
>NZ_CP034550.1|WP_153278103.1|3232169_3232964_+|hypothetical-protein
MSRTEPVFNIVPAAGLYSQFAGVLAGFAFTALILLLTARLTIPGSAGPADFSSAARVLVMTLLGLILTSFNYAVIAGLAASLARLAILENFAGIVFAISAMLLFYSVALTIDAVNSASVTPDPDMVSVARNLRWLIAVIIVPVVAFFISNAIHDIVKSVPEVKHAELYAWGTVVAQIVAGSISYLYLTRFRMAVMSKVDRERAVERLSKWAFGLIIAFTMAFATYNQFGDMNGVFAAVVTYVLATFVLVVGMIFVVHLARTRPH
>NZ_CP034550.1|WP_084717135.1|3233855_3234152_-|IS3-family-transposase
MRSSAASNTYWPGKSGHYYDRCAAPPPTWHRPLDNYRSVNAVAQSFFATIKTELLDRRPWPTRTSAHKAIFEYIEGWYNTRRLHSSLGYLSPTTYEAT
>NZ_CP034550.1|WP_153278104.1|3234051_3235134_-|transposase
MPSVKRDPRLRRAVIGVDTHKHVHVAVALDDIGGRLDARSFAADQDGYRQLLDRAAGFGAKRLVFGIEGTGSYGAGLASAVRRRGLGAVEVLRTDRRDRRLRGKSDTIDAENAARAVLNNTATAVPKTNDGTVEMLRQIKVAKDVAVKARTSAMITLKAVLVTADPELREQLQPLTKTALIHRRAGLRPGTVDSVTSATKHTLRAIARRWQHLDEEIKAHEALPGELTTRLVPQPVDAFGIGADTASEMLIVAGDNIDRVRSEPARARLCGVAPIPASSDMAHRHRLNRGGHRQANAALYRAVIVRMRLHQPTITYVARRTTEGKTKPEIIRCLKHLLAREIWALLRPLRSTATNVAQAA
>NZ_CP034550.1|WP_153278105.1|3236463_3236940_-|DDE-type-integrase/transposase/recombinase
MTDATRIRTGEGAFWLAAVRDAFSNRIVGWKTSDRCDTDLVLGALEYAIWSRDVRDGQLIHHSGRGSTYTAFRFTERLQDNGILPSMGSGGDSYDCETGSRYQAACLLLMTDPAGWLSLLLICRPPGGAPPSGAGRTGSDLIAPLYVKWWCPWRLVDL
>NZ_CP034550.1|WP_153278106.1|3237058_3237520_-|IS3-family-transposase
MELDPAGRGRPRRAGRPAHRGRVGGAAPAAQGERGTEAGQRDPQGRVRVFRGGTRPDPATVAKLVEQLRGRFGVEFVLRVLGVASSTYHGWVARQAAPSRREREDRAITAEIADIHIASGRTYGSPRVHQILRRRGVRVSRKRVGRLMRQAGL
>NZ_CP034550.1|WP_084717151.1|3237969_3238773_+|hypothetical-protein
MTNSEISTRSVDLFVACCDARQRGVLIKRESRRDKEFHFQNWVGDRLKDAEIPCVPSGRNTYPDFNLVDATEGFEVKGLETPGRVKDFDSNSRMPSGWHDGKTVYYVFGRYPKSPSELTFPVLDLVVCHGDLLNADHEYEHLNDSFRGNGAYGDLLIRDRKMYVVPTPYALADGLTGQFTLIVPASVRVDDDRLVQVGELERTEASHVVASYTFDLERNKLTTTLRPNPTAGTRHTFSAYRMRGADSGRVTMSGKFLNDQLTIGEIE
>NZ_CP034550.1|WP_084717150.1|3238769_3240908_+|SAM-dependent-methyltransferase
MTLFDIAPEIADQDEIVVRSVPVVTALETDFPAVEFSKLGEHESWRKEVFRPATSTHKWWAKRLGSVFRGILASAVTETSEEALNLYGSAARLKLSVFDPFSGSGTTIVEAVKMGASAVGSDINPVATLVQRQAVLRWDSGKLEQLYKTVEEACREEVDRVHRAESGETVLYYFWVATAPCVNPACGRSIRLFSSHVFSQNAYPKRVPAAQIVCPVCLDVIPGRYDFKSVECRNGHTVERAGAVSRSTATCPHCQSVTKPLAALQGQRPGYEMYAKMVLDKDGGKRYEPVTDWDRALYSECTGLLDAQRDTLVVPAGGLETGVNTRQAMSWGFTNWVDFFNDRQLYSLGLLASAIRDVAEDGFEREALVALFSGVLEFNNMFCSFKGEGTGAVRHMFSHHILKPERTPLEAHPWGTPASSGSFSTLYKSRLQRAHAYKTSPTDQVLLGEKIQRLGGLSRPFAVTSTDQLPTGDQSPTVFLMTGDASETKLRDGSIDLVITDPPYMDNVHYSELADFFHSWLRKIQPYAGYPVDQSSTRSKNEVQSPSPEGFGAAITRVWRECFRVLRPTGLMAFTFHQARMSGWKALVESLADAGFVVTAVQPIQGEMSTSVTKYGAEASNLDSVVVCRKSSQVSRKRDAESEAATGYERIVLLRKAGIKVGAGDVRSVIRGRVLSVYTHDPSAFDLEELARQADALAQVYVDRHLAEIKKK

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Crispr_ID: NZ_CP034550_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_7

3860234-3860335

Orphan

Consensus_repeat	Method
GGCCCCGCTGGATCACTCCCGTCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_7

>merge|NZ_CP034550|7|3860234-3860335|CRISPRCasFinder
GGCCCCGCTGGATCACTCCCGTCGGCGGAGCCGCCGGATCACCTCGTCGGCGGGGCCGTTGGATCACTCCGTCGGCGGCCCCGCTGGATCACCCCGTCGGCC

>NZ_CP034550|7|7|3860234-3860335|CRISPRCasFinder
GGCCCCGCTGGATCACTCCCGTCGGC	GGAGCCGCCGGATCACCTCGTCGGCGGGGCCGTTGGATCACTCCGTCGGC
GGCCCCGCTGGATCACCCCGTCGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033434064.1\|3865566_3866820_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238861
NZ_CP034550.1\|WP_051766621.1\|3849204_3850443_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|172015
NZ_CP034550.1\|WP_033434066.1\|3858054_3859050_-\|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|130256
NZ_CP034550.1\|WP_033434020.1\|3848787_3849009_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716942.1\|3853286_3853862_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|153233
NZ_CP034550.1\|WP_033434019.1\|3850387_3851011_-\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|223678
NZ_CP034550.1\|WP_033434008.1\|3868914_3870750_-\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP034550.1\|WP_084716931.1\|3863332_3865183_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376836
NZ_CP034550.1\|WP_033434007.1\|3871908_3872340_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716930.1\|3868587_3868830_-\|SHOCT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NZ_CP034550.1\|WP_051766628.1\|3857266_3858016_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|272861
NZ_CP034550.1\|WP_084716929.1\|3870847_3871912_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378680
NZ_CP034550.1\|WP_033434017.1\|3854120_3857291_+\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226418
NZ_CP034550.1\|WP_033434014.1\|3862322_3863183_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238861
NZ_CP034550.1\|WP_033434065.1\|3859355_3860204_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187578
NZ_CP034550.1\|WP_051766620.1\|3852020_3853124_-\|cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|107204
NZ_CP034550.1\|WP_033434015.1\|3860371_3862321_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434010.1\|3867620_3868445_-\|RNA-polymerase	unknown	unknown	gnl\|CDD\|371727
NZ_CP034550.1\|WP_033434011.1\|3866859_3867603_-\|thaumatin-family-protein	unknown	unknown	gnl\|CDD\|366020
NZ_CP034550.1\|WP_153278178.1\|3851152_3851869_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227947

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033434064.1\|3865566_3866820_+\|hypothetical-protein	gnl\|CDD\|238861	cd01823, SEST_like, SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.	2.79108e-06
NZ_CP034550.1\|WP_051766621.1\|3849204_3850443_+\|DUF2029-domain-containing-protein	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	1.04741e-32
NZ_CP034550.1\|WP_033434066.1\|3858054_3859050_-\|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	2.90439e-115
NZ_CP034550.1\|WP_084716942.1\|3853286_3853862_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|153233	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	8.58377e-41
NZ_CP034550.1\|WP_033434019.1\|3850387_3851011_-\|superoxide-dismutase	gnl\|CDD\|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	8.51451e-82
NZ_CP034550.1\|WP_033434008.1\|3868914_3870750_-\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	2.22552e-131
NZ_CP034550.1\|WP_084716931.1\|3863332_3865183_-\|hypothetical-protein	gnl\|CDD\|376836	pfam02585, PIG-L, GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.	1.30708e-07
NZ_CP034550.1\|WP_084716930.1\|3868587_3868830_-\|SHOCT-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	1.98649e-06
NZ_CP034550.1\|WP_051766628.1\|3857266_3858016_-\|ABC-transporter-permease	gnl\|CDD\|272861	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family. The seed members for this model are a paralogous family of Mycobacterium tuberculosis. Nearly all proteins scoring above the noise cutoff are from high-GC Gram-positive organisms. The members of this paralogous family of efflux proteins are all found in operons with ATP-binding chain partners. They are related to a putative daunorubicin resistance efflux protein of Streptomyces peucetius. This model represents a branch of a larger superfamily that also includes NodJ, a part of the NodIJ pair of nodulation-triggering signal efflux proteins. The members of this branch may all act in antibiotic resistance.	2.67927e-13
NZ_CP034550.1\|WP_084716929.1\|3870847_3871912_+\|hypothetical-protein	gnl\|CDD\|378680	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF. This family is a metalloenzyme which is involved in the biosynthesis of antibiotic aureothin by catalyzing the formation of p-nitrobenzoic acid from p-aminobenzoic acid. AurF is a non-heme di-iron monooxygenase which creates nitroarenes via the sequential oxidation of aminoarenes.	1.65598e-22
NZ_CP034550.1\|WP_033434017.1\|3854120_3857291_+\|LuxR-family-transcriptional-regulator	gnl\|CDD\|226418	COG3903, COG3903, Predicted ATPase [General function prediction only].	6.47542e-36
NZ_CP034550.1\|WP_033434014.1\|3862322_3863183_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238861	cd01823, SEST_like, SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.	3.75144e-56
NZ_CP034550.1\|WP_033434065.1\|3859355_3860204_+\|NAD(P)H-binding-protein	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.64601e-62
NZ_CP034550.1\|WP_051766620.1\|3852020_3853124_-\|cysteine-synthase-family-protein	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	5.06049e-73
NZ_CP034550.1\|WP_033434010.1\|3867620_3868445_-\|RNA-polymerase	gnl\|CDD\|371727	pfam11790, Glyco_hydro_cc, Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.	5.02563e-62
NZ_CP034550.1\|WP_033434011.1\|3866859_3867603_-\|thaumatin-family-protein	gnl\|CDD\|366020	pfam00314, Thaumatin, Thaumatin family.	3.06173e-42
NZ_CP034550.1\|WP_153278178.1\|3851152_3851869_+\|hypothetical-protein	gnl\|CDD\|227947	COG5660, COG5660, Predicted integral membrane protein [Function unknown].	4.74808e-27

>NZ_CP034550.1|WP_033434065.1|3859355_3860204_+|NAD(P)H-binding-protein
MILVLGATGKVGRALVPALLDAGARVRALTRDPARARVDPRAEVVAGDLDVPADLPRLVDGVDKVFVLTSGHGRDGVTREAAIAREAARAGVAHLVKLSTTGVHFGQTDPISLAHAESEEAVRQAGPAWTVLRPGTFMDNRLAWRRSVVEFGTVHAPEDDPVSALVHARDIAAVAALVLTTPGHEGATYPLTGDEALTTGQQVEVLAAALGRPLEFVQEPEAAARERMLSFGWPRSAVDGVFDLKRQSAGNEGVVFDTVRTLLGRPALTFADWARENAHLFR
>NZ_CP034550.1|WP_033434066.1|3858054_3859050_-|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein
MTDPAIAVTGLRRSYGNQVVLDGIDLRVPEGTVFSLLGPNGAGKTTVVRILSTLIRADAGEARVCGHDVAREPDRVRAAIGVTGQFAAVDGLLTGEENLLLMADLHHLGRAEGRRRAAELVERFGLGDAARKPAVAYSGGMRRRLDVAMGLVGDPRVIFLDEPTTGLDPRSRREVWQVVRDLAGRGVTVFLTTQYLEEADQLADRIALLDRGVLVAEGSPAELKRRVPGGHVELRFADDRALAAAAAVLRIAPHPGGEPGTPPHPTGGPVPHPTDELVLRVPGANGVRSLKALLDRLDAAAIEVVGLAVRTPDLDDVFFALTGHPAEEVTA
>NZ_CP034550.1|WP_051766628.1|3857266_3858016_-|ABC-transporter-permease
MLRRQLRHMSRNLPTLLMLLAVPVVLLLLFVYVLGGTLGDGLGGSGGRAAYVDYVTPGILLITIANAVQGTAFAVAVDMREGIIARFRTMAIARASVLTGHVLGSLVQVLLQLAAVLGVAVLVGFRPDATAVEWLATTGVLVATAFASVWSAVAMGLASRTVAGAGNLTLLLTLLPFFGSGFVPTDSLPAGLRWFAEHQPFTPIMETLRGLLLGTPIGNGAALALGWCAAIALAGYLCAKRLYERDRAR
>NZ_CP034550.1|WP_033434017.1|3854120_3857291_+|LuxR-family-transcriptional-regulator
MGPDLVLLPGVSFRGREIAGPRLQGLVALLAGDLRTGCGTGRLVDGLWPDGLPDNPPKALQVLVSRARSRLGADVVTRTPTGYRLTLAEDQVDSSAVLLRAEASARCARAGDHAAALSHADAGLALWGGAEPVPGDADGPVAALRARRWTTHRALVRARALALARLDRPAEAVDPLVELAAERPRDEEVLVELLRCEAATVGPAAALARYDEYRRALRDELGTDPGPPVRAEHRRLLRGAPPAVRRGVAHEPNPLLGRDDDIAAVEALLRTSRVTSVVGPGGLGKTRLANAVARRAEGRAVTVVPLAGLGADEDVVREVAAALGVGGNRAPGDVAAIAAALAGPSLLVLDNCEHVVAGVADLVGALVSRTAELRVLTTGRTPLGLSSESVHRLPGLSARVSAELFGQRARAARPGVDLPAAAVAEVCRHLDGLPLAIELAAARVRALSVPEIARRLDDRFALLRGGARDAPPRHRALHAVVDWSWNLLDPTGRAAMRALSVFPDGFTADAARPLLGALPGVDVLAVLEHLADHSLVEVVDTPSGTRLRMLDTIREFSAARLAEEGGADHVTTAFLGWARAFGAANHAALLGPGPDDAAAAVRAEQENLRQALGQALDRDDRPTVAAVAAVLGVAWTVRSNAPRLAELVRQTSRTLVRHRPGPDLVEPTRTALTIAVAHAFASGGPRPVREVAALRRLGPAKPDTVVRAVGRVVGALGDPAELRRLCDHAEPLLAGVAGAFAGYLREGAGDLDGALVVTRRALDLFTGLGSPWPRAFGHGRVAELCLRLGRGAEARDHLLAALPLLGRFGARVDEVGVRAWLVLADLQVGDAAGAQRWLDGLAGVVLDDDEAEAMGYDLAIRGEVRLARGEVEAGLGLWRRAVDQVRGAGDAWAVEARAVAVVAHARHGRLDLVADVADALPGVSAHLVAHLPAEPVPHVAGWATCGALLLAVATADLARGGAGGGGGGGGLVGGGADPARDGADRTRAARMIALAERFPFPRTFHPTMASAPARADAERADRAAYDEAVSSYAALDRAGLRAVALELLGQRARSRS
>NZ_CP034550.1|WP_084716942.1|3853286_3853862_-|AraC-family-transcriptional-regulator
MFDGVEEQDWVAPVEVLSLAGRASGGALTTTMVTTGRPATVTCSYGTRVEVARGWSPHEADVLVVPGGGYADQAGPGVRRLIADQQFLRRLAAADVLHVGICTGVMVLSAAGLTRGRNATTHTAARADLAAQGATVVNARVVDDGDLVTGGGITSGLDVALWLAERFLGARVTQRVETILEYERRGTVWRA
>NZ_CP034550.1|WP_051766620.1|3852020_3853124_-|cysteine-synthase-family-protein
MTLTPTGGDSGPLAPGREVAPPVHDHIADAVKAPALVRLAPNVVLMRFETLKVYAALGAVRHLLETGVVRPGQTLVDSSSGIYALALAMACHRYGLRCHVVASTTVNDTMRAQLEILGATVDRMPPSDDLRLDQNRRVARVRELLARHPDMHWMRQYHDPVHHLGYAEPADLLRRALPGEPLTVVGSVGTGASTGGLTRSLREHDPLTRLVGVQPFGSVTFGSERFTDPDAIIAGIGSAIHFDNVHHELYDRVHWLDFQHAMAATVGLMREHAVFAGLSTGAAHLAARWEAARDPDRTHVVIGADTGHRYTERVFTRWREALDPAALAPVEITSLDELRPPWAAMAWARRPHGPVVPAQQRRKDPVR
>NZ_CP034550.1|WP_153278178.1|3851152_3851869_+|hypothetical-protein
MDCETCREALSARLDGEDGPGPAAEVDAHLGECAACARWQVRAQALTRAIRVRPAAPVPDLVDAVLTTAPPRHVALVPRLGLAAVALAQLWLGLAQLLGGVTGPHAGHDMSSHLFNEGAAWNLALGLGLLVASVSAHRAAGLLPTLGGFVAVLLAFSVHDLLNGAATATRVLSHLPLLIGLALLFLVTRAHRDQPTPGTPAKNEHGGVDDTSDHATPGPSRRRGKERNLRPTAHRRAA
>NZ_CP034550.1|WP_033434019.1|3850387_3851011_-|superoxide-dismutase
MGQYQLPDLPYDYAALEPAITGEILELHHSKHHAAYVKGANDTLERIAEVRDKEDFSGIVGLEKTFAFNLSGHVLHTIFWENLSPDGGDRPEGELAAAIDEHFGSFDAFAKQLSAATSTVQGSGWGVLAWEPLSRRLVVEQVYDHHSNIGMNTSPLLVFDAWEHAYYLQYRNVRPDYVQKLWSLVDWTDVTRRFDLARNGLPTLPAA
>NZ_CP034550.1|WP_051766621.1|3849204_3850443_+|DUF2029-domain-containing-protein
MVPLTPLGTRTLLPVVPVVIGLVGWVVDAPLGIDSAVYRSGGLAVLRGEPLYDGLTTLPPWTPELPFTYPPVAALLFTPLGVLPVQLCWVVFAVLSAVALGAVVELSFPARWLLPAVPVLEPVWRTVALGQVNLVLMGVVLVDLLLLRGSRWSGVLVGVAAAVKLTPLIFIGHLVLTGRWRDAGRAAGTFAALQAVAFAALPADSVRYWTSALVDGNDATGNSWVGNQSLFGAVHRLLPPGPAAPVVSVAAGAVVLACGAVLVARRDDLHAAVLTGLCGALVCPVSWSHHWVWVVPLLGVLLTRASGAAGWAAVLVLCLVFAGWVVVVPTEGRVAPWALWGNAYVWAGLGVLVAHLLRRGGVGVRRGAPDLVRSGAPVAAGGLSERPLPGWWPAVRRRAGWGVRCGRGRSGG
>NZ_CP034550.1|WP_033434020.1|3848787_3849009_-|hypothetical-protein
MEDPGGALTRCTCASSAPVQVQERSGAGRSASGRRGIRTLPKGASWIASRASAYDSRASGVLPDHSGSRRTSR
>NZ_CP034550.1|WP_033434015.1|3860371_3862321_-|hypothetical-protein
MRLLPVVALIALVVVPAPAAAAQPAGCDPLGSGTGECLLPFPNDWHTRPDPATPTGRRLALTPDVLPRNALGSAPNPTPWNRADGFSPGSTLIAHVPGLDPATSGLAPVTDIGRSLDADAPVVLLDAATGERWPHWAELDANDPQRRALLVHPARNLRDGHRYVVALRGLRDAAGGAIVPNPAFARVAGPDLAEDDPLRARQQQLRPALAALAAHGVDPRAAHVAWDFTVASTRSLTGDLFTIRDDALRELGSRAPASTVTGVTDFTPEQDARIAREITGRVTVPSYLTLPGGLPGSVLRRASDGTPRRSLFGPVDAQFRCEVPRSAFAQPSWPALYGHGLLGSRSEVGAGNVKAMAAEHGFTFCATDWIGMAQDDIPVVLAALADITLFAAIPERSQQGILNAIFVGRALAHPQGLVAHQAFRTDDGRPLVDTTRPLVFDGNSQGGILGGALVAASPDVRTAVLGVTGMNYGVLLNRSSDFAPFHQVLDLSYPDRLRQQVVLQLLQLLWDRGETNGYANHLGDRRVLMHIAFGDHQVANVAADVEARTIGARLVTPALAPGRSPDRVPHWGIEPARLPHAGSAMVVWDSGTPAPPTTNTPPTEPEYGRDPHSDPRSSVDARRQKAAFLTTGLVVDVCGGAPCTAPPTG
>NZ_CP034550.1|WP_033434014.1|3862322_3863183_-|SGNH/GDSL-hydrolase-family-protein
MNARLRRALATTTAIALTCLVALPGSPVAAADAPSYVALGDSAASGPLIPTPTGPLACGRSTHNYAHGLAARLGASLTDVTCSGASSRHLTEPQQLSLLDLPAGTAPPQFDALRPDTDLVTLTIGGNDVGLVGIAQDCMRLDPTATPCQGEHEARLAQRLAEFAPELAAALDGIHARSPQARVVTTGYGLYIKPGGCWPVQPVLPSDADFLQGGVDRLNRVIAEQSAAHGAEYVDLRTPSAGHDACQLPGVKWVEGYVPTDLAAPLHPNGLGEANHARIIADHLGA
>NZ_CP034550.1|WP_084716931.1|3863332_3865183_-|hypothetical-protein
MRRALTAVLVAALVSIGWTTPEAADLYMQVVAHEDDDLLFMNPDIDLTISTRTPTVTVFVTAGQITGAGSTDEERARNRQRGIQDAYARMAGVPDVNPGGQEEWAGGLVTVAGRQAERYVLVGRTDVQLVFLNLRDGQLGAVRDGGVTDRTVIPAGGLVTQSYSYDRAAVVTALADLMRAYRPTLVRAQDPLPDARYDVDHSDHVAAARFTDDAVRSYGGQPAQVNYRDYNNTSVPNNLSSSTVARKSSIFDQYLRYDGNTGLRRYLVGMNYRWPRGTAWAGRNADGRPQVFVVRGGVPYAYWQTPSGPWAGPGGLADAGGPLAQALAVASNPDGTMEVFARRQSDHHLLSLRQNAPNGGWSGPWTDLGNPNSALGNADQVGLPAVAANADGRLQVFVKNGGGGVSTKYRTATGWSDWVDLFGTDVQDGLSAVRTPQGRIELFASTRSRLLRWYQQQPNGGFTRDETLPSAVPASPPSAALSQDGRVEVLYRRADTEEVVVTVQTAGGWQAAPVLLGGHGGVGQQAVVTAPPGADARIVVFQRNGGTGVSMTMQRGPNAGYGAWTDLGGVIVDYPAAVLDARGAVVVATVGTDGAVYIRTQAAAGASSPFGAWQRL
>NZ_CP034550.1|WP_033434064.1|3865566_3866820_+|hypothetical-protein
MPLLRHPVLPAVLAVVLTWAGAAASAQPATAALPTAAVALGDSFVSGEGAGAYQPVTDVNGVPQGFPGWSAPNDNAFFCHRSANASLHRADLPGIQARFNLACSGGQPHDIANPSGNRPKGRTVASQLDQLRAVAGTHDIDLVLVGLGSNNGSFTFGDVATLCANRFIADAWTGWWEFWAYLGGPVPQEPCAVSDLATEDEIAAVTAETTAALRQLLTTLDRVDADGRHRVVLQDYTNPLPLDLAAEYHEEDGRTDTRDKFRDLGAERYAAGCPVHRASLAPGHVFSSRLGTVVQGAHAALSAEFPNADLVLLNVQRAFDGARLCEQGGSPANALATPIRLQDGPSGTFVTSLAGKDKIDVQRIANTCVTYFQTCQESWHPSAAGHAVLGRCLTGAAATTARGVACVRSADGTITVG
>NZ_CP034550.1|WP_033434011.1|3866859_3867603_-|thaumatin-family-protein
MRKFLCAVVTAIAALAVTTPVTTAAAADHTVTFVNRSGRTVWIGSTVNADGSRALTGLPTLQNGQSATITIPESAGPNHWRGKFFARQDCTGTPGSTFRCRVADCGPQADRCTTGEQPASLAEFNFDRGDWLAPWYNVSYVNAFSLPITIEARDGVTPPGSTECTAVGCPENLLPYCPPENLTRWPDGRPMLCTNPDRDARTAYSNALSSRCPKAYAWSRHDTEPGNQVVRQCRQCTGFTVTFHPVA
>NZ_CP034550.1|WP_033434010.1|3867620_3868445_-|RNA-polymerase
MRGPRRLLAAALAVLAAVGVLTAPATTVPAAAAATKKGVSVNNHPGVAAALADVRAGWYYTWASDTQGVTTPPGVEFVPMIWGAGAVNDTELNRARSLGTTLLGFNEPDMAGQANMSVEQALALWPRLQATGMRLGAPAVAFGGDRAGGWLDRFMSGAAARGYRVDFIPLHWYGSDFSTAATGHLQSYVQAVYNRYRKPIWLTEYGLIDFTGPQPAYPDQTRQADFVRRSTAMLNGLPYVERFAWFSLSTRTSPTGLYDGTTPNATGVAYRSVT
>NZ_CP034550.1|WP_084716930.1|3868587_3868830_-|SHOCT-domain-containing-protein
MGVADELERLERLRRSGALSEAEFEAAKQRVLNPRSPVPHDSPGRAANRHSAFRIVATTIGVVVILYFLYFLITVLLVMG
>NZ_CP034550.1|WP_033434008.1|3868914_3870750_-|asparagine-synthase-(glutamine-hydrolyzing)
MCGVAGWVSFDRDLTDERPTIEAMTHVMRQRGPDEWGIWTGTHAALGHRRLSIIDLPGGTQPMAVDTPDGQVVLSYSGETYNFVELRDELRRRGHRFRTSSDTEVVLRGYLEWGVAVAERMVGMCAIGLWDGRDERMVLIRDRLGTKPLHYFPTEDGIVFGSEPKAILAHPLVEPVVDTDGIRRLLLGFPTYDEGVWSGVKIVQPGTVITVDRSGLRQHTYWRLTAAPHEDDEETTVHKVREMLEDNVAHELVADVPRGVLLSGGLDSSVLTGLADRTLRPRGEVVRTFSVDFPNQAENFTADSIRLSADGPYIADVVAHVGTDHRHLVLDHRALSDPEVRREVVAAWDAPYGMGDMNSSLFLLFKALKEHVTVALSGEAGDEIFMGHLWHHAEAVRTGDDFPWFVAWPQLNTAAYMSREFIDLIDLPAFSRDSYHLALTEVPHLDGEDDRRRRQREIAYLGLTRFMRTLEDRLDRIAMRAGVETRVPFCDYRLVEYLYNVPWSMHTSDGHEKSLLRAAARDVVPESVAARRKSGYPSTQDLRYVAALQEQVRDVLAAPNGDALFMCDPAKVARAVAADPAEVDPAARFTFERILDVDAWLDIAKPTLKLT
>NZ_CP034550.1|WP_084716929.1|3870847_3871912_+|hypothetical-protein
MCRRAGRGAVSSEVPPRVRRVAGSSVAATANPCRYYDEGNGIPLTPHDYRSRFTEWDRRSWVRAKPHRDSPFTAGAHYFSPELCPLSACPPVRAAPRHVREAVLVHSLYLHLEFTVQLEMGPVNEICALLRSPRFLPWLPAGMKDDVLRIYTDEAGHAEMSNTLKNAVAAETGVVPVEHRPRFLGALAALYSAELPAYRPLVKLFFAIVSETLITGTLTRLPKDPSVQAAVRELAQDHAADEGRHHAFFRALFELLWPRMPVPLRRKVGVLLPRVIHAFLWPDEPALVRVLATMPEHFADPAAVVAGLAASPACRDAVLRNAAPTLRMFRDNGVFDDPVLAAAFADAGLPGRTG
>NZ_CP034550.1|WP_033434007.1|3871908_3872340_+|hypothetical-protein
MIRDLVLALLSAPLADTSAPARFAGGSPPRWRADLTRWLTAAGELDPDLDFDLAPHPAGLVLTTRRPVAATVVLALVTEPAAVPEVEADLLVVLACCPEWTGRCADDVLLLEPRWAAAVLLDHAAPLFWGVSAAERSPSVLDG

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Crispr_ID: NZ_CP034550_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_8

4080819-4080915

Orphan

Consensus_repeat	Method
TGGGCGTGCGCCTGCCGCTGCCCACGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_8

>merge|NZ_CP034550|8|4080819-4080915|CRISPRCasFinder
TGGGCGTGCGCCTGCCGCTGCCCACGCCCCCGCCCTGCCGCGCACCGAGCAGGAGTGGCTGCCCGTGTTGGGCGTGCACCTGCCGCTGCCCACGCCC

>NZ_CP034550|8|8|4080819-4080915|CRISPRCasFinder
TGGGCGTGCGCCTGCCGCTGCCCACGCCC	CCGCCCTGCCGCGCACCGAGCAGGAGTGGCTGCCCGTGT
TGGGCGTGCACCTGCCGCTGCCCACGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033434088.1\|4094071_4094272_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_CP034550.1\|WP_033434087.1\|4092914_4094075_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
NZ_CP034550.1\|WP_033435472.1\|4084515_4085688_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP034550.1\|WP_033435475.1\|4082073_4083093_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381626
NZ_CP034550.1\|WP_033435482.1\|4067051_4068335_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|180120
NZ_CP034550.1\|WP_084717146.1\|4066119_4067052_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
NZ_CP034550.1\|WP_153278191.1\|4071295_4071760_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176870
NZ_CP034550.1\|WP_033435478.1\|4072229_4073123_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP034550.1\|WP_153278921.1\|4075566_4076139_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP034550.1\|WP_153278192.1\|4081343_4082075_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP034550.1\|WP_033435481.1\|4068327_4069719_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|226906
NZ_CP034550.1\|WP_051766975.1\|4078004_4080677_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP034550.1\|WP_033435477.1\|4076119_4077829_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|235708
NZ_CP034550.1\|WP_033434085.1\|4088690_4090505_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_CP034550.1\|WP_033434086.1\|4091700_4092897_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP034550.1\|WP_153278920.1\|4074300_4074933_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP034550.1\|WP_033435473.1\|4083583_4084519_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|132002
NZ_CP034550.1\|WP_033434084.1\|4087286_4088432_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP034550.1\|WP_033435480.1\|4069715_4071299_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223944
NZ_CP034550.1\|WP_033435474.1\|4083155_4083497_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033434088.1\|4094071_4094272_-\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	1.83419e-08
NZ_CP034550.1\|WP_033434087.1\|4092914_4094075_-\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	1.28803e-49
NZ_CP034550.1\|WP_033435472.1\|4084515_4085688_-\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	3.49174e-69
NZ_CP034550.1\|WP_033435475.1\|4082073_4083093_+\|hypothetical-protein	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	0.00534172
NZ_CP034550.1\|WP_033435482.1\|4067051_4068335_+\|sulfate-adenylyltransferase	gnl\|CDD\|180120	PRK05506, PRK05506, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional.	0
NZ_CP034550.1\|WP_084717146.1\|4066119_4067052_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP034550.1\|WP_153278191.1\|4071295_4071760_+\|hypothetical-protein	gnl\|CDD\|176870	cd08861, OtcD1_ARO-CYC_like, N-terminal and C-terminal aromatase/cyclase domains of Streptomyces rimosus OtcD1 and related domains. This family includes the N- and C- terminal aromatase/cyclase (ARO/CYC) domains of Streptomyces rimosus OtcD1 and related domains. It belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. ARO/CYC domains participate in the diversification of aromatic polyketides by promoting polyketide cyclization. They occur in two architectural forms, didomain and monodomain. Didomain aromatase/cyclases (ARO/CYCs), contain two ARO/CYC domains, and are associated with C7-C12 first ring cyclized polyketides. Streptomyces rimosus OtcD1 is a didomain ARO/CYC. The polyketide Oxytetracycline (OTC) is a broad spectrum antibiotic made by Streptomyces rimosus. The gene encoding OtcD1 is part of oxytetracycline (OTC) gene cluster. Disruption of this gene results in the production of novel polyketides having shorter chain lengths (by up to 10 carbons) than OTC. Monodomain ARO/CYCs have a single ARO/CYC domain, and are often associated with C9-C14 first ring cyclizations, these latter domains belong to a different subfamily in the SRPBCC superfamily.	3.48381e-08
NZ_CP034550.1\|WP_033435478.1\|4072229_4073123_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.0957e-29
NZ_CP034550.1\|WP_153278921.1\|4075566_4076139_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	1.83218e-11
NZ_CP034550.1\|WP_153278192.1\|4081343_4082075_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.7041e-08
NZ_CP034550.1\|WP_033435481.1\|4068327_4069719_+\|NAD(P)-binding-protein	gnl\|CDD\|226906	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown].	1.2526e-83
NZ_CP034550.1\|WP_051766975.1\|4078004_4080677_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.9974e-09
NZ_CP034550.1\|WP_033435477.1\|4076119_4077829_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|235708	PRK06131, PRK06131, dihydroxy-acid dehydratase; Validated.	0
NZ_CP034550.1\|WP_033434085.1\|4088690_4090505_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	1.00615e-59
NZ_CP034550.1\|WP_033434086.1\|4091700_4092897_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	6.52969e-79
NZ_CP034550.1\|WP_153278920.1\|4074300_4074933_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	0.000192873
NZ_CP034550.1\|WP_033435473.1\|4083583_4084519_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|132002	TIGR02957, putative_sigma_factor, RNA polymerase sigma-70 factor, TIGR02957 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building and bidirectional best hits, to represent a conserved family. This family is found in a limited number of bacterial lineages. This family includes apparent paralogous expansion in Streptomyces coelicolor A3(2), and multiple copies in Mycobacterium smegmatis MC2, Streptomyces avermitilis MA-4680 and Nocardia farcinica IFM10152.	4.28356e-111
NZ_CP034550.1\|WP_033435480.1\|4069715_4071299_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|223944	COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion].	1.23301e-71
NZ_CP034550.1\|WP_033434084.1\|4087286_4088432_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	4.19863e-60

>NZ_CP034550.1|WP_051766975.1|4078004_4080677_+|tetratricopeptide-repeat-protein
MVEPTQAVHRTIVVVDVEGFGDPRRTLPHQLGTRAGLYRVVADAVRAAGVPWEDCYHEDRGDGVFVLVPPGYAKAPLVEVLPGALVAALRAHNDAGPAAQRVRLRVAVHAGEVAFDGHGTTSTAVTTAFRLLDAPAVRAALADSPGLVVLVVSRWVFDEVVRHSAVLDPATFRPVAVSVKEVRDTAWIALPDHPHPADPAVLDRPAPADGDATAPRQLPAPPVPFVGREEHLADLDRVLTAADDGSAVLISALGGAGGIGKTWLALHWAHRNAHRFPDGQLFVDLRGFSPDGQPLHPAAAVRGFLDAFGVDPGRLPTDLDAQAALYRGLVAGKRVLVVLDNAATADQVVPLLPGTRTCTVLVTGRTTLSSLIDRYGARHLHLDVLTRDEARALLASRLGDRRVEDERAVTDELVELCGRHPLALAITARHAATRPQVPLAEVAAELRELGLDMLDDDDPAASLPAVLSWSRRHLADRQQEVFALLGVAPGPDIDLPAAASLTGLAEAHARRALRGLVDASLLDQHPHGRYAMHDLVRAYAATTAHDLPEPVRRAALARVVDHYLHTAFAAERLLTPHREPVRLDPPSPGAHPHPLPDVPTALSWLDTHHPHLLAAQHTAAAHHRHQAVWQLAWSLSTFHQWRGHRHDVLVVWQAAADAADHLPDPATRPHAHRLLGLAHAELGRHDQALDHLHRALALAEHHHDPGQQAPTHHALAWAWELHGDDRRALGYSRRALDLYRALDQPVWEANALNTVAWLAAHVGEFDTARDHCQDALALHRHHRYLIGEAHTLDTLGYIEHHTGHHRRAVGYYQQATALFRTLGDTASAAVALDYLGHPHAALGHHDRARAAWREALELYRRLGREADAERVQRQLDGLRGTVDDGADRTR
>NZ_CP034550.1|WP_033435477.1|4076119_4077829_-|dihydroxy-acid-dehydratase
MTLRSAEWYAGDGRNAYIHRAWMRRGVPGDAFDRPQIAIANTASDLTPCNAHLTEVAASVRDGIHEAGGIPLELPVVSLGETQVRPTAMLWRNMAAMATEEMLRANPIDGVVLLGGCDKTIPSLLMAAASVDLPAVVVPGGPMLTGTFRGVPLGCGTDVWRLSEEVRAGSLSAEQFTRSESAMIRSRGHCNTMGTASTMALVAEALGTVVPGVAGTPAPDSRLLEAAHRTGRLTVELVTADRRPSTFLTRASFHNAIVALAAIGGSTNAVVHLLAIAGRLGIDLTLDDFDRIGSDVPVLVDLLPAGRFLMDDLHRAGGLPAVLREVRDLLDPDALTVTGRPLVSYLDDAPTWDPEVIRPRAAPLVERGGIAVLRGNLAPRGALVKPAAASPHLLRHRGRAVVFDSVEDFHARVDDPDLDVDADSVLVLRGCGPRGYPGMPEVANMPLPKKLLEQGVRDMVRVCDGRMSGTAYGTVVLHVAPEAAAGGPLALVRTGDVISLDVEARRIDVEVPDEELAARTPNDATVAGFATPRRGWERLYVDHVLQADTGADLDFLLGSSGSRVSRESH
>NZ_CP034550.1|WP_153278921.1|4075566_4076139_+|VanZ-family-protein
MAGRWHGCLDTENGVLLMTLVTLPPAFLVACALALRRRAAGVAFAWRRSLAEVGMVHGTVPFVWMTLMPGPGAGTVPGRVSLVPLRDLVTMGPLGIGGNLLVFAALGFFAPVRFAALASVTRVLALGAGCSVLVETAQYALQLDRVSSVDDVLVNAAGAVLAGLASRRWWHPGGPTPPRDRAGGFSATRG
>NZ_CP034550.1|WP_153278920.1|4074300_4074933_+|TetR-family-transcriptional-regulator
MSKELIVAVATELLDAGGEAALTFRALTARLSTGYGAIYHHVANKSDLLAAATDDVIAAVVTGVVVDAEPREALRALALGLFDAIDAHPWVGAQLAREPWRPALLEVYEGIGGLLDALGVPERALLDAAGALVNYVLGVAGQNAANARALAGGEEDRADFLAGVAARWSRLDPDRYPFAHKAAARLREHDDREQFLAGVDIFLAGIAALR
>NZ_CP034550.1|WP_033435478.1|4072229_4073123_+|alpha/beta-hydrolase
MTRSHEPVTVSHRTVDVDGIEIFYREAGPEDAPVLLLPHGYPSSSFQFRNLMPALGDRWRCVAPDYPGFGYSATPAPDRFSYTFTGYADFLRRFTEVLGLTRYAIYLHDYGTQFGLKLAMHAPDRVTALIIQNGDVYEDQHGPKYKPLKDYWSNPTDEGRAELATAVTEEGFRDEFVGEIPEHLVDRVSPDLWRLSWSLMDRPDRRENLVNLIADQARTLDWFADEQAYLREHQPPTLIVWGPHDGYMPEGAARAYLRDLPDAELHLIEGGHWALETNLDEIVPLVRDFLDRTLPTP
>NZ_CP034550.1|WP_153278191.1|4071295_4071760_+|hypothetical-protein
MTEHSVVLTASVPADEVFALLRRQERFPDVSADIESVAAEGEDRYRYALRFRGGVAHWVQRVEVEGRVLRFEQVEGDFVALGGAWEVVPVEGGSEVTYRVSFRTSVPHLAGAIDPMIARVLLRAAVAVVTGLAGPARVVEGAAALHDEISVVGS
>NZ_CP034550.1|WP_033435480.1|4069715_4071299_+|aldehyde-dehydrogenase-family-protein
MTTREPVMYPAYIGGKDVEHPEGKYVHTVAARAVLEDTFPALALKRDLDAGLVDARSAGPAVVGGCALADDDMARYALESAARAAPEWARVPLQDRIAVGVRIGERLRERRDDIVELLVAEGQPRDLAGPTLDEYWYADYSLETLHWCAGQMAWTRDRGAGRAVVRRVPDGVVCVNPPQNASTPNALFGVSALLAGNAVVVRAPRGVPLATTYALREVVVPVLEEAGAPAGVLNILCGPPMTDLWLESPHVNDIVYVGGSAKGLEFERAAVAAGKKPVLELAGNDCVVVWKDADLDGAVRAIAENFRQSGQICNIPNHVVAHPEIADELLDRLVGEAAATRPGYPDEPGVVLTPVLMARAHFANVADAVSRGAKLLHGGRRLEVDGTPSDTGLFVEPTVLRVDGLRVADGTPAVREETFSPLVPVVVPEPDDDEAVFDEVLRFVGGNAYGLRNSFWVRDERLVNRIAAEVTHGGVVNVNDSHSAFRPFLPTHGGTGLTGGAFGEANYLMLRTTRLQGVNIVRGGAWR
>NZ_CP034550.1|WP_033435481.1|4068327_4069719_+|NAD(P)-binding-protein
MTEPGGLRVAVVGAGASGTLAAVHLLRAAADRGRPLRLVLVDRSGEFGPGRAYRTDDPAHLLNTPAARMSALADDPDHFVRWNRELGRDVDGGAFLPRGEYGRYLGEALLAEERRARGVAVVERVAATVTGLSDDGSGGGGLVVELAGRAPVRVDFAVLAPGVGGGDPFAGLLPTGSPRYVADPWDGPVAITDDSPVLVLGTGLSMMDLAISVTRAHPAAVVHAVSRHGLLPRPHRTGRAPVAPPPGPGLPEHVGSLRDLLGFARRGVAADPDRWRDFVDRLRPHAPRLWQQLDLTDRRRFLDRVNRYWDVHRHRAAPATHRRVRALMGTGRLHVHRGRVACLRPVADGFEADLVTPAGPRSLRVGWVVNATGFRGDVTDRPDPLLRRLLDDGTARPDPLGLGLTTGRDGRVLDRRGAPRPVFVLGALRRGELFESTAVPEIRAQAQAVAATAMAVPGREVTT
>NZ_CP034550.1|WP_033435482.1|4067051_4068335_+|sulfate-adenylyltransferase
MTTDLLRLVTAGSVDDGKSTLVGRLLYDTKSVLSDQLDAVLRSSAERGLDNPDLSLLVDGLRAEREQGITIDVAYRYFATARRTFVLADTPGHVQYLRNTVTGASTADHAVLLTDARKGVLPQTRRHLAVMAMLGVPGITLAVNKLDLVDFDRGTFESTRDEFVAHAVSLGYREEQVTAIPLSALAGDNVVTESEHTPWYDGPTLLEHLETVVPDPRGSDVGFRMPVQYVLRDGTTDYRAYAGQVVAGEVAPGDHVVVLPDGTTTTVVEVGTPDGPVDRAHEGEPVTLVLADEIDITRGDLIAAADRRPRVAEEFDATVCWLAEEPLRPGARVLLRHGTHTTDCRVTGLSTRFDEQELAVLDGPEELALNEIGKVRLHVADPLPVDDYRDCIATGAFLLIEPGDGNTLAAGLLGDSLSVMAHGARDD
>NZ_CP034550.1|WP_084717146.1|4066119_4067052_+|sulfate-adenylyltransferase-subunit-2
MSAPTKQRPTTDERAATGVATLEAEGIHILREVAGEFDRPALLFSGGKDSTVLVHLAVRAFAPLPPPFTLVHVDTGHNFPEVLRFRDELVERYNLKLHVAEVQDWIDRGKVQERPDGLRNPLQTVPLLDTITEQRYDAVIGGGRRDEERSRAKERVFSVRDAFGRWDPRRQRVELWNLYNGMHKPGEHVRVFPISNWTELDVWRYVAERDIELPSLYFAHQREVYQRDGMWLTPGQWGGPDDDGELVEKTVRYRTVGDGSCTGAVESDAATVEDIIEEIKASRLTERGASRADDRISEAAMEDRKREGYF
>NZ_CP034550.1|WP_153278192.1|4081343_4082075_-|TetR-family-transcriptional-regulator
MGLVPSGREVRAPTLGRKVRARKFARTHFCWHTPGVTTRRAGLREQKKQATREALREAALRLALARGPANVRVDDIAEAAGVSPRTYNNYFSSREQAIVAAVTAEREARIAAAVVARPAGDRLSRAVVEAVVEQYTDPGEHHRDALLLITTHTELREAFIATTGALEHPLADAITRRVNGIDPHTALVLAASVAAAIRVALQGWVRPGTAPGGLVVPSGSLPDLLRTALAPLAPALDAAGQRP
>NZ_CP034550.1|WP_033435475.1|4082073_4083093_+|hypothetical-protein
MRAKGIAYDTGFVHNGETSREVFDPDLVRRELAVIRDDLHCNAVHLVGGDPERLELAARRAAELGLEVWFSPYPLNLTATEMLALFDDCARRAERVRRDGAEVVFVTGVELTLMARGFVPGDDIAERLDWMLGRPDGLGERITEVSARLGDFLEDAVRTVREHFRGKITYACIPFERVDWALFDIMSVELIRSAEVADRFQEGVRTLVAQGKPVAITGFGTATWRGSGDRAPRSMEIVERDETGRPVRLNGDYDRDEDGQAKYLRELLEIFDAEGVDSAFVYLFALHNYPHRPNDPRHDLDLASIGIVKVLEGRNGDTYPDMPWEPKAAFTALADHYRG
>NZ_CP034550.1|WP_033435474.1|4083155_4083497_-|hypothetical-protein
MRHPTRRFATAAAVAAVLTGATTLAAPAASAVTPGAGFQYWSLNCQTWETAGGDGTLACTGTQAGTWRAKVKCSFGFTYYGNWQHNNSGGTWYSTADSNCYWGVSDISLTTST
>NZ_CP034550.1|WP_033435473.1|4083583_4084519_-|RNA-polymerase-sigma-70-factor
MSAADPAEQVFHQHRNLLFSVAYRVLGTAADAEDAVQDAWLKWSAADRSRVADPKAYLTRIVSNQALERLRSARYRRETYVGPWLPEPVLTDEHPAADAESVSMAVLVVLEALSPLERAVFVLKEVFGFSHAEIAEAVERSEVAVRQAAHRAREHVRARRPRFTADRARRQEVTERFLAAATGGDINALMELLSPDVALWTDGGGKVRQALRPVVGASAVASWFAAIGTVSYQGVEPADMNAELVEVNGGPGVVFRGPDRVIATVTFDFDADGRVTAIHNVANPDKLRAVAGGTAHDLRPPRWSGAPQGIA
>NZ_CP034550.1|WP_033435472.1|4084515_4085688_-|pyridine-nucleotide-disulfide-oxidoreductase
MSAHHVVVLGAGYAGMAAAVQLAARVRRREDVRVTLVNAQERFTERLRLPMAATGQELSELDIPKLLEGTGARFVRGWVTAVDAGAKAVRVDDDLVLHYDTLVYALGGVTDTASVPGVEDHAHTLDSTRDAEVLADRLARSGGGAVVVVGSGLTGVESAAEIAERHPGLDVVLLGRREPGSELNPRARAYLRAALDRLGVRVRAGVEVVGVRPGAVDLADGEGVAADVVLWTGGTRVSPLAAAAGFTTDERGRIVTDAALRSVSHPEVFAVGDAAAIRQGYGVVHGTCQSGMPTGVHAALSILRALRGRQPKPFRFGYYHTPVSLGRNDAVVQFTHPDDSPRRIHLTGRAAVRYKEVVTASPWPTYGRMKKMPASGAFWPRGGRVTRVAR
>NZ_CP034550.1|WP_033434084.1|4087286_4088432_-|serine-hydrolase
MIPMKPTAITALVTSLCLALLSPAPPAQASPGYTRAELQRDVDALRQRGVIGIQARVTSGRRTWTATSGLADVTTGRPVPAEGHYRVASYTKTFVATVVLQLVGEGRLGLDDAVEQHLPGLLPDRGITVRHLLQHTSGLPEYRAALPGRDRAGFEEHRFDHYEPRQLVALALARPPTSRPGEAWSYSNTGYVVAGLVIQAVTGHPWAHEVRQRIIRPLGLTGTSVPGDDPRLPEPHARAYQQWTLGGELSDTTEFNPSSSDAAGQVISTTRDLDRFFRALMSGRLLRPAELAEMLRTRPADDGLEYGLGLYRKPLTCGGYYWDHGGNTTGTISRGGVSPDGEHGIALAYTGAHGNSLEDIAALAAASDRIVDRLFCEQRRD
>NZ_CP034550.1|WP_033434085.1|4088690_4090505_+|NAD(P)/FAD-dependent-oxidoreductase
MSTTQSSPRVPADPGFDLDALRARYRAERDRRVRPDGSAQYRRAEGEFGYYAEDPHVEPGFTREPLRDRVEVVVVGGGFGGLITAARLRQAGVGGIRVIDKAGDFGGTWYWNRYPGIHCDIESYIYLPLLEEVGYVPKWKYAPGEEIRQHARAIGRHFDLYRDACFQTQVTDLRWDEDTTEWVVRTDRDDRIRARYVVISNGTLDHPKLPGIPGIEDFRGHTFHTSRWDYGYTGGDANGDLTGLADKRVALVGTGATGVQVVPHLGRDARHLFVFQRTPSTVDVRGNRPTDPAWAASLTPGWQRRRMENFLTVVTGGQAEDAVADGWTGSARLLGKLIPTDAYGDLPPEERERVDEIVDAQKMNELRARVDAVVEDPATAELLKPWYRYMCKRPTFSDHYLETFNRPNVTLVDTADHGGVERVTGNAVVVGDREYEVDCVVFATGFEVGMSGVMTGRVPVRGRGGLPLLAHWRNGPRTLHGFYSHGFPNLFHLGPLQNAPSVNFVHVLEEQAGHIAAVVAEARARGARYVEPGEAAEGAWVATIRATAPDQYGFFAECTPGYYNDEGRPRERGESFGDGPVAFHRLLRRWRAEGGMDDVLVGAR
>NZ_CP034550.1|WP_033434086.1|4091700_4092897_-|cytochrome-P450
MTSTPEVPEYPMPRAAGCPFDPPPQLRELQRRTPLTRVRLWDGSTPWLVTRYADQRAVLTDRRVSADMTHPAYPRSAPGGGSLSFIGVDDPEHARLRRMVGSAFTVKNVAAMRPAVQAVVDDALDAMLAGPNPTDLVGAFALPVPSLVICDLLDVPYADHDFFQANSKAVINRDSTPEERAAASRRLAEYLGGLVAAKVGRPGDDLLSRLGARIEAGELSHREATEMAVLLLIAGHETTANMIALSTLLLLRDPDQLALLRDSDDPAVAGRAVEEMLRYLTITHNGRRRVALEDLEVAGCPVKAGEGLVLPNDVANRDPDAFPDPDRLDITREARHHVAFGFGVHQCLGQPLARLELEIVYRTLYRRVPTLRLAADFADVPFKHDGFVYGVHELPVAW
>NZ_CP034550.1|WP_033434087.1|4092914_4094075_-|pyridine-nucleotide-disulfide-oxidoreductase
MTSHVLVVGAAAAGLSTAEALRRKGYTGGLTLLGDEPHHPYDRPPLSKQVLSGAWEPERARLRDDGVLAALDARFVLGDPAVALDVANRAVTTASGLTLRADAVVLATGVRPRTLPDQAGLAGVHVLRTLDDALALRADLRPPARLVVVGDGVLGAEVAATARGLGVETALAGPQAAPLAAQLGPLASGLLADLHAGHGVRLRLGSAVLGLTSRDGRVTGVRLDAGDVLPADVVVVALGSIPNTDWLAGSGLELDNGVVCDARCRAAEGVYAVGDVARWHHEDLGVALRLENRTNATEQAGAVADNILGTDRAYVPVPYFWTDQFDARLQVHGVPSGADVSVVDGDVEARRFVARYERDGRVVGVLGWNMPKQTRQHRARLLAPIR
>NZ_CP034550.1|WP_033434088.1|4094071_4094272_-|ferredoxin
MKVSVDEDRCCGAGSCVLAAPDVFDQRDEDGVVVLLAPEPAGHLHGAVREAADVCPAAAITLSGTA

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Crispr_ID: NZ_CP034550_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_9

4155139-4155300

Orphan

Consensus_repeat	Method
CGCTGCCACGGGCGCTGT	CRT

3 spacers

The CRISPR arrays of NZ_CP034550_9

>merge|NZ_CP034550|9|4155139-4155300|CRT
CGCTGCCACGGGCGCTGTCGTGGGCGCTGCCACGGGTGCTGCCACGGGCGCTGCCACGGGCGCTGTCGTGGGCGCTGTCGTGGGCGCTGCCACGGGCGCTGCCACGGGCGCTGTCGTGGGCGCCCCCACGGGTGCTGTCGTGGGCGCTGCCAGGGCCGCTGT

>NZ_CP034550|9|3|4155139-4155300|CRT
CGCTGCCACGGGCGCTGT	CGTGGGCGCTGCCACGGGTGCTGCCACGGG
CGCTGCCACGGGCGCTGT	CGTGGGCGCTGTCGTGGG
CGCTGCCACGGGCGCTGC	CACGGGCGCTGTCGTGGGCGCCCCCACGGGTGCTGTCGTGGG
CGCTGCCAGGGCCGCTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033434128.1\|4163855_4165868_+\|beta-galactosidase	unknown	unknown	gnl\|CDD\|367090
NZ_CP034550.1\|WP_033434117.1\|4144681_4145650_-\|ornithine-cyclodeaminase-family-protein	unknown	unknown	gnl\|CDD\|225280
NZ_CP034550.1\|WP_033434126.1\|4161489_4162401_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP034550.1\|WP_033434122.1\|4156349_4156925_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378461
NZ_CP034550.1\|WP_084716950.1\|4151070_4151970_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP034550.1\|WP_051766644.1\|4148696_4149038_-\|Dabb-family-protein	unknown	unknown	gnl\|CDD\|369566
NZ_CP034550.1\|WP_033434125.1\|4160656_4161493_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP034550.1\|WP_033434123.1\|4158587_4159457_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP034550.1\|WP_084716957.1\|4149034_4150006_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270352
NZ_CP034550.1\|WP_153278922.1\|4145660_4145996_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270350
NZ_CP034550.1\|WP_084716958.1\|4153704_4154391_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224837
NZ_CP034550.1\|WP_033434127.1\|4162397_4163684_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP034550.1\|WP_153278199.1\|4151956_4152607_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226931
NZ_CP034550.1\|WP_033434129.1\|4165969_4166710_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP034550.1\|WP_033434121.1\|4156097_4156286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766664.1\|4157300_4158344_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380478
NZ_CP034550.1\|WP_033434118.1\|4146279_4147263_-\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_CP034550.1\|WP_033434189.1\|4150190_4151072_-\|phenylalanine-4-monooxygenase	unknown	unknown	gnl\|CDD\|238215
NZ_CP034550.1\|WP_033434119.1\|4147264_4148677_-\|phenylacetate--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|224458
NZ_CP034550.1\|WP_033434124.1\|4159629_4160649_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033434128.1\|4163855_4165868_+\|beta-galactosidase	gnl\|CDD\|367090	pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.	0
NZ_CP034550.1\|WP_033434117.1\|4144681_4145650_-\|ornithine-cyclodeaminase-family-protein	gnl\|CDD\|225280	COG2423, COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism].	6.45829e-97
NZ_CP034550.1\|WP_033434126.1\|4161489_4162401_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.01951e-53
NZ_CP034550.1\|WP_084716950.1\|4151070_4151970_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	6.22573e-48
NZ_CP034550.1\|WP_033434122.1\|4156349_4156925_-\|hypothetical-protein	gnl\|CDD\|378461	pfam10634, Iron_transport, Fe2+ transport protein. This is a bacterial family of periplasmic proteins that are thought to function in high-affinity Fe2+ transport.	4.80951e-10
NZ_CP034550.1\|WP_051766644.1\|4148696_4149038_-\|Dabb-family-protein	gnl\|CDD\|369566	pfam07876, Dabb, Stress responsive A/B Barrel Domain. The function of this family is unknown, but it is upregulated in response to salt stress in Populus balsamifera. It is also found at the C-terminus of an fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus. Arthrobacter nicotinovorans ORF106 is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an a/b barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.	9.17879e-19
NZ_CP034550.1\|WP_033434125.1\|4160656_4161493_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.27866e-63
NZ_CP034550.1\|WP_033434123.1\|4158587_4159457_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	9.85111e-31
NZ_CP034550.1\|WP_084716957.1\|4149034_4150006_-\|hypothetical-protein	gnl\|CDD\|270352	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold. This group includes the SCO4506 protein from Streptomyces coelicolor and related hypothetical proteins. SCO4506 is an ortholog of Ttha1568 (MqnD) from Thermus thermophilies HB8. MqnD is an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. SCO4506 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.69859e-84
NZ_CP034550.1\|WP_153278922.1\|4145660_4145996_-\|hypothetical-protein	gnl\|CDD\|270350	cd13632, PBP2_Aa-PDT_like, Catalytic domain of prephenate dehydratase from Arthrobacter aurescens and similar proteins, subgroup 3; the type 2 periplasmic binding protein fold. Prephenate dehydratase (PDT, EC:4.2.1.51) converts prephenate to phenylpyruvate through dehydration and decarboxylation reactions. PDT plays a key role in the biosynthesis of L-Phe in organisms that utilize the shikimate pathway. PDT is allosterically regulated by L-Phe and other amino acids. The catalytic PDT domain consists of two similar subdomains with a cleft in between, which hosts the highly conserved active site. In gram-postive bacteria and archaea, PDT is a monofunctional enzyme, consisting of a catalytic domain (PDT domain) and a regulatory domain (ACT) (aspartokinase, chorismate mustase domain). In gram-negative bacteria, PDT exists as fusion protein with chorismate mutase (CM), forming a bifunctional enzyme, P-protein (PheA). The CM in the P-protein catalyzes the pericycle isomerization of chorismate to prephenate that serves as a substrate for PDT. The CM and PDT are essentail enzymes for the biosynthesis of aromatic amino acids in microorganisms but are not found in humans. Thus, both CM and PDT can potentially serve as drug targets against microbial pathogens. The PDT domain has the same structural fold as the type 2 periplasmic binding proteins (PBP2), many of which are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.82701e-05
NZ_CP034550.1\|WP_084716958.1\|4153704_4154391_-\|hypothetical-protein	gnl\|CDD\|224837	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only].	5.23407e-70
NZ_CP034550.1\|WP_033434127.1\|4162397_4163684_-\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.40326e-56
NZ_CP034550.1\|WP_153278199.1\|4151956_4152607_-\|hypothetical-protein	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	2.38657e-18
NZ_CP034550.1\|WP_033434129.1\|4165969_4166710_+\|hypothetical-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.15039e-09
NZ_CP034550.1\|WP_051766664.1\|4157300_4158344_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380478	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. Periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this family function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea. The sugar binding domain is also homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR. Moreover, this periplasmic binding domain, also known as Venus flytrap domain, undergoes transition from an open to a closed conformational state upon the binding of ligands such as lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. This family also includes the periplasmic binding domain of autoinducer-2 (AI-2) receptors such as LsrB and LuxP which are highly homologous to periplasmic pentose/hexose sugar-binding proteins.	3.90707e-21
NZ_CP034550.1\|WP_033434118.1\|4146279_4147263_-\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	1.71253e-115
NZ_CP034550.1\|WP_033434189.1\|4150190_4151072_-\|phenylalanine-4-monooxygenase	gnl\|CDD\|238215	cd00361, arom_aa_hydroxylase, Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH). PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers.	2.87095e-75
NZ_CP034550.1\|WP_033434119.1\|4147264_4148677_-\|phenylacetate--CoA-ligase-family-protein	gnl\|CDD\|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	1.66595e-59
NZ_CP034550.1\|WP_033434124.1\|4159629_4160649_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.05153e-94

>NZ_CP034550.1|WP_084716958.1|4153704_4154391_-|hypothetical-protein
MLSTGNRPPTTTDAHPPPVDRLHPATGTPRPTGTTALHTTGTNRPLVLALPRGGVPVAAEVAAAIGADLDVTVARKIGAPSRPEFGIGALAEDGRPVFNQHALTRLNLAEADLAYAVERERAEIRRRIRRYRPDRPPPDPTDRLVVLVDDGLATGITARAALRWLRERHPRRLLLAVPVCAPGATRDLADADAVACLHSPADFRAVGHWYANFDQLSDDDVNRALHRP
>NZ_CP034550.1|WP_153278199.1|4151956_4152607_-|hypothetical-protein
MPVLWTVQSLGELEIAGVVRADAGVPDVVQALRPDIALVCCDPGNEEQVLGALRRMREHGRHQCDALLVVTRPRPDVVLTIARLGVFSCLVAPVDPGTLRELLGVWLGRWRLAGRKEPDAPLDQEEVNLLVHGPGPTGDRRPPATSTLGLVAMVLHDSTAPLSATEVGRRCNLSSVASRRYLKQLVDRGSAVMTVQYGKTGRPRHLYGWASRLMPG
>NZ_CP034550.1|WP_084716950.1|4151070_4151970_+|LysE-family-translocator
MCSTGFPLGGARVRVNHLNRVPGIQRPGQRMTGPISRQRHPAVVTGVDHRGHRGGPLGKVSKVWKLSDVPRSGTGAHFAARLSPCCYRRGMFATLIAFAGVSLLATLIPGPDTAVVIKNSLGRGRRSAIATAGGCSTGQVGWGLASIAGIAALLATSVVAFSIMKWVGALYLCYIGIRSLISAVRSGGAAEAAGPRAAAPGGAAASYRDGLLTNALNPKTALFMSALLPQFTGPGDPAWLPFALVAVTAVVSFACMAAYALVFAKIGDVLRRPVVRRTVDGAMGGVLVSFGVGLAFSQA
>NZ_CP034550.1|WP_033434189.1|4150190_4151072_-|phenylalanine-4-monooxygenase
MDDVALYAPMTYDESGYPRYAFPANHPAHGDEDYTERRNRIAHLGAQHVYGTPAPEIDYHERDHETWRVIQRSLAERHDEYAATDVVKWAAELALPADRVPQLNEVTERLTAMTGFGLQPAVGFVPIEEFYGVQADRRFYAAQFIRHHSQPLFSPEADVVHELVGHAPALGNPKVAELYRLTGEAVRRVAEPRTIELISRIFWFTLEYGVIEEGGQFRAYGAGLLSSFGELERFREADIRPLDLKGMATTEYDITDYQHVLFAGRSIDHVHEFFSEFLRTVDDEDPDRIGVSF
>NZ_CP034550.1|WP_084716957.1|4149034_4150006_-|hypothetical-protein
MAREREIFRRYRSAFGSAGAVLSSTVLEICRGRLGAERERPEVEAESATRPLRLGVFSFANCAAVRWGLAATGSPEPVTGTPEAVAAALLAGEVDVAPISLVEYLRHHRELLALPGLAIGSDGPVMSCQLFTRGPLAGLAGGRVALGSSSRTAALLAKVLLTEWVGVEAEYRVEPPVLADMLRQAGGAVLIGDAALAETLHPRPGLRVHDLGALWREWTGLPMVFAVWAVRRTTAARRPDDVRAAHATLLDAAGRGGRHLAEVAGSPAGDGLFDRDELARYLGVLDHSLGERQVAGIRHFAKLAARHGDVAEDADITFFGGDA
>NZ_CP034550.1|WP_051766644.1|4148696_4149038_-|Dabb-family-protein
MIRHIVLFKFKPGVSWDDDAVLAAEAVARRVGDEVPDLAHWYAGRNVSDRPVAYDFVVIGLLADEDALGRYMTHPFHQDAIARWREISDWVVADVVEQDATVVTNDVPVPAAS
>NZ_CP034550.1|WP_033434119.1|4147264_4148677_-|phenylacetate--CoA-ligase-family-protein
MFTIFNEELAEVARRFRDDHREFAAGGWGADRLEAHRVANLRSAVEYTRANSPFYRRHLAHVDPAAITSSTGAAWTSVPFTTKDDLRSARYDILSRPLSKAWIFYETTGTTGASTPCPRDNVDSLANNTVLTVHYDTIFRHHGDDQVIGVSGPTELHAFGDTFGDVCRNLGLAVAKMWPHSPMVGFDRAVAVLRELGVTGLFCTPGMALTLAKRVRAAGLDPRRDLRVRVLMLTGELASPELLANIGELWGARAYNALYASQEASVLGAAGEDGGLYTAPLINFYEVVDPTTGDPVAPAGGVRTGELVVTALYRGAKPLVRYRTGDLVRLTPGDAAASLPADRLEVLGRTRDELVVGGRRISGYDLENLLLGHVRGYLDYQVVIDTGADGADRLVLKLEAADDEPPRVDPAIRDHCRDVLGVEVGVDHDRFGSITSTGAMVSWKAARVVDNRSEVDAETAAARALASARS
>NZ_CP034550.1|WP_033434118.1|4146279_4147263_-|branched-chain-amino-acid-transaminase
MTAGVSSPRRATGRPATAAWAYHLDGFVPVAEATLPVTTQGLHYGTGVFEGIRAHVVPGRAELAVFRLHDHLARFERSCRLLRIDLPHGVDELASIVVELLSRNGSAQDTYIRPLAYKYRLLPGTPPGVSLRGNSDGLSVIAFALGDYSPAGGVRCAFSSWTRPPARSVPVRAKATGAYLNNALAVDEARAAGYDDAILLNERGSVAEASTANVFAVRGDEVLTPPPGADILEGITRDTARELAVDLGLAPVERDLQPADLLLADEVFLTGTGLGITPVVELAGRAIGRGEPGPVTTELRRRYQDLVRGGDERREHWLTRVPVPPNA
>NZ_CP034550.1|WP_153278922.1|4145660_4145996_-|hypothetical-protein
MDTRLALAGAFIRDTPMYGIARRRGAAVPPRPRIASHPAPLPLVAQLLPDRFTAHETVKVTSTSAAAIAVRDGEVDLALTTQPSAAAYDLEFISRTRTIRMLWSVFTAAPA
>NZ_CP034550.1|WP_033434117.1|4144681_4145650_-|ornithine-cyclodeaminase-family-protein
MLFLDEHEVHRLYPVEAAIDVMAEAMRRYSAGQVTQPLRTILRPPTETGLLGTMPCHVAGGGDAGFGLKAMVLKPENPARGLDLHIGVVMVFDPDTGRPLAVMDAGAITATRTAAVSAVATDALAPVDAGDLAVLGSGVQGRSHLRAMAVVRKLRRVRVWSRTPEHAADYRAWAARELDVDVEVAPDVRSALAGADLVCTTTASKEPIVEPGWVARGAHLNVVGGSFADARELASRVVAEAAVFVDSRESAAAESGDLRAPLAEGLIGPDHVRAELGEVLLGRHPGRGSADETTLYKSLGLAVQDTMSGFYVARAALEERTA
>NZ_CP034550.1|WP_033434121.1|4156097_4156286_-|hypothetical-protein
MKNRFSRRFLVAVVATALTGVLGGLAPLYGGATGMVLAVALSLCGVPLVVLACRWQADVPTR
>NZ_CP034550.1|WP_033434122.1|4156349_4156925_-|hypothetical-protein
MSTPGTTPPMAASNEADPGQLDVARAEGAAYRRALEAMREESGAVVKQAGEFLVALVQEDAEGMYARRDGRLVWQEAPEDANGHLEIAVADAADGRFVPELDVTVTVTRDGEDVLDTRLPFLWHPFLHHYGANFTMPGAGDYDVQVHIEPPGFMRHDPVNGKRYEHPVEVAFLTVPFTPGRKPSPEARPRD
>NZ_CP034550.1|WP_051766664.1|4157300_4158344_+|substrate-binding-domain-containing-protein
MVVLGGGVLVTGALVLLRAGVLTRAVPAWTAVVAVALGAAPALLLRRSRRGRRTRQVFLITSAFRQKYWVADFLQRLHGVLDRSGVDLVLKVPARDYDAAAQAHHLRRVLASADRYAGGFVVATEVHRMQADLVEFCAELGLPVVFTDIEPFDDVDRYPDNAAFVGYLSHEIGALAGRWLVSRLQRWGVARPHVLVVASREHADRQARCAEVVRETWPDARLVIQDDCAFSRSRAYDAVLAEVRRVAARGDRLDAVFCTNDEMALGAVDALRVANSPATGEAVVIGVDGVLEARALIDAGTSPLRATVVQDSHRLAESAAHVLERMCKGRAVARRTVLEPEVHEAGA
>NZ_CP034550.1|WP_033434123.1|4158587_4159457_+|LacI-family-transcriptional-regulator
MVTIAEVARHAGLAVSTVSYALSGKRSVSPATRRRVEESARQLGYRSRRPDGLVLGVVVPPDLDAAGRWLEAFVAAAAARARRADATLVVTSPGAATSGCHGLVVLAPAPVPVLLDVPVVRVGPADDPDQVRVDVDRAAAGELCAEHLADLGHRAVAFVHRDPLAEFFCGLARGCDARGLEVRPHRWPARDLLGDTARPTAYVAADGAVLGDVLATLRAGHVRVPGDASVVALCPDEVAAPEGVTSISVWPAELGEAAVEAVLDDRAGRLLRPHLTVRGAARHDLVTRP
>NZ_CP034550.1|WP_033434124.1|4159629_4160649_-|LacI-family-transcriptional-regulator
MTVDHGKARRRATIHDVAAAAGVSRGTVSRALNGGHNVSPSALEAVRRAVRTTGYVANSAARSLVTQRALSVAFVLTEPQQRLFEDPNFSVLLQGCTQALAEHDVPLLLMTAGNEVERERTRRFIAAGHVGGVLLVSSHTGNPLLEDLRHTGIPVVACGKPIGHEGRVAYAAADDRSGARRLVEHLRERGRRRIATIAGPPDTPGGVERLAGYRDVLGAGATASLVEHGDYSRAGGEAAMARLLEREPGLDAVFVASDLMAAGALDVLRDSGRRVPEDVAVGGFDDSVTARSTRPALTTVRQPFERITREMVRLLLELTSGQPPAAAILPTELVVRDST
>NZ_CP034550.1|WP_033434125.1|4160656_4161493_-|carbohydrate-ABC-transporter-permease
MTARRRPLLPTLVLLLGALYCLFPVAWVVVAATKGSGELFATPTFEPGSSLLGNLGDLFGYREGLFWTWVANSAVYAGVGALLSAAVSGVTGYALAKYSFRGRDLFFNALIAGVLVPAVVLAIPQYLLLSEVGLTDSYLSVLLPSVISPYGIYLARIHAAASVPDDVVEAARTDGAGETRILTSIALPMMLPGLVTVFLFQFVSIWNNFLLPFIMLGDDRKFPVTLGLYTLLNQGNTTPALYTLVVAGALVSVLPLIGLFLLLQRYWRVDLLSGSVKA
>NZ_CP034550.1|WP_033434126.1|4161489_4162401_-|sugar-ABC-transporter-permease
MRTRSRPTTAGAAPYAFAAPAVVLFALTFLLPIGYALYLSLFRVEVSGLGLGRGSRREVFAGPGNYLRALTDAELGAGVVRVLLYGGLLVPVMLGLALVFALLLDEERAPARGFARLAIFLPYAVPGVIATVLWGFLYLPATSPLNQALRALELPEVDFLSPTGIYFALANIAVWGGVGYNTIVLHTALRAIPRELHEAARIDGCTPLQVALRVKLPLLTPALVLTALFSVIATLQVFAEPTTLAPLTNSLSRTWTPLMKVYQDAFARGDVHSAAATSVLIGLGTGLVSFGLLRVARRFGGLR
>NZ_CP034550.1|WP_033434127.1|4162397_4163684_-|extracellular-solute-binding-protein
MRLHLVQKSLAAALGLVLLAGCGGGAEETDGPVELSFWSWAPNIEKVVERWNAGHPGAKVVVSRQASGDDLVTKLLTSAKGGNPPDLAQVEYQALPTLVGNDVLADISAAAGGAEDAFAPGVWDQVTLGGSGVYAVPQDSGPMMFYYRADLFEQYGLTVPKTWDDYARTARDLRAKAPDRYLGTFSSNDPGWFAGLVQQAGGQWWSVEGDKWKVAVDDAASRKVTAYWSGLVAEGAVDKSPMYTPEWNKALNDGVQVGWLSAVWAPGVLQGNAGSTKGKWAVAPLPQWDPATPRTGSWGGSTTAVTSGSKHQRVAAEFAVWLNTDPGAVAALVTESGVYPAATAAQTGGALSGPPAFFANQPDFYTLAAEIAGTAASFTWGPNVNVAYTTYKNAFGEAITAGADLVPALVKVQEATVADLKANGFSVG
>NZ_CP034550.1|WP_033434128.1|4163855_4165868_+|beta-galactosidase
MTFGVFRPGASSWPVGVDGLVYGGDYNPEQWPEQVWAEDVELMRRARVNLVSVAIHSWALLEPRPGEFDLGWLDRLLDLLHGAGVAVNLATPTVVPPAWLYRAHPEIRPVTRDGVVLDRGSRATFCPSSPAYREAAARITRTLAARYSGHPALALWHVHNEYGAPLGACYCPESAGAFRRWLRTRYGSPDALNAAWGTTFWGQRYGDWDEVEPPRATATAGNPAQELDFLRFCSDELLACYRAERDVLREHSHLPVTTNFMTTNCRSIDYWRWGAEVDVVANDHYLTAEAERPHVDLAMSADLTRAVADGQPWMLMEHSTSAVNWQPRNLAKRPGEMRRNSLAHVARGADAVMFFQWRASRFGAEKFHSAMLPHAGTGSRIWREVVDLGADLVALREVRGSLVRANVAVVWDWESWWALELPWRPSVDLAYRERVEAFYEQLWDAHLTVDFVPPEGDLSDYRLVVVPSLYLTTAAAAKVLADYVAGGGTLVVSYFSGIVDGNDAVHPGGHPGALRDVLGLTVEEFLPLRRDERVALTGGLVGDVWAEDVRPAGAEPVLRYADGPAAGGPAVTRNRFGAGSAWYVSTRLRGEALAHVLREVCADAGVDPVDLPRDVEVVHRHGVDADYAFVVNHTASAAEVALRGVDLLTGTAWPAGVTVPAGGAAVLRLE
>NZ_CP034550.1|WP_033434129.1|4165969_4166710_+|hypothetical-protein
MQTGSGVHCDVRPVDDCLVVHPTGVLNLANYASLRGTLLKCAVEQPRALVVDLADLEVEGECLLSVFAAVWLRTCDWPSVPLLLAGSAERLPRRTALRRYVSVHDTLEEALAHVDQPPPCRRATRVLPAAPGSPRLARAFVRRVCDDWSVPEQAVHTAVQVASELVTNTVSHARSEARLRLELRCDMLTVAVSDDDPTPVVLRDPGAAPQEGTGLLVVAQLARTWGCVPDRGKGRKVVWAVLTTSE

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Crispr_ID: NZ_CP034550_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_10

4341310-4341424

Orphan

Consensus_repeat	Method
ACGACCGGGGCCCGAATCGCCGGGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP034550_10

>merge|NZ_CP034550|10|4341310-4341424|CRISPRCasFinder
ACGACCGGGGCCCGAATCGCCGGGGGCCGGGGCGCCGGGGCCTGGACCGCCGAAGCCTGAACCGCCGGGGCTCGAACGACCGGGGCCCGAACCGCCGGGGCCCGAACCGCCGGGG

>NZ_CP034550|10|9|4341310-4341424|CRISPRCasFinder
ACGACCGGGGCCCGAATCGCCGGGG	GCCGGGGCGCCGGGGCCTGG
ACCGCCGAAGCCTGAACCGCCGGGG	CTCGAACGACCGGGGCCCGA
ACCGCCGGGGCCCGAACCGCCGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033434393.1\|4350588_4350918_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP034550.1\|WP_033434390.1\|4347971_4348202_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766722.1\|4341429_4342428_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377393
NZ_CP034550.1\|WP_084716984.1\|4342882_4343881_+\|GAF-and-ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP034550.1\|WP_033434386.1\|4340927_4341284_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP034550.1\|WP_084716992.1\|4335319_4337584_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP034550.1\|WP_033434380.1\|4330437_4331844_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP034550.1\|WP_033434384.1\|4337702_4337996_+\|DUF3040-domain-containing-protein	unknown	unknown	gnl\|CDD\|378610
NZ_CP034550.1\|WP_153278924.1\|4338232_4339861_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP034550.1\|WP_033434392.1\|4350066_4350453_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP034550.1\|WP_033434381.1\|4331813_4332956_-\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	unknown	unknown	gnl\|CDD\|239432
NZ_CP034550.1\|WP_033434394.1\|4355529_4356921_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP034550.1\|WP_033434382.1\|4333637_4334561_-\|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|379143
NZ_CP034550.1\|WP_051766728.1\|4333076_4333529_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434388.1\|4344415_4347229_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276938
NZ_CP034550.1\|WP_033434389.1\|4347498_4347696_+\|antitoxin	unknown	unknown	gnl\|CDD\|379416
NZ_CP034550.1\|WP_033434391.1\|4348390_4349857_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|214473
NZ_CP034550.1\|WP_033434383.1\|4334722_4335154_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107221
NZ_CP034550.1\|WP_153278213.1\|4350990_4355433_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|237951
NZ_CP034550.1\|WP_033434385.1\|4339857_4340931_+\|cobalamin-binding-protein	unknown	unknown	gnl\|CDD\|227345

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033434393.1\|4350588_4350918_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	1.4112e-24
NZ_CP034550.1\|WP_153278213.1\|4350990_4355433_-\|HAMP-domain-containing-protein	gnl\|CDD\|237951	PRK15347, PRK15347, two component system sensor kinase.	1.99778e-71
NZ_CP034550.1\|WP_051766722.1\|4341429_4342428_-\|hypothetical-protein	gnl\|CDD\|377393	pfam04632, FUSC, Fusaric acid resistance protein family. This family includes a conserved region found in two proteins associated with fusaric acid resistance, FusC from Burkholderia cepacia and fdt-2 from Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.	0.00851724
NZ_CP034550.1\|WP_084716984.1\|4342882_4343881_+\|GAF-and-ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	4.80844e-09
NZ_CP034550.1\|WP_033434386.1\|4340927_4341284_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	3.00998e-17
NZ_CP034550.1\|WP_084716992.1\|4335319_4337584_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	5.33821e-31
NZ_CP034550.1\|WP_033434380.1\|4330437_4331844_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.02579e-60
NZ_CP034550.1\|WP_033434384.1\|4337702_4337996_+\|DUF3040-domain-containing-protein	gnl\|CDD\|378610	pfam11239, DUF3040, Protein of unknown function (DUF3040). Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.	1.18048e-09
NZ_CP034550.1\|WP_153278924.1\|4338232_4339861_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	9.34383e-40
NZ_CP034550.1\|WP_033434392.1\|4350066_4350453_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.71241e-19
NZ_CP034550.1\|WP_033434381.1\|4331813_4332956_-\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	gnl\|CDD\|239432	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).	1.60399e-118
NZ_CP034550.1\|WP_033434382.1\|4333637_4334561_-\|PrsW-family-intramembrane-metalloprotease	gnl\|CDD\|379143	pfam13367, PrsW-protease, Protease prsW family. This is a family of putative peptidases, possibly belonging to the MEROPS M79 family. PrsW, appears to be a member of a widespread family of membrane proteins that includes at least one previously known protease. PrsW appears to be responsible for Site-1 cleavage of the RsiW anti-sigma factor, the cognate anti-sigma factor, and it senses antimicrobial peptides that damage the cell membrane and other agents that cause cell envelope stress, The three acidic residues, E75, E76 and E95 in Aflv_1074, appear to be crucial since their mutation to alanine renders the protein inactive. Based on predictions of the bioinformatics programme TMHMM it is likely that these residues are located on the extracytoplasmic face of PrsW placing them in a position to act as a sensor for cell envelope stress.	3.24696e-17
NZ_CP034550.1\|WP_033434388.1\|4344415_4347229_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	5.52241e-31
NZ_CP034550.1\|WP_033434389.1\|4347498_4347696_+\|antitoxin	gnl\|CDD\|379416	pfam14013, MT0933_antitox, MT0933-like antitoxin protein. This family of proteins contains the MT0933 protein, which has been identified as an antitoxin to /protein MT0934. This family of proteins is found in bacteria. Proteins in this family are typically between 61 and 90 amino acids in length.	4.4784e-11
NZ_CP034550.1\|WP_033434391.1\|4348390_4349857_+\|trypsin-like-serine-protease	gnl\|CDD\|214473	smart00020, Tryp_SPc, Trypsin-like serine protease. Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.	2.11657e-28
NZ_CP034550.1\|WP_033434383.1\|4334722_4335154_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	1.81734e-26
NZ_CP034550.1\|WP_033434394.1\|4355529_4356921_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	5.29027e-38
NZ_CP034550.1\|WP_033434385.1\|4339857_4340931_+\|cobalamin-binding-protein	gnl\|CDD\|227345	COG5012, COG5012, Predicted cobalamin binding protein [General function prediction only].	1.46675e-20

>NZ_CP034550.1|WP_033434386.1|4340927_4341284_+|STAS-domain-containing-protein
MNPARTLTCTTTVDGDTARIEVDGDITYTNGDRLPTAVGELFAAHPVRRLHLDLAGLGFCDSSGLGALLGVLRIATATGAELHLENRPPSLDRLLRRTRTFDHLTRSADRERKERLDH
>NZ_CP034550.1|WP_033434385.1|4339857_4340931_+|cobalamin-binding-protein
MTTAELTDASCADLLWQAVRVGDEQAAVELVLDAFARGLDPEVLLLDVIGGVQRKVGVEWAANRLSVADEHAATAIDERAVAALTRVLPRREPHRHRVVVACVDGEWHGLPARLLAEVLRLRGFRVDYLGAQVPTPHLITHLHRTGPDAVALSGSIATRLPTAHATITACQAAGVPVLVGGSAFGPDGRYARMLGADLWAPDARTAADLLGDAPLPRPRDVHQPIDDLPHLGDQEYTMVSRTSRQLVKAVYTGLEELLPVMRTYTDAQRHHTAEDLAHIVDFLATALYTDDRALFTGFTAWTADVLRARGVPARFLVPALDLLAGELRDFPRATDLLGAARAELLATSDNPDPGSTT
>NZ_CP034550.1|WP_153278924.1|4338232_4339861_+|SpoIIE-family-protein-phosphatase
MVQQIGVDDGTGWLSAPTPALVAEADGSVRALNDAARSLFPTAAVGGSLAAGFPSWLAHAHTEFTVRSGPAAQPVQGPVERRSFEAHPVGRDRGAVMWWLVEDTDVRVAREALGVERERTALLARMSSALSTSLHPERCMEVTARLAADHLADAAVVIAPGRQDEYPVAHCVRDGAVAHARLAFDPYDVPGLGEALQGFPPVPSHWLDPSSAPTWLLPADFGEVASIVVTPLPGHGVPAGALVLLRGPGRQSFTEHEETFARLFAARAGAAISAARMFAQQGAITDVLVRDLLPPTLRQLGGVEYAGRYRASVDTERIGGDFYDVHPVPGGEDEALAVLGDVCGKGLEAAVLTGKVRTTLQALLPLAADHQRVLRLLNNALLSTHDSRFVTLVLASVRRVGAHVRLRLTSGGHLPPLVVRATGEVHEVATSGTLVGVLPEITSTTAEVVLAPGETCLLYTDGITEALGGPMGDEMFGEERLRAALADCAGMPADAIVEHVHMLASQWVGSGEHDDIAVLAVTAPRGRHLTAVDGHGRGRYTA
>NZ_CP034550.1|WP_033434384.1|4337702_4337996_+|DUF3040-domain-containing-protein
MDLNRYERRQLRRIRRWFERTDPVLVAVLSGRPPGHRGARRKCLRLLVDAVGAACLVAGVLVHLPLLPVGFLLVMAGACLHTAACRHDALLRRAPDD
>NZ_CP034550.1|WP_084716992.1|4335319_4337584_+|SpoIIE-family-protein-phosphatase
MTARQDQHRIPGQRTEPDPPARTEPDLPAPTRTEPDLPARTAVLFASLSGPAHLLEAVNPAFAEVVGGPERARPGTPLAAAAPDLVEQGVVALLDRVHRTGEPHVARDTRLSPGWPGARREALFDITCEPRCDGDGAVVGVRLIGVETARLRHTRRLAAQQRALLEQVAREAPLEQVLDGMVRAIEELAPGVVASVLLADEDGGHLRHGAAPGLPDFYNEAVDGIATGEGVGSCGTAAHRRRPVVVTDIAGHPYWDDFRDLARRASLAACWSTPILAGDGRLLGTFALYHRTPCAPRESDLALCGLFAGIAALAIERHRKEQAHREAEARARAARDDLAFLLEAGTALAERLDHTSTLRRLAELCAPALAPLCAVDVLEHGVVRRVATAAPTAAQRRLLADHLPDPDDPDDAVARVLASGLTEAARRAPARPGPWAELGVTGYLCVPLVDEGRAFATVTLLGTGDHAFDGRGVALAEELARRAASAARNAHQYTQRVALARDLQAGLLLPDPPDVPGAALATYYRPAGEGLDVGGDFYDVFPLPGGEWAFLVGDVCGRGARAAGSTALVRHTARAVARLLPDPVSVVHAVNRALLERPDSHGTGFVTLVYGHLRRTGTGLTADLVRAGHTTPLLLAGAGRVEPVHANGTLLGVFPDHELALEPRRLHLAPGQGLVLVTDGITEARDAAGDQFGEERLTGALTRLPPHPSPRAVVDAVAGAVRAFTGNADNDDDRAALVLIATDTATDTATDTDG
>NZ_CP034550.1|WP_033434383.1|4334722_4335154_+|Hsp20/alpha-crystallin-family-protein
MLMRTDPFRQLERLTQQLFGSEGTTARPAPMPMDAYRRGDELVVSFDLPGVAPDSIDLNVERNVLTVSAERAAETDEQVQWQVTERPRGVFSRQVFLGDTLDTDRIEATYDAGVLTVRVPVAEKAQPRRITVNPGGQARTIDT
>NZ_CP034550.1|WP_033434382.1|4333637_4334561_-|PrsW-family-intramembrane-metalloprotease
MVVAGRAGRPWPRVFLTGLALWVAAVVITYVTGNANLVPTLVLLGSFLVPATFVSWAFGHRHSGEVTAELVFRTFTVGGVLGVLAASLLETYLLHPSPLLFVGVGLIEEAVKLGALALLTRHLVAKSTRDGLVLGASVGFGFAAFESAGYALTAMITANGLSLVDLVSTELLRGLMAPFGHGLWTAVLGGVLFSRSTRDHFVLTGRLLAAYLGISLLHALWDSMNSIAVLITLVLTDQPWQQRLLEVGYLPQPTAAQVRLFTAFTWLGLALISLVGLLWLAVLVRSSRRSPGPVAVRGYRVPVRADR
>NZ_CP034550.1|WP_051766728.1|4333076_4333529_-|hypothetical-protein
MRFDAAGNAVDGTGRRFDAARLWAGGAATALVAGLLAVVGILVARGLLGVAVLAPKGEGAWGNANTLTYALVSAACALLATGMAQLLLATTPSATRFFGWIMALLTAIAVVLPLSLDVSTEGKVFTAVLNLLIGVAITVLVRGVAVGARR
>NZ_CP034550.1|WP_033434381.1|4331813_4332956_-|mandelate-racemase/muconate-lactonizing-enzyme-family-protein
MTSPAVLDRISSVALSSVTLPLPTGISDAKVFTGRQRPMTEVAVLFAEIRTEAGLAGIGFSYSKRAGGPAQFAHAREVAPDLVGEDPSDIGRLWTKLVWAGASVGRSGAATQALAAFDVALWDLKAKRAGLPLAKLLGAHRDSVRCYDTSGGFLHEPVERIRDNATRALESGVGGVKVKVGLPDTAEDLRRVAAVREHLGDGVPLMVDANQQWDRPTATRACRALEEFDLVWVEEPLDAHDAEGHAELARALATPVASGEMLTSVAEHWELIRAGAVDVLQPDAPRVGGITQFLKLATLADHHHLQLAPHFAMEVHVHLAAAYPREPWVEHFDWLHPLFNERLEISGGRVHLSDRPGLGIALSEQARAWTVHSVVVDAPR
>NZ_CP034550.1|WP_033434380.1|4330437_4331844_+|serine-hydrolase
MLSVILSGLLVLPAAPTTTPTPATIDAVVEQYRERTGLPGVAVAVTRGTTVVHAAGYGHAPGGEPISAHTPMAVASVSKSFTALAVMQLVERGRIRLDDPVRAHLPEFTMADPRADRITIRRLLDQTSGMSDTTHRSFSGPRVHTLREAVAAMRGSTLAADPGTRWEYHNPNFQLAARLVEVVGGVPFAEHLRREVFAPLGMRDSSTADTERDLPPTARGHLVVLGVPVALPEPPAFGNGSGGVLSSAHDMAAWLVMQNSGGTPVATPETIAATHSAAPGSYALGWFVGTTPAGARLVDHGGDLFTSTAYQALLPESGHGIAVMANTGTRHGDAEALGRRLVDLLEGRQPAPANDPYRVVDAVLLGSAVAVAVLSVRGVARARRWAARRPRWATARLLLLPLPLVLAATVHRVVGYLYRGRDVAWLQVAYLYPTFVVALLVAAVGGVAVLAARLLARRGQRGASTTTE
>NZ_CP034550.1|WP_051766722.1|4341429_4342428_-|hypothetical-protein
MSPISADHQEPARIGTTDVRRLESATRVLREQDYRDGGGACRTALRAQIAHGRRLLRAQAREQVRDRLLVAVADLHNLAGWTAFDTGHPRAARAHYRSALALLEGHRQQDLVANVRYRSSRAHLHRHDPTGALRELEHARAAADRGASARTSAIISVNQAWAHAMRGDRVEALSLLARGEEELAAAGGGAPRPWSAFFDPTDLQAMTGTVHTELAAAGDRMCTRFAIPALTAAVEGYGAGMRRSAAFSLTALALDHVLDGDPVRGARVGVRAVHLAEELTSTRVADRMRPLLRECEQRHHPALVDLAGRLRVLVDRRDSRWARPEDRQARGS
>NZ_CP034550.1|WP_084716984.1|4342882_4343881_+|GAF-and-ANTAR-domain-containing-protein
MEPARALADAARELAAQATLSATLDRIVALAKTLVPGADSVGLVLARSGGLRSVAATDRLAADCDTAQLEAGEGPCLGAAGEEGTLLVVDLADGRWPGFAAGAVRRGVHEVLACPLVGGEWTGAALSLYAVAPGAFDHRAQDLADLYAVHAAVAMQSALRADDLRLAVVSRETIGRAVGILMQRHHLTARQAFVLLSRASQRVNIKVRHVADLVVTTGVDPDDTAELVRLAERVAGPRRGVRSRASTAEQVEAARLRAESAASRAADALHRSVTTLLSVARAHERAAAVHLRAAAAGGADAGYHRRRAAEHQRAAAAARRTLRARRDGSGTG
>NZ_CP034550.1|WP_033434388.1|4344415_4347229_-|tetratricopeptide-repeat-protein
MAVEIGLLGEVAAGVGGRPVDLGPARQRCVLAALAVDVNHVVPAERLVERVWGVEPPRRAHATLSSYVSRLRHALSADASASLVRRSGGYVLLVERSAVDLHRFRDLRARAAAAAGDDARVERLLAAALELWRGEALTGVDSAWAGTERDRLHQERFGVELDLVDCRLRLGQGEQLVAELSRLAVEHPLDERVAGQYMLALYRGRRAADALEHYQRFRTHLVAELGADPGAALRELHRRILNSDASLLAPGREAPAPAAEQVVTPRQLPAAPASFVGRHDELARLDAALEGASRTSRTMVISAIAGSGGMGKTWLALHWAHRYADRFPDGQLFVDLRGFSPDREPMNPAVAVRGFLDALGVEPSRVPVAPHAQAALFRSLIADKRVLLVLDNAADTAQVVPLLPGTDSCLVLVTSRNQLSGLISAHGAAHLMLDALPDDEARALLAARLGRARVNTEPQAVEELIRLCGGLPLALSVIAARAGMRPGVPLGAFAAELRDLGLQALDEDPAAGISTVLSWSHRALTREQAAVFALLGIAPGPDIGLHAAANLTGLSPGATRSVLRELEQASLVGRDARGRYRMHDLVRRYAGEAARRDLPEADRDAALRRVIDFYVQTAHTGHRLLDPHATPVKMDPPVPGCRPLPLEDDPAAMEWFQAEHGCLLAAQHAAAAIDWSPPVWRLALVMTSFHVRRGHLNDNLRLWQEALVAADRAADPATRVLVLRNIGFAYAKLTRHDEAMAHLERAIALARESGDSFLLAHTHIALAWAWELDDEWARALEHSLKALEVLRTMEGSSAREAVALNMAGWYSAKMEQYDHAQEYCEAALVLHRRNEDRNGIAATLDSLAYIAHRTGRSAQSLAMYQEALGIFRDLEHTYGAVESLEGMGHPLAALGRPEEARAAWLEAIDMYRAQQRDHLAARVEVHLVELERRLQLR
>NZ_CP034550.1|WP_033434389.1|4347498_4347696_+|antitoxin
MGIGDKFDELKEKAKDALGQHGDKVDQGVDRAGQFVDERTGGQHTEHIQQGTEKAKEGLDRFGQQ
>NZ_CP034550.1|WP_033434390.1|4347971_4348202_-|hypothetical-protein
MSTTESGQVTGTRDKDYNIIWFVEACLSNALRLEGYIADAERAGDAELADFFRRAQAESRKGAEQGKQLLASRLGS
>NZ_CP034550.1|WP_033434391.1|4348390_4349857_+|trypsin-like-serine-protease
MKRPRPGAASLAAAAVLLPLLVAAAPGHAPAANYEGGTVPAGADAGPSFHNGQPATVDEFPAVIAGLREGGTRPRGQSCTGSVIAPRKVLIAAHCADAAGEKSFLYGLDDLDAGGGFRTAVVEYAKHPRYVNFDQGYDVAVVTVADDIPVPGGRYARFATSADAGLVTPGDNGLGFGYGKKEFDDSSRDVTLAKATLPVVDGDRVCQGVGAGFKSATMICAGYADGRTAILPGDSGGPLVVAGKVVGVASWSRSDFKWYSVYARLTNDMGDWVARQVGDSTVGVSPAGVTAPAGGHVSTTVTTAAGPTGPEQATLSASGLPAGVRALFQPAAVRTGSNAKLTFEVAATAPSGTHPITVTATTASGRTGTAPVTLTVRGQNPGDVAVTANPSSASVSQGFFARFTVGASGGAGDLALSATGLPAGATIRFSPPAVTPGGSGTALLWTGFQTPPGTYPVVIRATAADGRTGTATFTLTVTGWGTSGRGVA
>NZ_CP034550.1|WP_033434392.1|4350066_4350453_-|ATP-binding-protein
MRNEPAAPVAVTLPASAGSSARARQVLAEAASTWGLSPDVTDDAALVVTELVSNAVDHAEGPVGLTVSRTATGVRIEVADNSPALPQPRPVQVDSARGRGLIIVEALSASWGTEERDGGKVVWAELAG
>NZ_CP034550.1|WP_033434393.1|4350588_4350918_+|STAS-domain-containing-protein
MELRVRSEVRGGWTVVAVSGELDADTVPLLSDHLEESTGDQVVVDLSGVPFMDTTGLSLMLDWHRRLDGAGGEFRMASLQPSVHKLFRLTELTEVMHIHDTVEAATAAR
>NZ_CP034550.1|WP_153278213.1|4350990_4355433_-|HAMP-domain-containing-protein
MTTVQDDADVTLARLLSAMREMRDGNFRRRLVVPRGGVGAELAEAFNEIAERNQWLVGELTRVRQSVGQEGILGERLAPSTGTGGWELAAGAVNGLIDDLTRPTAELSRVLAAVAEGDLSQEIVVDARGEVAALVESFNSMTATLRTFAGEVTRVAREVGTEGRLGGQAQVPGVAGTWRDLTDSVNFMADNLTKQVRDIAQVATAVAQGDLTQKITVTVAGEMLELKETVNTMVDQLSSFADEVTRVAREVGTDGRLGGQAQVTGVAGTWRDLTDNVNFMANNLTSQVRNIAQVATAVAQGDLSQKITVDARGEILELKTTINTMVDQLSAFAQEVTRVAREVGTDGRLGGQAQVPGVAGTWRDLTDSVNFMAGNLTSQVRNIAQVTTAVAQGDLSQKIDVDARGEILQLKTTINTMVDQLSSFAAEVTRVAREVGSDGRLGGQAQVPGVAGTWRDLTDSVNFMAGNLTSQVRNIAQVATAVARGDLSQKITVTARGEILELKDTINTMVDQLSAFADEVTRVAREVGTDGRLGGQAQVPGVAGTWRDLTDSVNFMANNLTAQVRSIAQVTTAVALGDLSQKITVDARGEILELKSTINTMVDQLSAFADEVTRVAREVGTDGRLGGQARVPGVAGTWKNLTDNVNVMADNLSTQVRSIAEVATAVARGDLSQKITVEAKGEVAALAETINGMVDTLRAFADEVTRVAREVGTEGILGGQARVPNVAGTWKDLTDNVNSMANNLTNQVRNIAQVTTAVALGDLSKKIDVDARGEILELKTTINTMVDQLSSFAQEVTRVAREVGTEGKLGGQAEVEGVSGTWKRLTENVNELAGNLTRQVRAIAVVATAVTAGDLTRQITVDASGEVADLKDNINRMISNLRASTRANQEQDWLKTNLARLSGQMQGHRDLKAMASLVMSELTPLVSAQHGAFFLVDNESEVLELTAAYGWSPRGGRPWRFKRGEGLIGQVAVEKKTVLVTDVPPGYLQVTSGLGAAPPANLVILPIVFQGETLGVIELGSFGEFTEVHLDLLDQLKENIGVNVNTMLANARTDSLLAESQRLTEELRAGSVELEARARQLSSASKYKSEFMANMSHELRTPLNSLLILAKLLADNLDGNLNPKQVEFARTIHSSGTDLLQLIDDILDLTKVEAGHMQVQTDPVRVSDLVAYVEALTSPLAAEKGLAFDVVVDPDVPSTLHTDEHRVQQILRNLLSNAVKFTHDGEIKLRIRVVGDSVAFDVQDTGIGIPAEKLSVIFEAFQQADGTTSRKYGGTGLGLSISRELSTLLDGRLDVRSEPGFGSTFTLYLPLGEQGLLPQVVVEAQELPELLTPAEPAAEPVVAPEELPPPPMRFHGEKVLIVDDDLRNVFALTSVLELHGLNVIYADNGITGVRALEQYDDVALVLMDIMMPELDGNATMAAIRAMSRYADLPVIAVTAKAMKGDREKSLASGATDYVTKPVDTDHLLRLIAFYLGVEQD
>NZ_CP034550.1|WP_033434394.1|4355529_4356921_+|serine/threonine-protein-phosphatase
MAQGYRQGAETGLDLDSWHRLVDGFHEAVVVLDPDAVVRLVNPLAAVLFPDARPGAVLPQPGGRRQDLGGGWTAWYRAADDFLDRAGRRFALFSDRAEALRAVVELAPARCAVAVLPGLRGRLEWWRRTAGGEVAVTRTPRQAATGAAGLAAVLDGETGQAEVTTSGEGPWGVSGTGVAVPLTEGGALLCFGGVRDTDLLRRYAERASVAVAAGTRFAEQERVVSALRANLLPAPLPEVPGVRLARVYEPAHAEALVGGDFYDVHPREDGSAAFVLGDVAGNGVEAAAQSGRVRQSLHTLLLVEQRPAQLLHLLNAALRAAGSRLFTTLVVGTMVAVQAGGLRLTLAAGGHPAPLVLRTDGRVDEVAVHGGIVGVLPEVRFHQTTVVLAPGETLLLYSDGVTEARKDGDRQELFGDLRLKAALSDCAGMPAERVADHLRRLVFGWLGTAEHDDLTLMVVQATG

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Crispr_ID: NZ_CP034550_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_11

4730615-4730697

Orphan

Consensus_repeat	Method
CGTACGGTGTGCCTGAACGCGGCGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_11

>merge|NZ_CP034550|11|4730615-4730697|CRISPRCasFinder
CGTACGGTGTGCCTGAACGCGGCGAGGGGGCGCACCCGCCCGTGCCGGGACCAACCCCGTGCGGTGTGCCTGAACGCGGCGAG

>NZ_CP034550|11|10|4730615-4730697|CRISPRCasFinder
CGTACGGTGTGCCTGAACGCGGCGAG	GGGGCGCACCCGCCCGTGCCGGGACCAACCC
CGTGCGGTGTGCCTGAACGCGGCGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033431712.1\|4727814_4728807_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP034550.1\|WP_033431709.1\|4721964_4722627_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033431714.1\|4731276_4732011_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|99813
NZ_CP034550.1\|WP_051766037.1\|4726393_4726966_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
NZ_CP034550.1\|WP_033431715.1\|4732012_4732285_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376468
NZ_CP034550.1\|WP_033431713.1\|4730710_4731307_+\|sulfite-oxidase-like-oxidoreductase	unknown	unknown	gnl\|CDD\|239027
NZ_CP034550.1\|WP_033431720.1\|4735951_4736629_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP034550.1\|WP_051766033.1\|4718660_4719476_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP034550.1\|WP_051766038.1\|4729203_4730373_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP034550.1\|WP_033431803.1\|4736836_4737226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033431707.1\|4719472_4720375_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP034550.1\|WP_033431717.1\|4734069_4734285_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033431710.1\|4724263_4725361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033431708.1\|4720379_4721705_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP034550.1\|WP_051766081.1\|4734584_4735913_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP034550.1\|WP_033431716.1\|4732316_4733957_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274513
NZ_CP034550.1\|WP_033431718.1\|4734369_4734588_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275060
NZ_CP034550.1\|WP_033431711.1\|4727046_4727559_-\|DUF1360-domain-containing-protein	unknown	unknown	gnl\|CDD\|369207
NZ_CP034550.1\|WP_033431799.1\|4723146_4724229_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|223512
NZ_CP034550.1\|WP_084716507.1\|4738042_4738510_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033431712.1\|4727814_4728807_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	1.73025e-124
NZ_CP034550.1\|WP_033431720.1\|4735951_4736629_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.91053e-80
NZ_CP034550.1\|WP_033431714.1\|4731276_4732011_+\|oxidoreductase	gnl\|CDD\|99813	cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	6.64672e-88
NZ_CP034550.1\|WP_051766037.1\|4726393_4726966_-\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	1.27207e-05
NZ_CP034550.1\|WP_033431713.1\|4730710_4731307_+\|sulfite-oxidase-like-oxidoreductase	gnl\|CDD\|239027	cd02109, arch_bact_SO_family_Moco, bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	1.69213e-92
NZ_CP034550.1\|WP_051766033.1\|4718660_4719476_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.04127e-65
NZ_CP034550.1\|WP_051766038.1\|4729203_4730373_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.10187e-61
NZ_CP034550.1\|WP_033431707.1\|4719472_4720375_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.26648e-80
NZ_CP034550.1\|WP_033431715.1\|4732012_4732285_+\|hypothetical-protein	gnl\|CDD\|376468	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA. HypA is a metallochaperone that binds nickel to bring it safely to its target. The targets for Hypa are the nickel-containing enzymes [Ni,Fe]-hydrogenase and urease. The nickel coordinates with four nitrogens within the protein. The four conserved cysteines towards the C-terminus bind one zinc moiety probably to stabilize the protein fold.	0.00235298
NZ_CP034550.1\|WP_033431708.1\|4720379_4721705_-\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.45244e-50
NZ_CP034550.1\|WP_051766081.1\|4734584_4735913_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.0507e-49
NZ_CP034550.1\|WP_033431716.1\|4732316_4733957_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	0.00115002
NZ_CP034550.1\|WP_033431718.1\|4734369_4734588_-\|hypothetical-protein	gnl\|CDD\|275060	TIGR04216, halo_surf_glyco, major cell surface glycoprotein. Members of this family are the S-layer-forming halobacterial major cell surface glycoprotein. The highest scores below model cutoffs are fragmentary paralogs to actual members of the family. Modifications include at N-linked and O-linked glycosylation, a C-terminal diphytanylglyceryl modification, and probable cleavage of the PGF-CTERM tail.	0.00476263
NZ_CP034550.1\|WP_033431711.1\|4727046_4727559_-\|DUF1360-domain-containing-protein	gnl\|CDD\|369207	pfam07098, DUF1360, Protein of unknown function (DUF1360). This family consists of several bacterial proteins of around 115 residues in length. Members of this family are found in Bacillus species and Streptomyces coelicolor, the function of the family is unknown.	1.70709e-43
NZ_CP034550.1\|WP_033431799.1\|4723146_4724229_+\|glutathione-S-transferase	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	6.21133e-145
NZ_CP034550.1\|WP_084716507.1\|4738042_4738510_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	9.87485e-21

>NZ_CP034550.1|WP_051766038.1|4729203_4730373_-|AI-2E-family-transporter
MGAGNRRWADRGDAIGHGLSWLARWSTRLALAAVGFVLVWWLIGKLWVIVMPVLLGLLITTVLWPPARWLRSRGLPPALAATLVLLGGLAVLGGVLALITTSIASGVPQIADSATKALQQARDWLSGPPLNLGEGQLDRLVDQGTDQLQSSIGSIANGLLTGVGTVTSGVVTGLVALLLAFFFVKDGPRFTPWLRGVVGERAGSHLSVVLDRVWATLGGFIRTQAVVSLVDAVLIGLGLVVTGVPLAVPLAALTFLGGFVPIVGAFVAGALAVLVALVSNGLTTAIIMLVVVVLVQQLEGNVLQPILQSKSLNLHAAVVLLAVTAGSSLYGIAGAFLAVPAAATAAVVLRYLGEVIDRQSGPEEPSDTPPAEPERDASRGRSREEETSA
>NZ_CP034550.1|WP_033431712.1|4727814_4728807_-|sigma-70-family-RNA-polymerase-sigma-factor
MSSTTTTTKTRPQRADASRREWSQDADLVGHYLREVGGTPLLTAEQEVDLARRIEAGVYAAELLRAADAGEGPPMELDRRRALREVAADGRRAKDHMIRANLRLVVSVAKKHAYRGLPFLDVVQEGNLGLIRAVEKFDYAKGYKFSTYAIWWIRQAIERGVAEQTRTVRLPVHVFEELSKLRKVERKLRLELDRDPTHEEIAQASGTPLARVVELLEAGRSAISLETPVGDDGSTSVADLIEDVEAVQAHEVVEHNGMVAELLNLVHTLPPRQALILTLRYGLTDGRPRTLQEVAAEVGLTRERIRQLEKESLRHLRSPERSQALLAWTG
>NZ_CP034550.1|WP_033431711.1|4727046_4727559_-|DUF1360-domain-containing-protein
MSIARSFERVRTAYSNGERRPLAGYLSAMGSYAALVGAAALIGRRTGARLPERVSAGDVALLSMATHKASRLLTKSSVTAALRAPFTRYEEPAGVAEVNESVRGDGVRHAVGELVTCPFCSGVWIATALTAGHVLAPRATRLAMTALTAVGTSDWLHLGYEAAKRHLARD
>NZ_CP034550.1|WP_051766037.1|4726393_4726966_-|hypothetical-protein
MSKQRTQDKSSRADAGKLSDMTVDELRHKASELGVRGSHDMHKAELVRAVADAMGGGAPEPRSGDDRGGVRTGEGTSKSLKYSQEVRSTDDEPERPGRSLVTTNHDVIRQWAEARDATPATVPGTEHGDHLGVLRFDFPGHGGDGLRHVDWDEWFATFDERRLNFIYQEQRSDGSPSTFFQLESPDREDA
>NZ_CP034550.1|WP_033431710.1|4724263_4725361_-|hypothetical-protein
MSTIRESRATPAHWTSRPLPVHLVGSLPPPLCEDPAAAMGWFLRHRRGAELTALPYDRDPRWIIDWLDRLAAVPALERVRGGASRGYDDMPHYRVLPGRRLVPGDVAPGRPAQAEAAFAALGAAGAGDARVQVGIPNPLDLALFASGSVTAARDWMPVVREAVLGEVAQIAATWGDRVQLQLETPAVLVAYHRTSREAWSMLTRDLAAQVAEVLRAAPRARWVLHLCYGDLEHVPVFAPTDLDPAVEFLNGLADLLDRHRLPMPTVHLPVTSGDDPPPTDPGFFEALRRLRRGVDVIAGVVAESHPAATRRALYLTVEALGAPVTGVAAACGYGRRTVEAAAANLELAAALAREWGPLVEPRQEW
>NZ_CP034550.1|WP_033431799.1|4723146_4724229_+|glutathione-S-transferase
MSDPSKSAATGADPEQGNPEHGRAGTYSVKGKEYTRDTRYITTRITADGRDGFPVEAGRYRLVAARACPWANRAIIVRRLLGLEDALSIGLPGPTHDARSWTFDLDPGGRDPVLGIERLQEAYFKRDPDYPRGITVPAIVDTTTGAVVTNDFAQITLDLSTEWRAHHREGAPDLLPEAHRDEIDEVNRRVFTEVNNGVYRCGFAGSQQAYDEAYRRLWTALDWLEERLADRRYLVGDTITEADVRLFTTLVRFDPVYHGHFKCNRNKLAEMPVLWAYARDLFQTPGFGDTVDFRQIKEHYYLVHTDLNPNGIVPCGPDLSGWVTPHGREALGGRPFGDGTPPGPVREPVDPAHTPLSTVD
>NZ_CP034550.1|WP_033431709.1|4721964_4722627_-|hypothetical-protein
MTTWWGQEQPERPAPGADRQADRAVLELVRAEVLPRLPPEGHPARATALVDLGRQLVADYEANGCAEVVDEAVALCRRALRDTPVADVRRAAHAEALGAVLTKRFHATGSANDLNDAIVAYRDALRAPRADSTWDRTACQAALGDLVGRRYARTGRRADLDEAISRYRTAAHKTPRSHPTRRTYLTRLAEALTVRGKLTGSTLDLDEATDATAEATTPTP
>NZ_CP034550.1|WP_033431708.1|4720379_4721705_-|extracellular-solute-binding-protein
MRGPLLPPLVLLVASALSGCGGLGNRAGDAPNALVTMGFGLPDEHATARVQVFRDANPDIDVRINEGAFDEQQFLSAVAAGDPPDLVYAERRKLGGYAARGAVQPLDDCLAEHRVDLAAFRPAALRQVTHDDRVYGLPEFSSVRLMIINNPVVREAGLDPATLSTADWAGLPALTDRLARVTGGRPQRIGFDPKMPEFLPLWAKANGADLIGPDARLDDPRVVEAVRVTADLVERQGGWASFKAFRDTFDQFGANNQYVTGQLAAMPMDSWYLNTLATNSPDVDVTVVPFTDRAGNPLTESGGQAWAIPRGARHPDTACRFITTLTHPDTWVTAAKARRDALARAGKPYGGTFTANRVADERIFREVFDPKGNRVLQQGVPTVLALQEQAFALPPSPAASELVRAWEGAVNRVLNRQQSPEDAMAQAQREAERALKRVGGR
>NZ_CP034550.1|WP_033431707.1|4719472_4720375_-|sugar-ABC-transporter-permease
MSVTGREARAGWLFLSPWIIGFLAFTAGPMLFSLWLSLTHYDMLRPPTYVGLDNYREALTDERVGTALWNTVFFTALHVPAQVVLALALASLLRRAGRAAGFFRTVVYLPVMTPPVALAALFLLLLNGQNGAINAFLGWFGFTGPNWTTDPTWIKPGLVVMSLWTVGSTAVLYLAALTRVPLERYEAARLDGASPWRQFWHITLPGISGTVYFTVVVNTIASLQVFTEAYAMFFGARAKQSAEGDAALFYVIHLFQEAFGSLRMGYASALAWGLFLVIALVTAVQVRLSRRYVHYEGERP
>NZ_CP034550.1|WP_051766033.1|4718660_4719476_-|carbohydrate-ABC-transporter-permease
MKRVGVWAGLLVVALAFGYPFWWLVSASLKDRAHVFDNALLPRPFSPGNYVEVWRAVPLLTWVGNSVAVGLAAAVAATAASAVVAFGFAMFRFPGRDALFGVVLATMMLPAAVTMVPVYLEWHALGLATTQIPLWAQNLFGSAFYIFLLRQFFLGLPGEVFDAAKVDGANAWRLFTALGLPLARPGLVVVFVFELKAAWTDLIKPLIYLREPDLYTLPRGLKAVLDRFGEGGEAQWELVLAASAVATVPMVLLFLVAQRYFVRGTVTQHVE
>NZ_CP034550.1|WP_033431713.1|4730710_4731307_+|sulfite-oxidase-like-oxidoreductase
MGIVSPGFHGRRRPAVELPPGQYLTEDFPVLSAGPTPRVPLDRWRFTVTTETGEEHGWSWREFQALPAESVTTDIHCVTKWSKLGTHWRGVSLDTLLSDVDTAADFAVVHSYGGYTTNLPLEDLLDGRAWLAHRYEGEDLTPEHGGPVRLLVPHLYFWKSAKWVRGIRLVLEDEPGFWETLGYHEYGDPWREQRYQGD
>NZ_CP034550.1|WP_033431714.1|4731276_4732011_+|oxidoreductase
MAGTAVPGRLTWRVATLVDAVEETPTARTLVLEVPGWPGHLAGQHVDVRLTAEDGYRAQRSYSLAAPAKGDLVRITVQELADGEVSPYLVRGLSIGDPVELRGPVGGWFVWRPTDPSPVLLVAGGSGVVPLVAMVRARREAGVRTPFRLVYSVRSPGDRLYADELNRPEPGLDISYVYTRTTPEGWPAPPHRIGVPDVNSGGWPAEFEPACFVCGPTGFVEKVADILVALGHDPRRVRTERFGG
>NZ_CP034550.1|WP_033431715.1|4732012_4732285_+|hypothetical-protein
MDGGTEFVDGNALAGTLAEVFAVDVTAALARCGSCGETGPLAGLRVYGRAPGLVARCPGCESVVLRVNRGPGAAWLDLRGATCLRVDLPD
>NZ_CP034550.1|WP_033431716.1|4732316_4733957_-|tetratricopeptide-repeat-protein
MGGRWPEDPSEDGEPPDQARWVDHPERPDRPAWVDDAPTDPRLPALFPPAPPRSGPAAVLLNLTGLGLGYAYLGRWARAAVAAAGAVALVVVAYATDAANSPGPWRLVAVAWFAALALDAARIATRHPRPPARATPVLAGALAVVLVAGAYAGYGLAGHAAHTAGLAAQAGGNCAAAVDEFEAVTGFYELTLSPDVAAAARGLTECGAYTWATEAQRAGEHATAVARYRHFRQQHPGSPLDPHVHQDLVETYATWARGLRDGGKPAEAVEVYRDLLREDASFRDEVADAYLRLARAAPPAGTDAVARARGSVDALLVVVREFGGTPAAAEVPAALDAVYGAAAAPLGRGEFCAAAPALEYFAGLTDPALAKAAADARAHFPRAVLECGLGQLREGRSDDAVTALERFVGTFPDHGDAARARSALISAKVAAGTGARVPVPAPLGAEGSIPVTFVNGVSAPVTVRVAGSTAHEFTLPGCGDCPPSFPPLGGSAACPSVDGLPARTVRLDPGEHHVLGEYGRADALAEPLGVGSGQPDLFCLYLERWS
>NZ_CP034550.1|WP_033431717.1|4734069_4734285_-|hypothetical-protein
MVDRYAQEPCCREAVDRLADEFKGLVPETVVTSTVLGARQDLEGQIQPGALAEMLHRLARYRLDSLVSAGA
>NZ_CP034550.1|WP_033431718.1|4734369_4734588_-|hypothetical-protein
MRSAAPALAVVPAAVLLVAAGCGVTAQDEPQPLVTSTVNPAPTPTLTQRPDPTTATASPTTTSPTAATSASG
>NZ_CP034550.1|WP_051766081.1|4734584_4735913_-|HAMP-domain-containing-histidine-kinase
MVLGVGSLLLTSVLALVVWNLASGYMLRQREQSAVRQAEVDVRLVDESLRAASDGLEELLTGLTAGPDTTILLFRPGQVLTSGRQVDPAVLPPKLLQLARDGVPAGQRLVVGGIPVYAVTLPIAHAEGVYVEMAPMVQLDRTFRFLSAVLVTGTVVSGLLGVALGSWASRRALRPLTALTDAASRIAGGDLRARLPEQTDPDLTPLATTFNTTADALEQRVLRDARFAGDVSHELRSPLTTMVNAAEVLRRRRGEIPGTAGRALDLLTSEVDRFARMVVDLLEITRADQQGDDSAPESIDLVALVTNVLAARPRGPVPLAADRPAPHVLGDRRRLDRVVNNLLDNAEHHAGGAVRVAVLRRGGWARLEVDDEGPGVPAGLRTRIFERFNRGERAGSRGAATGSGLGLALVAQHVQRHGGTVRVEERPGGGARFVVEIPEAAS
>NZ_CP034550.1|WP_033431720.1|4735951_4736629_-|response-regulator-transcription-factor
MDFSVLLVEDDEHIRQALGLALADEGFAVTDAVSGEDALALLDEVRPHVVLLDLMLPGVDGLQVCRTLRARGDLPIIIVTARTDAADVIAGLEAGADDYVTKPLVASVLAARIRALLRRTGRHDEVLRVGDLEVRPDAGSVHRDGTEVHLTRTEFRLLVELASAGGRVVTREQLLQRVWGYDYYGDTRLLDVHIRRLRRKVEHNPDDPKLVVTVRGSGYRLGGDG
>NZ_CP034550.1|WP_033431803.1|4736836_4737226_-|hypothetical-protein
MALALGDYVRAVADALGVPPEGTTHEVTDTVTAYVALSCRAPEHPDRDLMLVWTERRGWELSVETGPAERPIVLARRGGDVVPGPEAVARFVAESVAGGRSERAALPSPVDRVDRADLVERLERSARTR
>NZ_CP034550.1|WP_084716507.1|4738042_4738510_-|STAS-domain-containing-protein
MRVEEKLGCWFAHQPEEPRLSDICAYTVPETTVVTTDQWGIPSVAVIGEVDMACEADIRAALGAQLDRQPTGLVVDLTRVEFFGSTGIRLLVEVYTRAQEQGTALAVATGQRAVLRTLEMTLVDELFDVHPTVAHALTALRGAGFPVPRHSGTHL

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Crispr_ID: NZ_CP034550_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_12

5920122-5920572

Orphan

Consensus_repeat	Method
TCGGTGCNCCACGGGCTGCCNCC	CRT

8 spacers

The CRISPR arrays of NZ_CP034550_12

>merge|NZ_CP034550|12|5920122-5920572|CRT
GCCGCTCAGCCGCGGCGGCTCACCGGGGCGGACCACCGGTGGCCGCTCACCAGGGGCTGCCACCGCCCTCGCCGCCGCCGCCGTCGTCCTCCCGACCGGCGGCGATCACGTCGGTGCCCCACGGGCTGCCACCACCCGCGCCGCCCCCGCGGGTGGGAACCGCATCGGTGCCCCACGGGCTGCCACCACCCGCACCGCCCCCGCGGGTGGGAACCGCGTCGGTGCCCCACGGGCTGCCACCGCCCACGCCACTCTCGCGAGCGGCCATCGCATCGGTGCCCCACGGGCTGCCACCACCCGCACCGCCCCCGCGGGTGGGAACCGCGTCGGTGCCCCACGGGCTGCCACCGCCCACGCCACTCTCGCGAGCGGCCATCGCATCGGTGCCCCACGGGCTGCCGCCGCCCTCGCCGGAGCCGCCGGTGTCGTAGGTGCACCACGAGATGCCCGC

>NZ_CP034550|12|4|5920122-5920572|CRT
GCCGCTCAGCCGCGGCGGCTCAC	CGGGGCGGACCACCGGTG
GCCGCTCACCAGGGGCTGCCACC	GCCCTCGCCGCCGCCGCCGTCGTCCTCCCGACCGGCGGCGATCACG
TCGGTGCCCCACGGGCTGCCACC	ACCCGCGCCGCCCCCGCGGGTGGGAACCGCA
TCGGTGCCCCACGGGCTGCCACC	ACCCGCACCGCCCCCGCGGGTGGGAACCGCG
TCGGTGCCCCACGGGCTGCCACC	GCCCACGCCACTCTCGCGAGCGGCCATCGCA
TCGGTGCCCCACGGGCTGCCACC	ACCCGCACCGCCCCCGCGGGTGGGAACCGCG
TCGGTGCCCCACGGGCTGCCACC	GCCCACGCCACTCTCGCGAGCGGCCATCGCA
TCGGTGCCCCACGGGCTGCCGCC	GCCCTCGCCGGAGCCGCCGGTGTCG
TAGGTGCACCACGAGATGCCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033434286.1\|5910129_5911245_-\|S1-family-peptidase	unknown	unknown	gnl\|CDD\|365866
NZ_CP034550.1\|WP_153278374.1\|5927897_5928140_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434288.1\|5912195_5912642_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278369.1\|5911608_5911971_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766690.1\|5915998_5920012_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434284.1\|5907352_5908630_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP034550.1\|WP_051766691.1\|5920956_5922360_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP034550.1\|WP_033434297.1\|5928654_5929959_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP034550.1\|WP_033434298.1\|5930152_5930521_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226318
NZ_CP034550.1\|WP_153278371.1\|5922338_5922695_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434285.1\|5908983_5910051_+\|terpene-synthase	unknown	unknown	gnl\|CDD\|173835
NZ_CP034550.1\|WP_051766708.1\|5905647_5906412_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP034550.1\|WP_153278372.1\|5922775_5925556_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP034550.1\|WP_033434294.1\|5926060_5927101_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|236090
NZ_CP034550.1\|WP_033434289.1\|5912765_5915996_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434293.1\|5925707_5925908_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236995
NZ_CP034550.1\|WP_153278375.1\|5930673_5931051_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278373.1\|5927097_5927871_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP034550.1\|WP_033434283.1\|5906456_5907356_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP034550.1\|WP_051766689.1\|5903066_5905364_-\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|236731

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033434286.1\|5910129_5911245_-\|S1-family-peptidase	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	7.57986e-11
NZ_CP034550.1\|WP_033434298.1\|5930152_5930521_+\|hypothetical-protein	gnl\|CDD\|226318	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown].	2.57768e-20
NZ_CP034550.1\|WP_033434297.1\|5928654_5929959_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP034550.1\|WP_033434284.1\|5907352_5908630_-\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.19952e-41
NZ_CP034550.1\|WP_051766691.1\|5920956_5922360_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.60712e-69
NZ_CP034550.1\|WP_033434285.1\|5908983_5910051_+\|terpene-synthase	gnl\|CDD\|173835	cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in fungi, bacteria and Dictyostelium.	1.27544e-52
NZ_CP034550.1\|WP_153278373.1\|5927097_5927871_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.43152e-05
NZ_CP034550.1\|WP_153278372.1\|5922775_5925556_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	2.06312e-19
NZ_CP034550.1\|WP_033434294.1\|5926060_5927101_-\|transcriptional-regulator	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	6.80351e-08
NZ_CP034550.1\|WP_033434293.1\|5925707_5925908_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	4.42706e-09
NZ_CP034550.1\|WP_051766708.1\|5905647_5906412_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.78157e-62
NZ_CP034550.1\|WP_033434283.1\|5906456_5907356_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.73093e-78
NZ_CP034550.1\|WP_051766689.1\|5903066_5905364_-\|alpha-xylosidase	gnl\|CDD\|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0

>NZ_CP034550.1|WP_051766690.1|5915998_5920012_+|hypothetical-protein
MSKQTITWTVLPNGITPALDLVRFSVHVAPRLVPDTTPDTLAKFPDWVDWPARVLGAAFWLEFPDITDQATGRPLRVAARRSSTPESRRWSALFATTSRVDRHALTRFTRRRIRSYPTRHVRDFLDSRYGRFGALAPERFPTLDELTADDAFGPIGFESDSDRDGLGSDRKTLLVKRLEGGFNPGSQDPAQWALPFRPADATTPEGVARTFLQAERFHRRRDPVKGDLPPLSAPKLDFHQVVAMTREHHHLQRLLGLVLDFESTDPLLINLVRGNELVTRVRLVTDLKPLLGTADAVHVRPTMRCRVGKGTRDYAFTAIPLDTDSDLRDGLLRVGETDRFAVLQVDPDSAALAVRQFADTVTRLRVERGGRLRKRSASTPDEQALPVLRTAGFSVGRLSRASRLATKIERGRVVNDAAFTSGGDKITDDIALNADDVVRGYRWDVRDENAGQWFSLMWRDGAYVFVRSGNEEVKVLEETAAQTAPTTSGASGDEDLYLQESLVHWAGWSLAAPRPGKALAADNSLTDAEGKPDPDFPFLARFGPRALPRLRFGRRYRFRARVVDIAGNSLTSEQADAITDKAVNTPVETFRRFEPVAAPEVLLRSVPGEAESLEVLALRGNTGTDTAVGTADRHVLPPRTSVQVAEQHGMLDQSTTGRPVNAARYAELATRDAAVLEQHASARALPAPADRHWYYDTDQLPVPYLPEPLARRVLVRGLPGSTTSTTLTAVDQSTWPAAKGFRVRLQQGTPGWTWNESARLLTVRLRPGDSYRLQLSSQFDAADLDLMALWPLIQQAGTGVDLEAVRQSVVGGRHPMFTPARTLTLVHAVRTPLAVPDITAVTARRPGIGTTHAELGPSMVVSRKSSGSVEFTASWRMPVDDGTSDPTVVRDFRSAPITVPLEQAHGPQPDTETVQFQAKHEFGDTRFRQVRYEARAVTRFSEFFREHREVAFSGEQHTLGVPIDPAHLVVVDKDSRTQYQPGPRGADPAKAPGDYVVVDAANGTFRRTAGGSLTSPRTLEVSFVRPDTRSAPAVVEHEIRSSARPAAPRIRQVVPIFRWENPAPGQSVRRGGGLRVYLERPWWSSGDGEKLGVLLWPSTTTDAPEHVRGAVTMWGNDPAQHSTLVADDVLQQSFPLATSFGTGMAVPEFPTTELKVAAHDVAFDPERGLWYCDIQITRQGDTPLEGYFPFVRLALARFQPRSMAGLYLSSVVTADFAQLAPDRTAVVTGSGATRTVQVSGPGATNTQSGRLNEVRVTVEQQLAGVTDPVLRWQPTGATTTISTPTSSNGVLTWTGTVSLPTGTSPLRLVVEEFEAHRDGNGGIVATRLVHTDTVALG
>NZ_CP034550.1|WP_033434289.1|5912765_5915996_+|hypothetical-protein
MSENDLPPRDAPGRFVDRRRFLYLTGAGGLVLAVVPSGGPPGEERDLALTANATRTLHLRRREDSLNLRVDLFNADLVQTGGGAELRKVTTGSAYLVVHFPPQAVLERVLTDPLRLADLPLPTRVAGPSRLAFDITAALPMAATLDALLGWTGFTPRLAPTATSTQTASALVAPTDTQTALELPWRVLLSPNENGAWEHAVAPVTDNGWTELWHTRLGVRTGDGGVDDQAEGRSVRAVWLADPQMATWVQNPASVPSTDDIAHLLTPRQRFAVVRLSADPTLRTGLDPALPKPIDVAELTLSSLGATADLDGRWTYPVNSALQLKSWQHRAGLGRDQSVRVTTGGFLFPYGHRAALVEVAERRFERRPNPDGSPGPWYAPLRRTQFVVVQQPVRTYAGDTAMPHGQRKLPFTSVRVLTRITPPLAAPVEFGGTAQAANAFVPKAAAASDVPFTFHLRGTDHDGHEVDFTAPVVFVYETAAATAAKMQAIHDVYNTNPGGDAVAARTIDLDNVKIALAQRGSAYPVGSTTANAHRLVFNSEPATGSTAPLLAAGRAPFYPYLERVVLELPEVAALSGGAVAPTAFEYAAPYLTDGIHAPGKHTGGVYLTLHPAGAQPALDFSPAATGVVTPSGGIRGLSAKTGPITADPIDVAKELYNPEKMFGDPEKAKLLGGLPIKDLLPVPGSGVSNPDQAWKVNHRPLPEIDANEWTLVWTPKVEAGPKQATLFEPLPPPAGAPPIQHLTVIIVYTHSSRAGVESTQRMHGELRDFALHLFGKEGAGRAVTIQFDNLRYTSASGAKTSIDCRVRDVSFHGALKFVEELAELCSFLGSKLEITAGSNGVRAGLRFAVPAIPLGVFALSDLTLRASVAIPFDGSAVRVEFDLNTREKPFNLRVYWFTGGGYASIALGADGLERLEIGFTFGATLPLDVGIASGKVEAVGGVCYLLEKVRVVENGAEVVRQQVGLTAFLRLRGSLDFFGLVKISVEFYLGLTYQEKTDGSSVLVGEASVTVSIEVWLFSETFTVRTRRELAKTAAPAAGARAALAAAPEVPAHPFGAAFTQQDWTDYCAAFAPVGA
>NZ_CP034550.1|WP_033434288.1|5912195_5912642_+|hypothetical-protein
MRMSRLARLAVGLAVAAAALVVPATSAQAAPMTCSAWSSIDGMWMPWVQAIACLEYSGTSKRAQYWVTNNQSFGAVTLNKLEVATTAGGWPTQCLNAPMALQPGSTLHCESPWVTDTNAWADWAYGDLNFVNTSTPYADWSTKLSPAL
>NZ_CP034550.1|WP_153278369.1|5911608_5911971_-|hypothetical-protein
MNGLLRRAGKAAVAGALAVGAVAGAGAVANAAPPGSVVSPTPKTGMYCTLSTSTSVGFYHGDASCFNVSWPGNVAWSITVTCVGGSTATSGIVLSPPRNWASVSAGWCWNGVRDIAIREH
>NZ_CP034550.1|WP_033434286.1|5910129_5911245_-|S1-family-peptidase
MTKIGLAAALVVSGLAVAQPAQAAPLSPGLVASMRDAFGLTEQQVLTRLRQEATATRQEPSARAAAGASFGGSWFDQEEGVLVVGVTDDEAADRVRATGAEPRLVKRTAAELDRVKDRVDALSGAGQVPAEVTSWHPDAERGAVVVKVQEGRRTPAVEAFLDRARRLGPVEVDTEGVTAPVPFAAGTVGGDPYYTGNVRCSIGFSVHGGYVTAGHCGQAGAQVYGWDRSWQGQFAGSSFPGNDYAWVRTGGGWWNVPVVLGWGTVSDALVRGSWEAPVGTSVCRSGSTTRWHCGVIQSRNETIHYAQGDVHQMAGTSVCAEGGDSGGSFITGDQAQGVTSGGYGNCSSGGRTWFQPINEILSTYGLTLLTA
>NZ_CP034550.1|WP_033434285.1|5908983_5910051_+|terpene-synthase
MSLSSSRPAFHMPFTARTNPHLEGTREHVRHWAEQMGMFDEPYATTWPDQWSRRKFDEADFALWTAMTHPDAEPGELDLVTDWHVALWFVDDLFLPLFRQDNDRAAARAQVKRLLEFLPLDGLPRPHLVPGNPVERAFAHLWPRTAPPMTPAWRRRFVQDIDRFLHGVLWEIDHVDLGVSDPVEYVYARREFGGLPMTGTLMEHGLGEIPGNVHRMRPLQSALRAFADIISLHNDIVSYDREVAEGTIANNGVEVLRIALGCDLADASRLMNQLLTARVRTLDEVVGPDLERALRDDDVPEPVPTRLAGYLQALKDATAGSYAWHEATGRFGRRLSVPHGPTGLGTSAARLSLTL
>NZ_CP034550.1|WP_033434284.1|5907352_5908630_-|extracellular-solute-binding-protein
MRRLLAAATAVLLVVTGCGGSGDEAGDGKTLKLWHYEGPDSAMGVAWAAAIEEFKATHPGVEVRFEEKGFEQVQKTAPMVLNSADAPDVMEYNKGNATAGLLARQGLLTDLSAEVAQRGWDKELGAGIDTTARYDERGVMGSGKWYGVPNYAEYVTVYYNKTLFDRQGLAVPTTLDELTAAMAKFVAAGITPLAVGGAEYPAHQLFYQLALTEADRDWVDRYQRYTGEVDFHDNTWVHGAETFAKWLREGYLGKDSAGMKAEDMGQAFIRGEYPLMVTGSWWYGRVRAQVQGFEWGTFPWFGMTAGSSGNLWVVPKGAKNKELAYDFIDITMSQAVQDKLRDAGGVPVASGATPAADPRTEQLNADFRELTAGDRLAFYPDWPAPGFYDVQVSAVQKLITGDLGPHEVLTELGDYYRENRSGTDR
>NZ_CP034550.1|WP_033434283.1|5906456_5907356_-|sugar-ABC-transporter-permease
MIPPALRDRGSYLLFLLPGGLLLLAVVLVPFGMNVGISLTEWSGAGEPEWIGLDNYARLLSDGTFWASFRHNVGLVVAMAVLPTLAGLLIAAVLFDYIGRHFGMRAAAVLRACVYLPQVLPVAVAGIVWGWVLAPRDGALNELLRAVGFDALAGDWLGDPDLALWSVMGVLLWIQVGYPVVIFMAGMGRVDPSLHEAAELDGASWWGRFRNVTVPQLRPEVFVVLLTCTIAALKVFAPIYVLTRGGPGGATTVPSYYSFQNFFERTRVGYGAAVATVLTVLVLVLTAVFLRVQDRGARR
>NZ_CP034550.1|WP_051766708.1|5905647_5906412_-|carbohydrate-ABC-transporter-permease
MLVPFAIVALNAVKTPADYAANGPLAVPDPVSLDALIAFWQRVDFGRKLLNSVVISGSVAVLAVVVSVCNAYALGIGRVRGRLWILVVFLVANTLPQEALVYPLYFLTNQVGLYDTKTAVIVIFTAVQAAFGTYLLTSTLGEFPRELLEAARIDGAGKWQTLVRVVVPVSRPTLSVLFVFFFIWTWNEFFLPMVLLISNDNQTVPVALGVLQGQRMMDATTTGASALLGVLPAVVFFLVFQRALARGVTAGAVR
>NZ_CP034550.1|WP_051766689.1|5903066_5905364_-|alpha-xylosidase
MKFTDGYWLLRPGVQAAHPVQVHDVVVGEGEVVVHAPTHPVRHRGDTLKGPVVALRLSSPMPDVVGVTITHFAGGADNGPRFAVVADPGHEAKVVDDDAGVVLTAGTLSAHVHRGDRWRVDFTADGRRLTGSGAKGMGFMTADGAHHVREQLDLGVGDVVYGLGERFGPLVRNGQVVDVWNADGGTSSEQAYKNVPFYLTSGGYGVFVNHPGRVSFEVGSEAVSKVGFSVEDEELEYFVIYGPTPKEVLRKYTALTGRPALPPAWSFGLWLSTSFTTSYDEATVTRFVDGMAERDLPLSVFHFDCFWMREFHWCDFTWDPRTFPDPVGMLDRLRSRGLRVSLWINPYVAQRSPLFAEGAAAGYLLRRPTGEVWQWDLWQPGMALVDFTNPAAREWYAAKLDALLAQGVDCFKTDFGERVPTDVVYHDGSDPERMHNYYTYLYNRTVFEVLRRRRGPEEAVVFARSATVGSQRFPVHWGGDCESSYESMAESLRGGLSLGLSGFGFWSHDIGGFEGTPSAALFKRWTAFGLLSSHSRLHGSGSYRVPWLFDEEAVDVLRRFTKLKLGLMPYLDRAARQAVEAGVPMMRAMALEFPDDPACAYLERQYMLGDDLLVAPVFADDGEVSYYVPEGTWTHLLTGAEVTGPRWARDRCDFLTLPLLVRPDTVLPVGAVDDRPDYDHAEGVTLRAYRLADGDHVTVVGGTTFRTRRRGDRIEVGADTPPTHWRLLVVGAGSVDAVEGGRTRPHPDGVLVEAGGGAVTLTGVR
>NZ_CP034550.1|WP_051766691.1|5920956_5922360_-|PLP-dependent-aminotransferase-family-protein
MRIPEGLTIPIELDRTTRRPLQDQLAEQLAGAVDRGLLAGGCRLPSTRTLAERLHVSRGVALAAYEILYARGYLEGRRGSGSYVAARRSAPPDQCRPPAPAGEHVDCTPGQATGEGFPLAAWRAAWRHASFQPPPVRELPRGGLPELRRAVAGHLRRTRGLGCDEHQVLITSGLAHGLRLVLDALGGPGRVAVQDPAPPVLRQVVADSGRRAVALPVDRDGGWTGAVPPACTTAVVSPDGGPPFGAVVSALRRQQLADWARREEDHLVVEVVGVHVAPAAAPLPRLSNLAGVRTAVVGDFRTVFAPSLRVGYVLLHRDLLKALPPGAFGDEQPSHVAQSALAHLLTEGSVLRRLHQLERLFSRKDALVRAALAPLGPAVRLAPPGAAGTVVVHLPDRLDAECVHAELHRRGVLVPTLASFHLPGRPAGNALVLGHGHLPEQVLRGVLDELVDVLHVEHPAVERAIGL
>NZ_CP034550.1|WP_153278371.1|5922338_5922695_-|hypothetical-protein
MTDTAARLFLVECYLPGAQQDEVAAALRRVLAEGRGSTGFAGCLAIPVDDSYFCMLTGDAPDELELTFRRAGVPFERIVEATRVTPAPPVPPPTAPPVPHQGELPVPQQGERCAFRKV
>NZ_CP034550.1|WP_153278372.1|5922775_5925556_-|AAA-family-ATPase
MAGSDLVGRENELAAAADVLARAERCTARLVLSGEAGIGKSAVWERVLRDAAARGWAVLSCRPVESEARLAFGGLVDLLDRVPDDALTGLPEPQRAALEVALLRRRADDGAGGGAGDPRAVCLAALNVVRALAARTPVVLAVDDAQWLDEASARVLEYVLRRLAEERVAVVVAVRSDDDEQPPLGLAGQDDLAHLRLTGLSIGALHRLVRSAFGAPLPRPTLIRLQRTSGGNPFYALELARALARDGAATAPGLPLPAPRAFDELLADRLVALPAAARDALLYAAALAQPTVDLVRRAMPDPDEAEDALADAEDLGVVEVVAGAIRFTHPLLRSTAYSAAPAGRRRRAHRRLADVVADPETRALHLAFGAGAPDPGVAEALDGAALAARQRGAPETAARLWELAAGHATDPARGAALLVSAAQCLFFAGDAKRARDLFEAAVADLPDGPERVAALLELAVVVFYGDGPVEATALSDEALARAGDDPVLTATAYLRRSWFCQNDTALRYRNTRQALEAITGHEDAAPADLVACILVSSAYYRLLSGEGLATGDLCRAATLVSPTDQARDARMARSLLRVLTKYTDPVRGREEFARARRASLDRGDEAVAVHELVHLAELDVWLGDWDLAGREAAEAVDAAEQAGQRPWIAYALYTRALVDAHLGDDDAALRAAGEGLRIATELDDSWVTVHLMAVRGFVELSRQDPGAARAHLTAALEVCVTVGLADFPISSLYGDLVEVTAELGLVAEAEVLLAELERRRDRASRPWLAAVAARSAALVLMARGDLDGAHAALAVPTPLPMPFEQARTDLVRGRVLRRRKEKLAAREVLLAAKRVFDGLGAHHWSGRVDTELGRLGLRRGDEHDLTATELHIARLVAAGLSNREVAAAAYVSTKTVEAHLSRIYRKTGVTGRRELARLEFLRDPPD
>NZ_CP034550.1|WP_033434293.1|5925707_5925908_-|S1-RNA-binding-domain-containing-protein
MEHVLPDRDEVFVGTVVSNVPFGSFVEHPGGAHGLLHGETAEVGARVRVRVLEVDPARDRFSLGLA
>NZ_CP034550.1|WP_033434294.1|5926060_5927101_-|transcriptional-regulator
MRAGKPPGAANGYSLQARGVLDASTPQEFLALLDALRRTRKLSYAQIGAAVGKGMSRSTAQAMIKRETLPPLPQLRLFLRGCRVSAEETALWVNTWHHLNRTAPPEPPPAAGGSRRAGEWAAPPLTGRPIPDDGSPPPHRPAADGRPPASAGGGRPPASAGGGRSPATAGDRTPASPGGDRLSASAGGGRSSGSAGGGRVSASAGGGRPSPPAGSGGSPVPPGHPAGEPAAPRDEPGPVPGGARSGPWETTWVAEGLRPWPLVRALAALGALVGMLTGSAVAMWRAGVPAEVILAVYGVIAVGITSWAAVARHHRVESIRRRTPYEEDPGIFLDPMQKVAPPVIGR
>NZ_CP034550.1|WP_153278373.1|5927097_5927871_-|helix-turn-helix-domain-containing-protein
MSTERVGAGRRARPAPEDPQQQATVLSAWSPPSAALAGALAAGTPAGFRVALDALRREKGLTYARLERRARGVPGISRSSAHAMLTGQRDLTAHRVSALLHLCGVPAHERDQWLTGLARLQAPEPPASEEPVVYSSPPPPPPPEPVAAADDDRGADAVEPDPPRPRRGSGRDEVHGGLPRLLAALALAPAGAIALARWGVPVPVMLGCCTAAAVGIALWTVGRTAEVDRPHVRKVWLDSAPFPEPPRAARPVIGDDR
>NZ_CP034550.1|WP_153278374.1|5927897_5928140_-|hypothetical-protein
MIVSLSGGEPRAAVCLPLPAVLVRAAVFVFVFVFVLVLLRRGYDVPTSLGLVSGLVVVAVWAGYGVSRPQRALPLVHLAR
>NZ_CP034550.1|WP_033434297.1|5928654_5929959_-|M20/M25/M40-family-metallo-hydrolase
MRRAQDEVVTLASELIRIDTTNTGDPATVVGERAAAEWVAEKLAEVGYETTYVESGAPGRGNVVVRLAGADPARGALLVHGHLDVVPADASEWSVHPFSGAVQDDYVWGRGAVDMKDMCAMALAVARRFKRDGIVPPRDIVFAFLADEEAGGLYGAKWLVDNRPELFEGVTEAISEVGGFSITLKDDVRAYLVETAEKGIRWLKLRVRGTAGHGSMIHHDNAVAKLAAAVTKLGQHRFPVVLTPSVREFLAGVSEITGLEFPEDDVEGSIGKLGGLSRMIGATLRDTANPTMLSAGYKANVIPSVAEATVDCRILPGREEAFDREVAELLGPEVEREWLGLPPVETTFDGALVDAMVASISAEDPGAKVLPYMLSGGTDAKSFQQLGIRNFGFAPLRLPADLDFSALFHGVDERVPVEALKFGVRVLDRFLRNS
>NZ_CP034550.1|WP_033434298.1|5930152_5930521_+|hypothetical-protein
MRFLLMHRLDESRPEAWNPSPEFVEKIGAMIQDWTERGVLITAEGVHPSARGARVRKNSGKAATATDGPFTEAKEVIGGFALINAANREEAVALASSYAELFDEVEVEVRQVVEFDELPPGA
>NZ_CP034550.1|WP_153278375.1|5930673_5931051_+|hypothetical-protein
MGGGVGLDPSPQVVRPPGAGGPAHPGEADAAQVRPAQVGAGHVAHRVQDAVERRGHRLELGERRVLGGEVVVLGEVDQKGLALDVEHHAEVADLRHLDLGAGGEARGRRTGGELVGEPRERPDAA

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Crispr_ID: NZ_CP034550_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_13

6256484-6256567

Orphan

Consensus_repeat	Method
CCCGCGCAGGCGGGGATGGTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_13

>merge|NZ_CP034550|13|6256484-6256567|CRISPRCasFinder
CCCGCGCAGGCGGGGATGGTCCCTCCAGCTCGATCCGGCTGCTGGCGCCGGTTCCGTGCTTCCCGCGCAGGCAGGGATGGTCCC

>NZ_CP034550|13|11|6256484-6256567|CRISPRCasFinder
CCCGCGCAGGCGGGGATGGTCCC	TCCAGCTCGATCCGGCTGCTGGCGCCGGTTCCGTGCTT
CCCGCGCAGGCAGGGATGGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033435426.1\|6252958_6254884_+\|tetratricopeptide-repeat-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033435424.1\|6256654_6257338_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
NZ_CP034550.1\|WP_153278432.1\|6249057_6250347_-\|tetratricopeptide-repeat-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766960.1\|6255951_6256320_+\|transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP034550.1\|WP_051767101.1\|6242352_6243210_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278431.1\|6248158_6248985_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP034550.1\|WP_153278430.1\|6247036_6247633_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP034550.1\|WP_084717227.1\|6244080_6246798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377369
NZ_CP034550.1\|WP_033435418.1\|6266340_6267120_+\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP034550.1\|WP_153278434.1\|6260738_6262463_+\|endonuclease/exonuclease/phosphatase	unknown	unknown	gnl\|CDD\|225249
NZ_CP034550.1\|WP_153278429.1\|6240106_6242230_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP034550.1\|WP_153278436.1\|6265195_6266191_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766957.1\|6267187_6268558_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP034550.1\|WP_033436072.1\|6247557_6248097_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379282
NZ_CP034550.1\|WP_153278435.1\|6263613_6263883_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033435421.1\|6262528_6263476_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278433.1\|6257818_6259501_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377373
NZ_CP034550.1\|WP_051766961.1\|6250451_6252059_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|99707
NZ_CP034550.1\|WP_084717139.1\|6268738_6269308_+\|DUF4254-domain-containing-protein	unknown	unknown	gnl\|CDD\|379447
NZ_CP034550.1\|WP_033435422.1\|6259497_6260616_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033436072.1\|6247557_6248097_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|379282	pfam13592, HTH_33, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	1.00606e-14
NZ_CP034550.1\|WP_033435424.1\|6256654_6257338_-\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	1.69749e-16
NZ_CP034550.1\|WP_051766960.1\|6255951_6256320_+\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.58524e-05
NZ_CP034550.1\|WP_084717227.1\|6244080_6246798_-\|hypothetical-protein	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	3.12933e-10
NZ_CP034550.1\|WP_153278431.1\|6248158_6248985_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.61639e-23
NZ_CP034550.1\|WP_153278430.1\|6247036_6247633_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.05149e-22
NZ_CP034550.1\|WP_033435418.1\|6266340_6267120_+\|IS5/IS1182-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.25014e-24
NZ_CP034550.1\|WP_153278429.1\|6240106_6242230_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.74199e-10
NZ_CP034550.1\|WP_051766957.1\|6267187_6268558_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.10646e-05
NZ_CP034550.1\|WP_153278433.1\|6257818_6259501_+\|hypothetical-protein	gnl\|CDD\|377373	pfam04476, 4HFCP_synth, 4-HFC-P synthase. (5-formylfuran-3-yl)methyl phosphate synthase, also known as 4-HFC-P synthase, is involved in the production of methanofuran. This family has a classical TIM-barrel structure whose biological unit is a homohexamer.	1.40193e-11
NZ_CP034550.1\|WP_051766961.1\|6250451_6252059_-\|ATP-binding-protein	gnl\|CDD\|99707	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.	0.00193184
NZ_CP034550.1\|WP_084717139.1\|6268738_6269308_+\|DUF4254-domain-containing-protein	gnl\|CDD\|379447	pfam14063, DUF4254, Protein of unknown function (DUF4254). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 195 and 207 amino acids in length.	2.74113e-08
NZ_CP034550.1\|WP_153278434.1\|6260738_6262463_+\|endonuclease/exonuclease/phosphatase	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	5.86099e-50

>NZ_CP034550.1|WP_051766960.1|6255951_6256320_+|transposase
MAAGGNTAAALDAWVVFEDEAGMSMTPPTSRTWAPRGRTPVIRVRAGSRRQLSVAALACYKPGERSRLIHRPRLDKAGGCHSFAWTDYRDLLTAAHHQLDGPIVLVWDNLPCATRRYGIEWG
>NZ_CP034550.1|WP_033435426.1|6252958_6254884_+|tetratricopeptide-repeat-protein
MVNEFSGTAHGPVVQAGRIDHLSVHYRPPATHLRQLPPAVELVGRDTELAELRSLADTATTAIGVGGPRWAGRSALAVAFAHEIADRYPDGQLYLDLRGNRHNPLSQEEALRWALRSSGLAAEDVPDDPSHLVSAYRSALADRQVLVVLDNVVDETTVDVFTRPAGLVLATGRGAPLFPRGVAKLHVRPLALPDAIALLRREADSDICWYGDSAERLARLCGGLPLPLIAVADYLRRTAYSPRGLADLLADGRVPLSSLSANGVSLGDSLAVSYRRLPEEARPALRRLGVFPGATVNDRAVQAVIGDRAPDAVKRALIAEGLLVEHWRGGTTELPAPFRSLGREWLTDADGPADQVLDRILDHYVDAAESARTAWLGEHPPGTDGRLSEMVRRTSRGFFLGEAENLRSLVESAATRRLDAAVGLALPLLEYLTRQDEDLQAVHEPLLRAITDLSGDHRNAFALLVRLNETYSRMSRPAEAADCLIEAQRLARAAHDDELETRATRLLLTAFETKLALARESGDRESIANSLVLVASAHHDLDNPRFARQLLLEALDFYRTTDDVPEIADVLAELGDVSREAGHLAESAQFLRESVRLFEQIEDTEGLALALGSLSDTLTDLGLHDEAAALARSDELIDLDE
>NZ_CP034550.1|WP_051766961.1|6250451_6252059_-|ATP-binding-protein
MAEPEVVNDVRAASIGSVVQAGVIHGGVHHYSSDVAPRYRLDVVRPVDRESLADLPPSHLLAAHRRVVEFTGRDAELAELRQWRDDRRERAILLVHGPGGQGKTRLATRFAEECAQSGWPVRVASHVGDGHLADRGWEEVGTGALVVVDYAERWPVDDLLALATHLGAVPVRLLLVARSAGWWAAVRHGFADRGFATGQLRLGPLASGASDRETLFDRARDRFAEVLGVPDAYRGPRPASLAEDSFALVLSVHMAALVAVDAHRRGVRAPEEPSKLSAYLLDRERAYWDRLHRAGRSAIRPATMARAVFTAILTRALPYRDAAAVLGELGVPSPSEPVDHVLEDHARCYPAADPDTVLEPLYPDRLAEDFLALMMPGHDVAGHEPDAWASAVPKLLVTKDPPVPTEALRSATTTLIEAARRWPHLVERQVAPLLRAHPHVALAGGDVLSALAELDGLDPTVLNAVEAVLPEERHIDLDTGIADLTSRLTRHRVAAGAARPPTPRCWSPRATGPGTRAGTRRRWRRSMKVCASDAC
>NZ_CP034550.1|WP_153278432.1|6249057_6250347_-|tetratricopeptide-repeat-protein
MDEAIAILRRTSVDDGDTFHSNLPNLAAMLDRRATCLSLLGRDVEALATSEEVMRLVRDAHSIEEHVVATYLHNLAVQLSMLERHEEAMVANEEVVGVRRVLVAARPEVHRADLALSLNNLAGNLSRLKRHEQAQAAALEAVARYRDLVDINPASFLPQLVRALHTLGSVLAGAERYTEAFAANSEAVMLRRRLVEDDAAAHEPGLAKSLDSLAADLLDLGQPTEAMLAAAEAVVVQRRLVDRIPDAHRRGLAHALYRLSSTLAKAERYADALDPAREAVEVYRVLAEHDPGTFRAELASAHNALANRLAKLDLWSASVVESQTAVELLRACPLGSVAARDQLAATLGNLAVALLQLERIAEALTAAEEAVRISRDLVEQDLVRFRPQLVRPLKALGIALVKAGALPRGLVCLDEAMSLERSVYKESPD
>NZ_CP034550.1|WP_153278431.1|6248158_6248985_-|IS5-family-transposase
MARRRPWEVEDELWELIEPLLPKVERRFRYPGRRRLDDRKVLCGILFVLYTGIRWEFLPQELGYGSGMTCWRRLRDWTEAGVWPRLHELLLAKLQAAGALDWSRAAVDSSSIRAVKGGPKTGPSPVDRARTGSKHHLITDGGGVPLAVTLTGANRNDVTQLLPLLDAVPPVRGRRGRPRRRPDRVYADRGYDHDTYRRQVRAKGVRPFIARRGVEHGSGLGVHRWVVEQALALLHWFRRLRIRWEVRDDIHEAFLSLACSIICWRRLQRHQSLRY
>NZ_CP034550.1|WP_033436072.1|6247557_6248097_-|winged-helix-turn-helix-domain-containing-protein
MRYAQGGGLTDERREFRERLRLQAAERFADGEANAVIAKDLRVTVRSVQRWRRSWVAGGSRALASAGPASSPRLDEAKFAQLERELHKGPMAHGWPDQIWTLSRLKTVIGRRFHLAYTVQGVHLLLRRHGWTRQVPVRRAVERDDQAVAGWVKDTWPQVEAPRRRSTPGSSSRTRPGCR
>NZ_CP034550.1|WP_153278430.1|6247036_6247633_-|IS630-family-transposase
MAAGGSTAAALDAWVVFEDEAGMSMTPPTSRTWAPRGRTPVIRVRAGARRRMSVAALACYKPGERSRLIYRPRLDGVGGRRSFAWTDYRDLLVAAHHQLGGPIVLVWDNLPTHRSEDMLSFIDSTDWLTAYRLPSYAPDLNPVEGIWSVLRRRWLSNVAFTTVDHLVRTVRQGLRKIQYRNDLIDGCLIGTGLRLHPT
>NZ_CP034550.1|WP_084717227.1|6244080_6246798_-|hypothetical-protein
MVDQITVDTAAVVVLAEGTSTSEISNKRGHLFEKFIAKLLATQGYSDPHPENLNPTSEGIELDVRARNIVTGEQLICECKAYSSNVRVPPLMTFIGKFSLAQAKDKQTKGLFIALPRLTPEAKEQAELAEATFPGFRYLGSYEICELLQAADVLPRWEDGPEIRSDPTVVITEHGVVLAACELDSDTRGGSRWVTWARNKDVPLPIVRLIEKNLSKGLPVVRAGHEAGAVPIHVPSLPKIVEVQGSTSDFEYQLPAAPEFFIGRKTLAQSLLEKMKGRLTAGSVVINAKSGWGKSSLVLHLQKEVEKVGGVGMVFDSRTAERSDFVAAAMERTIRKAVEREVIELPSQTAFSSLQSIVETLKRATWASPARPIFLAFDQFENVFRNTDLTREFRDLTYLIREISAPLTISFSWKTDVVAWTEGYPFGLRNDIRDASSVFDLDPFGPREIEALLRRLEKSLGSKLNRELRQRLREYNSQGLPWLFKKFGAHIIAEVARGIKQDDLAKQALNARGLFESDLARLNPSEQSLLRTIAQAAPVVLSDLDYDATTSTVLDSLLHQRLVVQVGHTIDVYWDTFRDYLNNGSVAIEDSYVVRYAPLGAGRLLRVVVAEGGSISVPDAATRLDTTPTVIFNYSRELRQFGVLTSESNRVTLEADLMNSSDKEEAIRARVSQALRRHKMYKLAADMIAREGTVSIHQFASTLSGEFRAVSAKSDSWVTYARSFCQWMEYAGLVRLLSNGMERPSENDSEPLGRLLSGSVPVRVRSPFPNANPGPALQLLMHLFDPTGHARPSRNGFATGVRDLTTLGLVETDDGERITLSDSTVFSHGAIEPKRLRAIVERQRGISEAFAALEANPGLSPLSLGIAHRDTLGAEWAESTTLSAGKYIRAWARACGISTQLRSTT
>NZ_CP034550.1|WP_051767101.1|6242352_6243210_-|hypothetical-protein
MAGTGRHDAVHRTMVLVDVEGFGVLDRTLRHQQGTRAGLYEVVGQALAAAGVPWDACYHEDRGDSVVVLVPPEFPKAPLVEVLPEALVRAVRGHNTTSPGAARVRLRLAVHAGEVAFDGHGVTSTALTDAFRLLDAPALKTALKNSPGVVAMIVSDLIHRDVVRHCATLDPGLFRRVEVEVKQFHDTAWIALPDQPHPPAAPGLPGHPLDPTTPTTPPDVRPATGTDRDRASDGGTGTRGVHIAGGVHGAGAGITIGAATGDHVTIGHSSPPPGPSAGPPPQDPR
>NZ_CP034550.1|WP_153278429.1|6240106_6242230_-|tetratricopeptide-repeat-protein
MHGGVTADTGGTAVGNLTGGLHVHPPPPRPPTPAPRQLGPPPAGFVGRADQLAALDRALTGSPVGHDIGGVGGTAVISAIGGTGGIGKTWLAQTWAHRNLHRFPDGHLAVDLRGFSPGDPRHPVDVLGDFLAALGVDRDRQPPDLDARVGLYRTHTTGRRLLVLLDNAATAEQVQPLLPGGATCTVLITSRKRLRGLVARHGARPVHLDVLTDTEARALLTTALGDTPTTPDTHAAVTELISLCGGFPLALGLIAARIRTHPDLLDDLVADLRELGLDALDSDDPEASLPTVLSWSLRHLTEQQRTLFALLGIAPGPDTTLPAVVALTGLSETDARRALAVLEEASLLERRPGGRYAMHDLVRAYAATTAHHLPDHMCEAALTRVVDFHLHTTHTADRLLDPHRPLLPPDPPAPDVRPHPLPDAVTALAWLDAEHATLLAAQRAAVTLGRHHVVWNFAWNLDTFLRRRGHRHDQFAMWQAALDAAEHLSDPTTLIRGHRLFGRACSRLGLHEQATEHLEQALNLAVQHHDSTEQAHAHHQLALAWERTGDDRRALNHARHALDLHRSLDQPAREAHALNAVGWYAARLGEYDSARIHCHAALTLHRHHHNPAGEAQTLDSLGYIAHHVGDHQQAVDHYEEAMIIFRTLAYTYLAAEVFDHAGHSYVALGQHERARAVWREALKLYRDQGRTADAQRVQRQLDDLDDT
>NZ_CP034550.1|WP_033435424.1|6256654_6257338_-|HNH-endonuclease
MKRFSGTVAVVVAACVAVTPVQAQAASDPAAAARTVPLRDAVEALPVADEIRDGYERTKFKHWIDADQDGCSTRAEVLLDEAVTPPEVTGTCTIAGGTWYSYYDDVTVTEARGLDIDHMVPLAEAWDSGAFDWTAQRRRDYANDLGESRALVAVTARSNRSKADQDPAQWMPPHPPARCTYITDWVTVKTRWGLHVDTIEQTTLRNHAADCPNVPITTTPARVTTPS
>NZ_CP034550.1|WP_153278433.1|6257818_6259501_+|hypothetical-protein
MMLPWQVIRSKAGLPPVVGAGVPRGISEHEGMAGPMSSWNRRWRLLASGRGSDSDGGVCSAMVDARQDDARDRRHNRKLLVSVFDPQEAREAVLGGARIVDSEDPRSALGNIKPQAIMDISDAVLNYTRDQEVQLSTNIGEDQLLFRRTDSGHAVEKSPYEIAGKASQAALGVAVSMGTRVHPCNIIKVGLDGMHLPVLGDVLTEVVRTLNRTEQFSHSQVMSVLFAQDLALWRERRDNPLVVRELVALREFSPVTAASPVEGTIDLLDYYQYLTGPDGGPLFPERPDLEQLIEAGVLPEWSDTTRVKINEPFPHSEFGITPAERTDREAIKNMVDATAAAGADGIMLDTSILFKVARVGLVDTTEPTGGDGPSMVDFNRFDVTGTGPDALVRAGILSVEDIRFFVDYCHYRGVEANLAGSLQSHQAQQLWRLVPEIDQVSTRGGGSAILLDPSRPPAQDDPVASRRDQVMMRQLVRGLVPPEQGGYLWLPEKMRSVDGVDEAVARLRQSFPDIGSVFWADPYGRLTPVQPRVPESGTLTAVLRQADLGDGDRPVEVAAP
>NZ_CP034550.1|WP_033435422.1|6259497_6260616_+|hypothetical-protein
MTDTATPAPLLLTLEGTPDTETGYPVPERPIMKFAWHTGAWFDVFELHTALIKSDLARAQAEGRVVVYLSCPISSRGGGYFATNVDIAHHTARRLTEQWGERFFFLNPAAYQLESRQGTGLITRHIAALQDKYPGLTLEQLLAQAPPTGGDYMRMWSRVLIEDDYLADPARRDLKLGGAFDAYYFLGPTDAREFFSLRSGGESLTDRMEGYFARRYTTDPQFYLDFGTVDDGAGGRRPLDPSRPQDAVVYEARRRKFLVYYGTRVSTAFSLGAHDEWNIHHRLNQARRADPAYGVGEEMAGFFDGRQFSLAETEQETLPGYEVLDAGARARSALDGATAPVLPQAEVAWPYGTLSELVLPREPLDSTAQATR
>NZ_CP034550.1|WP_153278434.1|6260738_6262463_+|endonuclease/exonuclease/phosphatase
MHDVQGAGHRSPLAGQRVTVARGVVVAADARRGVFWLHSVTPDPDPATSEAVQVAVDVPVPHAGDLVRVSGVVQEHRDGGDTPTNANLSVTRIGAPAAVAVVGRHPVPAPVPLGRSGRIPPREVVKDDVVGDVEHSAAFDPDTQGLDFYESLEGMPVRVDEPVAVSPALEFSGGRRVTVVADAGADATTLSGRGALPAREHDPNPERLGLVTGPVPDAIPAGIDVGDRLSPVCGVLDYRYGAYEIVATCSSTRHPAGLVRETARPTGADELAIATFNVENLSAVSPAEKVAEIARTITTHLASPAVVVVEEVQDDDGPADTGVTTAGRTWQSLVDAIAAAGGPRYDFRQIDPLDGTDGGVPGGNIRVGFLFRTDIGLSFVDRPGGTATTPVHVAPDGTLTISPGRLQPDHPAFTDTRKSLAGEFTFRGTRLVVVANHLSSQRGDDPTFGRFQPPRTPSRVPRGEQTAVLGEFARELLDSDPHARLVLAGDFNDTEFSPPLRTLHNLGLTDLPATLPEGERYTYIYQGNAQVLDHILLSPHLAANGYDYDIVHVNAEFADQVSDHDPQLVRLTFP
>NZ_CP034550.1|WP_033435421.1|6262528_6263476_+|hypothetical-protein
MTDELVLPTTGTRVPPLPRARMNAEVEAAYELSIATWGIPSNLFRTMAHHPALAITEVPYANSVIFDAGVLTDIPNPDTDQGGTVRYPTSGFLDRVTKELVINVVSLLNRSRYSITHHTVIGYNTLSELLPDPDPDTRAQLAEAMLLHLVDDQGTPTFDRPGAPPYTDLHLACLRLAAATQANPHGITDDQVRDTHRTLLDHAPAAITAHGLDQYPGTDTPAYHNAYATGMLVELTWLTVHFSGLLNVWFTVLHTFDEASVTDDEIDFITVYNTTVPATIRRRNNALLGPTGWGDHPLNGTGPQSAVSSVEALTP
>NZ_CP034550.1|WP_153278435.1|6263613_6263883_-|hypothetical-protein
MRARDQRRWTRQELAEALAGHGVISSRPAAKYRRTRRHPLTVAALEHYEVGESLDIARVVQLCTVLDLEPDMVLDEALTTAQHHVRFPW
>NZ_CP034550.1|WP_153278436.1|6265195_6266191_+|hypothetical-protein
MPGDASGQPDRLMISEYSTGQEARMRSAEPSSDDRPSRKSLPDQQYPYGGAHPATTDHQGDPYVPGGVMLKGICRAATALIMSVVVILPISARPARAAIDWTTVVAAGINALSAYLTSSNTAEAIRQATTQILAAVNGAKTDILAGIETIAVAEARACANHAVIEFIDIERMTPDNMQRFAQDATWCTVSIISLLPAVTGKARIDQLGFALNVVGPIALNARARTGLTTSALEASLHGAENTLVSAITTDYCYITSSDIDPELPTPRDGDPIDWDIWCDAYYAYLGLGYNYVLNLPWPTLPSDADMAVAENMALRNTSRAIAISVLPLFRY
>NZ_CP034550.1|WP_033435418.1|6266340_6267120_+|IS5/IS1182-family-transposase
MLFYRAALPLSHRTLSFVSGLVRAHRRRSGSVWRRLDPRQQALLVLVYLRKGETFAETGAGFGVSTATAWRYVNETVELLASRAPTLRQALRSAKRRGTAYVVIDDTLIPIDRVAADRPFYSGEHRMHGVNPQVIASPDGTILWVSGQLPGSTHDTAAARIRHILAALREAGLIAVGDKGYHGYDDTGDHVITPYKGRNKPESQKEANRAHARLRGPGERANAQLKTWRVLRKLRCCPYRAGRLAKAIHVLQNHEVAAG
>NZ_CP034550.1|WP_051766957.1|6267187_6268558_-|helix-turn-helix-transcriptional-regulator
MNVGSGDDRPIDPVVWHDHEMRAALAQRDIGRVYRLLRRVGVSQRQIAAGTGQGQSEISAIVNGRQVQAYDVLERIADGLGIPRGYMGLAYTGEAVQAMAVSSGPQRTKDDFMLERRGFLGLISKIVMGAALTQPELDLLTVGTTATPVPERLSATDVVQVRALTAALRSYDAAHGGGSCRNAILAHTHWAQSLLNASATDDVRTRLLSAIAEAKTLAGWTAHDLGLQGDARRWLGQAVRDTQDAGDAAHTAIVLYHLGRVPLDNDDPAEALKLFQLGQIAAQDSHSSVAVSLLLTHEALAYAHLGDTRQAMTALRRAEDEYAHATDDQHQEFLRFFDHAALQTSAARIHSHLGLTDAAHRATAMQRLQRALDEAPADRIRQRAFNLAWLATCALAEGDLSAGGELGVRALDAVRAVQSTRLLDHLKPLEEEAGRHTSASDVQQLHHEIQLLRSAA
>NZ_CP034550.1|WP_084717139.1|6268738_6269308_+|DUF4254-domain-containing-protein
MTLHPEVDAVVTATLHPNDALLLPTGHDILRSFGAEHPTDDHPVLVVVTVPARRHRERAEALQTAHETQAGDAVLATSARVLMDCAQARATLIGQIDRWAAETVSEPSTAALLHTETLGRLVDRMATTWACWQQLHAGMPASRRVPVGHPTQAAMDEVAALSNAYDDLPVDLRSGRRRLPTTAPVIADL

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Crispr_ID: NZ_CP034550_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_14

7526065-7526154

Orphan

Consensus_repeat	Method
TGAGTGATTGACCAATCACACTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_14

>merge|NZ_CP034550|14|7526065-7526154|CRISPRCasFinder
TGAGTGATTGACCAATCACACTTGTTGACAAGGCAGAACCAAGCCTGTTTACTTCACCCCAGAGAGTGAGTGATTGACCAATCACAGTTG

>NZ_CP034550|14|12|7526065-7526154|CRISPRCasFinder
TGAGTGATTGACCAATCACACTTG	TTGACAAGGCAGAACCAAGCCTGTTTACTTCACCCCAGAGAG
TGAGTGATTGACCAATCACAGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_153278579.1\|7520611_7521619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278580.1\|7531971_7533135_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235010
NZ_CP034550.1\|WP_051764982.1\|7530712_7531975_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP034550.1\|WP_033429242.1\|7527231_7527711_-\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|215160
NZ_CP034550.1\|WP_033429243.1\|7526163_7527189_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176234
NZ_CP034550.1\|WP_033429245.1\|7523465_7524236_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270256
NZ_CP034550.1\|WP_033429237.1\|7536152_7536929_-\|inositol-monophosphatase-family-protein	unknown	unknown	gnl\|CDD\|238819
NZ_CP034550.1\|WP_033429244.1\|7524232_7525021_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273993
NZ_CP034550.1\|WP_033429248.1\|7522124_7522346_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716156.1\|7538244_7539285_-\|peptide-synthase	unknown	unknown	gnl\|CDD\|165707
NZ_CP034550.1\|WP_033429254.1\|7518069_7518474_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278577.1\|7518818_7519166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033429240.1\|7533897_7535337_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143411
NZ_CP034550.1\|WP_033429238.1\|7535649_7536108_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP034550.1\|WP_033429247.1\|7522454_7522934_-\|DUF4383-domain-containing-protein	unknown	unknown	gnl\|CDD\|379556
NZ_CP034550.1\|WP_153278578.1\|7519250_7520639_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372888
NZ_CP034550.1\|WP_033429341.1\|7528101_7529829_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|215160
NZ_CP034550.1\|WP_033429236.1\|7536983_7538147_-\|phosphoserine-transaminase	unknown	unknown	gnl\|CDD\|235103
NZ_CP034550.1\|WP_153278576.1\|7518513_7518759_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033429246.1\|7523063_7523462_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|133390

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033429240.1\|7533897_7535337_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143411	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.	0
NZ_CP034550.1\|WP_051764982.1\|7530712_7531975_-\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.73928e-36
NZ_CP034550.1\|WP_033429242.1\|7527231_7527711_-\|arginine--tRNA-ligase	gnl\|CDD\|215160	PLN02286, PLN02286, arginine-tRNA ligase.	4.0138e-44
NZ_CP034550.1\|WP_033429243.1\|7526163_7527189_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176234	cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.33828e-134
NZ_CP034550.1\|WP_033429245.1\|7523465_7524236_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270256	cd13538, PBP2_ModA_like_1, Substrate binding domain of putative molybdate-binding protein;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. Molybdate transport system is comprised of a periplasmic binding protein, an integral membrane protein, and an energizer protein. These three proteins are coded by modA, modB, and modC genes, respectively. ModA proteins serve as initial receptors in the ABC transport of molybdate mostly in eubacteria and archaea. After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.73587e-76
NZ_CP034550.1\|WP_033429237.1\|7536152_7536929_-\|inositol-monophosphatase-family-protein	gnl\|CDD\|238819	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates.	6.31024e-89
NZ_CP034550.1\|WP_033429244.1\|7524232_7525021_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|273993	TIGR02141, modB_ABC, molybdate ABC transporter, permease protein. This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions].	3.63688e-74
NZ_CP034550.1\|WP_033429341.1\|7528101_7529829_+\|arginine--tRNA-ligase	gnl\|CDD\|215160	PLN02286, PLN02286, arginine-tRNA ligase.	0
NZ_CP034550.1\|WP_033429238.1\|7535649_7536108_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	7.89904e-38
NZ_CP034550.1\|WP_033429247.1\|7522454_7522934_-\|DUF4383-domain-containing-protein	gnl\|CDD\|379556	pfam14325, DUF4383, Domain of unknown function (DUF4383). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 137 and 164 amino acids in length.	5.36693e-39
NZ_CP034550.1\|WP_153278578.1\|7519250_7520639_-\|hypothetical-protein	gnl\|CDD\|372888	pfam14040, DNase_NucA_NucB, Deoxyribonuclease NucA/NucB. Members of this family act as deoxyribonucleases.	4.15159e-08
NZ_CP034550.1\|WP_084716156.1\|7538244_7539285_-\|peptide-synthase	gnl\|CDD\|165707	PLN00139, PLN00139, hypothetical protein; Provisional.	6.65623e-21
NZ_CP034550.1\|WP_033429236.1\|7536983_7538147_-\|phosphoserine-transaminase	gnl\|CDD\|235103	PRK03080, PRK03080, phosphoserine transaminase.	0
NZ_CP034550.1\|WP_153278580.1\|7531971_7533135_-\|hypothetical-protein	gnl\|CDD\|235010	PRK02186, PRK02186, argininosuccinate lyase; Provisional.	2.88375e-10
NZ_CP034550.1\|WP_033429246.1\|7523063_7523462_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|133390	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins. Proteins in this family mostly have a truncated helix-turn-helix (HTH) MerR-like domain. They lack a portion of the C-terminal region, called Wing 2 and the long dimerization helix that is typically present in MerR-like proteins. These truncated domains are found in response regulator receiver (REC) domain proteins (i.e., CheY), cytosine-C5 specific DNA methylases, IS607 transposase-like proteins, and RacA, a bacterial protein that anchors chromosomes to cell poles.	1.40477e-11

>NZ_CP034550.1|WP_033429244.1|7524232_7525021_+|molybdate-ABC-transporter-permease-subunit
MTRGRLPLVLLLPAVLGLAFLLVPLVGLLVRTPWAALPERLFSASVGEALRLSLVCASLATVLCVVLGVPLAWVLARGDVPGRGLLRALVTVPLVLPPVVGGVALLFVLGRRGLVGQYLDAWFGVSLPFTPAGVVLAEAFVAMPFLVISVEGALRAADPRYEEAAATLGASRWLAFRRVTLPSVLPGVVAGTVLCWARALGEFGATITFAGNFPGETTTMPLAVYLALETDPDAALVLSAVLLVVSVAVLAALRDRWVSGPS
>NZ_CP034550.1|WP_033429245.1|7523465_7524236_+|molybdate-ABC-transporter-substrate-binding-protein
MRRTLAVLSLLALTACGTESADSAENTDSGGNGGSAEQTVIVFAAASLTEAFTELGAEFEAANPGTDVTFNFGGSSALAQQIGQGAPADVFAAASPAAMAQVPDAPSPEVFARNRLRIAVPGGNPGRITGLADFARDDAVIALCAEQVPCGAAAKAVFAAAGITPRPDTLEQDVKAALTKVRLGEVDAALVYRTDVLAAGDEVEGLDFPEADRAVNDYPIAALTGAPNPTGARAFVEHVRSGRGRAVLAEAGFDLP
>NZ_CP034550.1|WP_033429246.1|7523063_7523462_+|helix-turn-helix-domain-containing-protein
MPNLRISEAAALLGVSDDTVRRWIEQGRLTEVQLDSGRKGVDGRELAELAQRLAEAPEPGATVAASARNRMRGIVTRVVKDGVMAQVEMQAGPFRVVSLMSRESADELGLDVGRVAVASIKSTHVVVEIPGS
>NZ_CP034550.1|WP_033429247.1|7522454_7522934_-|DUF4383-domain-containing-protein
MTTSADRVDTRRRPVQSFSLLVGAVFLLVGVLGFIPGVTDHYEHLGFAGPGSDAELFGVFEVSVLHNLLHLLFGVLGVAAARAAGASRAFLVVGGFLYLLLWVYGSIIDVDSAVNFAPFNSADNLLHLGLGAGMILLAVLATALERSRGQYPGREQRGR
>NZ_CP034550.1|WP_033429248.1|7522124_7522346_-|hypothetical-protein
MDPFILFTVLPLLLIAGVLIWGNLAWGGVVVIVFAALLVLLDSWTNRPLPFDVPDDGDYDYDYDEPPSAGRRR
>NZ_CP034550.1|WP_153278579.1|7520611_7521619_-|hypothetical-protein
MKHVFPRWVRTRVRTFASAAVVLVVVVLSGAPVGAGAGTPRWVDDSSAGAVERIADVGAAADPLPAQWHDLNGDGRSDLVAREAATGTVYAYPHSGVFNGAGTYPTRHAVLFGAQALNWIAVSEVTGDFAADLIARRGDGTLVVYPGSGQLQGGSTFGEEVLVGTGWGGVTALSVADVTDDGDQDIVARWGDGSLHVYPHTGIFDGTNTWASPELIGTGWNIMDWIGVAELTSDDSRVDVVGRRAGDSTLQMYPHNRWYDGTATFVGPVQVGTGWHSVEIMSLVTVTLDDFTDVVARRSTGELVVYRNAGGYNGDFTFHSPTGLGGGWNTMNLIA
>NZ_CP034550.1|WP_153278578.1|7519250_7520639_-|hypothetical-protein
MEHDEPHRLNPEAVLPPFWEFSSSWSSMHSGAVVQMKHRIRKMWSVLLGSVLIATAAPAANAQVPAPDPAGETIVNRFYETALDGTALKSAGQQYYEVNAADFSVAAPGGVGAAKPALPLPEVASGWDVGFEQECRDPANAAKSSSAEGWTKDHYRWCRGVTVNWDRLICGSGQCRLVAKILIQVVWLGYADAHNRKFHIWGKTLEVIEVEGEFDDDARVAAWADCAGTPGRSSCSARYQPDTRATLADIKAGRNNVFETVLTDTSIPNVGLTGEAVAPLEVYSWFTGAGGTLHPTDSLNTVSARVASRCDSVRLRSKQACTFNNVSAFLTYDKNDNAYPVSELVDHIRYAQDVLGAPGRWRNGAPDGPPLTRLRHAPTQNQNRARPKAQCRAANPGGWNGRVQQCDEYPFASTKEGGASGGPVSGKLIAARQNKEGGIQLNNWYQWDRIIDNDTFWVNLIG
>NZ_CP034550.1|WP_153278577.1|7518818_7519166_-|hypothetical-protein
MPQTGVPAEYGSLVNDPGSGQVELLTGREDGPVHLTIEVHDSPAPPSPRTWEESVTAIVRWERVTRARIQQLDITMDEEWEFELPAPHFVLEAHYQADEDHEQWLLRLWPATTTT
>NZ_CP034550.1|WP_153278576.1|7518513_7518759_+|hypothetical-protein
MSVQRDGKRVPLWLVASSAAAAVVVLLGAWWFTRPGDVHEGDPPEGTTVINRVVEGPLDQISRTGPVTLWTPLTTQPPRTP
>NZ_CP034550.1|WP_033429254.1|7518069_7518474_+|hypothetical-protein
MKAVRTALCAVFAVLALTASTASTAHASAAPEPTCAVLAPYDFECVFVGVVKGRVFLDPVAQRATTQVYLGHSLFGWQKVAEATWPRSRVQAATCGTAFNHTACLYTDFNWSERFVSLRATYDEREIGNWRFTW
>NZ_CP034550.1|WP_033429243.1|7526163_7527189_+|zinc-binding-dehydrogenase
METSVLEVVLPGVVEPDGLVLRRGPRPTPGRGQALVRVEATGVSFAEQQMRRAKYYDQPPFPFVPGYDLVGTVAEVGPGVDPALVGGRFAALTKTGGWASHALVAAADLVPVPAGVDPAEAETFVVNGITAWQMLHRVARVTEGHTVLVHGANGGVGSTLVQLARLAGARVIGTASPRHHDAVRALGATPVDYRDPDLPAKVRALAPGGVDAVFDHVGGPGIVDSWRLLAPRGALVAYGTASTRDEGGNSRLPVLRLFARLLWWDLLPNGRTAKFFNIWAGRRRAARFRARLADDLGAVLALLAEGRLRPQVAARVPLAEVARAVELAESGTVAGKVVLVP
>NZ_CP034550.1|WP_033429242.1|7527231_7527711_-|arginine--tRNA-ligase
MVFATATAAGWLGEGRRAEHVGFGSVLGEDGKLLRTRAGASVKPVELLREAVARAVGTGAVKYADLSSDREKDYVFAWDRMPAVEGNTSVYLQYANARARSVLGRAGREVGPGTPVVLAEAAERALALRLLGLSAPARLTSRVLALGPELLGIEAPDRL
>NZ_CP034550.1|WP_033429341.1|7528101_7529829_+|arginine--tRNA-ligase
MSEAIGRVREDLAGANPVVRRSEHADFQSNAALALARRVGAGPRDLAADIAAALDGEADGPIASAVPSGPGFLNLTVAQDALWAQVAARLADPRLGVGTPERGRRTVIDYSAPNIAKEMHVGHLRTTVIGDSLARVLGFLGADVVRQNHLGDFGTQFGMLIQYLDEHPDAAWHQDELDGGTSAVSALDGLYRSARAEFDADPAFADRARSRVVALQSGEPATVAAWKDIVAESERSFRAVYDRLGVLLTPEDSVGESFYHPMLGDTVAELVDAGLVVESEDALVFYSSEVSGPEGRPVTLMVRKRDGGYGYDATDLATIRYRIRDLEADRLVYVTDSRQALHFRLVFEAARRAGWLTGGVGAEHVAYGTILGPDGRPFKTRAGGTVRLTDLLDAAVSRARAVVADKNPDLDPAELDRIAEQAGIAAVKYADLSTSRVKDYSFDVDRMVSFTGDTGVYLQYAHARISSILRRAGDPDTAVDSVDSTVPLQPAERTLALELDAYGTVLDEVATTLEPHRLCGYLYDLARAFTAFYEACPVLKAEDPVRGNRLALCRLAVRTLGHGLDLLGIVAPDRM
>NZ_CP034550.1|WP_051764982.1|7530712_7531975_-|MFS-transporter
MSERTGAGRPRALDPEPPTRARRLLNQLLPPPGPQRALVGSVLVVTVGGGILLGSSTLYLTRIVGMSAVEVGLALTVGAAAGLVAGPLVGHVADRRGPKQVHIGVMLCGAAATAGFVVARTFWALALVSLLTALVGAAGSASRAPLIRALAGDRSTWFLSYQRAVTNVGVMAGILIATIGIQLDTGPVYVALILSSAFTFLLACAILTRLPHVDPLPVEPAQRRWVALTDRPYLAVALVNGLISVHLAIPAFALPLWIVDSTTVPRAAITAVFILNGALVVGLQVRLSRGVVDPRSAGRRMRWAGLALLVASALIGATATLPTWPAVVVLLVAVVSYTFGELWHAAASFELAFSLAQPHAQGQYAGIFGLGQGAANAAGPAILAAVCLEQGLPGWLVLGGVLAAVCLPMPAIVRWASPGA
>NZ_CP034550.1|WP_153278580.1|7531971_7533135_-|hypothetical-protein
MTKSEDCLAALHRAGFGDKKFDAVQTTWEFSVVTAAVLGRALGCRSIDPTTALLFRDKSLQKARLREAGVPVARCEVIEDIYHVEDVKFEFEQAVLKPIAGGGTTSTSVVRERKDLEAASRTAREKKETNRTFLLEEYIPGSEWMAEGVVFGGEVLFYGLGAYTQPCLDAITGQVPISLRRLDPVQESDAYRAADPVVRDAIAALGLQDGVFHMELFQEEGTGRIVFSECAARRGGALTQEQVMAKFNVDMGEAALLGALGHKPELVVKVNPDVVGCAALYGPEGTVFGYPTADELVAQPNVAFAQMYVPPGANLNSNFSASADMLGALLVVTGTVEEFEIRVAELRDWFRDRLFVAEPGLTSGERWAWQRRQSPDREYRDWLYAGE
>NZ_CP034550.1|WP_033429240.1|7533897_7535337_+|aldehyde-dehydrogenase-family-protein
MISFDNFVDGKRCAAADERRLDVVDPTTGEVYATSPLSGRADVDAAVDAAARAFESWRWTTPSERQLALLRIADAVEARAAELVDAECADTGKPRARTAAEEIPPCVDQLRFFAGAARLLEGRSAGEYLAGHTSYVRREPVGVCAQVTPWNYPLMMAVWKIAPALAGGNTVVLKPSETTPATTTLLAGICAEFLPPGVFNVVCGDRDTGRALVSHPRPDMVAITGSVQAGMAVAEAAAANLARAHLELGGKAPVVVFADADIAAAAEGIAAAAYYNAGQDCTAASRVLVATEVHDELVAALTGQARATRTGAPDEPGVVYGPLNNAAQLDRVSATVDRLPDHATVHHGGSRVGERGYFYAPTVVSGVRHDDEVSQNEIFGPVITVQSFSGEDEAVRCSNAVRYGLASSVWTRDHSRAMRMTARLDFGCVWVNTHIPFVAEMPHGGFKHSGYGKDLSLYGFEDYTRIKHVMSAVEGLPGS
>NZ_CP034550.1|WP_033429238.1|7535649_7536108_+|Lrp/AsnC-family-transcriptional-regulator
MDAIDRKILAALQDDGRLTVTELASRVGLSVSPCHRRLRELERVRTIRGYRAVVDAAALGLTFQALVFVTMRQEDRNTLLGFEAAVACIPEVVQAQRLFGDPDYLLRVVTADLAAYQRLEDDHLAALPGIQRLTSTLVMKDVVDSRPLSAPA
>NZ_CP034550.1|WP_033429237.1|7536152_7536929_-|inositol-monophosphatase-family-protein
MADTSTAELIRFAERLADESRHLLGRAVAEPASVDTKADNSFVTATDRAIETRLRELIAHHYPDHGVLGEEFGSHDLDAEFVWVLDPLDGTAPFIAGIPVYGTLIGLSRRGRPWLGVLDYPATGDRWVGESGVFATRNDVPVRTRPCADLATALATCSNPDFFQPQEHAAFATVRDAVRYTLYGASSYAYGMLAAGRTDLAVDSGLKVYDVFAPAAVISGAGGIVTEWSGAELHLGSRSRVLAAGDLVLHGEVVDLLN
>NZ_CP034550.1|WP_033429236.1|7536983_7538147_-|phosphoserine-transaminase
MRTEKPTLKPARPWFSSGPCAKRPGWDPDALREAFVGRSHRDPAGRARLFEVIERSKQVLGLPADYRVAIVPGSDTGAIEMAMWNLLGYTGVEVCCWENFGFTWLHDISDQLRLDDVTVHRAERYGAFPDVSRVDFDRDVVFTWNGTTSGVRVPGAGWIPDDRRGLTICDATSAVLGMEIDYRKLDVITWSWQKALGGEGAHGMIALSPAAVERLAAFRPDRPLPKVFRLVRDGRLIDELFEGFTINSPSMLAVEDALDALRWCADIGGGAELVARTHRNFTAVEQWVRAHPHLEFLAERKETISPTSICLKFDDGLLDGIRAPRWEFVKSLCRKVEDNGAGYDLSAHREAPPGLRIWGGPTVDTADIEKLLPWIDWALSETLTEFT
>NZ_CP034550.1|WP_084716156.1|7538244_7539285_-|peptide-synthase
MNTSPGAGGSAFRRIEHGPHFEVPVRHREFLAGSEHENFPDSVPDIGDMIPVLGADGSVSPAAVRAAVDEALPRYGGVLLRGLPLTAKAGFEHLVANLGYDRTGYEGGIAVRANDAGVALNASQEDHRITLSPHNEMAYLPNYPRRILFFCESAATSGGEVPVNDIRETGAIIPEDVKRTFRDKGIRYHRNLARENSNGEMGWVATFRTEDKGAIEEHLTASGFDFEWGGEDELRYHYRREAFTAHPETGEELWFNQVTELHCSYWRSHPHFPPGLPDHEYPATTAYGDGSPIDEELISFLRGALWRTTRAVRMSPGDVLVLDNQVLQHGRFAFDGPRRHFVSLTR

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Crispr_ID: NZ_CP034550_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_15

8739842-8739933

Orphan

Consensus_repeat	Method
GCCGACCTGGCGTGACCGCGGGCGGCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_15

>merge|NZ_CP034550|15|8739842-8739933|CRISPRCasFinder
GCCGACCTGGCGTGACCGCGGGCGGCGGGAGAAGGCCCTGCGATCCGCGCGAGTGCCCGCGGAGCCGACCTGGCGTGACCGCGGGCGAGCGG

>NZ_CP034550|15|13|8739842-8739933|CRISPRCasFinder
GCCGACCTGGCGTGACCGCGGGCGGCGGG	AGAAGGCCCTGCGATCCGCGCGAGTGCCCGCGGA
GCCGACCTGGCGTGACCGCGGGCGAGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_153278674.1\|8730594_8732268_-\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|213192
NZ_CP034550.1\|WP_153278673.1\|8726278_8726737_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084715975.1\|8729399_8730587_+\|chitin-binding-protein	unknown	unknown	gnl\|CDD\|376983
NZ_CP034550.1\|WP_033427872.1\|8727480_8727900_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP034550.1\|WP_051764467.1\|8744688_8745201_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377216
NZ_CP034550.1\|WP_084715973.1\|8726821_8727451_+\|uridine-kinase	unknown	unknown	gnl\|CDD\|223645
NZ_CP034550.1\|WP_153279002.1\|8743394_8744558_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP034550.1\|WP_051764462.1\|8725016_8726282_-\|PPE-domain-containing-protein	unknown	unknown	gnl\|CDD\|227938
NZ_CP034550.1\|WP_033427875.1\|8733353_8734202_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187578
NZ_CP034550.1\|WP_033427879.1\|8741670_8743389_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|271374
NZ_CP034550.1\|WP_033427883.1\|8747316_8747976_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225524
NZ_CP034550.1\|WP_084716001.1\|8741284_8741674_+\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
NZ_CP034550.1\|WP_084716000.1\|8740472_8741258_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP034550.1\|WP_033427878.1\|8740074_8740383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278675.1\|8745704_8746313_-\|transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP034550.1\|WP_063741238.1\|8728011_8729328_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP034550.1\|WP_033427876.1\|8734327_8736808_+\|DUF3516-domain-containing-protein	unknown	unknown	gnl\|CDD\|378795
NZ_CP034550.1\|WP_084715978.1\|8746426_8747320_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|224327
NZ_CP034550.1\|WP_033427881.1\|8745353_8745605_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084715976.1\|8732284_8732974_-\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376649

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_153278674.1\|8730594_8732268_-\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	9.99833e-89
NZ_CP034550.1\|WP_084715975.1\|8729399_8730587_+\|chitin-binding-protein	gnl\|CDD\|376983	pfam03067, LPMO_10, Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.	2.17847e-61
NZ_CP034550.1\|WP_033427872.1\|8727480_8727900_+\|hypothetical-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	9.46796e-09
NZ_CP034550.1\|WP_051764467.1\|8744688_8745201_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377216	pfam04072, LCM, Leucine carboxyl methyltransferase. Family of leucine carboxyl methyltransferases EC:2.1.1.-. This family may need divides a the full alignment contains a significantly shorter mouse sequence.	6.9073e-28
NZ_CP034550.1\|WP_084715973.1\|8726821_8727451_+\|uridine-kinase	gnl\|CDD\|223645	COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism].	1.73882e-11
NZ_CP034550.1\|WP_153279002.1\|8743394_8744558_+\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	3.80513e-76
NZ_CP034550.1\|WP_051764462.1\|8725016_8726282_-\|PPE-domain-containing-protein	gnl\|CDD\|227938	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion].	2.3199e-08
NZ_CP034550.1\|WP_033427875.1\|8733353_8734202_-\|SDR-family-oxidoreductase	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.12969e-90
NZ_CP034550.1\|WP_033427879.1\|8741670_8743389_+\|cation-acetate-symporter	gnl\|CDD\|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	3.79979e-62
NZ_CP034550.1\|WP_033427883.1\|8747316_8747976_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225524	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism].	7.60556e-64
NZ_CP034550.1\|WP_084716001.1\|8741284_8741674_+\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	2.31097e-06
NZ_CP034550.1\|WP_084716000.1\|8740472_8741258_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	6.03665e-49
NZ_CP034550.1\|WP_063741238.1\|8728011_8729328_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.51864e-49
NZ_CP034550.1\|WP_153278675.1\|8745704_8746313_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.23056e-21
NZ_CP034550.1\|WP_033427876.1\|8734327_8736808_+\|DUF3516-domain-containing-protein	gnl\|CDD\|378795	pfam12029, DUF3516, Domain of unknown function (DUF3516). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 460 to 473 amino acids in length. This domain is found associated with pfam00270, pfam00271.	0
NZ_CP034550.1\|WP_084715978.1\|8746426_8747320_+\|metallophosphoesterase	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	2.2948e-20
NZ_CP034550.1\|WP_084715976.1\|8732284_8732974_-\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|376649	pfam01891, CbiM, Cobalt uptake substrate-specific transmembrane region. This family of proteins forms part of the cobalt-transport complex in prokaryotes, CbiMNQO. CbiMNQO and NikMNQO are the most widespread groups of microbial transporters for cobalt and nickel ions and are unusual uptake systems as they consist of eg two transmembrane components (CbiM and CbiQ), a small membrane-bound component (CbiN) and an ATP-binding protein (CbiO) but no extracytoplasmic solute-binding protein. Similar components constitute the nickel transporters with some variability in the small membrane-bound component, either NikN or NikL, which are not similar to CbiN at the sequence level. CbiM is the substrate-specific component of the complex and is a seven-transmembrane protein. The CbiMNQO and NikMNQO systems form part of the coenzyme B12 biosynthesis pathway. The NikM protein is pfam10670.	5.37217e-43

>NZ_CP034550.1|WP_033427876.1|8734327_8736808_+|DUF3516-domain-containing-protein
MTLTDRLPPSPDPDLLFDAFAEWAADRGLSLYPAQQEALIEIVSGSNVILSTPTGSGKSLVATGAHFAALAEGKRTFYTAPIKALVSEKFFALIDTFGAENVGMMTGDASVNETAPIICCTAEILANIALRDGARADVGQVVMDEFHFYSEPDRGWAWQVPLIELPQAQFLLMSATLGDVTFFEKDLTRRTGRATTTVRSAERPVPLHFQYVTTPLHETIEELLHGREAPIYVVHFTQASALERAQSLMSVNVATRAEKDDIARMIGRFRFTSGFGKTLSRLVRHGIGVHHAGMLPKYRRLVEQLAQAGLLKVICGTDTLGVGINVPIRTVVFTALSKYDGQRTRHLKAREFHQIAGRAGRAGYDTVGTVVVQAPDHVVENEKALAKAGDDPKKRRKVVRKKAPEGFVSWSDQTFERLKNAEPEPLTSSFQVSHAMLLNVIGRPGNAFAAMRHLLEDNHEDRPAQRRHVLRAISMYRGLLAAGVVERQGDDIRLTVDLQVNFALNQPLSPFALAAIELLDRESPSYPLDVLSVVESTLDDPRQVLSAQEHKARGEAIGAMKSEGIEYDERMALLEEVTYPKPLAELLEAAFTTYRRGHPWVADHHLSPKSVVRDMFERSMTFAEYVSYYQLARSEGLVLRYLADAYKALRQTVPEDAKTEELSDLQEWLGELVRQVDSSLLDEWEKLRNPGEEAEAALAEAPPAVTRNVRAFRVLVRNALFRRVELAARRNYHELGQLDGDAGWSAEDWRDALEPYFEEHGEIGTGPNARGPAMLVITEEPGRWVVRQIFDDPAGDHDWGFTAEVDLAESDETGTAAVRVTEVGRL
>NZ_CP034550.1|WP_033427875.1|8733353_8734202_-|SDR-family-oxidoreductase
MIVVTGATGKLGRLVVNALLERGAEVVAAVRDPGRARDLADRGVEVREADYDRPGTLGPAFDGAGQVLLISGSEVGRRVPQHWAAVDAAKTAGVRLLAYTSVLHADTSTAVVAPEHRATEEYVRASGVPFAFLRNGWYNENYEAVVRESLTTGVIPGAAHDGRVASAARADYAEAAAVVLTGEGHEGAVHELSGDVAWTMAELAALVTEVSGTEVVYHDMEAVQYARTLVGGGVPEVVARTVARMDTDIAEGLLADVTGELARLIGRPTTPMRETVLAAVKR
>NZ_CP034550.1|WP_084715976.1|8732284_8732974_-|energy-coupling-factor-ABC-transporter-permease
MTQPLAMHMSDGLLNAPTSLLFVAVAVAGVGLALAKARGDLDDRTAPMAGLVAAFVFATQMLNFPVLPGVSGHLLGGALAAILVGPWVGALCVSVVLVVQSLFFADGGVTALGANITNMALIGTAAGYLTALALRRFATRNKGALAAVAFTSALVNTVLASAGFVLEYAIGGQGGVALGTVAAAVLGVHVLIGVGEGLITAVTVTAVAAARPDLVHLLRGVPRELELRS
>NZ_CP034550.1|WP_153278674.1|8730594_8732268_-|cobalt-ECF-transporter-T-component-CbiQ
MVRAGQPGAGGRGLLLRQLGPGRAGPRHHRARHRRARRGPPAGRLAAGRLRAGRRRPVHRGGGRDRRGADAGRRGRSVPAAAQAPLRQVILHRPGDSPVHRLAPQAKIVAAVVAVLCVVATPREAFWAFGFYLLALVAVWAVARVPPGWFAARSVIELPFVLLALALPFTGAGERVDVLGVPVSVEGALAGWNILAKGTLGLLTSLTLAATTAPHDVLLGLRRLRVPAVLVTIATLMLRYVEVIAAEARRMRVARVSRGDDPRFLWQLGATARGVGALFIRSYERGERVHLAMVSRGWTGRAPGDEVRAPLPERSAPALVVERLAYAYPDGHQALFGIDLTVRRGERVAVLGPNGAGKTTFALHLNGVLGGGSGRVEVAGLPVDAANLREIRRRVGVVFQDPDDQLFMPTVRQDVAFGPTNFGLRGAELDRRVDEALAAVGMTAFADRSPLHLSGGQRRRVALAGVLACDPEVLVLDEPSANLEPVARRELAEVLLRLDRTTLMVTHDLPYALQLCPRSVLVDGGVVVADRPTRELLADAELLARHRLELPFGFRLD
>NZ_CP034550.1|WP_084715975.1|8729399_8730587_+|chitin-binding-protein
MRSRLQSVRFLGAFPDLNEEVDDVKARRWVALAAAGVAGVLVSVLVNVVGAPTASAHGAMMKPGSRTFLCWQDGLTPTGNIQPVNPACSAAVSAGGTNSLYNWFGVLRSDGGGRTRGFIPDGKLCSGGNATYSGFDIARNDYPVTHLTAGANFRWSYNMWAAHPGTFHLYVTKDSWSPTRALAWDDLESTPFHSVTNPPSSGSVGTVDGQYYWNANLPAGKSGRHIIYSVWTRSDSQETFYNCSDVVFDGGNGEVTGVGRGGNTTTTTTSTTTSTSTSTTTSTTTTTSTSNQPGDPNCMAIYKITSSWSGGFQGEVEVMNHSTSAYNGWTARWTYANGQTVNSVWNGVRSGSGAEVVVKNVDWNRTVAPESSVKFGFTASYSGTNSLPTVTCTSP
>NZ_CP034550.1|WP_063741238.1|8728011_8729328_+|MFS-transporter
MFRALRGRNYRLWAFADLISVTGSWMQLIGLNWVVLERTGSATSVGLSVLLGALPSVLLGPWAGSLADRLPVRRVILVCQVLHAVLAALLALVVWRHAPMALVFALTCASGLVSVFDVPALGRFGGQVVAREDLGNAVALGSVLSSTGRILGMSGAAVLAAALGSPALFLVNSVSFLAVVAAVLAVRRDELHPLGRGPADRAGVAAGLRYVLGSGRLLVLFALGFALSGLGRNYQVTMAAMSPDATAYGLLSTVFAVGTVLGGLAAAARRTLTVRLLLVVACGTSLLQAVAGIVPGALGFALVLLPIAAGAVVIDTTMSTRVQLDTAEAMRGRLLAVNSSVGAAAGAVGAPLLGWLCERVGAPETLVLAGTVTLLVSLAAASVLIAPPERRTALAHRVLRRLPRHPSPPPGYPGHPAGHPPGPVRPGRAPRKRAHVRV
>NZ_CP034550.1|WP_033427872.1|8727480_8727900_+|hypothetical-protein
MAEFEREQRIPVDPQAVFDVARDVNSMEAWLPDGLQVESSGPERVTGRVSIGDEIDEAEGYLAAVPEQRRLEWGDLEGAGYSGWLQVDEDGPGSSRVVLHLDVRGEHPGAVGGEAHELTDEYLGQALERLAALAADRVT
>NZ_CP034550.1|WP_084715973.1|8726821_8727451_+|uridine-kinase
MRGLHPVPSPAVHARAVLLAGPSGSGKSTLAAHLGWPVLRLDDFYREGDDPLLPRDESGRPDWDAEGSWNTEDALAAVVELATTGTVEAPVYSIGEDRRVGCRTLTAPGPFIAEGLFADRLVAGCREAGVLADAVVLAPGAVVTFARRFARDVAEARKPVPLLLRRGLRLMREHPAVVRRCADAGMRPVDPHRARAELATIGAGHPAAV
>NZ_CP034550.1|WP_153278673.1|8726278_8726737_-|hypothetical-protein
MVVRVRGVEHAKQLREELEHERVAGYVVPPEVGRPTGAGAAGVVAEGGDLIEMDLPAFTAAVSDLDRLHAVLTDLLGRADRELDQPLGDGRGPVALHMRRAFGLRGGDLSGGVRHALRSYLDELEAVRASLQGVRDAQQAQDQQVGQALGRA
>NZ_CP034550.1|WP_051764462.1|8725016_8726282_-|PPE-domain-containing-protein
MSERKGGFWSDFHDYSARTRRRNERRVRQREANRKPENFGKINWRAYTHRQLWDMVKSAEPGRMATRTYEWKKLAEEVDQATADVRRIVQTLVLSWRGPSAVAAAESASRLTEWGADASQRAYQVGTGLDAYTSAVEEAARAMPEPVHPDAERWFREGYDVTTLDGPQGAYMLKQLLDDHMPSKEEQKAAMERAVRVMDEYEHASGEVKRELPTFDEAPVVAQQPSAAVYAGPTTPPQVVPPQYPPPDSRVPADPHLPPGLPPTGPDPVPPPGTRLPDGTTTAAAAGNPGFGTPGFGPSGGFGGFGPTGGGAHGVPGGGPGGFGPLGSGPLGSGPLGSGPLGSGQPGPGGASGVLGAVPGGAAARGGFGPVAGAGGPQGFGVYPPVAPTNREEDGEHRNRYDQGLDLLDDLPPAYPPVLGE
>NZ_CP034550.1|WP_033427878.1|8740074_8740383_+|hypothetical-protein
MTSDPHVGLARIAEGPPGTSAELVSALTELARLANHFSEVVRGLQEPTRRLVGSAAAASVSLAARRAEEAFLELEVTLGDAAAARRSLPLATPRGEDGRPMV
>NZ_CP034550.1|WP_084716000.1|8740472_8741258_+|response-regulator-transcription-factor
MERALRVLAVDDEAPALEDLVYLLRSDPRVGHVEAVTDATKALRTLHRAMDAGQPVDAVFLDIRMPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRAERLAESVHRIVHEVLDSKTPEPAAAAPAEKAPDVGDEVIPVELGGITRFIRLADIRYVEAHGDYARLHTATGSGLVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDELRLEDGHLSVNIGGAVLPVSRRHARHLRQLLVRRNRQPS
>NZ_CP034550.1|WP_084716001.1|8741284_8741674_+|DUF485-domain-containing-protein
MVVTGPQPPRQRVVVTSPRTRAPRAPRPYPASREIDEQSELGAVYMRSLIRTQRRLGLLLCAVVCGSVAALPLVFTLVPSVGTQRLLGLPLPWLLLGVLVFPVFVLAGWFYVRQAERGEREFAELVERS
>NZ_CP034550.1|WP_033427879.1|8741670_8743389_+|cation-acetate-symporter
MSSTYGVIAVLAVAIGTVLVGTYGLRISRTTSDFFVASRTVSPWWNASAIGGEYLSAASFVGIAGLIFAHGPDMLWFPVGYTAGYLVLLALVAAPLRRSGAYTLPDFAEARFASPTVRAVASVFALGIGWLYLLPQLQGAGLTLHTVTGAPDWAGALVVAVVVTLNVASGGMRSVTFVQAFQYWLKLTAIAVPVVFLVVAWHAHGARDLGGPRLPEFTQRTTVTFDSATSFRVPLATPYEGAGVVDGRRVDGAGELAEGDHTAAAGSRLTFPAGSAVPHVSTIPVNTDETWALPMRGGERFPLYAVYSLIIATFLGTMGLPHVIVRFYTNPNGRAARRTTLIVLALLGVFYLVPPIYGALGRLYTPELLMTGDTDAVVLVLPSRVVDGLGGQLLGALVAGGAFAAFLSTSSGLMVSLAGVLSRDVLRLRGVRGFRWATVPAVLVPLGMTWLVGKVPVADMVGLAFAVAASSLCPLLVLGIWSTRISTVGAVAGMLAGGVPALVAGMVTISGSGGAWYDVFLARPAAWTVPLGFVVMYAVSLLTPRRVPPGVNHVMVRLHAPENLGLRSQDRL
>NZ_CP034550.1|WP_153279002.1|8743394_8744558_+|sensor-histidine-kinase
MWTVGAVLLVGAAVVITLWRTSRARNDFLTNEQRITFETLHTAWSAAPPLRAGLVPEAAKKSVRHLRTLLGTPALALTDETEVVAWEGAGAHHAAEAMDLAAEVFATGRTRAFDITCSTPDCPVHTAVLAPLTVEGRVVGVLAAYSREASAGLVRATNEVARWASGQLELAELDRSRTRLVEAEVRALRAQISPHFIYNSLSAIASYVRTDPERARTLLLDFADFTRYSFRRAGDFTTLSEELRSIDQYLALERARFGERLQVTLQIAPEVLPVTVPFLCLQPLVENAVRHGMEGKVGPGRISILAADAGEEAHITIEDDGIGMDPEALRRTLAGQVDETAGIGLGNIDERLRRCYGDDYGLVVETAPGLGTKISVRVPKYSAGVHA
>NZ_CP034550.1|WP_051764467.1|8744688_8745201_-|class-I-SAM-dependent-methyltransferase
MPRPRWALVARAPRPRPFARWGRNSAFTLVAARPLGHDDAVRRALDDGVRQVVVAGYDSRAWRLARPGVRFFEVDHPATQADKRRRAPAGGPRYVPVDLAADPLDRALREAVLFVVEGLTPYLTEPRVRALLTALARLGGPPGGINPGAHFVEAVPARRDREHGPGTSDG
>NZ_CP034550.1|WP_033427881.1|8745353_8745605_-|hypothetical-protein
MPELSRREVALLRATAANRVELTGSAEPDVRVDDLPFCDPVAARSLVRAGLIAPVAPVGPGQWALACLTAAGSAALGADLLVA
>NZ_CP034550.1|WP_153278675.1|8745704_8746313_-|transposase
MGITTSWAEDPMTNQVRPVQPFGRTVGAEIARQVQQHAHPAVAPRRADDAALATLLRARQRGDAQRQEPWVRRAPEAPPRPPHADVIEQLAVRLVPPSLWAAVEPLIPPAKVRRQGGGRGRVSDRAIFTAIVFVLTSGCAWRHLPATFGVTVPTVHRRFQEWTEAGLWLRLRRVAVDGALDDAEWLRLVLDAAERRGARAAG
>NZ_CP034550.1|WP_084715978.1|8746426_8747320_+|metallophosphoesterase
MSGHSPSRAGGDTLGDVTTPPRLLATSDLHVTYQQNRDFVDAIRPPSPDDWLIVAGDVAEKFDDVEWALGLLRRRFARVVWSPGNHELWTTKDDPVQARGEVRYKQLVELCRSLDVLTPEDEFAVFEGQGGPVAVAPLFTLYDYTFRPAGTTDKATALAAAQEAGVVCTDEYFLHPDPYPSREAWSAARVAESERRLSAVDPSLRTVLINHWPLVRDPTFVLRYPEFALWCGTERTADWHLRFRAAVAVYGHLHIPRTIRKDGVRFDEVSLGYPREWQPRGWTGAPLLDVLREGDAR
>NZ_CP034550.1|WP_033427883.1|8747316_8747976_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MITDLLPPPVSAVDSFGDPDGAVLFPEEEEHVAKAVDKRRREFTTGRHCARTALAALGFPPAPLLPGPKREPLWPAGVVGSITHCQGYRAAAVGLVGQVRTIGIDAEPNEPTPDGVLEAIAVPGELARMPALRAAGDKVAWDRLLFSAKETVYKAWYPLARRWLGFEDAEVTLNPDDGTFSARILVEPPVVDGFTLDGFTGRWLAREGFVVTAIAVPAR

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Crispr_ID: NZ_CP034550_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_16

8910517-8910621

Orphan

Consensus_repeat	Method
CCGATCAGCACGGTCGGGCAGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034550_16

>merge|NZ_CP034550|16|8910517-8910621|CRISPRCasFinder
CCGATCAGCACGGTCGGGCAGCCGAGGAGTATCGGCGCGCCGCAGGTCGCCAGGTCGCCCGTGCGGGCCGCGGGCCGGCCGCCGATCAGCACCGTCGGGCAGCCG

>NZ_CP034550|16|14|8910517-8910621|CRISPRCasFinder
CCGATCAGCACGGTCGGGCAGCCG	AGGAGTATCGGCGCGCCGCAGGTCGCCAGGTCGCCCGTGCGGGCCGCGGGCCGGCCG
CCGATCAGCACCGTCGGGCAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_033427986.1\|8900014_8900695_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP034550.1\|WP_153278691.1\|8913807_8914143_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051764515.1\|8906128_8906938_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_CP034550.1\|WP_033427998.1\|8917245_8918778_-\|phage-tail-sheath-family-protein	unknown	unknown	gnl\|CDD\|226028
NZ_CP034550.1\|WP_033427985.1\|8899350_8900013_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP034550.1\|WP_051764517.1\|8918934_8919984_+\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|223598
NZ_CP034550.1\|WP_153278692.1\|8916177_8916336_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427990.1\|8908157_8910098_-\|putative-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|274051
NZ_CP034550.1\|WP_033427993.1\|8910802_8912617_-\|VgrG-related-protein	unknown	unknown	gnl\|CDD\|226032
NZ_CP034550.1\|WP_033427984.1\|8898151_8899156_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP034550.1\|WP_033427987.1\|8900794_8901418_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP034550.1\|WP_033427994.1\|8913370_8913802_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377718
NZ_CP034550.1\|WP_033427991.1\|8910097_8910508_-\|GPW/gp25-family-protein	unknown	unknown	gnl\|CDD\|377431
NZ_CP034550.1\|WP_037330342.1\|8902852_8906122_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP034550.1\|WP_033428089.1\|8912606_8913365_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_CP034550.1\|WP_033427989.1\|8907648_8908161_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|274050
NZ_CP034550.1\|WP_033427997.1\|8916789_8917233_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377718
NZ_CP034550.1\|WP_033427996.1\|8916332_8916785_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427988.1\|8901441_8902758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033427999.1\|8919938_8920667_-\|DUF4157-domain-containing-protein	unknown	unknown	gnl\|CDD\|379338

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_033427986.1\|8900014_8900695_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.37445e-72
NZ_CP034550.1\|WP_051764515.1\|8906128_8906938_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	0.000107652
NZ_CP034550.1\|WP_033427998.1\|8917245_8918778_-\|phage-tail-sheath-family-protein	gnl\|CDD\|226028	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only].	2.77712e-59
NZ_CP034550.1\|WP_033427985.1\|8899350_8900013_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	9.30472e-43
NZ_CP034550.1\|WP_051764517.1\|8918934_8919984_+\|carbohydrate-kinase-family-protein	gnl\|CDD\|223598	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism].	4.34684e-26
NZ_CP034550.1\|WP_033427990.1\|8908157_8910098_-\|putative-baseplate-assembly-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	6.56735e-124
NZ_CP034550.1\|WP_033427993.1\|8910802_8912617_-\|VgrG-related-protein	gnl\|CDD\|226032	COG3501, VgrG, Uncharacterized protein conserved in bacteria [Function unknown].	6.57639e-21
NZ_CP034550.1\|WP_033427984.1\|8898151_8899156_-\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.15746e-33
NZ_CP034550.1\|WP_033427987.1\|8900794_8901418_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.48799e-23
NZ_CP034550.1\|WP_033427994.1\|8913370_8913802_-\|phage-tail-protein	gnl\|CDD\|377718	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19. This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.	9.7342e-36
NZ_CP034550.1\|WP_033427991.1\|8910097_8910508_-\|GPW/gp25-family-protein	gnl\|CDD\|377431	pfam04965, GPW_gp25, Gene 25-like lysozyme. This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.	3.8714e-31
NZ_CP034550.1\|WP_037330342.1\|8902852_8906122_-\|hypothetical-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	3.78693e-12
NZ_CP034550.1\|WP_033428089.1\|8912606_8913365_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	7.5454e-09
NZ_CP034550.1\|WP_033427989.1\|8907648_8908161_-\|phage-tail-protein	gnl\|CDD\|274050	TIGR02242, putative_secreted_protein, phage tail protein domain. This model describes a region of sequence similarity shared by a number of uncharacterized proteins in bacterial genomes, including Geobacter sulfurreducens PCA, Mesorhizobium loti, Streptomyces coelicolor A3(2), Gloeobacter violaceus PCC 7421, and Myxococcus xanthus. In all cases, the genomic region resembles a phage tail region, based on tentative identifications of neighboring genes. A region of this domain resembles a region of TIGR01634, another phage tail protein model. [Mobile and extrachromosomal element functions, Prophage functions].	5.86347e-28
NZ_CP034550.1\|WP_033427997.1\|8916789_8917233_-\|phage-tail-protein	gnl\|CDD\|377718	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19. This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.	2.35239e-38
NZ_CP034550.1\|WP_033427999.1\|8919938_8920667_-\|DUF4157-domain-containing-protein	gnl\|CDD\|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	9.29053e-33

>NZ_CP034550.1|WP_033427991.1|8910097_8910508_-|GPW/gp25-family-protein
MDFIGRGLAFPVHTDATGSVALVGGGREVVESIRLILATAPGERPMRPEFGCAIHDLVFAPADAATAGRIAYEVRLSLERWEPRITLTDVSVGFDEVDRGTLLIDIRYALRGTNDPRNLVFPFYVIPPHEADEEGA
>NZ_CP034550.1|WP_033427990.1|8908157_8910098_-|putative-baseplate-assembly-protein
MSLPTPNLDDRRFQDLVDEAKRRVQQHCPEWTDHNVSDPGVTLIEAFAHMVDELLYRLNRVPDLHYLRFLDLIGVKLFPPTAARGEVTFWLSAPRDVPVVVPAGAQVATERSEVEDPVVFTVDRELTVVPCSLAHLVTAVADPDVPPADRTDELRDGKAPEVFADPPAAGDAVLFGLSDAVPGCAVLLRVEAHAEGRGVDPRDPPWAWEAWNGAGWSPCEVDRDSTGGFNQPGDVVLHVPHSHTASVVARLRAGWLRCRAVEPGPDRPTYQRPPKLLAVTAATIGGTTAATHADVVRGEVLGVSEGVPGQRFPLARTPVVVDEGALVVEVACPDGWERWHEVRSFAESGPQDRHVVLDRVGGEVLFGPAVRQPGGGVRHYGAVPAKSAAVRVPEYRTGGGLRGNVARGLLRVQRDPVPFVSSVTNRRPAAGGVAGESVADAALRGPLLLRTRDRAVTAEDYELLTREAAPEIARVRCVPAGEAGSAVRVLVVPSVAADEESDFAALQPGADVRERIERFLEQRRCVGARVSVEPPFYQGVTVVAQLRARAGTPEDVLRTRAVQALYDYFNPVSGGPDGDGWPFGRPVQSGEVFAVLQRLPGVELVEDIRLFGANPVTGERGAAVARLDLPANGLAFSYGHQVRVAR
>NZ_CP034550.1|WP_033427989.1|8907648_8908161_-|phage-tail-protein
MTPHPLADRLPAVYLEDLFTQRFLAALDEVLEPVFTVLDGFAGYLDPRLAPEDFLDWLAHWVALDVGEGWSVLQRRVLVARAVELHRWRGTRRGLAEHVSLLTGGQVEVRDSGGVTSTDRPGLPVVENPARVHVRVRVARPQEVDRTRLHAAIASAVPAHVAVELEVVGA
>NZ_CP034550.1|WP_051764515.1|8906128_8906938_-|zinc-ribbon-domain-containing-protein
MQPSDQKSPSPPRPRLTERRQPQPGDLICGQCGEANTPTRKFCSRCGSALAEAAVVPEKWWRRLLPERAPAKAGTRHRRGNARRGVGKVLRWSFLTALLAAVGLYGLAPAVRSAVNTWALDRVHDVKGVFATDLTPVHPTSVTATAESAGHPALLAADNAKNTFWLAPVEPRPPALVLDFGQEVDLRQAIVRAGDPDDFQAAHRPKKLHLVYPTGRTFDVELADTPDEQRVKIEGSEGATSVEVHVVEVHRSLRGSEVALAEIEFFAVR
>NZ_CP034550.1|WP_037330342.1|8902852_8906122_-|hypothetical-protein
MKHLALVALLLTGLLTGLLPAAAGRPQPVLAAARDPLTPYRVGVSRGRPGDIWSTDAVGGDARPTTDTGPLHESDPAYSPDGSLIAYTAWYASTDDPGRVMIADADGADPRPLSDREGEREPTWSPDGTMIAVTDDNGISVVRVSDGAVLTRVPRPAHVSAYDSQPAWSPDGDSIAFARRSENPTTPRVRPFTVHGSTPDGFTTSATVRTPTVPTRPEILFLVDTTGSMEHAVGELASDLDGVMGRIQTEEPDARFGLATYQDYEDGERRYRLVEHLGDRAAVRTALAAIVVDPSHGYPDLPEDWFNALHEVARGADRVFEQPDTSRIVVLAGDASSHECPPTDPTPDPSSPDPDPPWTDPPTTPTTPTTPARPGLRAPVRPAAAQPTGEPDWCGPYWRRDTVIKDLTTHGEGDENRHIHVVGVPVETGTGEHLDSRGQATAITDATGGSLVEEGAPPGLVAAAVEAGIAEVPVTVEPVAECPANVSISFTPASATVPGDTDVTFTETVRLDQGASSRSPDPPRCRVRFRFDGRYPAQPHDQYVDVTEAAGPTVVVGADAVPSPDGAPVPVPFTATATDAAGAPLTPTCDATPGALFPVGLTPVTCTATSAGRTATASTGITAFEPREQNLRTIWLAELAGTAVRREVDLTARFNEGCGQDDDAPAWSPDGNRLAYSSSSWLCVLDLGSRIARGLAEDDPGYPAWSPDGELIAFQRYDGESPARVLAIPAGGGDPTPLVSFDGEDAERPAFRPLPDLRVTGAVVPGAVAFGGTTTARFTVTNRGLAPPRAADLALTVPAGLRVDAVTTTAGTCAPTGCALGRLAPGATAEVRLTLTGAGAGRHVVAAALPDDVNPGDNRAEAAVEVAERVRPPENPGSLSMAVAVLPAEAFVGGDDLVLSFRVRNGAPRPMTDVRVVTSLPPALLPVAGCTTCPLGTLEPGQEAEVRVALPARAAVDTTAGGSVLGTGPDSDPADNTATTRVLVRQPELVVDPRTGPTGFVPHATGRGFPPGATVRLAWTAGLSPTPGEFAVRPDGTFDAQFLVFHNDLIGQRRLEATAVLGPRFGPVRSGDFLVVPRTLQPPDFASRD
>NZ_CP034550.1|WP_033427988.1|8901441_8902758_-|hypothetical-protein
MGATATLSTTGLAVAPGEDVTCTVVVRNTGDLVDEFTVDVVGDAAGWATAEPAVVNLVPQGSASVVVRFAPPRAAEVAAGPVPFGIRVTSREDPYGSVVEEGSVEVGEFTGVSAELVPAKVEAGSRGKFEVAIDNVGNAPVAVRLHPADPDGELEFRLDRTDLVLTPGTAAFVRLVAKPRDTFLRGPSQPRPFRVEVVPSSGPSLTATGTLVQRQLLPKWLLPALAALLALAVALVALWFTVLRPAVKSAARDAAAEQASEVKAVAEQAQAGAQQAQGAAEQAKTNSEAAMREVGLDPSASPGSPPTSRRPDPAAEQGEPTDFRVAADADVTANRDQFADFTADLPADKALLVTDIVLQNPRGDTGTVRVLREAADGTRGVLLEVGLANFRDLDRHYVEPLRFRKGEKVVVQVSCQNPDSAVNCTPSVSFSGRAVDAP
>NZ_CP034550.1|WP_033427987.1|8900794_8901418_+|response-regulator-transcription-factor
MNGERIAVALHAADSITRAGVTAALRSRPEVRLVDPEEPAAVALVVLERLDAEAQQLLRRLQAPGGAGIVLVTGDTADPELLNVVSSGVSAVVRRAEATPDALVRLVRATAAGQGALPPELLGRLLDRVSRLQRNVLHPNGWSMAGMSDRETEVLRLIADGFETREIAEKLCYSQRTVKSILHDITNRFQLRNRAHAVAFALREGLI
>NZ_CP034550.1|WP_033427986.1|8900014_8900695_+|response-regulator-transcription-factor
MVPAALRALVVDDHPLFRYGLAATLGDAADLEVVGEASGGAMAVSMAAALRPDVVVMDLNMPDLGGVEATRRIVAHDPEARVLVLTMFDDDESVFAAMRAGALGYLLKASRPQQIVRAVRAVGEGEAIFSPAIAVRLLAYFGSGPPEPVAAFPELTGREREVLRLMAAGRGNATIAGELVLSPKTVRNHVSNILRKLHVADRAQAVSRAKRAGLGDGSGHIGTPGP
>NZ_CP034550.1|WP_033427985.1|8899350_8900013_+|sensor-histidine-kinase
MHREFMVPTDAADEARRRLLRDLHDGLGPSLAAVALGLRAARHLAQRDPASAGLLLARLEEEVHAAVDEVRRLASGAYPAVLARLGLVGAVREHVASLTGRHPVRVAVECDGLPELPVAVQVAAYRIVCEALTNVVRHAGARHCAVRLGFDDRLRVEVVDDGVGAWSPENDGDAEHDGGAGVGLRSMCERAREVGGTWRVEPAAAGGTRVAADLPVPGGV
>NZ_CP034550.1|WP_033427984.1|8898151_8899156_-|radical-SAM-protein
MGRTGGRAVLQVHPTRLCNLRCRHCYSSSGPDVAESVPIAVLAGVVREAAQLGYDVLHVSGGEPFLYPELPALLRSAREAGMRTTVTTNGVALTQRRIGVVRGLVDLAAVSLDGDRATHDRIRDQPGCFDKALAGIRRLTEAGIPVGVVTTLTQGNATQLGEVAVAAARSGALLLQVHPLEPEGAANRLMAGERPDAVELAYAAVELGRIAEEHGLAVQLDAVPRTVLMREPQAFMAAPVPAGRPLGSWLTPLVVEANGAVVPVSYGFDRRYWLGNVQERPLAALAGGWDPAPFLALCRGTWQRLVEGRTGPLITWYGHLVRASRSRRPAAAGR
>NZ_CP034550.1|WP_033427993.1|8910802_8912617_-|VgrG-related-protein
MPGDTFANSLVVEVDGGPLPADVKGLLVHAFVDDSRNLPDLFVLRFRDPGHVVLGKANLKVGAKVVLKVQTSDPGGPRPLTSGEVTAVGVEFDAGGTFTEVRGYDLAHRLFRGTRVAAYPNMTVADVVRKVAQRASIPLGRVDDVRGFGRPHTQLSQAGTSDWEFLARLAALVGAQVAVVEGKLEFRLPEEPTSAPAANARARTSPLVLEMHRTLLSLRASVTAAEQVPEVQVRGWDVENKEHVLATRPAEAVGTEVAGVDPVHLAREFGSPPHLAHGPHRTQAAASAHATSLATQLGGACTELAGVARGNPELRAGTAVALTNIGEQFSGKYVLSGTRHLFAADVGYTTEFTASGRQERSLYGLANGGARPADHRGLVPAVVSDVRDPARTGRVKVTFPWLAQDFTSGWARTVHASAGNGYGALALPEVGDEVLVGFEHGDFDAPYVLGGLYNGKDAPPGLTKEPVDANSGEVTARAFVSRKHHKVEFVEDDGIVISSGDGKFVVKLDQRNQVVEVTSGKAVTIKARDGVTIDSGTGPLELKGQRITARAQADVAIEAGAQLKAAGQAGVKVEGATVSVAGQGQAELTASGPVTVRGALVRIN
>NZ_CP034550.1|WP_033428089.1|8912606_8913365_-|LysM-peptidoglycan-binding-domain-containing-protein
MASPITFTSAGTARATSYAAPTNLQKALLSVHRPPKAGGAAKPGDFMHDITFQFNPRELSLTKNAKWERSRQPNVPKSGTPEFKGSDPCKLTLEVFLDATERMDDGVVKKVEQLFACCVPTEDSRQHGKGSPPWVVFKWGGMTGFPAFVSSVSAKYTLFTPAGVPVRATCTVNLEEISGEPGGQNPTSGALAARDSHVVVAGDSLQSLAYRAYGNAELWREIAEANDIDDPMRLRPGRRLLVPALEEVRDAR
>NZ_CP034550.1|WP_033427994.1|8913370_8913802_-|phage-tail-protein
MTQAEEAVAVCFVVRIDDQSLGSFNSCDGLGVEFTLEQREEGGNNGMVWQLPTRIKYSNVKLSRPVTKDSSKIMDWIAGMAAGVSRRTAVIEARTLGGTVVASWALSGVVPVRWSGPQLSADSPKVATETLELAHHGFLGTAR
>NZ_CP034550.1|WP_153278691.1|8913807_8914143_-|hypothetical-protein
MPIANVVPRVEPAQPVAAVVQRDVGQALAGAPAEQVSAAPGDMTGTTDMTTATSTDTASTSTSTSTSTGAPNTPPDPEALLNKLYDPLVRRLKAELWLDRERRGALTDRWR
>NZ_CP034550.1|WP_153278692.1|8916177_8916336_-|hypothetical-protein
MTYAADRLHEEVAYVAYHFHWSWDSILDLEHADRRRYVAEIARINTRISQGR
>NZ_CP034550.1|WP_033427996.1|8916332_8916785_-|hypothetical-protein
MRRVMAGVGAPGVGAPVGAPVGAPVVEPMRTEFAFELPRGYVDDAGVVHRAGVMRLATARDELVPLRDDRVRENPAYLTVVLLARVVVRLGTVTDVHAGVVENLFAADLAFLQDVYRRVNSEGHTRAPVACPECGHGFSVDVAGGRPGES
>NZ_CP034550.1|WP_033427997.1|8916789_8917233_-|phage-tail-protein
MALPDLDTSVGHSFGLEVDGVAIKQISEVSGLKMEQDVIELKQNTSDGKYVIKKLPGRPKAGEVTLTRGLTADNSFEKWVKDAHFGKMGSARKGGAIIVYDYEGQPIKRYKLTNAWPKSLEIGSLKAGDTSVLTEKLVVTYEMMEVE
>NZ_CP034550.1|WP_033427998.1|8917245_8918778_-|phage-tail-sheath-family-protein
MPTYLSPGVYVEEVEAGARPIEGVGTAVAAFVGFAARGPFNTPTLVTNWAQYTQVFGDYVEDCYLAQSVYGYFLNGGTNCYVVRIGGERAGAGGNGKPVEAPTAQAALGGYRVAAKQLDAGEITVEVADAQGENAPDDRFTLLVKQNGKVVETHHVTTKRTKENVVTVVQEKSKLITIEEAASSGLAKPDKGSVTLKDSPAAPPVPREVAADDYVGDVADRTGFGGLEAVEEVTMVAVPDLMSSYRRGAITLESVKAVQLAMIAHCELMGNRVAVLDPPPGLNPQQVKDWRLNDAGYDSKYAALYYPWVKVFDPASDEHVHIPPSGHVAGVWARTDGTRGVHKAPANEVLRGAVALETQLTKAEQELLNPIGVNCVRSFPGRGIRVWGARTLSSDPAWRYLNVRRLFNYLEESILNGTQWVVFEPNDDALWARIRRTISAFLVTEWRKGALFGLTPDEAFYVKCDRETNPAESIDLGQVVCEVGVAPVKPAEFVIFRLAQISGGTSLVNE
>NZ_CP034550.1|WP_051764517.1|8918934_8919984_+|carbohydrate-kinase-family-protein
MVTAHPDVVGVGALNLDHVVTTDLDVGLEPGVEHAVDAATARAAVEAVAPAGPRTALGGSAFNAVHAIARTGSGLRLGYVGVAGRAPGFDVVREFERLGVDHRFVFEEDDLLCGTCVSLVRGGERTLLTHDGANARLADLVGRHFDELAGYLAGARVVHVTSLLDDRAPGRLPALLTEVRRRSPGTVLSFDPGHAWCAARPPGVDGIARLSDCLLLNEREFRALGDHRPGEPERDTAARLLARFADPRAAVVVKRPTGTAVFRRDGDEFHPGELLAERDIADPTGAGDAFAAGLLAVLARDRSAVGLGASLGMALARHKMRHAGYEGFPGLFQEIYSSSSSSRCTAGGT
>NZ_CP034550.1|WP_033427999.1|8919938_8920667_-|DUF4157-domain-containing-protein
MRGHEHDHDGEAGFRPRGDRPDRDEGDLLGRAAAAGRRDVLGPAGMLGLQRVVGNAGASALAEESPVHDVVNSGGSPLDADVREDMEARFNQDFGDVRVHTDGAAHESARSVSAHAYTVGSDIVFQRDAYDPSSDAGRHVLAHELTHVVQQRSGPVDGTDAGGGIKVSDPSDRFEREASANADRVMAGPAPGAAVQREAAGHREVSVQRDEMPAPAPEEAPEEEVAQTYVPPAVQREEDEEE

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Crispr_ID: NZ_CP034550_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_17

9020405-9020582

Orphan

Consensus_repeat	Method
GGCAATGTCAACAATCGACATTCGCG	CRT
GCAATGTCAACAATCGACATTCGC	CRISPRCasFinder
GCAATGTCAACAATCGACATTCGC	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP034550_17

>merge|NZ_CP034550|17|9020405-9020582|CRT,CRISPRCasFinder,PILER-CR
GCCAATGTCAACAATCGACATCCATGCCCCGCGAACCGCTTGACCTGCCGGGCAATGTCAACAATCAACATTCGCGTTCCGCAGGATCAACCCGGCGGGGCGCAATGTCAACAATCGACATTCGCGTCTTGCGAGACCGAACTGGGCAACGCGGCAATGTCAACAATCGACTTTCGCA

>NZ_CP034550|17|5|9020405-9020582|CRT
GCCAATGTCAACAATCGACATCCATG	CCCCGCGAACCGCTTGACCTGCCG
GGCAATGTCAACAATCAACATTCGCG	TTCCGCAGGATCAACCCGGCGGGG
CGCAATGTCAACAATCGACATTCGCG	TCTTGCGAGACCGAACTGGGCAACGC
GGCAATGTCAACAATCGACTTTCGCA

>NZ_CP034550|17|15|9020406-9020581|CRISPRCasFinder
CCAATGTCAACAATCGACATCCAT	GCCCCGCGAACCGCTTGACCTGCCGG
GCAATGTCAACAATCAACATTCGC	GTTCCGCAGGATCAACCCGGCGGGGC
GCAATGTCAACAATCGACATTCGC	GTCTTGCGAGACCGAACTGGGCAACGCG
GCAATGTCAACAATCGACTTTCGC

>NZ_CP034550|17|3|9020456-9020581|PILER-CR
GCAATGTCAACAATCAACATTCGC	GTTCCGCAGGATCAACCCGGCGGGGC
GCAATGTCAACAATCGACATTCGC	GTCTTGCGAGACCGAACTGGGCAACGCG
GCAATGTCAACAATCGACTTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_084717123.1\|9032361_9033153_+\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|236578
NZ_CP034550.1\|WP_033435308.1\|9024611_9026201_+\|D-aminoacylase	unknown	unknown	gnl\|CDD\|238622
NZ_CP034550.1\|WP_033435277.1\|9021479_9022229_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP034550.1\|WP_033435310.1\|9028556_9029036_-\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|176866
NZ_CP034550.1\|WP_153278698.1\|9022225_9023194_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP034550.1\|WP_153278697.1\|9008979_9011727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP034550.1\|WP_033436023.1\|9017073_9017670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033435276.1\|9021068_9021467_-\|endoribonuclease-L-PSP	unknown	unknown	gnl\|CDD\|129116
NZ_CP034550.1\|WP_033435722.1\|9012722_9013112_-\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NZ_CP034550.1\|WP_033435278.1\|9023319_9024600_+\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
NZ_CP034550.1\|WP_084717175.1\|9013468_9014065_-\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_CP034550.1\|WP_033435725.1\|9014340_9014682_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033436024.1\|9016858_9017056_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033435723.1\|9013174_9013369_-\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NZ_CP034550.1\|WP_084717226.1\|9015081_9016602_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173790
NZ_CP034550.1\|WP_033436022.1\|9017814_9020109_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP034550.1\|WP_153278699.1\|9027600_9028470_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226765
NZ_CP034550.1\|WP_033435279.1\|9026197_9027592_+\|permease	unknown	unknown	gnl\|CDD\|308194
NZ_CP034550.1\|WP_033435721.1\|9011877_9012726_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223640
NZ_CP034550.1\|WP_033435280.1\|9029254_9032128_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_084717123.1\|9032361_9033153_+\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|236578	PRK09583, PRK09583, mycothiol-dependent maleylpyruvate isomerase; Reviewed.	6.32046e-77
NZ_CP034550.1\|WP_033435308.1\|9024611_9026201_+\|D-aminoacylase	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	2.7896e-108
NZ_CP034550.1\|WP_033435277.1\|9021479_9022229_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	7.13255e-70
NZ_CP034550.1\|WP_153278698.1\|9022225_9023194_-\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	9.69001e-83
NZ_CP034550.1\|WP_033435276.1\|9021068_9021467_-\|endoribonuclease-L-PSP	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	9.90855e-41
NZ_CP034550.1\|WP_033435722.1\|9012722_9013112_-\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	9.94647e-63
NZ_CP034550.1\|WP_084717226.1\|9015081_9016602_+\|S8-family-serine-peptidase	gnl\|CDD\|173790	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.	7.82197e-124
NZ_CP034550.1\|WP_084717175.1\|9013468_9014065_-\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	5.78268e-95
NZ_CP034550.1\|WP_153278699.1\|9027600_9028470_-\|hypothetical-protein	gnl\|CDD\|226765	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown].	4.67367e-14
NZ_CP034550.1\|WP_033435310.1\|9028556_9029036_-\|polyketide-cyclase	gnl\|CDD\|176866	cd07824, SRPBCC_6, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	7.72212e-40
NZ_CP034550.1\|WP_033435723.1\|9013174_9013369_-\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	2.18168e-19
NZ_CP034550.1\|WP_033435278.1\|9023319_9024600_+\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	5.25357e-168
NZ_CP034550.1\|WP_033436022.1\|9017814_9020109_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.92065e-09
NZ_CP034550.1\|WP_033435279.1\|9026197_9027592_+\|permease	gnl\|CDD\|308194	pfam02447, GntP_permease, GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter, and GntT, a high affinity transporter.	6.81185e-126
NZ_CP034550.1\|WP_033435721.1\|9011877_9012726_-\|RNA-methyltransferase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	8.57775e-63
NZ_CP034550.1\|WP_033435280.1\|9029254_9032128_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP034550.1\|WP_153278697.1\|9008979_9011727_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.33479e-06

>NZ_CP034550.1|WP_033436022.1|9017814_9020109_+|XRE-family-transcriptional-regulator
MGTTFGDLLRAHRLRVKLTQEELAEGSGVSVRAISDMERGRAKGPQRRTVEALAGVLALSPAETRELLDAAKEGRVRRPVDVAPSALPPDVPDLTGREQELADLVSVAEQARTTSLVVVHGPPGAGKTTLAVRAAYRLAPRFADGCFFFNLRGMDVRPLHPSEVVHRMLLALGVADKQVPASEAERSDLYRALMRERSTLLVLDNASDEAQVRPLLATGRGSVVLVTSRQVLGGLEAGRRLGLDVLDPVAAFDLLGAIAGRARVGAEPVAAARVAKLCGHLPLALRIAGNRLASRPKWTIGHLAGQLVDERRRLSALTAGDLRVRTAFEMSYRQLSDKAAVLFRRLSLVPGADFGPDVAAVLADVDRFAAEDTLEELVDMSLLDTAEVPGRYAFHDLIRVFAGERLVDEEPAPVVGQVRERVVDWLLDTAVGAAGFFGPDARSTPVGAVRNQEDADAWLTAETANWLGALRWAGSAGRHDRVLRVATAMHWYSDQRGRGETWEEVFTAGVAAARALGSVRDEAVQLNFLTWTLAVLLRRYDDALGLHDEAWRAAVAAGDLREQGWAMHYRTVSELRSGRLEEARVDARRAQELFRRAGYALGEHISLSALGLVLHELRRYEDAVLVHRELLGRVRSGELDLAPVMAAEMSATLLLRQADSLVRLERWPEVLATADDALNRLRGAAAPPSLCGAHHLRGLALHRLGDPAAARPELVRAAELAESHHDRRLPAVLDALADVHDALGDPVAAGGVRDRAAEARSSDR
>NZ_CP034550.1|WP_033436023.1|9017073_9017670_-|hypothetical-protein
MKWYADQPARLARQVVADLVAVAWVWAWVVVALAAGDAVRGLRAPGDRLVAAGRGLSDTFGDAAGNARDVPLVGGRLGAALDKGRDAGTTLSDAGTTQVEAVETTALWLTVALIAVPVAFLLVTWLPLRLRFARRAGALRRLRDQGRVDLLALRALNGLSLRDLAVFPEDPTEGWRRQDPEVVEALAGRLLRAGGVRP
>NZ_CP034550.1|WP_033436024.1|9016858_9017056_+|hypothetical-protein
MPRTALGTALTALALVAAATPAHASGTAPTSPPDATQMSSTIQDATQMGDPGATQMVVVPDGSRG
>NZ_CP034550.1|WP_084717226.1|9015081_9016602_+|S8-family-serine-peptidase
MVEFRASWARLAGAGAAAVVAAALVAAPAQAAEGVVRDAGAPDAVAGSYIVVLKDAVGVQSFTEKIDAEVTHRYSAAVNGFAARMDAGAARKLAADPAVAYVAQDRRVRLLADQPNPPSWGLDRVDQRDLPLNRNYSYGTTAGNVHAYIIDTGIRTTHADLGGRATFDANTTGDGNNTDCNGHGTHVAGTVGGSAHGVAKGVRLHAVKVLTCGGSGTIAGVVAGVDWVTANAQKPAVANMSLGGGANDTLDAAVRRSILSGVTYAVASGNSNADACSFSPARVAEAITVNATDQADNRASFSNWGGCTDLFAPGVGITSAWNTGDTATNTISGTSMASPHAAGAAALVLANNPGATPQVVRDTLVGAATPNKVVNPGAGSPNLLLFTGTAPQPQPGRDTLVRGETLQIGQTKVSQDGRYTLVMQGDGNLVLYAAGGQALWHTSTYGTGATYAVLQYDGNFVVYTAAGVARWHTGTHGTAADRLIVQNDSNLVLYGPTGQVFWHRLQ
>NZ_CP034550.1|WP_033435725.1|9014340_9014682_+|hypothetical-protein
MTDLPPNNVRELSDVPSVEVISKAAIMLLSSAAERLGLADEDPASSPHRDLDEARRLITALAGLVTASVEYLGPHAAPLREGLQSVQRAFREASAYPDEPGQGPGEKYTGPVY
>NZ_CP034550.1|WP_084717175.1|9013468_9014065_-|translation-initiation-factor-IF-3
MTSPSNRGAPASTEPRINDRIRVPEVRLVGPNGEQVGIVRIEDALRLAQESDLDLVEVAAQARPPVCKLMDYGKYKYESAQKARESRRNQQLTVIKEQKLRPKIDPHDYQTKKGHVARFLSHGNKVKVTIMFRGREQSRPELGYRLLQKLAEDVAELGFVESNPKQDGRNMIMVLAPHKTTKTRPVKQETQADDVVEQ
>NZ_CP034550.1|WP_033435723.1|9013174_9013369_-|50S-ribosomal-protein-L35
MPKNKSHSGTSKRVKVTGSGKLVREKAGKRHLLEKKSSKLTRRLSGTTEVAKNDASRIKKLLGI
>NZ_CP034550.1|WP_033435722.1|9012722_9013112_-|50S-ribosomal-protein-L20
MARVKRAVNAQKKRRTTLELASGYRGQRSRLYRKAKEQVLHSLNYAYRDRRARKGDFRKLWIQRINAGVRANGMTYNRFIQGLRLAGIEVDRKILAELAVNDAGAFTALVEAAKAALPSDVNAPVEDKV
>NZ_CP034550.1|WP_033435721.1|9011877_9012726_-|RNA-methyltransferase
MSADERAPRPGDAPFTERTPRVVAARRLTRRSGRDRAERFLAEGAQAVREALAWAAAGRGRVHELFVTATAGARNPELVREAAAAGVRVSGVTDKAAAVLSETVTPQGVVAVCSSVDVPLDVALAGGPRLVAVLHGVADPGNAGTVVRVADAAGADAVVFAGDAVDPHNGKCVRASTGSVFHLPIARARDADGVFAALRGAGLRLVAADGYAPEDLVTADLRGDLAAPTAWVFGSEAHGLPDEVVDSLDAALKVPIYGSAESLNLATAAAVCLYASARAQRA
>NZ_CP034550.1|WP_153278697.1|9008979_9011727_+|hypothetical-protein
MPEGMPRHEALERAARAADAVDHLPLGVSCRIALIRSAYDLGRYDLMLAPFAWCGTAEQRDPTAFDDWELHSFDWAHKWIVSGLLADPRFTLAQIGSFVDQLASRYQRLGYSMQPVHGARAELAAHVGDDEAYREHFARYLATDRGPMSDCEACVVEEQAGHLIRQGRHAEAVAHAEHQLARDTGCATQPQGILTTLTPAFVALGELDRARDAHVVAHRLVRDDLVGGYLDDHLVFCATSGNVARGVELLRAHLHRVHHSTSPSRAMDFAAGAALLLSRVDGAEEFTVPRDGITTPVRAAELRAQLEELALGIAERFDRRNGTDAVSRRVRQTLATPDTAPVPLVVPVAAPAPPESAEEEPPVEVADPVELARRMCDAFDRGEFTTGMRLLRSLPPDLDPLLPESLAALVAARRAIVAGHSRPQDEVLAELGAAVDRLVACGEHDLANRYRARGASLLGEEEGVAAARACLAEADAAGTPYTRVLTRLLLADLLAEGDDGESDEPRVLAAEALGLAEGGAPELVARARCDLAQHLATTGRLDEAQDEVTDVLVGDPSASVRFDALRLLLKIQTVRGDEAAVATGAEFVGSFSSPRGPWTAEAHRQRVASIERLGLEAEHLAELRDAVAAGREVGVPDDVAKACYALAGGYLKAGRFVEAAEVLEEAVRVIGTDEVDPDAVVPVHYRLGQVCARLDETESARRHLETALGLVPPDEPWRRAMVLDVLAGVLRRLDRPREAASAYQGAAAGWQEVSEFAEAAGSLVEAAAALPDEEAAGCAAVLASAEALLPRVEDVEQRTHLTARIAAIRAFLHGQSGDLTAAVEQNGVAEELAAQLGDDTWRTFLVTRGARFLLQAGDPANAEAEARRAGTLITDDTPLQLLGDTANVLEEALRTQSKPTTGDPLLRALQSRLDS
>NZ_CP034550.1|WP_033435276.1|9021068_9021467_-|endoribonuclease-L-PSP
MSKTENPKTEIRTDAAPTPVAAFSQGVRKGGILQVAGQVAFDPATGAVVGSTVAEQTRQALRNVVAVLEAGGASLADVVMLRVYLTDTGHFAEMNEAYGEFVTEQPFPARTTVYVGLPEGLLVEIDALAVVG
>NZ_CP034550.1|WP_033435277.1|9021479_9022229_-|IclR-family-transcriptional-regulator
MSQSLDRALTLVGELATGPKTLDELSGVIEVHKSTVLRLLRTLEAHRFVQREGVHHYRLGTALFDLAHRALEERDVRRSAEAALRELNNRTGYTVHLASYEGGEVIYIDKYDSTHPMRMYSRIGRRAPLHCTAVAKVLLADLPEPRRREVARAIDYVPLTANTITAPEAYLAELERVRAAGYAVDNAEHEDFIHCIAAPVRGARGEVVAAVSMSVPKVLLDFEGLMGHLPDLLATARAASVECGWSPRD
>NZ_CP034550.1|WP_153278698.1|9022225_9023194_-|sugar-kinase
MRFELPGCVVCLGETMAVLVPAAPGPVRGVRTWLRAIGGAESNVAVHLARLGVRSRWVGAVGDDAFGGAVLDAVGGAGVDVGGVRVDPDRPTGLYVKEANAAGSPVRYYRRGSAASAMGPEVSAGLVTDDVALVHVTGITAALSDSCLALLRAVLARPRRVPVSFDLNWRPALWRDRDPAVLRELADAADVVLVGSDEAEAVWGTGDPDGLRALLPNPTTLVVKQGARGATVVEGGVSTFQEGLRVEVVEPVGAGDAFAAGYLAAHLAGCAPARRLRAGHLQAAAALLTREDVGEPLPPEVTAPLLDADPATWAAAHLRRRR
>NZ_CP034550.1|WP_033435278.1|9023319_9024600_+|amino-acid-deaminase
MCNVRSEHVDLDAVAAIRRERVDWRFKGLPADVFGETVEEVAARRLDLFADGFVGPLVVLDAAALEHNLATMARWCAERGVLLAPHGKTTMAPQLFARQLAHGAWGITAANTSQLRVYRAFGVPRVLLANQLVDPAGLRWLAGELAADPSFEFTCWVDSTAGVARMTEALGSPARPVDVLVELGAPGGRTGARDLATAVEVARAAHASPALRLVGVGGYEGALAHDASDGARSTVDGYLDGLRALALEIHRLFEVDEPIVTAGGSAYFDQVAAKITGSWPFPVRPVLRSGAYVTHDDGFYRAISPLGRTPGAEPFRSALRAWAQVTSRPQDDLALLTLGKRDASFDEGLPEPQVVRGRDGAVRPFDAEVTALNDQHAFVRLPAGSDVEVGDWVGLGLSHPCTVFDKWQLLPVVEGTTVVDLVRTYF
>NZ_CP034550.1|WP_033435308.1|9024611_9026201_+|D-aminoacylase
MDIVFRGARVVDGTGAPAYRADVGVLDGRIAEIGDRLDGRRVVDADGRVLAPGFIDMHSHSDLQVLANPEHLAKVTQGVTTEVLGQDGLSYAPVDDDVLAALRAQLAGWNDDPAGFDWDWRSVGEYLDRLDRGIAVNAAYLVPQGTLRMLCVGYEDRPATPAELDRMREVLARSLREGALGMSSGLTYTPGMYADTAELTELCRVVGELGGFYSPHHRSYGAGALEAYAEMVRVSRDSGCPLHLAHATMNFEVNRGRAGELLALLDEAIAAGADITLDTYPYLPGATYLSALLPSWAGEGGPDATLARLSDVDTRERIRVEIEETGSDGCHGVPVDWSTIEVNGVRRAENAHLVGLSVAEAARRAGRPPAELYFDVLVSERLGTSCLMHVGHEDNVRAIMRHPAHTGGSDGLLVGDRPHPRAWGTFPRYLGRYARELGVLGLEECVHHLTGRAARRLRLADRGLVREGYAADLVLFDPDTVADTATFDEPRQAAAGITHVVVNGVPVVDEGGRTDALPGKSLRNPGSRA
>NZ_CP034550.1|WP_033435279.1|9026197_9027592_+|permease
MIDWLQESTGGLLTLSALSIALLLAMIIRWKVEPFIALIIVGLLVALAAGVPVETLVGSAQKASESLLEKGFGGILGHVAAIIGLGTLLGAVLEASGGAEVLTRSLLRAFGEKRAPLAMGLAGLIFGVPVFFDIGIFVLAPLVYVAAKRSGRSIVLYAMPLLAGLSVMHAFMPPHPGPVAAAGLLGVELGWIILMALAVAIPAWLVGGVLFSAWAGKRLHVPVPEEMLAAAEKLRGDEQKGEPPLGLVLGIIAVPLVLILAGTFGSILLAKGSVPYGVFTFLGTPAVALTIAVLLAFWLLGFRRGMSREQVTELSAASLRPVAMILLVVGAGGFFGAVLAATGVGKVLATSLSDLGLPVIALSYVISCGLRIAQGSATVAIVTTTGIVAPVVADLGYSQPQLALVVMAIAAGSIIASHVNDGGFWIVSRYFGLSVKETLQTWTVLETILSVVGFAMAMLLSLVV
>NZ_CP034550.1|WP_153278699.1|9027600_9028470_-|hypothetical-protein
MTRTRAVALATTALLGALLGACGQPGRPGAAVPAGPDRVAAAAGGEIVPGAPELTTAVVPDLGTVLADGDGLTLYRSDRDTNDPPTSTCDGDCARRWPPALADSVDVRSQGVDQALLGTLDRPDGTRQVTVAGWPVYHFAADTAPGRAGGQGADGTWFAAAPNGRKALPPTADLALATASVGALGTVLTDRTGMTLYRSERDTTDPPTSTCEDACALRWPPLLVGSPDFGVQGVDRSLVGTTTRADGRLQVTVAGRPLYLFAGDRLCGDAGGQGLDGVWFAARTDGSRA
>NZ_CP034550.1|WP_033435310.1|9028556_9029036_-|polyketide-cyclase
MPLNHYRFRSVWSVDSPPEQTFDVLADLAAYPHWWREVREARQVAEDAAELRCRSVLPYDLVFQTHHNTKDPRTGLLRADLVGDLDGTASWRLEPEGRGTRLVYEQEVVVRKPLLRALALISRPLLKANHELMMRSGRRGLRTYLAGFRAGAREGRPIG
>NZ_CP034550.1|WP_033435280.1|9029254_9032128_-|excinuclease-ABC-subunit-UvrA
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKPHCPKCGEAISKQTPQQIVDQVLAMEAGTKFQVLAPVIRGRKGEYLDLFSSLQSQGYSRAKVDGTVYALGEVPKLKKQEKHHIAVVIDRLSVKAGAKQRLTDSVETALRLADGLVELEFVDVPETDPGRVRGFSENLACPNGHPLAIEDLEPRSFSFNSPYGACPSCTGIGVRKEVDPELVVPDDELSLAEGAIAPWASGQTAEYFTRLLESLGLAIGYRMDTPWRQLPAKVQKAILHGVDEQVNVRYKNRYGRERSYYANYEGVIPFLERRQEQTESEYMREKYEGYMREVPCPVCQGTRLKPEILAVTLHHATKGDKSIAEVCAMSVAECSDFLDGLKLGRREAMIAGAVLKEIQARLRFLLDVGLNYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPGAGEHGGHVVHSGTYEALLKNKKSITGAYLSGRKEIPMPARRRPVDKKRQLTVVGAREHNLRGIDVSFPLGCLVSVTGVSGSGKSTLVNDILATVLANKLNGARQVPGRHTRVKGLEHVDKLVQVDQSPIGRTPRSNPATYTGVFDHIRKLFAATTEAKVRGYLPGRFSFNVKGGRCEACAGDGTITIEMNFLPDVYVPCEVCKGARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPINAIHRHLRTLVDVGLGYVRLGQPATTLSGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDIRKLLGVINGLVDKGNTVIVIEHNLDVIKTSDWLVDMGPEGGSGGGTVVAEGTPEQVAANEESHTGAFLREALPSVAAVG
>NZ_CP034550.1|WP_084717123.1|9032361_9033153_+|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MSFTDAAQARSAQTSVPAPRGHSPSVREALAGLAGVERATEALYEVVAGIDQTSMRGPSLLPGWSRGHVVTHLARNADALVNLLRWAKTGVEHPMYLSKADRDADIEEGAGRLPQLLRADLDAACQRFTAYARELPPTAWEAEVDHPRLGVLPAHRVPWMRLREVWCHLVDLDRGVGFGDLPPELVEELVDDAVALYADRPGVPAVRVEAVLPDGRQRGWALTGAGEASPVVSGAAADVLGWLTGRHSGARLDGAAPTLPKWL

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Crispr_ID: NZ_CP034550_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_18

9122635-9123395

Orphan

I-C,I-E,II-B

Consensus_repeat	Method
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	PILER-CR
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CRISPRCasFinder
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CRT

12 spacers

The CRISPR arrays of NZ_CP034550_18

>merge|NZ_CP034550|18|9122635-9123395|PILER-CR,CRISPRCasFinder,CRT
GTCTTCCCCGCGCGAGCGGGGGTGGTCCCACGTTGTCGTCGGCCCACTCGTCGGGGCGCAAGTCTTCCCCCGCGCGAGCGGGGGTGGTCCGGCGCAGTGCCAGAACTCCCGCCACGCCCGGTCGTCTTCCCCGCGCGAGCGGGGGTGGTCCGACCGCGCGCACACGCTCGCGGAACCCGGCCATGTCTTCCCCGCGCGAGCGGGGGTGGTCCCCCGCACGCGTCGCGACTGCCCGGCGGCGGTCGGTCTTCCCCGCGCGAGCGGGGGTGGTCCCGCCATGGGCGAGCTGAACGGAACTCCGGTGACGTCTTCCCCGCGCGAGCGGGGGTGGTCCGACCGCGCGCACACGCTCGCGGAACCCGGCCATGTCTTCCCCGCGCGAGCGGGGGTGGTCCCCCGCACGCGTCGCGACTGCCCGGCGGCGGTCGGTCTTCCCCGCGCGAGCGGGGGTGGTCCCGCCATGGGCGAGCTGAACGGAACTCCGGTGACGTCTTCCCCGCGCGAGCGGGGGTGGTCCGTTCACGTGGCACGTCACGCACGGCCCGTCCGTGTCTTCCCCGCGCGAGCGGGGGTGGTCCGGACACCACCCGCGACGCGGAGTCCCGGCTCAAGTCTTCCCCGCGCGAGCGGGGGTGGTCCAAGGTGAACTTCGCGGCCCGTCAGACCTGGGAGGTCTTCCCCGCGCGAGCGGGGGTGGTCCCTACAGCTATCAGATCGACGAGCGGGTTGCATCGTCTTCCCCGCGCGAGCGGGGGTGGTCC

>NZ_CP034550|18|4|9122635-9123395|PILER-CR
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CACGTTGTCGTCGGCCCACTCGTCGGGGCGCAAGTCTTC
CCCCGCGCGAGCGGGGGTGGTCCGGCGC	AGTGCCAGAACTCCCGCCACGCCCGGTCGTCTT
CCCCGCGCGAGCGGGGGTGGTCCGACCG	CGCGCACACGCTCGCGGAACCCGGCCATGTCTT
CCCCGCGCGAGCGGGGGTGGTCCCCCGC	ACGCGTCGCGACTGCCCGGCGGCGGTCGGTCTT
CCCCGCGCGAGCGGGGGTGGTCCCGCCA	TGGGCGAGCTGAACGGAACTCCGGTGACGTCTT
CCCCGCGCGAGCGGGGGTGGTCCGACCG	CGCGCACACGCTCGCGGAACCCGGCCATGTCTT
CCCCGCGCGAGCGGGGGTGGTCCCCCGC	ACGCGTCGCGACTGCCCGGCGGCGGTCGGTCTT
CCCCGCGCGAGCGGGGGTGGTCCCGCCA	TGGGCGAGCTGAACGGAACTCCGGTGACGTCTT
CCCCGCGCGAGCGGGGGTGGTCCGTTCA	CGTGGCACGTCACGCACGGCCCGTCCGTGTCTT
CCCCGCGCGAGCGGGGGTGGTCCGGACA	CCACCCGCGACGCGGAGTCCCGGCTCAAGTCTT
CCCCGCGCGAGCGGGGGTGGTCCAAGGT	GAACTTCGCGGCCCGTCAGACCTGGGAGGTCTT
CCCCGCGCGAGCGGGGGTGGTCCCTACA	GCTATCAGATCGACGAGCGGGTTGCATCGTCTT
CCCCGCGCGAGCGGGGGTGGTCC

>NZ_CP034550|18|16|9122635-9123395|CRISPRCasFinder
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CACGTTGTCGTCGGCCCACTCGTCGGGGCGCAAG
TCTTCCCCCGCGCGAGCGGGGGTGGTCC	GGCGCAGTGCCAGAACTCCCGCCACGCCCGGTC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GACCGCGCGCACACGCTCGCGGAACCCGGCCAT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CCCGCACGCGTCGCGACTGCCCGGCGGCGGTCG
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CGCCATGGGCGAGCTGAACGGAACTCCGGTGAC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GACCGCGCGCACACGCTCGCGGAACCCGGCCAT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CCCGCACGCGTCGCGACTGCCCGGCGGCGGTCG
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CGCCATGGGCGAGCTGAACGGAACTCCGGTGAC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GTTCACGTGGCACGTCACGCACGGCCCGTCCGT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GGACACCACCCGCGACGCGGAGTCCCGGCTCAA
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	AAGGTGAACTTCGCGGCCCGTCAGACCTGGGAG
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CTACAGCTATCAGATCGACGAGCGGGTTGCATC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC

>NZ_CP034550|18|6|9122635-9123395|CRT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CACGTTGTCGTCGGCCCACTCGTCGGGGCGCAAG
TCTTCCCCCGCGCGAGCGGGGGTGGTCC	GGCGCAGTGCCAGAACTCCCGCCACGCCCGGTC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GACCGCGCGCACACGCTCGCGGAACCCGGCCAT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CCCGCACGCGTCGCGACTGCCCGGCGGCGGTCG
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CGCCATGGGCGAGCTGAACGGAACTCCGGTGAC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GACCGCGCGCACACGCTCGCGGAACCCGGCCAT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CCCGCACGCGTCGCGACTGCCCGGCGGCGGTCG
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CGCCATGGGCGAGCTGAACGGAACTCCGGTGAC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GTTCACGTGGCACGTCACGCACGGCCCGTCCGT
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	GGACACCACCCGCGACGCGGAGTCCCGGCTCAA
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	AAGGTGAACTTCGCGGCCCGTCAGACCTGGGAG
GTCTTCCCCGCGCGAGCGGGGGTGGTCC	CTACAGCTATCAGATCGACGAGCGGGTTGCATC
GTCTTCCCCGCGCGAGCGGGGGTGGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_051765527.1\|9112653_9114162_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223540
NZ_CP034550.1\|WP_051765535.1\|9127958_9130973_-\|AfsR/SARP-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|276938
NZ_CP034550.1\|WP_033430597.1\|9112133_9112571_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430601.1\|9124016_9124196_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051765533.1\|9123632_9123920_+\|EF-hand-domain-containing-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278703.1\|9122079_9122229_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716329.1\|9127238_9127955_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|131643
NZ_CP034550.1\|WP_063741319.1\|9118183_9119107_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP034550.1\|WP_033430600.1\|9121564_9121960_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430604.1\|9133077_9133350_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051765529.1\|9115430_9116369_+\|HNH-endonuclease	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716330.1\|9134595_9136971_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NZ_CP034550.1\|WP_033430602.1\|9124444_9127135_+\|DNRLRE-domain-containing-protein	unknown	unknown	gnl\|CDD\|370266
NZ_CP034550.1\|WP_033430598.1\|9116378_9118187_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
NZ_CP034550.1\|WP_033430599.1\|9120459_9121296_+\|dioxygenase	unknown	unknown	gnl\|CDD\|238241
NZ_CP034550.1\|WP_153278704.1\|9133573_9134059_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_051765568.1\|9114171_9114450_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NZ_CP034550.1\|WP_153279007.1\|9133235_9133712_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_033430605.1\|9134146_9134380_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP034550.1\|WP_033430736.1\|9119511_9120339_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|131350

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_051765535.1\|9127958_9130973_-\|AfsR/SARP-family-transcriptional-regulator	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	7.35698e-30
NZ_CP034550.1\|WP_153279007.1\|9133235_9133712_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.09696e-27
NZ_CP034550.1\|WP_033430599.1\|9120459_9121296_+\|dioxygenase	gnl\|CDD\|238241	cd00421, intradiol_dioxygenase, Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear non-heme iron enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings. The members are intradiol-cleaving enzymes which break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. Catechol 1,2-dioxygenases are mostly homodimers with one catalytic ferric ion per monomer. Protocatechuate 3,4-dioxygenases form more diverse oligomers.	6.74582e-37
NZ_CP034550.1\|WP_084716329.1\|9127238_9127955_-\|CHAP-domain-containing-protein	gnl\|CDD\|131643	TIGR02594, hypothetical_protein, TIGR02594 family protein. Members of this protein family known so far are restricted to the bacteria, and for the most to the proteobacteria. The function is unknown.	5.48271e-07
NZ_CP034550.1\|WP_063741319.1\|9118183_9119107_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.49017e-13
NZ_CP034550.1\|WP_051765527.1\|9112653_9114162_-\|ATP-binding-protein	gnl\|CDD\|223540	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].	1.80114e-23
NZ_CP034550.1\|WP_084716330.1\|9134595_9136971_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	4.11082e-05
NZ_CP034550.1\|WP_033430602.1\|9124444_9127135_+\|DNRLRE-domain-containing-protein	gnl\|CDD\|370266	pfam09056, Phospholip_A2_3, Prokaryotic phospholipase A2. The prokaryotic phospholipase A2 domain is predominantly found in bacterial and fungal phospholipases, as well as various hypothetical and putative proteins. It enables the liberation of fatty acids and lysophospholipid by hydrolysing the 2-ester bond of 1,2-diacyl-3-sn-phosphoglycerides. The domain adopts an alpha-helical secondary structure, consisting of five alpha-helices and two helical segments.	5.46351e-11
NZ_CP034550.1\|WP_033430598.1\|9116378_9118187_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP034550.1\|WP_153278704.1\|9133573_9134059_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.08344e-25
NZ_CP034550.1\|WP_051765568.1\|9114171_9114450_-\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	8.81596e-10
NZ_CP034550.1\|WP_033430605.1\|9134146_9134380_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.05051e-06
NZ_CP034550.1\|WP_033430736.1\|9119511_9120339_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|131350	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA. This putative transcriptional regulator, which contains both the substrate-binding, dimerization domain (pfam02311) and the helix-turn-helix DNA-binding domain (pfam00165) of the AraC famil, is located proximal to genes of the 4-hydroxyphenylacetate catabolism pathway.	3.99894e-27

>NZ_CP034550.1|WP_153278703.1|9122079_9122229_-|hypothetical-protein
MRGSDLFLCGRVSHEAFARAWSGNTDEYAELLHRMPKVVATTRAGGTRA
>NZ_CP034550.1|WP_033430600.1|9121564_9121960_-|hypothetical-protein
MGGYTDAEGKTLRTAVYGAMVLVSVADEGEVDRESHAGIRAMAMLPPAVRGAVDAGAPELPAGSMADVEIGVLEALRESVALVSARSTAEAQAFANAVVAMCREVASADGRVGRAENAVLDKVRAALTTAR
>NZ_CP034550.1|WP_033430599.1|9120459_9121296_+|dioxygenase
MDASADGTDERRFSRKSVLRAAVAAGVALPVAMMGVPALARTVGQEGGLLEPTPMCDDGDDPTPPQTEGPYFKPNSPRRTSLVDAGTPGTRLTVTGYVFGLACQPIANALLDFWQADVNGVYDNTGFRFRGHQFTNANGAFTLSTIVPGLYPGRTRHIHVKVQAPGRPVLTTQLYFPGEPRNQTDTIFDPRLLMTVRSVGSGREAAFDFVLNVPQSSTNPTTTTTTTPSQPGGTWASGTNYVAGDQVTYGGAGYVCLQAHLAQPGWEPPNVPALWRAA
>NZ_CP034550.1|WP_033430736.1|9119511_9120339_+|helix-turn-helix-domain-containing-protein
MHRLEVPVPDAPPFAVGTFDAMGPMSRAAFPHRHTFHEIVYVTDGTGAHVVDLARWELAPPHLCVISPGQVHHWVDVRGLDGFVVLFTDDFLLDHPADRDLLRRLSGRPWLTPDEHAHHRMLGLLAELEEEYRRGADGAGSVLRALLHVLVVRAGRLSATPAAAPAPAGAVAGEFARLADRTDHGLWSVRAYAERIGVTPGYLTEVVKAATGRTPSALVREARTREAKRLLAKTDLAVRQVAARVGFADPAYFCRFFRRETGMSPGGFRRVADDR
>NZ_CP034550.1|WP_063741319.1|9118183_9119107_+|pentapeptide-repeat-containing-protein
MSGTEPHPTEPHPTDLRADCSRCFGLCCVVPAFARSSDFAIDKPARTPCPNLGADSRCGIHARLRDRGFTGCTVYDCFGAGQQVSRVTFGGVDWRDDPASAGAMFDVFPVVRRLHELQWYLTATLALAPARPVHAEAERLRAELAGLAGGTPRELLALDLDPHWGRVNELLLRASGLVRGKGRDRRGADLVGKDLRGAGMRAHGLRGAYLIGANLAGADLRLVDFTGADLRGADLSGADLTGAFYLTQAQLDSARGDRSTRLPAGLAHPAHWGGAPARQEARREAPPRGVTASRGRPAARRPGRPRR
>NZ_CP034550.1|WP_033430598.1|9116378_9118187_+|DNA-helicase-RecQ
MASQEVLRRVFGYDSFRGDQQEIVDHVVAGGDALVLMPTGGGKSLCYQVPSLVREGTGVVVSPLIALMQDQVDALRDLGVRAGFLNSTQFPDERAMVEAEFLAGELDLLYLAPERLRTEQTARLLDRGKIALFAIDEAHCVSQWGHDFRPEYLALSHLHERWPDVPRVALTATATEATRAEIAERLKLQDARHFVASFDRPNIQYRIVPKNEPKKQLLELLRTEHAGDAGIVYCLSRNSVEKTAEFLTQNGVQALPYHAGLDSETRARNQSRFLREDGLVMVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDDSEGDLAHRRRLMAHLDAMLALCEAVECRRVQLLNYFGQPAEPCGNCDTCLNPPETWDGTIAAQKVLSTIVRLRNERRQKFGAGQIIDILLGRKTAKVIQHDHDQLKVFGIGTELNESGWRGVVRQLLAQGLLAVEGEYSTLVTTPGSDEVLFQGRQVPMRREPERAARVRATRTAKGAAPQVELSAEATPVFERLRAWRAATAKEQGVPAYVIFHDATLRQIASSGPSTLAELGTVNGVGENKLAKYGQQILDTLSA
>NZ_CP034550.1|WP_051765529.1|9115430_9116369_+|HNH-endonuclease
MAVERGGNAPDVVWPLAGPGRWDGGDLVRVLETLVRYRRNGRPARHKPLALVWAIGQLVRGHDRLFEWAEFREPVGELLREFGHRDNRVTPQYPFWHLGSAPALWERHGLTGEPTAADVRSRAGFTARAAELLGDVAVRERALGVLRDVHLAGVDHAALWRRVGLSVDQPRFAVFDGTASATYRREQAWLRRLLVGDVAEARCALCGRLLPVDLLVAAHVKPRARCDPAERGDLRNVAMLACSLGCDRLYELGYLAVDERGAVLVSADDLPELRALAGRVVGAHHERSAGYFAWHREHVFRGRRGRAVGGSR
>NZ_CP034550.1|WP_051765568.1|9114171_9114450_-|HNH-endonuclease
MSTAFGYCSQAAHIRGLGRHGGPDEPANVLCLCANCHVEFDNFALYVDEDGVVRRVRDRSSVGELRRHPEHAVDERHLAYHRELCVIGPPPA
>NZ_CP034550.1|WP_051765527.1|9112653_9114162_-|ATP-binding-protein
MGELDAIEAKALATGLRKLVEQAAGLLGDGADPPLTARVRDHLGCELADVVSVATRFEVWEHVNVQRGVDAYLAAHSPDAEWFGVTGQHRGHEDVLGMLFAARQGIPYGLGAADYATTATGPDETVDVVQLGLVPTTAPDGTPVLVAVRGGTDFGPPMCRLEVLSARRAAAREVGAEVERLMREHDAFRRKVLSFGVSEHRGNELLSFLPRPTLDAADVVLPDGVLESIEQHVVGIAEHADRLLAAGQHLKRGLLLHGPPGTGKTHTVRYLMGRLRDCTVILLTGQAMRLIGNAAALARRLQPSMVVVEDVDLIAMDRGFAGGPTNPLLFALLDAMDGVGADADVTFVLTTNRADELERALADRPGRVDLAVEVPRPDAEGRRRLLELYGRGVDLRADLGPVVEATEGVTASFIKELLRRAVLGAVRAGGGGTPVVGDELVAVAREMVEQRDSLTGVLLGGAPSAAGPVGAGPAPGPGPVTGPVTGVAAVPGLAPPPKHPRS
>NZ_CP034550.1|WP_033430597.1|9112133_9112571_-|hypothetical-protein
MKPPARKSWLLLHVISSVGWLGVTVANLVLALSAFTAPHLYQAMALLGDRVVLPLALTALVTGLVLSLGTKWGLVKHKWVLAKFVVTVVAVAATTFSLRGTLHDAAAGVQGAGVSALSASCVSLALYTFATVISVFKPWGRTRWA
>NZ_CP034550.1|WP_051765533.1|9123632_9123920_+|EF-hand-domain-containing-protein
MTSVLPGAWSLIAADNSRKDWFRRTDADDMISKEEFGRFLREVWGTTAPEAVEVFTDLDEDEDERITRQQFLQSVREFYHSTDPGASGSKYFGRL
>NZ_CP034550.1|WP_033430601.1|9124016_9124196_+|hypothetical-protein
MTPRQQQARERIRLRAGERFARDEKTAVVAAELRVGVRQVEKRRRSRREGRSVTTEPKL
>NZ_CP034550.1|WP_033430602.1|9124444_9127135_+|DNRLRE-domain-containing-protein
MSALTTTVLAASGLSVAPEATASVSEVDAALEQSRRSGEPVVLPSRTTATSVTAVTPDGRFVTDITAAPVRVRAADGTWRDVDTRLVESGGALRPKAAGPDVRFSTGGSGPFAEIGFHPGTSVALRWPGALPRPVVEGDKAVYRDVAGAGGDLVVTALPAGMRFDLVLRERPAAPVEVRVPVTAVGADVRTSGGRLQVVDGDQVIVASSKAAMWDAGSPMHPDKTGDITSEVQDTADGKTLVLRPAMSFLTSPATVYPVTVDPSIVLPLTGDTDVNSVFDGNNVSGEYLKAGTEADGEKARVYLKFDTRGLTTPTKAELKLTNVDAPRCGTAVGAGLEARRITDFWSPETQTWTPQPSSTGEDAALSTEGSQLGSCGSGRMTWDLTRMVTNWAAGAAKNHGIVIQSPAETATANYRVFTSSENTEEFGTPPTLTVTTDIPFIPGEGDDPADPGPSPADQWPGRVEPETGAWVTSGTDVTEAGLLVTRSHSAGRRVDVTRPNENVLGPHWRMEPLGGMLGDRLKDFSANGYVQINLSSGTESNRYLADPARPGTFTAEDGSTVVKNADGTFTEQGTADTGLVRTWTGVGAEYLITGVTTAEGGTTTITYDAQGRVSGMASADDPAVTCTGSPACDSTVLRYATTTTATGTQFGDVAGQLKEIVHDAAGDAAPITIVSYAYDSTKRLRQVNDLRRIDGEPVATSSYTYDAAGNITQLSTPAEGAWTLTYAAPGKLSSATKAPTAELQAHCKYASQYLWGRNGCWAGPVPMEYGGRGLQPRWKRTPGNKAVVGVNNDNCTSPTGSRPKGFNFAVACDMHDYGYGIIYLKTRTWDKSKKHAVDSVFYTTLRDYTCNAYPAIKRYPGTVWSYRQLCRNWAYAYYTAVRVSGGLSMKYWRDY
>NZ_CP034550.1|WP_084716329.1|9127238_9127955_-|CHAP-domain-containing-protein
MVPGSLKDRPRCSPESGGVGQRRPRNTRTRGETTVLSRVIRVFALVAALFAVTSGAAVATAQVSAAEESTAEAEASLGAKVAAIAKRELANEDRNHEKGANNCNFYSGKAGSGSTKGCPKGWRAEAWCADFLKYVWKQAGAKTSGITPAAASLYAYGKNNKTWNSGSSIKGVKVGDAVVYELKNSGTWARHVGIVTGVSTKTGKITVISGNSGVNSKQVSSRTFTPDGSVSGYASPVS
>NZ_CP034550.1|WP_051765535.1|9127958_9130973_-|AfsR/SARP-family-transcriptional-regulator
MEEIRFNLLGQVEAWFGSRPIDLGHQRQRHVLAALLVDADRVVPAARLLERIWGEEVPVGAQGTLHSYLSRLRRLLAPVADSVRIERHPGGYAVRVDPDLVDVHRFRRLVAQARSTTGHPGDMAGLLEQALVLWRGEPFSGATSSWFTAHRDTLQREHVAARLALCDLLLRCGRDADALTIASERAAADPLDERVAGQVMLALYRLGRTADALACFDRTRRLLAEELGVDPGAALVELHRRVLAGDPELLRIEAGTTGPGPVETITWSAPASLPPDVHDFTGREGQVELLAERLVTGARAVVVLGMGGIGKTALARHVAHRIADSFPDGQLWVDLGDAEPGDVLARLLRVLGVPDRAIPVDQAERGDVFRTLLRGRAVLIVLDNAATARQVHPLLPGVGECAVLITSRAGTFRLDGVERVELDVFSAEEGMALLSKLAGAGRVAAEPAAAERIVALCGGLPLAVRIAGARLASRRTWRLDHLVGLLGDERRRLDRLAVGDLEVRASFAMSYAGLAEPERQLLRLLALVAVPDFPPWLPAVLLELPIDEATGHAEALVDAYLLTVSDADPVGQYRYRCHDLIRLFAAERADQEESTTERVRAVERALGGWLALAERLTAFVPGPCYARISGGAHRPPVDDLVPDLSPEWSDTWFDAERSALIAAVRQACGLGWTDLAFDLAGCLEKYFDLRGMYADWLAVGREVLDVCVEHGNRLGEAVMRRGLLDVTTWIATGPGDAMERMRVEARVLWDLFVELGHDEGAADAAVMHSWASTAMGRYDEAITVAEAGLALAERSGHVGGSARAELALALAFFESRRLETAIGHTHRALRHARGLGNPRVVATALQFAGIGYGEAGEFGTSKRMLDESLVIARAHRDSYTEVLSLLASARLHLEVAPSRARADAERSLALSRRYRMTHHIAQGLELLGLLMLGEGRPQDAVVHLEESVTLWRTRGWHSYHAAALESLGRAYEQVDPVAARRAFAEAREVYLRIGDTDRAARVPA
>NZ_CP034550.1|WP_033430604.1|9133077_9133350_-|hypothetical-protein
MAHTVKLKTTTFVKITEVADFASHYALARAMGLNRSTVTRVVAGSLQPGTAFIAGALTALAPLSFDDLFEIVEQPTGKAPDPTGQAGTNR
>NZ_CP034550.1|WP_153279007.1|9133235_9133712_-|DDE-type-integrase/transposase/recombinase
MARGGARRVLQPDRGLEDQRRYCDTDLVLGALEYAIWSRDVRDGQLIHHSDRGSTYTAFRFAKRLADNRILPSMGSVGDSYDNALMENFFSTLKIELVYRRSWRTRGEAEKDIAARETGTPWPTPSNSRPPPSSRSPKWRTSRPTTPWPGPWASTAPP
>NZ_CP034550.1|WP_153278704.1|9133573_9134059_-|IS3-family-transposase
MARQADPSRRERENEAITAEITDIHAVFGGTYGSPRVHQVLRRRGIRVSRKRVEWLMRQAGLQGAFLRKPWRTPSTRQDPRAAPAPDRVNRDFTAPAPDRLWGADATRIRTGEGVFWLAAVRDAFSNRIVGWKTSEGTATPTSCSVPWSTRSGPATYATAS
>NZ_CP034550.1|WP_033430605.1|9134146_9134380_-|transposase
MIRRLAEQLGVHPEALRNWIRQDEADRGERGDRPSTTESEELRRLRMENAELKRANEILKAASAFFAAEPDPTRRRS
>NZ_CP034550.1|WP_084716330.1|9134595_9136971_+|tetratricopeptide-repeat-protein
MFVSGTVQPFGWLASTRRRLDGVHGSIWTMGNHRDPDPPHVVNAMAGDVTGLFVQAGKIDGGVHYHQPARPAVEWPYRAGVVPPRAASYQERAASDLLARAVGEGDAAILTTDRPGRTSVMSGLGGVGKTQLAVDYAEQLWTASELDLLAWVTAISRDTIVSSYASLAADLTGIEDPDPEQGAQRLLAWLASTSKRWLMVLDNLRSPADLRGMWPPANHSGKVVVTTRRRDAALHGHRRRLIEIDVFTDAEAMAYLTARFADHEHLLDGTAVLARDLGYLPLALAQAAAFMLDRNLTCTAYQARLADRRRTLTSLLPEADGLPDEHQATVAATWSLSIEQADALEPAGLARPLLEVTSVLAPGGFPIEVLTAPPVTDMLTASTGRVIRAEEARDTLGCLHRLSLITMDPRTAHRTVQVHPLVQRVTRDAMPVRHTRTVARAAADALVRVWPDNERNPALSEVLRTNATALNDVCGEHLWRPGAHLVLIYVGFSLDARGWAAQARDHFEETLITAVDRLGPDHPDTLDIRMNLAGTRAKAGDLAGAIAEYEALLDDQQRLLGAGHVNNLIVRGNLAYWHGEYGNPSGAIAEYESLRSDLLRVFGAEHPFVFSVRNNLARFRGSVLDLNGALAEYAMLLDDLIRVLGRDHPFTMTTFGNIIGLRGVGGDPAGAFTMAQMLLTSQLSVLGPDHPDTLATRSTMARWQGMAGDPVAAATTCAQVLRERQRALGSDHPDTLMSRSNLAFWRGMAGDAAGAATACEELLADQLRVLGPNHPEIKNTREMLTRWRSRR

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Crispr_ID: NZ_CP034550_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_19

9131708-9132102

Orphan

Consensus_repeat	Method
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	PILER-CR
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CRISPRCasFinder
GTCTTCCCCGCGCGAGCGGGGNTGGCCC	CRT

6 spacers

The CRISPR arrays of NZ_CP034550_19

>merge|NZ_CP034550|19|9131708-9132102|PILER-CR,CRISPRCasFinder,CRT
GTCTTCCCCGCGCGAGCGGGGGTGGCCCCCCGCGTTGCGGCCGGGCGGGCTTGGCCGGCTGGTCTTCCCCGCGCGAGCGGGGGTGGCCCGAAGGCGTCTACATCAGCGTGCCCGCAGGCAAGGTCTTCCCCGCGCGAGCGGGGGTGGCCCCCAGACGGCCGCGCGTCCGCGCTCCGTGTCCTCGTCTTCCCCGCGCGAACGGGGGTGGCCCGCGCTGCGCGACCCGGCCCGCTTCACGCCCGCCGTCTTCCCCGCGCGAGCGGGGATGGCCCCGTGGTGACCTGGCCCTTGGTGTTGCTGGCCGCGTGCTTCTCGCGCGAGCGGGGAGTGGTCCGTACTACCGAGTGTTGGCGATCGGCGTGGACAGGTCTTCCCCATGTGAGCGGGGGCGGCCC

>NZ_CP034550|19|5|9131708-9131979|PILER-CR
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CCCGCGTTGCGGCCGGGCGGGCTTGGCCGGCTG
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	GAAGGCGTCTACATCAGCGTGCCCGCAGGCAAG
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CCAGACGGCCGCGCGTCCGCGCTCCGTGTCCTC
GTCTTCCCCGCGCGAACGGGGGTGGCCC	GCGCTGCGCGACCCGGCCCGCTTCACGCCCGCC
GTCTTCCCCGCGCGAGCGGGGATGGCCC

>NZ_CP034550|19|17|9131708-9132102|CRISPRCasFinder
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CCCGCGTTGCGGCCGGGCGGGCTTGGCCGGCTG
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	GAAGGCGTCTACATCAGCGTGCCCGCAGGCAAG
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CCAGACGGCCGCGCGTCCGCGCTCCGTGTCCTC
GTCTTCCCCGCGCGAACGGGGGTGGCCC	GCGCTGCGCGACCCGGCCCGCTTCACGCCCGCC
GTCTTCCCCGCGCGAGCGGGGATGGCCC	CGTGGTGACCTGGCCCTTGGTGTTGCTGGCCGC
GTGCTTCTCGCGCGAGCGGGGAGTGGTC	CGTACTACCGAGTGTTGGCGATCGGCGTGGACAG
GTCTTCCCCATGTGAGCGGGGGCGGCCC

>NZ_CP034550|19|7|9131708-9132040|CRT
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CCCGCGTTGCGGCCGGGCGGGCTTGGCCGGCTG
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	GAAGGCGTCTACATCAGCGTGCCCGCAGGCAAG
GTCTTCCCCGCGCGAGCGGGGGTGGCCC	CCAGACGGCCGCGCGTCCGCGCTCCGTGTCCTC
GTCTTCCCCGCGCGAACGGGGGTGGCCC	GCGCTGCGCGACCCGGCCCGCTTCACGCCCGCC
GTCTTCCCCGCGCGAGCGGGGATGGCCC	CGTGGTGACCTGGCCCTTGGTGTTGCTGGCCGC
GTGCTTCTCGCGCGAGCGGGGAGTGGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_153278705.1\|9137562_9138324_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_051765535.1\|9127958_9130973_-\|AfsR/SARP-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|276938
NZ_CP034550.1\|WP_033430601.1\|9124016_9124196_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051765533.1\|9123632_9123920_+\|EF-hand-domain-containing-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153278703.1\|9122079_9122229_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716329.1\|9127238_9127955_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|131643
NZ_CP034550.1\|WP_063741319.1\|9118183_9119107_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP034550.1\|WP_033430599.1\|9120459_9121296_+\|dioxygenase	unknown	unknown	gnl\|CDD\|238241
NZ_CP034550.1\|WP_153279008.1\|9137431_9137602_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_033430604.1\|9133077_9133350_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084716330.1\|9134595_9136971_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NZ_CP034550.1\|WP_033430602.1\|9124444_9127135_+\|DNRLRE-domain-containing-protein	unknown	unknown	gnl\|CDD\|370266
NZ_CP034550.1\|WP_033430605.1\|9134146_9134380_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP034550.1\|WP_153278706.1\|9138179_9138638_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP034550.1\|WP_153278704.1\|9133573_9134059_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_033430600.1\|9121564_9121960_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_153279007.1\|9133235_9133712_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|222853
NZ_CP034550.1\|WP_153278707.1\|9141044_9141326_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033430606.1\|9137125_9137326_-\|integrase	unknown	unknown	gnl\|CDD\|271183
NZ_CP034550.1\|WP_033430736.1\|9119511_9120339_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|131350

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_153278705.1\|9137562_9138324_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.77447e-63
NZ_CP034550.1\|WP_051765535.1\|9127958_9130973_-\|AfsR/SARP-family-transcriptional-regulator	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	7.35698e-30
NZ_CP034550.1\|WP_153279007.1\|9133235_9133712_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.09696e-27
NZ_CP034550.1\|WP_153278704.1\|9133573_9134059_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.08344e-25
NZ_CP034550.1\|WP_033430599.1\|9120459_9121296_+\|dioxygenase	gnl\|CDD\|238241	cd00421, intradiol_dioxygenase, Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear non-heme iron enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings. The members are intradiol-cleaving enzymes which break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. Catechol 1,2-dioxygenases are mostly homodimers with one catalytic ferric ion per monomer. Protocatechuate 3,4-dioxygenases form more diverse oligomers.	6.74582e-37
NZ_CP034550.1\|WP_084716329.1\|9127238_9127955_-\|CHAP-domain-containing-protein	gnl\|CDD\|131643	TIGR02594, hypothetical_protein, TIGR02594 family protein. Members of this protein family known so far are restricted to the bacteria, and for the most to the proteobacteria. The function is unknown.	5.48271e-07
NZ_CP034550.1\|WP_063741319.1\|9118183_9119107_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.49017e-13
NZ_CP034550.1\|WP_153279008.1\|9137431_9137602_-\|hypothetical-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.45834e-06
NZ_CP034550.1\|WP_084716330.1\|9134595_9136971_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	4.11082e-05
NZ_CP034550.1\|WP_033430602.1\|9124444_9127135_+\|DNRLRE-domain-containing-protein	gnl\|CDD\|370266	pfam09056, Phospholip_A2_3, Prokaryotic phospholipase A2. The prokaryotic phospholipase A2 domain is predominantly found in bacterial and fungal phospholipases, as well as various hypothetical and putative proteins. It enables the liberation of fatty acids and lysophospholipid by hydrolysing the 2-ester bond of 1,2-diacyl-3-sn-phosphoglycerides. The domain adopts an alpha-helical secondary structure, consisting of five alpha-helices and two helical segments.	5.46351e-11
NZ_CP034550.1\|WP_153278706.1\|9138179_9138638_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	4.34988e-09
NZ_CP034550.1\|WP_033430606.1\|9137125_9137326_-\|integrase	gnl\|CDD\|271183	cd01182, INT_RitC_C_like, C-terminal catalytic domain of recombinase RitC, a component of the recombinase trio. Recombinases belonging to the RitA (also known as pAE1 due to its presence in the deletion prone region of plasmid pAE1 of Alcaligenes eutrophus H1), RitB, and RitC families are associated in a complex referred to as a Recombinase in Trio (RIT) element. These RIT elements consist of three adjacent and unidirectional overlapping genes, one from each family (ritABC in order of transcription). All three integrases contain a catalytic motif, suggesting that they are all active enzymes. However, their specific roles are not yet fully understood. All three families belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism.	3.32191e-11
NZ_CP034550.1\|WP_033430605.1\|9134146_9134380_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.05051e-06
NZ_CP034550.1\|WP_033430736.1\|9119511_9120339_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|131350	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA. This putative transcriptional regulator, which contains both the substrate-binding, dimerization domain (pfam02311) and the helix-turn-helix DNA-binding domain (pfam00165) of the AraC famil, is located proximal to genes of the 4-hydroxyphenylacetate catabolism pathway.	3.99894e-27

>NZ_CP034550.1|WP_051765535.1|9127958_9130973_-|AfsR/SARP-family-transcriptional-regulator
MEEIRFNLLGQVEAWFGSRPIDLGHQRQRHVLAALLVDADRVVPAARLLERIWGEEVPVGAQGTLHSYLSRLRRLLAPVADSVRIERHPGGYAVRVDPDLVDVHRFRRLVAQARSTTGHPGDMAGLLEQALVLWRGEPFSGATSSWFTAHRDTLQREHVAARLALCDLLLRCGRDADALTIASERAAADPLDERVAGQVMLALYRLGRTADALACFDRTRRLLAEELGVDPGAALVELHRRVLAGDPELLRIEAGTTGPGPVETITWSAPASLPPDVHDFTGREGQVELLAERLVTGARAVVVLGMGGIGKTALARHVAHRIADSFPDGQLWVDLGDAEPGDVLARLLRVLGVPDRAIPVDQAERGDVFRTLLRGRAVLIVLDNAATARQVHPLLPGVGECAVLITSRAGTFRLDGVERVELDVFSAEEGMALLSKLAGAGRVAAEPAAAERIVALCGGLPLAVRIAGARLASRRTWRLDHLVGLLGDERRRLDRLAVGDLEVRASFAMSYAGLAEPERQLLRLLALVAVPDFPPWLPAVLLELPIDEATGHAEALVDAYLLTVSDADPVGQYRYRCHDLIRLFAAERADQEESTTERVRAVERALGGWLALAERLTAFVPGPCYARISGGAHRPPVDDLVPDLSPEWSDTWFDAERSALIAAVRQACGLGWTDLAFDLAGCLEKYFDLRGMYADWLAVGREVLDVCVEHGNRLGEAVMRRGLLDVTTWIATGPGDAMERMRVEARVLWDLFVELGHDEGAADAAVMHSWASTAMGRYDEAITVAEAGLALAERSGHVGGSARAELALALAFFESRRLETAIGHTHRALRHARGLGNPRVVATALQFAGIGYGEAGEFGTSKRMLDESLVIARAHRDSYTEVLSLLASARLHLEVAPSRARADAERSLALSRRYRMTHHIAQGLELLGLLMLGEGRPQDAVVHLEESVTLWRTRGWHSYHAAALESLGRAYEQVDPVAARRAFAEAREVYLRIGDTDRAARVPA
>NZ_CP034550.1|WP_084716329.1|9127238_9127955_-|CHAP-domain-containing-protein
MVPGSLKDRPRCSPESGGVGQRRPRNTRTRGETTVLSRVIRVFALVAALFAVTSGAAVATAQVSAAEESTAEAEASLGAKVAAIAKRELANEDRNHEKGANNCNFYSGKAGSGSTKGCPKGWRAEAWCADFLKYVWKQAGAKTSGITPAAASLYAYGKNNKTWNSGSSIKGVKVGDAVVYELKNSGTWARHVGIVTGVSTKTGKITVISGNSGVNSKQVSSRTFTPDGSVSGYASPVS
>NZ_CP034550.1|WP_033430602.1|9124444_9127135_+|DNRLRE-domain-containing-protein
MSALTTTVLAASGLSVAPEATASVSEVDAALEQSRRSGEPVVLPSRTTATSVTAVTPDGRFVTDITAAPVRVRAADGTWRDVDTRLVESGGALRPKAAGPDVRFSTGGSGPFAEIGFHPGTSVALRWPGALPRPVVEGDKAVYRDVAGAGGDLVVTALPAGMRFDLVLRERPAAPVEVRVPVTAVGADVRTSGGRLQVVDGDQVIVASSKAAMWDAGSPMHPDKTGDITSEVQDTADGKTLVLRPAMSFLTSPATVYPVTVDPSIVLPLTGDTDVNSVFDGNNVSGEYLKAGTEADGEKARVYLKFDTRGLTTPTKAELKLTNVDAPRCGTAVGAGLEARRITDFWSPETQTWTPQPSSTGEDAALSTEGSQLGSCGSGRMTWDLTRMVTNWAAGAAKNHGIVIQSPAETATANYRVFTSSENTEEFGTPPTLTVTTDIPFIPGEGDDPADPGPSPADQWPGRVEPETGAWVTSGTDVTEAGLLVTRSHSAGRRVDVTRPNENVLGPHWRMEPLGGMLGDRLKDFSANGYVQINLSSGTESNRYLADPARPGTFTAEDGSTVVKNADGTFTEQGTADTGLVRTWTGVGAEYLITGVTTAEGGTTTITYDAQGRVSGMASADDPAVTCTGSPACDSTVLRYATTTTATGTQFGDVAGQLKEIVHDAAGDAAPITIVSYAYDSTKRLRQVNDLRRIDGEPVATSSYTYDAAGNITQLSTPAEGAWTLTYAAPGKLSSATKAPTAELQAHCKYASQYLWGRNGCWAGPVPMEYGGRGLQPRWKRTPGNKAVVGVNNDNCTSPTGSRPKGFNFAVACDMHDYGYGIIYLKTRTWDKSKKHAVDSVFYTTLRDYTCNAYPAIKRYPGTVWSYRQLCRNWAYAYYTAVRVSGGLSMKYWRDY
>NZ_CP034550.1|WP_033430601.1|9124016_9124196_+|hypothetical-protein
MTPRQQQARERIRLRAGERFARDEKTAVVAAELRVGVRQVEKRRRSRREGRSVTTEPKL
>NZ_CP034550.1|WP_051765533.1|9123632_9123920_+|EF-hand-domain-containing-protein
MTSVLPGAWSLIAADNSRKDWFRRTDADDMISKEEFGRFLREVWGTTAPEAVEVFTDLDEDEDERITRQQFLQSVREFYHSTDPGASGSKYFGRL
>NZ_CP034550.1|WP_153278703.1|9122079_9122229_-|hypothetical-protein
MRGSDLFLCGRVSHEAFARAWSGNTDEYAELLHRMPKVVATTRAGGTRA
>NZ_CP034550.1|WP_033430600.1|9121564_9121960_-|hypothetical-protein
MGGYTDAEGKTLRTAVYGAMVLVSVADEGEVDRESHAGIRAMAMLPPAVRGAVDAGAPELPAGSMADVEIGVLEALRESVALVSARSTAEAQAFANAVVAMCREVASADGRVGRAENAVLDKVRAALTTAR
>NZ_CP034550.1|WP_033430599.1|9120459_9121296_+|dioxygenase
MDASADGTDERRFSRKSVLRAAVAAGVALPVAMMGVPALARTVGQEGGLLEPTPMCDDGDDPTPPQTEGPYFKPNSPRRTSLVDAGTPGTRLTVTGYVFGLACQPIANALLDFWQADVNGVYDNTGFRFRGHQFTNANGAFTLSTIVPGLYPGRTRHIHVKVQAPGRPVLTTQLYFPGEPRNQTDTIFDPRLLMTVRSVGSGREAAFDFVLNVPQSSTNPTTTTTTTPSQPGGTWASGTNYVAGDQVTYGGAGYVCLQAHLAQPGWEPPNVPALWRAA
>NZ_CP034550.1|WP_033430736.1|9119511_9120339_+|helix-turn-helix-domain-containing-protein
MHRLEVPVPDAPPFAVGTFDAMGPMSRAAFPHRHTFHEIVYVTDGTGAHVVDLARWELAPPHLCVISPGQVHHWVDVRGLDGFVVLFTDDFLLDHPADRDLLRRLSGRPWLTPDEHAHHRMLGLLAELEEEYRRGADGAGSVLRALLHVLVVRAGRLSATPAAAPAPAGAVAGEFARLADRTDHGLWSVRAYAERIGVTPGYLTEVVKAATGRTPSALVREARTREAKRLLAKTDLAVRQVAARVGFADPAYFCRFFRRETGMSPGGFRRVADDR
>NZ_CP034550.1|WP_063741319.1|9118183_9119107_+|pentapeptide-repeat-containing-protein
MSGTEPHPTEPHPTDLRADCSRCFGLCCVVPAFARSSDFAIDKPARTPCPNLGADSRCGIHARLRDRGFTGCTVYDCFGAGQQVSRVTFGGVDWRDDPASAGAMFDVFPVVRRLHELQWYLTATLALAPARPVHAEAERLRAELAGLAGGTPRELLALDLDPHWGRVNELLLRASGLVRGKGRDRRGADLVGKDLRGAGMRAHGLRGAYLIGANLAGADLRLVDFTGADLRGADLSGADLTGAFYLTQAQLDSARGDRSTRLPAGLAHPAHWGGAPARQEARREAPPRGVTASRGRPAARRPGRPRR
>NZ_CP034550.1|WP_033430604.1|9133077_9133350_-|hypothetical-protein
MAHTVKLKTTTFVKITEVADFASHYALARAMGLNRSTVTRVVAGSLQPGTAFIAGALTALAPLSFDDLFEIVEQPTGKAPDPTGQAGTNR
>NZ_CP034550.1|WP_153279007.1|9133235_9133712_-|DDE-type-integrase/transposase/recombinase
MARGGARRVLQPDRGLEDQRRYCDTDLVLGALEYAIWSRDVRDGQLIHHSDRGSTYTAFRFAKRLADNRILPSMGSVGDSYDNALMENFFSTLKIELVYRRSWRTRGEAEKDIAARETGTPWPTPSNSRPPPSSRSPKWRTSRPTTPWPGPWASTAPP
>NZ_CP034550.1|WP_153278704.1|9133573_9134059_-|IS3-family-transposase
MARQADPSRRERENEAITAEITDIHAVFGGTYGSPRVHQVLRRRGIRVSRKRVEWLMRQAGLQGAFLRKPWRTPSTRQDPRAAPAPDRVNRDFTAPAPDRLWGADATRIRTGEGVFWLAAVRDAFSNRIVGWKTSEGTATPTSCSVPWSTRSGPATYATAS
>NZ_CP034550.1|WP_033430605.1|9134146_9134380_-|transposase
MIRRLAEQLGVHPEALRNWIRQDEADRGERGDRPSTTESEELRRLRMENAELKRANEILKAASAFFAAEPDPTRRRS
>NZ_CP034550.1|WP_084716330.1|9134595_9136971_+|tetratricopeptide-repeat-protein
MFVSGTVQPFGWLASTRRRLDGVHGSIWTMGNHRDPDPPHVVNAMAGDVTGLFVQAGKIDGGVHYHQPARPAVEWPYRAGVVPPRAASYQERAASDLLARAVGEGDAAILTTDRPGRTSVMSGLGGVGKTQLAVDYAEQLWTASELDLLAWVTAISRDTIVSSYASLAADLTGIEDPDPEQGAQRLLAWLASTSKRWLMVLDNLRSPADLRGMWPPANHSGKVVVTTRRRDAALHGHRRRLIEIDVFTDAEAMAYLTARFADHEHLLDGTAVLARDLGYLPLALAQAAAFMLDRNLTCTAYQARLADRRRTLTSLLPEADGLPDEHQATVAATWSLSIEQADALEPAGLARPLLEVTSVLAPGGFPIEVLTAPPVTDMLTASTGRVIRAEEARDTLGCLHRLSLITMDPRTAHRTVQVHPLVQRVTRDAMPVRHTRTVARAAADALVRVWPDNERNPALSEVLRTNATALNDVCGEHLWRPGAHLVLIYVGFSLDARGWAAQARDHFEETLITAVDRLGPDHPDTLDIRMNLAGTRAKAGDLAGAIAEYEALLDDQQRLLGAGHVNNLIVRGNLAYWHGEYGNPSGAIAEYESLRSDLLRVFGAEHPFVFSVRNNLARFRGSVLDLNGALAEYAMLLDDLIRVLGRDHPFTMTTFGNIIGLRGVGGDPAGAFTMAQMLLTSQLSVLGPDHPDTLATRSTMARWQGMAGDPVAAATTCAQVLRERQRALGSDHPDTLMSRSNLAFWRGMAGDAAGAATACEELLADQLRVLGPNHPEIKNTREMLTRWRSRR
>NZ_CP034550.1|WP_033430606.1|9137125_9137326_-|integrase
MRLLHAGVDTTVIALWLGHETATTTNVYLHADVALKQKALDRTTPLGLAPGGYQPPDTLLAFLQNL
>NZ_CP034550.1|WP_153279008.1|9137431_9137602_-|hypothetical-protein
MDFHGDWKNATGVTLAMMEWVAWYNSERLHSFCGNSPSVEYEEKFHRTAVDTGTAV
>NZ_CP034550.1|WP_153278705.1|9137562_9138324_-|IS3-family-transposase
MVEFIDTHRGRFGVEPICAVLEVSPPTFWAVKERESVPSARAVRDEWLKKEVLRVWHGPGRGLYGARKVWGQLNREGVGVVRCTVERLMRELGIAGVTASRKRPRTTLPGRDCPVDLLERDFTADAPDLRWGADITYVATAAGWVYTAFVQDLFSRRVVGWQVADHLGADLALDALDMAVWARGGSVDGLVHHSDRGVQYTSIRYAERLDQIGAARSVGSKDDSYDMPPPSRSTVSTGRNSSTSTGTGRTQRA
>NZ_CP034550.1|WP_153278706.1|9138179_9138638_-|transposase
MAPPKKYSSELRERAVHMVFELLDQGERTGMVARVADQLGVHREALRTWVRQAEVDGGKRPGTSTSDAQRIAELERENRELRRANEILKAASAYFARELDPKPPRWSSSSTPIADGSVWSRSVPCWRCRRPRFGRSKSGSRFRRLVRSGTNG
>NZ_CP034550.1|WP_153278707.1|9141044_9141326_-|hypothetical-protein
MGPVVDLDLQLGQFVESSLERFGCLVEVERQVRQRVQHVQVGLVWSSRLVGVAGVESRELIEDEAAFGLQLVVALAQALGERVVGVGALSLAQ

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Crispr_ID: NZ_CP034550_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034550_20

9896863-9897117

Orphan

Consensus_repeat	Method
ATGTCAACATTCGACATCG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP034550_20

>merge|NZ_CP034550|20|9896863-9897117|PILER-CR
CGATGTCGAATGTTGACATCTCGTGTCCAGACGCCGGCAGTTCGTGCCCGAGCGCTGACTTTCGATGTCAAATGTTGACATTGCACACTTGAGCACCGCACCTGAGCCCGTACTGAGTGCCAGCATCTCGCGTCTGCACATCGCTACCCGTTGTCGAATGTTGACATTGCACACCCGGGTTGAGTACCTATGCGGACCTTCTAAACGCCCGCACCTCACGCCCGAGAGTCAACAGCTGATGTCGAATGTTGACAT

>NZ_CP034550|20|6|9896863-9897117|PILER-CR
CGATGTCGAATGTTGACAT	CTCGTGTCCAGACGCCGGCAGTTCGTGCCCGAGCGCTGACTTT
CGATGTCAAATGTTGACAT	TGCACACTTGAGCACCGCACCTGAGCCCGTACTGAGTGCCAGCATCTCGCGTCTGCACATCGCTACC
CGTTGTCGAATGTTGACAT	TGCACACCCGGGTTGAGTACCTATGCGGACCTTCTAAACGCCCGCACCTCACGCCCGAGAGTCAACAGC
TGATGTCGAATGTTGACAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034550.1\|WP_084717238.1\|9887494_9888304_-\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP034550.1\|WP_033434732.1\|9892796_9893039_+\|DUF2630-family-protein	unknown	unknown	gnl\|CDD\|378515
NZ_CP034550.1\|WP_033434738.1\|9904394_9905015_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP034550.1\|WP_033432866.1\|9883528_9883987_+\|heme-degrading-domain-containing-protein	unknown	unknown	gnl\|CDD\|179430
NZ_CP034550.1\|WP_033434731.1\|9891235_9892633_-\|carboxypeptidase	unknown	unknown	gnl\|CDD\|349445
NZ_CP034550.1\|WP_033434734.1\|9894565_9896731_-\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NZ_CP034550.1\|WP_084717030.1\|9889294_9891052_-\|carboxypeptidase	unknown	unknown	gnl\|CDD\|349445
NZ_CP034550.1\|WP_153278768.1\|9906679_9907168_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_084717032.1\|9897607_9898405_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225113
NZ_CP034550.1\|WP_153278765.1\|9884361_9885468_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP034550.1\|WP_033434737.1\|9903495_9904341_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|235628
NZ_CP034550.1\|WP_033434733.1\|9893650_9894478_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133382
NZ_CP034550.1\|WP_033434765.1\|9900878_9901868_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP034550.1\|WP_051766808.1\|9902204_9903518_+\|DUF4173-domain-containing-protein	unknown	unknown	gnl\|CDD\|379362
NZ_CP034550.1\|WP_153278766.1\|9893454_9893616_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033432868.1\|9885741_9887370_+\|chitinase	unknown	unknown	gnl\|CDD\|119365
NZ_CP034550.1\|WP_033434735.1\|9899547_9900066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_051766809.1\|9905082_9906210_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|223740
NZ_CP034550.1\|WP_153278767.1\|9906253_9906655_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034550.1\|WP_033434736.1\|9900177_9900852_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NZ_CP034550.1\|WP_084717238.1\|9887494_9888304_-\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.7336e-16
NZ_CP034550.1\|WP_033434732.1\|9892796_9893039_+\|DUF2630-family-protein	gnl\|CDD\|378515	pfam10944, DUF2630, Protein of unknown function (DUF2630). This bacterial family of proteins have no known function.	6.09573e-26
NZ_CP034550.1\|WP_033434738.1\|9904394_9905015_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.7601e-09
NZ_CP034550.1\|WP_033432866.1\|9883528_9883987_+\|heme-degrading-domain-containing-protein	gnl\|CDD\|179430	PRK02487, PRK02487, heme-degrading domain-containing protein.	9.85964e-70
NZ_CP034550.1\|WP_033434731.1\|9891235_9892633_-\|carboxypeptidase	gnl\|CDD\|349445	cd06226, M14_CPT_like, Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins. Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.	1.77487e-104
NZ_CP034550.1\|WP_033434734.1\|9894565_9896731_-\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP034550.1\|WP_084717030.1\|9889294_9891052_-\|carboxypeptidase	gnl\|CDD\|349445	cd06226, M14_CPT_like, Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins. Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.	7.5471e-102
NZ_CP034550.1\|WP_084717032.1\|9897607_9898405_+\|GAF-domain-containing-protein	gnl\|CDD\|225113	COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms].	3.69347e-10
NZ_CP034550.1\|WP_153278765.1\|9884361_9885468_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.08671e-67
NZ_CP034550.1\|WP_033434737.1\|9903495_9904341_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|235628	PRK05855, PRK05855, SDR family oxidoreductase.	2.01223e-117
NZ_CP034550.1\|WP_033434733.1\|9893650_9894478_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133382	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BmrR and YdfL of Bacillus subtilis, and related proteins; N-terminal domain. Bmr is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. BmrR is comprised of two distinct domains that harbor a regulatory (effector-binding) site and an active (DNA-binding) site. The conserved N-terminal domain contains a winged HTH motif that mediates DNA binding, while the C-terminal domain binds coactivating, toxic compounds. BmrR shares the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	4.19795e-30
NZ_CP034550.1\|WP_033434765.1\|9900878_9901868_+\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.50093e-57
NZ_CP034550.1\|WP_051766808.1\|9902204_9903518_+\|DUF4173-domain-containing-protein	gnl\|CDD\|379362	pfam13777, DUF4173, Domain of unknown function (DUF4173). This domain of unknown function contains multiple predicted transmembrane domains.	3.08106e-66
NZ_CP034550.1\|WP_033434736.1\|9900177_9900852_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.7092e-77
NZ_CP034550.1\|WP_033432868.1\|9885741_9887370_+\|chitinase	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	1.91097e-109
NZ_CP034550.1\|WP_051766809.1\|9905082_9906210_+\|mechanosensitive-ion-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	3.04676e-18

>NZ_CP034550.1|WP_033434734.1|9894565_9896731_-|ATP-dependent-RecD-like-DNA-helicase
MGDAVLEAVLERITFANEETGYTVARVDTGRGGDLVTVVGSLLGAQPGESIRMRGRWGSHPQYGKQFVVEDYTTVLPATIQGIRRYLGSGLIKGIGPVLADRIVTHFGTAALDVIEHEPQRLVEVPKLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSLAVRIYKQYNDKAIDVVREEPYRLANDVWGIGFRTADVIAKAVGIPHDSPQRVKAGLQFTLGEATNDGNCYLPENELIAAAIKILQVDAGLVIECLAELVAEEGVVREVMPDGEPAIYLVAFHRAEISLANQLLRLLKTDDERMPAFQKVDWGKAFAWLGASLEDKQREAVQLALTRKVAVLTGGPGCGKSFTVRSIVKLALAKGARVVLAAPTGRAAKRLTELTGHEARTVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLRDVLADGGPVPNVRLTHIFRQAQQSGVVTNAHRINNGDHPIVQGLPDFFLFPAEEAEDAAALTVDVVANRIPRKFGLKPRTDVQVLAPMHRGPAGAGGLNALLQEALTPAKPDLPERRFGGRVFRVGDKVTQMRNNYEKNVFNGTVGVVTAIDVVEQRLTVRTDEEEDVDYEFGELDELTHAYAMTIHRSQGSEYPCVVIPITTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVGAGRRHTALDHRLARSL
>NZ_CP034550.1|WP_033434733.1|9893650_9894478_+|MerR-family-transcriptional-regulator
MEDVRVDRLLGIGEFARRSRLSVKALRLYERHGLLRPARVDEANGYRRYHEDQLTDARLVALLRRLDMPLAAVARIVAADEGERADLVSAYWSGVEERVAVQRGLAAHLRVVLSGGRGLSEMYRIEQREVPERVVLTEQRHLLQPELTAWIAAAWQRLTKAAEAHGGVAAPPYVVYHGEVDQDSNGPVEMCVPVNAEALPPDVASRVDPAHTEAYARLPKAQVAFPQILSAFDAVAQWIKENDRAVTDAPREVYFADWDASGPDDEVCDVAFPMR
>NZ_CP034550.1|WP_153278766.1|9893454_9893616_+|hypothetical-protein
MGAGQVAPSEPLPIPLHPAAQLTAQPIAQPTVQPTHRPASRPTHRPADHFPIT
>NZ_CP034550.1|WP_033434732.1|9892796_9893039_+|DUF2630-family-protein
MADEELIARINALVEEEHRLEGSRVGEGLSEGDARRLRDLEVALDQTWDLLRQRRARRDAGLDPDGAEPRSPGTVENYRQ
>NZ_CP034550.1|WP_033434731.1|9891235_9892633_-|carboxypeptidase
MKPRRRPLPALAVAGVAVAAVITASPTAAGPVPDVTSVLAGPTYVYKVRAPLGVAAQDLLGRGFDVLEDRDGEYLFVLGDAATGTGLEQAGFSAVVDEVLPAPQWAPPKAKAQVEAADIDETYYGGYHTVNAHWAHLDLVAQDHPDLATVVDYGDSWRKTQGSGGYDLRAVCITKKNAGDCALDPNAPKPRFFVMGQLHARELTTGDVAWRWIDHLVQGYGTDAEVTALLDTTEVWVVPIANPDGVDMVQQGGDTPRYQRKNANNTNGSNCSGTTSSQIGIDLNRNADSHWSGPGSSDNPCDQTYKGPSANSEAETQALQALWRGLYRDRRGTGVDEAAPADTTGVVVSMHSYSNLVLFPWGWTDDRHAGNDAALRGMARDMAALGGEEWEHGQPGEVLYNAAGGTDDWVYDDLGVASFVWEIGPAWGTCAGFFPAYSCQESTFWPKLLPMLVYAAKKAPSPYGG
>NZ_CP034550.1|WP_084717030.1|9889294_9891052_-|carboxypeptidase
MKSRRRSLLTLAVAGVAAAAVVSASPTTAGPAPDVTAAPAGPTYVYKVHAPLGASAQNLLGRGFDVLEDRDGEYLFVLGDATTGAGLEQAGFSAVVDEVLPAPEWAPPKAKAQVEAADINETYYGGYHTINAHWSHLDLVAQNYPDLATVVDYGDSWRKTQGSGGYDLRAVCITKKNAGDCALDPNAPKPRFFVMGQLHARELTTGDVAWRWIDHLTQGYGTNAEVTALLDTTEVWVVPIANPDGVNIVQQGGNSPRYQRKNANNTNGSNCSGTSSSQIGIDLNRNTDSHWGGAGTSSNPCDQTYKGPSANSEAETRALQALWRSLYRDRRGTGVTDAAPDDTTGVVVSMHSYANLVLFPWGWTTAYRTGNDAPLRAMARDLAGLAGSGWQYGQPGEVLYNAAGATDDWVYDDLGVASFVWEIGPSSGTCSGFLPAYSCQASTFWPKTLPMLMYAAKKAANPYGGGNPPTGCARQTNDTDVSIPDNGAAVSSGIGISACEGSASASTQVEVHVKHTYRGDLVVDLVAPDGSAYRLKSSSSDSGDDIDTTYTVNASSEARNGTWQLRVQDVYSADTGYIDSWSLTV
>NZ_CP034550.1|WP_084717238.1|9887494_9888304_-|transposase
MRYHSTTGLSPAQLRELTTRIRQVVPDPDLRRGRPPALSLHRCVLLTLVLLRHNLSQTLAADLFGVSQPTVSRIFRRFTPLIGQVLCLHTPRLPDLPARLTTVLVDGTLIPTGTRAHPDPHPTDAPRRGPHPNHNGKHRKQGLSIQVLTDRRGRLLAVLPPLPGRTHDSRAYRLSGLADLLATTVVIGDLGYQGTGVTTPRRKRPGHTRHTPTDQAWNTLLARHRWPVERAIAHLKNWKILATGYRARLAELPTIIRIVTNLEHYRLSR
>NZ_CP034550.1|WP_033432868.1|9885741_9887370_+|chitinase
MSKIRWHVTALFVAVATLVVGLAVAPAASGAGGVSATFSKGSDWGTGYEGKYTIRNNGTSALSTWTVEFDLPAGHRVSSVWDGSQTTSGQHVTVKPTWNGSVGVGASVSFGFNVSYSGAYSAPANCKLNGASCEAGGTNPTTTTTTTTTTSTTTTTTTSTTTTTTTTNPPGGKKNLGYFTQWGVYGRQYYVKNIHTSGTAAKLTHINYSFGNVQNGQCTIGDAYADYDMAYTTANSVDGVADTWDTGALRGNFNQLRKLKKMYPHIKVLFSFGGWTWSGGFGQAAQNPAAFAESCYKLVEDPRWADVFDGIDIDWEYPNACGLTCDTSGFGSFKTLSQALRNRFGANYLITAAITADGTNGGKIDAADYGGAAQYLDWYNVMTYDYFGAWAAKGPTAPHSPLTSYAGIPTEGFYSDAAIQKLKSKGVPSAKLLLGIGFYGRGWTGVTQSAPGGTATGAAPGTYEAGIEDYKVLKTKCPANGTVAGTAYAHCGSEWWSYDTPATIGGKMTYAKNQGLGGAFFWSLDGDTSNGELATAISNGLK
>NZ_CP034550.1|WP_153278765.1|9884361_9885468_-|serine-hydrolase
MRVKRGIALAAAVGLAVTGIGGTAVAAPGGDRVDRQVVQRALDEMARTGAQGAQARVVDGRREFTARAGTAEVGSPRPVPTDGRFRVGSVTKTFVATVVLQLVGEGRVELDAPVSRYLPGLLPDGDRITVRHLLQHTSGLYNYTQDLPLDPDGYEAIRYKTWTPAELVALATAKPLDFQPGTGWNYSNTNYVVVGMLVERVTGRPYGDAVAQRVLRPLGLRDTSVPGTRVQVPGPHAHGYVRVAGEVADITEINPSVAYSAGEMISTTEDLGRFVDALLDGRLLRPAQQRELLTTVQAGPGQGYGLGIESTELPCGVTVWGHGGGIPGYSTLMMSTADTKTRLTASVTSAPDPGPVNGADQLLEEVFC
>NZ_CP034550.1|WP_033432866.1|9883528_9883987_+|heme-degrading-domain-containing-protein
MSLLEELAEQEAKLVFTSFDNEVALDLGAFLLDAARSAGLPVTISVRRGRQRLFHAALPGTSADNDEWIDRKSRVVDRYGQSSYRVGEGFRARGTTFEESSRLDPDRYAAHGGVFPVTVAGVGVVGTVGVSGLPQAEDHAFVVEQLGRFLAR
>NZ_CP034550.1|WP_084717032.1|9897607_9898405_+|GAF-domain-containing-protein
MAAVRRYHILDAPADGSFESVARVAALAFGTPIATVTIVDVDRVWFAACHGLSGVTQIGTEPGLCASAVLQDEAYVVNDGAIDPRTLDHPLVRGELGLRFYAAAPIITGDGHRLGTVNVIDREPREVTDAQVATLTALAGIVADQLELRLAAIQAVRAERGLDEASGVHATASAKLAGQLRHLAAGHLDGEHPRTCQLGLSSPCDNPVEVKVADPWGDSAWGCIRHAEDVIINERSTFIADEKLNGLERYLRAAKHRAAGPVRTP
>NZ_CP034550.1|WP_033434735.1|9899547_9900066_-|hypothetical-protein
MGGAWAAVGCGTLLAAPVLVGGLLLGVPVTSWWFPVCLAVPFLAPAVTGARAYRGQPREAEFTAAGVRLRKGWSTRWLDADDLVKVIVTHTGGPGERSGTTLYLLPRGEQPLMIPGHRDTRVPDALTALLGPKVREEWRVRPDPRDGTSSDDDGNGDAGGGGDDADGDGGDA
>NZ_CP034550.1|WP_033434736.1|9900177_9900852_+|response-regulator-transcription-factor
MTRRVLVVEDDLTIAESVAARLRAEGFEVELAHDGPSAVARAVNADLVVLDVMLPGFDGLEVCRRIQAQRPVPVLMLTARGDETDLLVGLAVGADDYLTKPFSIRELAARVHALLRRVERAASAAANRIAVADLEIDLAERRVLRGGTEAHLTPTEFELLVHLAERPRAVQSRERLLNEVWGWHDGLGAGTRTVDSHIKALRRKLGTDLIRTVHGVGYALEVPR
>NZ_CP034550.1|WP_033434765.1|9900878_9901868_+|HAMP-domain-containing-protein
MELLPRPLDPVRSIKLKLCILLLAAFAAGFAFFWYQIGWLPPTTTIGTMAIVVVTSQVLAHGMTRPLREMTAAVRAMRDGDYSRRVRATARDEVGELASAFNRMAADIGAADRQRRELIANVSHELRTPITALQNVLENVVDGVAQPDAATMRTALAQTERLGRLVAELLDLSRIDAGAHRLDKAEFPLEPLLTDVVAEVSVAARGVRFAVDVSPPGAVVYADEARLAQVVANLLDNAARHGPAGGEVRITAAVGRELVLEVADDGPGIAPQDRERVFERFTRGERAGGGGTGLGLNIARWVVDLHGGTIAVVDGPGCRIRATLPAAAT
>NZ_CP034550.1|WP_051766808.1|9902204_9903518_+|DUF4173-domain-containing-protein
MSPTRVLLTATAAGTAAALLITLDRPGLGWPLTAALVFVLLGGRVTPVWATLSTALFAVSAITASEWLFTLCATAGCAAASLAVVGGRTARGLVFGMAAVPGAAFRAIPWLAKHLKQNGAPRTRPALITLALLTVFVPLLAGADPTFAGLLTSLLPHTSAEPVLLFTAVALGTLGACHLLVVPVVLDDDVSGRRRIGRREWVLPVGALVVLFAAFVAVQVATLFGGDDHVRTTADLTYAQYARSGFWQLLAVTVLTLAVIGTVAYLAAPEDHRPLRLLLGALGALTLVIVASALTRMWLYQQAYGFTVLRVLVSAFELWLGVVYLLVLAAGVRMAGAWLPRAVLACGFVALLGLAALNPDRFIAERNVARWQETGRIDASYLGRLSDDAVPALLVLPDDLRVCRDHPAEDDWRTWNLGRERARRALAERPVSACSRR
>NZ_CP034550.1|WP_033434737.1|9903495_9904341_-|alpha/beta-fold-hydrolase
MRGATVHVESGGVRLAVFEQGDRSAPTVLLVHGYPDTHRVWDGVAAVLAERFHVVTYDVRGAGASGAPRGLAPYRLPELGRDLLAVARAVSPDAPVHVVGHDWGSIQAWEAVTTPGAPIASYTSISGPCLDHVGHRMRQRSDLNQLRRSWYIAAFHLPLVAPLVWRHLVGPRWGALLRRLEGVNAPVAPTVVEDGVRGMALYRANFIPRLRAPRERRTDVPVQLVQPLRDRYVTAAVNDGVERWAPDLRRRVVDAGHWAPVTHARTIALMIADHVTGVSTR
>NZ_CP034550.1|WP_033434738.1|9904394_9905015_+|TetR/AcrR-family-transcriptional-regulator
MGTTRRKYAPRLPPEQRREQLLDGALALIAGGGFDALTMEAVARRAGVTKPVVYELYANRAEVIAALLQREAERATAQVLGSIPPAGSADRPPADAYADGVRAFLTSVVEHPDRWRLVLLPPEGTPPEFRVHVELVRARVLAQVSTLADVGLRARGEADPDAELLGHAMLALAEMAGRLAITDPARFPTDRLVSFVAKIAHVLPNG
>NZ_CP034550.1|WP_051766809.1|9905082_9906210_+|mechanosensitive-ion-channel
MLAAVLTFAGSLLVALVVVTLVHRVVGRLARRSGVFAGLARYAHKPALATAVLVAVQFSLGVVASGDWRPVALHLTGIALILAGAWLLAALLVVIEDATLARIRVDVSDNRHARRVHTQITLIRRVTVVVVGVLAMAAVLMTFPEARAAGTSILASAGVIGAIAALAAQSLLGNVFSGVQLAFSDAVRLDDVVVVEGQWGRIEDITLTYVVVHLWDDRRMILPTSHFMKTPFENWTRTQSALLGTVELDLDWTVPVEDMRQELRHALEGCDLWDGRVSVLQVTEAVGSFVRVRALVSASDAGRLWDLRCVVREHLVSWLRSRHPNALPQVRVHDLPRAGRVFERAASGASDNRVFGDSADGQERVQAFMGPEQPR
>NZ_CP034550.1|WP_153278767.1|9906253_9906655_+|hypothetical-protein
MRKLVVACLALALVGCGRAAVPGDLPTVVSVVTPAVTVPSSTGPLGPQASAALGRAAEAGASTVGVTVSTEPGLLKQVVAGLRALGATVDTPDGAVDHVRATVPVDAVARVPALEGVRQVDVDEPLSNGDPTP
>NZ_CP034550.1|WP_153278768.1|9906679_9907168_-|hypothetical-protein
MRASDGAFSPRDGFTADAGFYAVGTRVSDSLNMRGSLVTGPEDRHRRSAVEPFRARVGDLFPPDAGFRGGVFAAGVTVARNARLQGVEPARWLRGLHGLFVGYGYRAAGAIPWLLPAVVLATWPIHTHGDLPVTRAASAGQAPTRVVDLSWSESFRSTLDSR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP034550_4	4.1\|2452834\|18\|NZ_CP034550\|CRT	2452834-2452851	18	NZ_CP034550.1	6428171-6428188	0	1.0
NZ_CP034550_4	4.3\|2452906\|18\|NZ_CP034550\|CRT	2452906-2452923	18	NZ_CP034550.1	6428171-6428188	0	1.0
NZ_CP034550_6	6.1\|3226080\|36\|NZ_CP034550\|CRISPRCasFinder	3226080-3226115	36	NZ_CP034550.1	2909600-2909635	0	1.0
NZ_CP034550_10	10.2\|4341380\|20\|NZ_CP034550\|CRISPRCasFinder	4341380-4341399	20	NZ_CP034550.1	4341305-4341324	1	0.95
NZ_CP034550_10	10.1\|4341335\|20\|NZ_CP034550\|CRISPRCasFinder	4341335-4341354	20	NZ_CP034550.1	424156-424175	2	0.9
NZ_CP034550_10	10.1\|4341335\|20\|NZ_CP034550\|CRISPRCasFinder	4341335-4341354	20	NZ_CP034550.1	7234869-7234888	2	0.9

1. spacer 4.1|2452834|18|NZ_CP034550|CRT matches to position: 6428171-6428188, mismatch: 0, identity: 1.0

gccgccggcggggttgtc	CRISPR spacer
gccgccggcggggttgtc	Protospacer
******************

2. spacer 4.3|2452906|18|NZ_CP034550|CRT matches to position: 6428171-6428188, mismatch: 0, identity: 1.0

gccgccggcggggttgtc	CRISPR spacer
gccgccggcggggttgtc	Protospacer
******************

3. spacer 6.1|3226080|36|NZ_CP034550|CRISPRCasFinder matches to position: 2909600-2909635, mismatch: 0, identity: 1.0

ccggtcccacaccgcgtcgcggccggcggccagctc	CRISPR spacer
ccggtcccacaccgcgtcgcggccggcggccagctc	Protospacer
************************************

4. spacer 10.2|4341380|20|NZ_CP034550|CRISPRCasFinder matches to position: 4341305-4341324, mismatch: 1, identity: 0.95

ctcgaacgaccggggcccga	CRISPR spacer
ctcggacgaccggggcccga	Protospacer
****.***************

5. spacer 10.1|4341335|20|NZ_CP034550|CRISPRCasFinder matches to position: 424156-424175, mismatch: 2, identity: 0.9

gccggggcgccggggcctgg	CRISPR spacer
gctggggcgcctgggcctgg	Protospacer
**.******** ********

6. spacer 10.1|4341335|20|NZ_CP034550|CRISPRCasFinder matches to position: 7234869-7234888, mismatch: 2, identity: 0.9

gccggggcgccggggcctgg	CRISPR spacer
gccggggcgccggtgccggg	Protospacer
************* *** **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP034550_10	10.1\|4341335\|20\|NZ_CP034550\|CRISPRCasFinder	4341335-4341354	20	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	467901-467920	1	0.95
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_004808	Streptomyces rochei plasmid pSLA2-L DNA, complete sequence	74600-74624	2	0.92
NZ_CP034550_17	17.1\|9020431\|24\|NZ_CP034550\|CRT	9020431-9020454	24	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1231555-1231578	2	0.917
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	5152-5176	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	5159-5183	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	5158-5182	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	5166-5190	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	5160-5184	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	MT897906	Arthrobacter phage Tweety19, complete genome	31119-31143	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP047174	Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence	100190-100214	3	0.88
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3754941-3754965	3	0.88
NZ_CP034550_17	17.4\|9020430\|26\|NZ_CP034550\|CRISPRCasFinder	9020430-9020455	26	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1231554-1231579	3	0.885
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	MN693876	Marine virus AFVG_250M699, complete genome	14158-14184	4	0.852
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	KT997855	Uncultured Mediterranean phage uvDeep-CGR2-AD12-C183, complete genome	15643-15669	4	0.852
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NZ_CP013105	Paraburkholderia caribensis strain MWAP64 plasmid 2, complete sequence	206328-206354	4	0.852
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NZ_CP041223	Porphyrobacter sp. YT40 plasmid pYT40, complete sequence	68512-68538	4	0.852
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NZ_CP010016	Burkholderia thailandensis 34 plasmid unnamed, complete sequence	139015-139041	4	0.852
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	236540-236564	4	0.84
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP014519	Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence	16970-16994	4	0.84
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_008271	Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence	296000-296024	4	0.84
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	475276-475300	4	0.84
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	564033-564057	4	0.84
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	103268-103292	4	0.84
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	158270-158296	5	0.815
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	81625-81651	5	0.815
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	MG099941	Gordonia phage Bjanes7, complete genome	4561-4587	5	0.815
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	MT771342	Gordonia phage Matteo, complete genome	4561-4587	5	0.815
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NC_041883	Gordonia phage Attis, complete genome	4561-4587	5	0.815
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	MK801734	Gordonia phage LordFarquaad, complete genome	4561-4587	5	0.815
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NC_031251	Gordonia phage SoilAssassin, complete genome	4561-4587	5	0.815
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NZ_CP047174	Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence	110330-110354	5	0.8
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	701861-701885	5	0.8
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1111217-1111241	5	0.8
NZ_CP034550_12	12.8\|5920525\|25\|NZ_CP034550\|CRT	5920525-5920549	25	AB452989	Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds	3501-3525	5	0.8
NZ_CP034550_17	17.4\|9020430\|26\|NZ_CP034550\|CRISPRCasFinder	9020430-9020455	26	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	212226-212251	5	0.808
NZ_CP034550_17	17.4\|9020430\|26\|NZ_CP034550\|CRISPRCasFinder	9020430-9020455	26	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	136215-136240	5	0.808
NZ_CP034550_17	17.5\|9020480\|26\|NZ_CP034550\|CRISPRCasFinder,PILER-CR	9020480-9020505	26	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	725309-725334	5	0.808
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MT723934	Gordonia phage Love, complete genome	6501-6534	5	0.853
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	NC_042108	Gordonia phage Brandonk123, complete genome	6404-6437	5	0.853
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH976514	Gordonia phage Nordenberg, complete genome	4035-4068	5	0.853
NZ_CP034550_5	5.1\|2853004\|27\|NZ_CP034550\|CRISPRCasFinder	2853004-2853030	27	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	552442-552468	6	0.778
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3016160-3016189	6	0.8
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	NZ_HG938357	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence	88835-88864	6	0.8
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	NC_048094	Arthrobacter phage Eileen, complete genome	34007-34036	6	0.8
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	NC_048095	Arthrobacter phage Judy, complete genome	37292-37321	6	0.8
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	MH834603	Arthrobacter phage Bridgette, complete genome	36832-36861	6	0.8
NZ_CP034550_17	17.3\|9020531\|26\|NZ_CP034550\|CRT	9020531-9020556	26	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	282196-282221	6	0.769
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP051472	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence	102350-102382	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP012965	Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence	101797-101829	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	CP047035	Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence	101938-101970	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP047041	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence	101871-101903	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP015214	Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence	11843-11875	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP030275	Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence	85017-85049	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP015292	Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence	29555-29587	6	0.818
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	186160-186192	6	0.818
NZ_CP034550_3	3.1\|2070570\|33\|NZ_CP034550\|CRISPRCasFinder	2070570-2070602	33	NZ_CP010894	Pseudomonas sp. MRSN12121 plasmid, complete sequence	18166-18198	7	0.788
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	248439-248468	7	0.767
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	6333-6366	7	0.794
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	318316-318349	7	0.794
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NC_019410	Caulobacter phage CcrKarma, complete genome	6272-6304	7	0.788
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NC_019410	Caulobacter phage CcrKarma, complete genome	217846-217878	7	0.788
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	372772-372804	7	0.788
NZ_CP034550_6	6.7\|3226511\|35\|NZ_CP034550\|CRISPRCasFinder	3226511-3226545	35	NC_022049	Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence	97452-97486	8	0.771
NZ_CP034550_9	9.1\|4155157\|30\|NZ_CP034550\|CRT	4155157-4155186	30	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	739958-739987	8	0.733
NZ_CP034550_11	11.1\|4730641\|31\|NZ_CP034550\|CRISPRCasFinder	4730641-4730671	31	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	47632-47662	8	0.742
NZ_CP034550_11	11.1\|4730641\|31\|NZ_CP034550\|CRISPRCasFinder	4730641-4730671	31	NZ_CP046903	Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence	164898-164928	8	0.742
NZ_CP034550_12	12.3\|5920255\|31\|NZ_CP034550\|CRT	5920255-5920285	31	NZ_CP015203	Rhodococcus sp. 008 plasmid pR8L1, complete sequence	492752-492782	8	0.742
NZ_CP034550_18	18.2\|9122730\|33\|NZ_CP034550\|PILER-CR	9122730-9122762	33	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	745287-745319	8	0.758
NZ_CP034550_18	18.9\|9123157\|33\|NZ_CP034550\|PILER-CR	9123157-9123189	33	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	453789-453821	8	0.758
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MK460247	Mycobacterium phage YoureAdopted, complete genome	11282-11315	8	0.765
NZ_CP034550_18	18.14\|9122725\|33\|NZ_CP034550\|CRISPRCasFinder,CRT	9122725-9122757	33	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	745287-745319	8	0.758
NZ_CP034550_18	18.21\|9123152\|33\|NZ_CP034550\|CRISPRCasFinder,CRT	9123152-9123184	33	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	453789-453821	8	0.758
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NZ_MF600313	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence	259343-259375	8	0.758
NZ_CP034550_19	19.5\|9131980\|33\|NZ_CP034550\|CRISPRCasFinder,CRT	9131980-9132012	33	NZ_CP041042	Paracoccus sp. AK26 plasmid pAK4, complete sequence	84563-84595	8	0.758
NZ_CP034550_6	6.7\|3226511\|35\|NZ_CP034550\|CRISPRCasFinder	3226511-3226545	35	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	229995-230029	9	0.743
NZ_CP034550_6	6.7\|3226511\|35\|NZ_CP034550\|CRISPRCasFinder	3226511-3226545	35	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1353954-1353988	9	0.743
NZ_CP034550_6	6.7\|3226511\|35\|NZ_CP034550\|CRISPRCasFinder	3226511-3226545	35	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	819275-819309	9	0.743
NZ_CP034550_6	6.19\|3226153\|34\|NZ_CP034550\|PILER-CR	3226153-3226186	34	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	598863-598896	9	0.735
NZ_CP034550_11	11.1\|4730641\|31\|NZ_CP034550\|CRISPRCasFinder	4730641-4730671	31	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	419675-419705	9	0.71
NZ_CP034550_11	11.1\|4730641\|31\|NZ_CP034550\|CRISPRCasFinder	4730641-4730671	31	LR606150	Rhizobium sp. Q54 genome assembly, plasmid: 7	113048-113078	9	0.71
NZ_CP034550_12	12.3\|5920255\|31\|NZ_CP034550\|CRT	5920255-5920285	31	NZ_CP032328	Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence	61348-61378	9	0.71
NZ_CP034550_12	12.3\|5920255\|31\|NZ_CP034550\|CRT	5920255-5920285	31	NZ_CP054608	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence	23087-23117	9	0.71
NZ_CP034550_12	12.3\|5920255\|31\|NZ_CP034550\|CRT	5920255-5920285	31	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	29026-29056	9	0.71
NZ_CP034550_18	18.3\|9122791\|33\|NZ_CP034550\|PILER-CR	9122791-9122823	33	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	171788-171820	9	0.727
NZ_CP034550_18	18.6\|9122974\|33\|NZ_CP034550\|PILER-CR	9122974-9123006	33	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	171788-171820	9	0.727
NZ_CP034550_18	18.11\|9123279\|33\|NZ_CP034550\|PILER-CR	9123279-9123311	33	NZ_CP013108	Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence	54511-54543	9	0.727
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN234205	Mycobacterium phage Veliki, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH727544	Mycobacterium phage Dalmuri, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	JF704105	Mycobacterium phage Adephagia, complete sequence	11312-11345	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN234198	Mycobacterium phage Zavala, complete genome	11290-11323	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MF140412	Mycobacterium phage Jeckyll, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	KY380102	Mycobacterium phage CREW, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	KX585253	Mycobacterium phage HedwigODU, complete genome	11312-11345	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN234230	Mycobacterium phage Atiba, complete genome	11275-11308	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MF140430	Mycobacterium phage Tachez, complete genome	11275-11308	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MF140428	Mycobacterium phage Slimphazie, complete genome	11313-11346	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	KJ567045	Mycobacterium phage Emerson, complete genome	11309-11342	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	JN185608	Mycobacterium virus JAWS, complete genome	11303-11336	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN234231	Mycobacterium phage Rapunzel97, complete genome	11313-11346	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	NC_014458	Mycobacterium phage Angelica, complete genome	11283-11316	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN908692	Mycobacterium Phage BGlluviae, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	NC_023747	Mycobacterium phage BarrelRoll, complete genome	11301-11334	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MG962364	Mycobacterium phage Deby, complete genome	11283-11316	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH536821	Mycobacterium phage Homura, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MF668267	Mycobacterium phage Apocalypse, complete genome	11286-11319	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH697578	Mycobacterium phage Belladonna, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH077577	Mycobacterium phage AlishaPH, complete genome	11308-11341	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MF919532	Mycobacterium phage Sulley, complete genome	11282-11315	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH509444	Mycobacterium phage BEEST, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN369742	Mycobacterium phage Spock, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MK112537	Mycobacterium Phage Capricorn, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN369746	Mycobacterium phage Inky, complete genome	11349-11382	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH051246	Mycobacterium phage ActinUp, complete genome	11312-11345	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH513977	Mycobacterium phage Mynx, complete genome	11332-11365	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MN234197	Mycobacterium phage Ramen, complete genome	11312-11345	9	0.735
NZ_CP034550_18	18.13\|9122663\|34\|NZ_CP034550\|CRISPRCasFinder,CRT	9122663-9122696	34	MH371113	Mycobacterium phage Beezoo, complete genome	11325-11358	9	0.735
NZ_CP034550_18	18.15\|9122786\|33\|NZ_CP034550\|CRISPRCasFinder,CRT	9122786-9122818	33	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	171788-171820	9	0.727
NZ_CP034550_18	18.18\|9122969\|33\|NZ_CP034550\|CRISPRCasFinder,CRT	9122969-9123001	33	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	171788-171820	9	0.727
NZ_CP034550_18	18.23\|9123274\|33\|NZ_CP034550\|CRISPRCasFinder,CRT	9123274-9123306	33	NZ_CP013108	Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence	54511-54543	9	0.727
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NC_019408	Caulobacter phage CcrRogue, complete genome	6372-6404	9	0.727
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NC_019408	Caulobacter phage CcrRogue, complete genome	219771-219803	9	0.727
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	MH588544	Caulobacter phage CcrBL10, complete genome	5917-5949	9	0.727
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	MH588544	Caulobacter phage CcrBL10, complete genome	217142-217174	9	0.727
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NC_019411	Caulobacter phage CcrSwift, complete genome	5947-5979	9	0.727
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NC_019411	Caulobacter phage CcrSwift, complete genome	215192-215224	9	0.727
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	493969-494001	9	0.727
NZ_CP034550_6	6.1\|3226080\|36\|NZ_CP034550\|CRISPRCasFinder	3226080-3226115	36	JX006077	Saccharomonospora phage PIS 136, complete genome	27709-27744	10	0.722
NZ_CP034550_6	6.24\|3226585\|37\|NZ_CP034550\|PILER-CR	3226585-3226621	37	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	614699-614735	10	0.73
NZ_CP034550_6	6.24\|3226585\|37\|NZ_CP034550\|PILER-CR	3226585-3226621	37	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1198364-1198400	10	0.73
NZ_CP034550_11	11.1\|4730641\|31\|NZ_CP034550\|CRISPRCasFinder	4730641-4730671	31	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	97871-97901	10	0.677
NZ_CP034550_19	19.1\|9131736\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131736-9131768	33	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	232603-232635	10	0.697
NZ_CP034550_19	19.3\|9131858\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131858-9131890	33	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	44463-44495	10	0.697
NZ_CP034550_19	19.3\|9131858\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131858-9131890	33	NZ_CP047317	Burkholderia glumae AU6208 plasmid pwszb, complete sequence	50293-50325	10	0.697
NZ_CP034550_19	19.3\|9131858\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131858-9131890	33	NZ_CP007214	Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence	76069-76101	10	0.697
NZ_CP034550_19	19.3\|9131858\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131858-9131890	33	NZ_CP009433	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence	155198-155230	10	0.697
NZ_CP034550_19	19.3\|9131858\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131858-9131890	33	NC_012720	Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence	72973-73005	10	0.697
NZ_CP034550_19	19.3\|9131858\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131858-9131890	33	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	117831-117863	10	0.697
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NZ_KP289281	Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence	95509-95541	10	0.697
NZ_CP034550_19	19.4\|9131919\|33\|NZ_CP034550\|PILER-CR,CRISPRCasFinder,CRT	9131919-9131951	33	NC_004956	Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence	95509-95541	10	0.697

1. spacer 10.1|4341335|20|NZ_CP034550|CRISPRCasFinder matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 1, identity: 0.95

gccggggcgccggggcctgg	CRISPR spacer
gccggggcgccggggcctga	Protospacer
*******************.

2. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_004808 (Streptomyces rochei plasmid pSLA2-L DNA, complete sequence) position: , mismatch: 2, identity: 0.92

gccctcgccggagccgccggtgtcg	CRISPR spacer
gtcctcggcggagccgccggtgtcg	Protospacer
*.***** *****************

3. spacer 17.1|9020431|24|NZ_CP034550|CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 2, identity: 0.917

ccccgcgaaccgcttgacctgccg	CRISPR spacer
ccccgcgaaccgcttgacctgctc	Protospacer
**********************.

4. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gttctcgccggtgccgccggtgtcg	Protospacer
*..******** *************

5. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gttctcgccggtgccgccggtgtcg	Protospacer
*..******** *************

6. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gttctcgccggtgccgccggtgtcg	Protospacer
*..******** *************

7. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gttctcgccggtgccgccggtgtcg	Protospacer
*..******** *************

8. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gttctcgccggtgccgccggtgtcg	Protospacer
*..******** *************

9. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to MT897906 (Arthrobacter phage Tweety19, complete genome) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gccctcgccggagccgcccttgtcc	Protospacer
******************  ****

10. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gccctcggcggagccgtcggtgtag	Protospacer
******* ********.****** *

11. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.88

gccctcgccggagccgccggtgtcg	CRISPR spacer
gcccgcgctggagccgccggtgttg	Protospacer
**** ***.**************.*

12. spacer 17.4|9020430|26|NZ_CP034550|CRISPRCasFinder matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 3, identity: 0.885

gccccgcgaaccgcttgacctgccgg	CRISPR spacer
gccccgcgaaccgcttgacctgctcc	Protospacer
***********************.

13. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to MN693876 (Marine virus AFVG_250M699, complete genome) position: , mismatch: 4, identity: 0.852

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgccgatgcggcgagtgcgcctg	Protospacer
****** ************.*****..

14. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to KT997855 (Uncultured Mediterranean phage uvDeep-CGR2-AD12-C183, complete genome) position: , mismatch: 4, identity: 0.852

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgccgatgcggcgagtgcgcctg	Protospacer
****** ************.*****..

15. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NZ_CP013105 (Paraburkholderia caribensis strain MWAP64 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.852

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cgactgacgatgcggcaagcgcgcgct	Protospacer
**.*************.******* *

16. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NZ_CP041223 (Porphyrobacter sp. YT40 plasmid pYT40, complete sequence) position: , mismatch: 4, identity: 0.852

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggccgacgaggcggcgagcgcgacga	Protospacer
****.***** ************ * *

17. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NZ_CP010016 (Burkholderia thailandensis 34 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

---cggctgacgatgcggcgagcgcgccca	CRISPR spacer
acccggc---cgatgcggcgagcgcgcccg	Protospacer
   ****   *******************.

18. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 4, identity: 0.84

gccctcgccggagccgccggtgtcg	CRISPR spacer
gccctcgtcggagccgccggtgatc	Protospacer
*******.************** .

19. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP014519 (Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence) position: , mismatch: 4, identity: 0.84

gccctcgccggagccgccggtgtcg	CRISPR spacer
gccctcgccggagccgccggatacc	Protospacer
********************   *

20. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_008271 (Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence) position: , mismatch: 4, identity: 0.84

gccctcgccggagccgccggtgtcg	CRISPR spacer
cacgtcgacggagccgccggtgtcg	Protospacer
  * *** *****************

21. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 4, identity: 0.84

gccctcgccggagccgccggtgtcg	CRISPR spacer
accctcgccggagccgccggagcca	Protospacer
.******************* *.*.

22. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 4, identity: 0.84

gccctcgccggagccgccggtgtcg	CRISPR spacer
gccctcgccggcgccgccggggtga	Protospacer
*********** ******** ** .

23. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 4, identity: 0.84

gccctcgccggagccgccggtgtcg	CRISPR spacer
gccctcgccggggccgccggagtga	Protospacer
***********.******** ** .

24. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacggtgcggggagcgcgggcg	Protospacer
*********.***** *******  *.

25. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacggtgcggggagcgcgggcg	Protospacer
*********.***** *******  *.

26. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to MG099941 (Gordonia phage Bjanes7, complete genome) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacgatgcggcgaccgtgtcgt	Protospacer
****************** **.*.*

27. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to MT771342 (Gordonia phage Matteo, complete genome) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacgatgcggcgaccgtgtcgt	Protospacer
****************** **.*.*

28. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NC_041883 (Gordonia phage Attis, complete genome) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacgatgcggcgaccgtgtcgt	Protospacer
****************** **.*.*

29. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to MK801734 (Gordonia phage LordFarquaad, complete genome) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacgatgcggcgaccgtgtcgt	Protospacer
****************** **.*.*

30. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NC_031251 (Gordonia phage SoilAssassin, complete genome) position: , mismatch: 5, identity: 0.815

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacgatgcggcgaccgtgtcgt	Protospacer
****************** **.*.*

31. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

gccctcgccggagccgccggtgtcg	CRISPR spacer
cggatcgccggagccgccggggtcg	Protospacer
    **************** ****

32. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 5, identity: 0.8

gccctcgccggagccgccggtgtcg	CRISPR spacer
gcccccgccggagccgccggtcggc	Protospacer
****.****************

33. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 5, identity: 0.8

gccctcgccggagccgccggtgtcg	CRISPR spacer
gcccccgccggagccgccggtcggc	Protospacer
****.****************

34. spacer 12.8|5920525|25|NZ_CP034550|CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 5, identity: 0.8

gccctcgccggagccgccggtgtcg	CRISPR spacer
gttatcgccggagccgccggtgttc	Protospacer
*.. *******************.

35. spacer 17.4|9020430|26|NZ_CP034550|CRISPRCasFinder matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 5, identity: 0.808

gccccgcgaaccgcttgacctgccgg	CRISPR spacer
cagccgcgcaccgctggacctgccgg	Protospacer
   ***** ****** **********

36. spacer 17.4|9020430|26|NZ_CP034550|CRISPRCasFinder matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.808

gccccgcgaaccgcttgacctgccgg	CRISPR spacer
cttccgcgaaccgctggccctgccgg	Protospacer
 ..************ * ********

37. spacer 17.5|9020480|26|NZ_CP034550|CRISPRCasFinder,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.808

gttccgcaggatcaacccggcggggc	CRISPR spacer
acaccgcaggatcaacgcgtcggggc	Protospacer
.. ************* ** ******

38. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MT723934 (Gordonia phage Love, complete genome) position: , mismatch: 5, identity: 0.853

cacgttgtcgtcggcccact---cgtcggggcgcaag	CRISPR spacer
cacgttgtcgacggcccactcggcgtcggcgcgc---	Protospacer
********** *********   ****** ****

39. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to NC_042108 (Gordonia phage Brandonk123, complete genome) position: , mismatch: 5, identity: 0.853

cacgttgtcgtcggcccact---cgtcggggcgcaag	CRISPR spacer
cacgttgtcgacggcccactcggcgtcggcgcgc---	Protospacer
********** *********   ****** ****

40. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH976514 (Gordonia phage Nordenberg, complete genome) position: , mismatch: 5, identity: 0.853

cacgttgtcgtcggcccact---cgtcggggcgcaag	CRISPR spacer
cacgttgtcgacggcccactcggcgtcggcgcgc---	Protospacer
********** *********   ****** ****

41. spacer 5.1|2853004|27|NZ_CP034550|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 6, identity: 0.778

cggctgacgatgcggcgagcgcgccca	CRISPR spacer
cggctgacgaggcggcgatcgcgaatg	Protospacer
********** ******* ****  ..

42. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgggcgctgccacgggtgctgccacggg	CRISPR spacer
tgcggcggctgccacgggggctgccacggc	Protospacer
.*.**  *********** **********

43. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to NZ_HG938357 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgggcgctgccacgggtgctgccacggg	CRISPR spacer
agtgggcgctgctacgggtgctggctatgg	Protospacer
 ***********.********** *   **

44. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to NC_048094 (Arthrobacter phage Eileen, complete genome) position: , mismatch: 6, identity: 0.8

cgtg-ggcgctgccacgggtgctgccacggg	CRISPR spacer
-gtgaggcgctgccccgggtgcggccaccac	Protospacer
 *** ********* ******* ***** .

45. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to NC_048095 (Arthrobacter phage Judy, complete genome) position: , mismatch: 6, identity: 0.8

cgtg-ggcgctgccacgggtgctgccacggg	CRISPR spacer
-gtgaggcgctgccccgggtgcggccaccat	Protospacer
 *** ********* ******* ***** .

46. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to MH834603 (Arthrobacter phage Bridgette, complete genome) position: , mismatch: 6, identity: 0.8

cgtg-ggcgctgccacgggtgctgccacggg	CRISPR spacer
-gtgaggcgctgccccgggtgcggccaccat	Protospacer
 *** ********* ******* ***** .

47. spacer 17.3|9020531|26|NZ_CP034550|CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.769

tcttgcgagaccgaactgggcaacgc	CRISPR spacer
aatgtcgagaccgaactgggcaacaa	Protospacer
  *  *******************.

48. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051472 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

49. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012965 (Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

50. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to CP047035 (Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

51. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047041 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

52. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015214 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

53. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030275 (Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

54. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015292 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
gtcgggcgcgagccggcccgcttcacggccgcc	Protospacer
*.   ****** *************** *****

55. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.818

gcgctgcgcgacccggcccgcttcacgcccgcc-	CRISPR spacer
ctgctcctcgacccggcccgcttcac-cgcgcca	Protospacer
 .*** * ****************** * ****

56. spacer 3.1|2070570|33|NZ_CP034550|CRISPRCasFinder matches to NZ_CP010894 (Pseudomonas sp. MRSN12121 plasmid, complete sequence) position: , mismatch: 7, identity: 0.788

gtccaacttctcttgctcgatgtccttgt-cgct	CRISPR spacer
ctttgacttctgttgctctatgtccttgtgcgc-	Protospacer
 *...****** ****** ********** ***

57. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cgtgggcgctgccacgggtgctgccacggg	CRISPR spacer
cgtgggcgctgccacggctgcgcgccggcg	Protospacer
***************** ***   *  * *

58. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 7, identity: 0.794

cacg-ttgtcgtcggcccactcgtcggggcgcaag	CRISPR spacer
-acgagtgtcgtcggccccgtcgtcggggccagag	Protospacer
 ***  ************  **********  .**

59. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 7, identity: 0.794

-cacgttgtcgtcggcccactcgtcggggcgcaag	CRISPR spacer
gtac-tggtcgtcgaccctctcgtcggggcggatg	Protospacer
 .** * *******.*** ************ * *

60. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019410 (Caulobacter phage CcrKarma, complete genome) position: , mismatch: 7, identity: 0.788

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
tccaagatgcggccgggcgggattgcccggccg	Protospacer
.**. * ************** *** *****.*

61. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019410 (Caulobacter phage CcrKarma, complete genome) position: , mismatch: 7, identity: 0.788

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
tccaagatgcggccgggcgggattgcccggccg	Protospacer
.**. * ************** *** *****.*

62. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 7, identity: 0.788

----cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
cggcccagc----cggccgtgcggccttggccggctg	Protospacer
    ** **    ****** **** ************

63. spacer 6.7|3226511|35|NZ_CP034550|CRISPRCasFinder matches to NC_022049 (Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence) position: , mismatch: 8, identity: 0.771

tggaccagcgtcagcgccgtctcgacctgcgccat	CRISPR spacer
gcggcgagcgtcagcgcggtctcggcctgcggctt	Protospacer
  *.* *********** ******.****** * *

64. spacer 9.1|4155157|30|NZ_CP034550|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

cgtgggcgctgccacgggtgctgccacggg	CRISPR spacer
acctcgcgctgccgcgggtgctgcgacggc	Protospacer
  .  ********.********** ****

65. spacer 11.1|4730641|31|NZ_CP034550|CRISPRCasFinder matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 8, identity: 0.742

ggggcgcacccgcccgtgccgggaccaaccc	CRISPR spacer
ggggcgcacccgccagtggcgggcgacgccg	Protospacer
************** *** ****    .**

66. spacer 11.1|4730641|31|NZ_CP034550|CRISPRCasFinder matches to NZ_CP046903 (Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence) position: , mismatch: 8, identity: 0.742

ggggcgcacccgcccgtgccgggaccaaccc	CRISPR spacer
ggggcgcacccgccagtggcgggcgacgccg	Protospacer
************** *** ****    .**

67. spacer 12.3|5920255|31|NZ_CP034550|CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 8, identity: 0.742

acccgcgccgcccccgcgggtgggaaccgca	CRISPR spacer
gcccgcgccgccgccgccggtgggcgcatcg	Protospacer
.*********** **** ****** .*  *.

68. spacer 18.2|9122730|33|NZ_CP034550|PILER-CR matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgcagtgccagaactcccgccacgcccggtc	CRISPR spacer
agcgcagccccagaactcccgccaccacacctc	Protospacer
.******. ****************  *   **

69. spacer 18.9|9123157|33|NZ_CP034550|PILER-CR matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.758

gttcacgtggcacgtcacgcacggcccgtccgt	CRISPR spacer
gcatggggggcacctcacgcacggcgcgtccgt	Protospacer
*. .. * ***** *********** *******

70. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MK460247 (Mycobacterium phage YoureAdopted, complete genome) position: , mismatch: 8, identity: 0.765

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgcta-	Protospacer
  *** *************** **** *..** *

71. spacer 18.14|9122725|33|NZ_CP034550|CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgcagtgccagaactcccgccacgcccggtc	CRISPR spacer
agcgcagccccagaactcccgccaccacacctc	Protospacer
.******. ****************  *   **

72. spacer 18.21|9123152|33|NZ_CP034550|CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.758

gttcacgtggcacgtcacgcacggcccgtccgt	CRISPR spacer
gcatggggggcacctcacgcacggcgcgtccgt	Protospacer
*. .. * ***** *********** *******

73. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF600313 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence) position: , mismatch: 8, identity: 0.758

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
ccgatgaagcggcggggcgggcttggccgtctc	Protospacer
** ..*  ***** *************** **

74. spacer 19.5|9131980|33|NZ_CP034550|CRISPRCasFinder,CRT matches to NZ_CP041042 (Paracoccus sp. AK26 plasmid pAK4, complete sequence) position: , mismatch: 8, identity: 0.758

cgtggtgacctggcccttggtgttgctggccgc	CRISPR spacer
aatggtgacctggcccttggtggtgatgcgcat	Protospacer
 .******************** ** **  *..

75. spacer 6.7|3226511|35|NZ_CP034550|CRISPRCasFinder matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 9, identity: 0.743

tggaccagcgtcagcgccgtctcgacctgcgccat	CRISPR spacer
cgatctcgcgtcagcgccgtctcgaccagcgcgcc	Protospacer
.*. *. ******************** ****  .

76. spacer 6.7|3226511|35|NZ_CP034550|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.743

tggaccagcgtcagcgccgtctcgacctgcgccat	CRISPR spacer
ccgttgagcgtcaccgccgtatcgacctgcgacgt	Protospacer
. * . ******* ****** ********** *.*

77. spacer 6.7|3226511|35|NZ_CP034550|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 9, identity: 0.743

tggaccagcgtcagcgccgtctcgacctgcgccat	CRISPR spacer
ccgttgagcgtcaccgccgtatcgacctgcgacgt	Protospacer
. * . ******* ****** ********** *.*

78. spacer 6.19|3226153|34|NZ_CP034550|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

gcttccaacttggcgtggacgctcgccgcggtac	CRISPR spacer
gtcctctacttcgcgtcgacgctcgccgcggggc	Protospacer
*....* **** **** ************** .*

79. spacer 11.1|4730641|31|NZ_CP034550|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

ggggcgcacccgcccgtgccgggaccaaccc	CRISPR spacer
agggcgcacacgcccgtgccgggcaggatgt	Protospacer
.******** *************   .*. .

80. spacer 11.1|4730641|31|NZ_CP034550|CRISPRCasFinder matches to LR606150 (Rhizobium sp. Q54 genome assembly, plasmid: 7) position: , mismatch: 9, identity: 0.71

ggggcgcacccgcccgtgccgggaccaaccc	CRISPR spacer
gcggcgcacccgcccttgccgcgacggcgag	Protospacer
* ************* ***** *** .

81. spacer 12.3|5920255|31|NZ_CP034550|CRT matches to NZ_CP032328 (Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence) position: , mismatch: 9, identity: 0.71

acccgcgccgcccccgcgggtgggaaccgca	CRISPR spacer
acccgcgccgatcccgcgggtggggcttaag	Protospacer
********** .************. ... .

82. spacer 12.3|5920255|31|NZ_CP034550|CRT matches to NZ_CP054608 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence) position: , mismatch: 9, identity: 0.71

acccgcgccgcccccgcgggtgggaaccgca	CRISPR spacer
acccgcgccgcccctgcggatggcgaggagg	Protospacer
**************.****.*** .*  . .

83. spacer 12.3|5920255|31|NZ_CP034550|CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 9, identity: 0.71

acccgcgccgcccccgcgggtgggaaccgca	CRISPR spacer
gccctcgccgccgccgcgggtggggtcgagg	Protospacer
.*** ******* ***********. * . .

84. spacer 18.3|9122791|33|NZ_CP034550|PILER-CR matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 9, identity: 0.727

gaccgcgcgcacacgctcgcggaacccggccat	CRISPR spacer
taccgcgcgcgcacgctcggggaactggcagct	Protospacer
 *********.******** *****. *    *

85. spacer 18.6|9122974|33|NZ_CP034550|PILER-CR matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 9, identity: 0.727

gaccgcgcgcacacgctcgcggaacccggccat	CRISPR spacer
taccgcgcgcgcacgctcggggaactggcagct	Protospacer
 *********.******** *****. *    *

86. spacer 18.11|9123279|33|NZ_CP034550|PILER-CR matches to NZ_CP013108 (Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence) position: , mismatch: 9, identity: 0.727

aaggtgaacttcgcggcccgtcagacctgggag	CRISPR spacer
cgggtgaacttcgcggttcgtcagacggcggga	Protospacer
 .**************..********   **..

87. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN234205 (Mycobacterium phage Veliki, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

88. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH727544 (Mycobacterium phage Dalmuri, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

89. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to JF704105 (Mycobacterium phage Adephagia, complete sequence) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

90. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN234198 (Mycobacterium phage Zavala, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

91. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MF140412 (Mycobacterium phage Jeckyll, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

92. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to KY380102 (Mycobacterium phage CREW, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

93. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to KX585253 (Mycobacterium phage HedwigODU, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

94. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN234230 (Mycobacterium phage Atiba, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

95. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MF140430 (Mycobacterium phage Tachez, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

96. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MF140428 (Mycobacterium phage Slimphazie, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

97. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to KJ567045 (Mycobacterium phage Emerson, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

98. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to JN185608 (Mycobacterium virus JAWS, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

99. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN234231 (Mycobacterium phage Rapunzel97, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

100. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to NC_014458 (Mycobacterium phage Angelica, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

101. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN908692 (Mycobacterium Phage BGlluviae, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

102. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to NC_023747 (Mycobacterium phage BarrelRoll, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

103. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MG962364 (Mycobacterium phage Deby, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

104. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH536821 (Mycobacterium phage Homura, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

105. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MF668267 (Mycobacterium phage Apocalypse, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

106. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH697578 (Mycobacterium phage Belladonna, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

107. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH077577 (Mycobacterium phage AlishaPH, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

108. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MF919532 (Mycobacterium phage Sulley, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

109. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH509444 (Mycobacterium phage BEEST, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

110. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN369742 (Mycobacterium phage Spock, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

111. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MK112537 (Mycobacterium Phage Capricorn, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

112. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN369746 (Mycobacterium phage Inky, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

113. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH051246 (Mycobacterium phage ActinUp, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

114. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH513977 (Mycobacterium phage Mynx, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

115. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MN234197 (Mycobacterium phage Ramen, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

116. spacer 18.13|9122663|34|NZ_CP034550|CRISPRCasFinder,CRT matches to MH371113 (Mycobacterium phage Beezoo, complete genome) position: , mismatch: 9, identity: 0.735

cacgttgtcgtcggcccactcgtcgg-ggcgcaag	CRISPR spacer
gtcgtagtcgtcggcccactcctcggcgatgctg-	Protospacer
  *** *************** **** *..** .

117. spacer 18.15|9122786|33|NZ_CP034550|CRISPRCasFinder,CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 9, identity: 0.727

gaccgcgcgcacacgctcgcggaacccggccat	CRISPR spacer
taccgcgcgcgcacgctcggggaactggcagct	Protospacer
 *********.******** *****. *    *

118. spacer 18.18|9122969|33|NZ_CP034550|CRISPRCasFinder,CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 9, identity: 0.727

gaccgcgcgcacacgctcgcggaacccggccat	CRISPR spacer
taccgcgcgcgcacgctcggggaactggcagct	Protospacer
 *********.******** *****. *    *

119. spacer 18.23|9123274|33|NZ_CP034550|CRISPRCasFinder,CRT matches to NZ_CP013108 (Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence) position: , mismatch: 9, identity: 0.727

aaggtgaacttcgcggcccgtcagacctgggag	CRISPR spacer
cgggtgaacttcgcggttcgtcagacggcggga	Protospacer
 .**************..********   **..

120. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019408 (Caulobacter phage CcrRogue, complete genome) position: , mismatch: 9, identity: 0.727

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
ttccgagtgcggccgggcgggattgcccggccg	Protospacer
..*  . ************** *** *****.*

121. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019408 (Caulobacter phage CcrRogue, complete genome) position: , mismatch: 9, identity: 0.727

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
ttccgagtgcggccgggcgggattgcccggccg	Protospacer
..*  . ************** *** *****.*

122. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 9, identity: 0.727

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
tttccagtgcggccgggcgggattgcccggccg	Protospacer
... *. ************** *** *****.*

123. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 9, identity: 0.727

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
tttccagtgcggccgggcgggattgcccggccg	Protospacer
... *. ************** *** *****.*

124. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019411 (Caulobacter phage CcrSwift, complete genome) position: , mismatch: 9, identity: 0.727

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
tttccagtgcggccgggcgggattgcccggccg	Protospacer
... *. ************** *** *****.*

125. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019411 (Caulobacter phage CcrSwift, complete genome) position: , mismatch: 9, identity: 0.727

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
tttccagtgcggccgggcgggattgcccggccg	Protospacer
... *. ************** *** *****.*

126. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.727

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
atcgagaccgacgcgggccgcttcacgcccgcc	Protospacer
..   *  **** *** ****************

127. spacer 6.1|3226080|36|NZ_CP034550|CRISPRCasFinder matches to JX006077 (Saccharomonospora phage PIS 136, complete genome) position: , mismatch: 10, identity: 0.722

ccggtcccacaccgcgtcgcggccggcggccagctc	CRISPR spacer
ccagtcccacaccgcgtcgcggacggttcgggattc	Protospacer
**.******************* ***.    ...**

128. spacer 6.24|3226585|37|NZ_CP034550|PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.73

ccaccgacccggccgggcactgggtgccc----ctggggcc	CRISPR spacer
tgaccgacccggccgggcgctgggtggccatcaccag----	Protospacer
. ****************.******* **    *..*

129. spacer 6.24|3226585|37|NZ_CP034550|PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.73

ccaccgacccggccgggcactgggtgccc----ctggggcc	CRISPR spacer
tgaccgacccggccgggcgctgggtggccatcaccag----	Protospacer
. ****************.******* **    *..*

130. spacer 11.1|4730641|31|NZ_CP034550|CRISPRCasFinder matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 10, identity: 0.677

ggggcgcacccgcccgtgccgggaccaaccc	CRISPR spacer
atcgcgcagccgcccgtgcagggaccgcgtg	Protospacer
.  ***** ********** ******.  .

131. spacer 19.1|9131736|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 10, identity: 0.697

cccgcgttgcggccgggcgggcttggccggctg	CRISPR spacer
gggcttctgcggcagggcgggcttgaccggctt	Protospacer
    . .****** ***********.******

132. spacer 19.3|9131858|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 10, identity: 0.697

ccagacggccgcgcgtccgcgctccgtgtcctc	CRISPR spacer
tggcacggcctcgcgcccgcgctccgtgtgtcg	Protospacer
. . ****** ****.************* ..

133. spacer 19.3|9131858|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047317 (Burkholderia glumae AU6208 plasmid pwszb, complete sequence) position: , mismatch: 10, identity: 0.697

ccagacggccgcgcgtccgcgctccgtgtcctc	CRISPR spacer
tggcacggccccgcgcccgcgctccgtgtgtcg	Protospacer
. . ****** ****.************* ..

134. spacer 19.3|9131858|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007214 (Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence) position: , mismatch: 10, identity: 0.697

ccagacggccgcgcgtccgcgctccgtgtcctc	CRISPR spacer
tggcacggccccgcgcccgcgctccgtgtgtcg	Protospacer
. . ****** ****.************* ..

135. spacer 19.3|9131858|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009433 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence) position: , mismatch: 10, identity: 0.697

ccagacggccgcgcgtccgcgctccgtgtcctc	CRISPR spacer
tggcacggccccgcgcccgcgctccgtgtgtcg	Protospacer
. . ****** ****.************* ..

136. spacer 19.3|9131858|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_012720 (Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence) position: , mismatch: 10, identity: 0.697

ccagacggccgcgcgtccgcgctccgtgtcctc	CRISPR spacer
tggcacggccccgcgcccgcgctccgtgtgtcg	Protospacer
. . ****** ****.************* ..

137. spacer 19.3|9131858|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ccagacggccgcgcgtccgcgctccgtgtcctc	CRISPR spacer
tggcacggcctcgcgcccgcgctccgtgtgtcg	Protospacer
. . ****** ****.************* ..

138. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP289281 (Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
ccgctgcgcgatccggccggcttcaactttccg	Protospacer
 **********.****** ******  ... *

139. spacer 19.4|9131919|33|NZ_CP034550|PILER-CR,CRISPRCasFinder,CRT matches to NC_004956 (Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence) position: , mismatch: 10, identity: 0.697

gcgctgcgcgacccggcccgcttcacgcccgcc	CRISPR spacer
ccgctgcgcgatccggccggcttcaactttccg	Protospacer
 **********.****** ******  ... *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3172711 : 3234152

Gordonia_phage(40.0%)

transposase,integrase

attL 3192558:3192575|attR 3245693:3245710

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153278087.1\|3172711_3173335_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153278905.1\|3174965_3176045_-\|integrase	tyrosine-type recombinase/integrase	A0A1U9WS15	Gordonia_phage	4.9e-11	32.6
WP_153278088.1\|3176127_3176406_-	hypothetical protein	NA	NA	NA	NA
WP_153278089.1\|3176461_3176692_+	hypothetical protein	NA	NA	NA	NA
WP_153278090.1\|3176999_3177683_+\|transposase	transposase	NA	NA	NA	NA
WP_033435356.1\|3178999_3179854_-	hypothetical protein	NA	NA	NA	NA
WP_153278091.1\|3180037_3181369_+	hypothetical protein	NA	NA	NA	NA
WP_033435354.1\|3181500_3181767_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_153278092.1\|3181779_3182028_+	hypothetical protein	NA	NA	NA	NA
WP_153278093.1\|3182080_3184354_+	hypothetical protein	NA	NA	NA	NA
WP_033435352.1\|3184350_3185628_+	hypothetical protein	NA	NA	NA	NA
WP_051766949.1\|3185816_3186569_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_084717137.1\|3186600_3187872_+	sensor histidine kinase	NA	NA	NA	NA
WP_033435351.1\|3187868_3188546_+	response regulator transcription factor	NA	NA	NA	NA
WP_153278094.1\|3188637_3188802_-	hypothetical protein	NA	NA	NA	NA
WP_153278095.1\|3188735_3188924_-	DUF3040 domain-containing protein	NA	NA	NA	NA
WP_153278096.1\|3190070_3190988_+	hypothetical protein	NA	NA	NA	NA
3192558:3192575	attL	NA	NA	NA	NA
WP_153278097.1\|3193440_3193800_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_033435349.1\|3193891_3194995_+\|integrase	site-specific integrase	A0A159B6J3	Gordonia_phage	3.5e-20	29.4
WP_033435348.1\|3195234_3195681_-	TIGR02611 family protein	NA	NA	NA	NA
WP_084717134.1\|3195688_3196519_-	hypothetical protein	NA	NA	NA	NA
WP_051766945.1\|3196461_3197133_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_033435346.1\|3197354_3197780_+	SsgA family sporulation/cell division regulator	NA	NA	NA	NA
WP_033435343.1\|3202213_3203425_-	hypothetical protein	NA	NA	NA	NA
WP_084717133.1\|3203421_3204366_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_033435342.1\|3204598_3204862_+	hypothetical protein	NA	NA	NA	NA
WP_153278098.1\|3205304_3206957_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_153278099.1\|3207217_3210577_+	hypothetical protein	NA	NA	NA	NA
WP_153278100.1\|3210609_3217455_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_033435340.1\|3217451_3217808_+	hypothetical protein	NA	NA	NA	NA
WP_153278906.1\|3217939_3218395_-	hypothetical protein	NA	NA	NA	NA
WP_051766938.1\|3219362_3222680_+	CHAT domain-containing protein	NA	NA	NA	NA
WP_051766937.1\|3222923_3223403_-	hypothetical protein	NA	NA	NA	NA
WP_153278101.1\|3223645_3223786_+	hypothetical protein	NA	NA	NA	NA
WP_033435339.1\|3223795_3224203_+	hypothetical protein	NA	NA	NA	NA
WP_153278102.1\|3224202_3224688_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_033435337.1\|3225136_3225952_-	hypothetical protein	NA	NA	NA	NA
WP_063741534.1\|3227408_3228224_-	NYN domain-containing protein	NA	NA	NA	NA
WP_033435361.1\|3228562_3230272_+	AAA family ATPase	E5E3R2	Burkholderia_phage	2.2e-05	21.5
WP_033435360.1\|3230271_3232032_+	ATP-dependent helicase	S5MMD7	Bacillus_phage	7.2e-28	25.7
WP_153278103.1\|3232169_3232964_+	hypothetical protein	NA	NA	NA	NA
WP_084717135.1\|3233855_3234152_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	3.8e-06	43.9
3245693:3245710	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3418320 : 3447501

Bacillus_phage(33.33%)

tail,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033433189.1\|3418320_3419883_+\|tail	phage tail sheath family protein	A0A127AW39	Bacillus_phage	6.9e-22	31.0
WP_033433188.1\|3419921_3420368_+\|tail	phage tail protein	NA	NA	NA	NA
WP_033433187.1\|3420377_3422024_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
WP_033433186.1\|3422025_3422457_+\|tail	phage tail protein	NA	NA	NA	NA
WP_033433185.1\|3422462_3422666_+	hypothetical protein	NA	NA	NA	NA
WP_033433184.1\|3422670_3423327_+	hypothetical protein	NA	NA	NA	NA
WP_033433183.1\|3423323_3424397_+	phage late control D family protein	NA	NA	NA	NA
WP_051766416.1\|3424406_3425060_+	hypothetical protein	H6WFY4	Cyanophage	7.1e-05	34.2
WP_033433182.1\|3425076_3425460_+	PAAR motif protein	NA	NA	NA	NA
WP_033433181.1\|3425463_3425880_+	GPW/gp25 family protein	A0A1D8KJJ7	Synechococcus_phage	2.0e-05	33.8
WP_033433180.1\|3425876_3427847_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_033433179.1\|3427843_3429118_+	hypothetical protein	NA	NA	NA	NA
WP_033433178.1\|3429128_3430055_+	hypothetical protein	NA	NA	NA	NA
WP_033433177.1\|3430051_3430807_+	hypothetical protein	NA	NA	NA	NA
WP_033433176.1\|3430803_3431754_+	hypothetical protein	NA	NA	NA	NA
WP_153278133.1\|3431761_3433087_+	hypothetical protein	NA	NA	NA	NA
WP_033433174.1\|3433083_3434931_+	hypothetical protein	NA	NA	NA	NA
WP_153278134.1\|3434977_3435334_+	hypothetical protein	NA	NA	NA	NA
WP_153278135.1\|3435357_3436188_+	hypothetical protein	NA	NA	NA	NA
WP_084716798.1\|3436269_3438396_+	ATP-binding protein	NA	NA	NA	NA
WP_033433170.1\|3438398_3442112_+	hypothetical protein	NA	NA	NA	NA
WP_153278136.1\|3442168_3443587_-	actin cross-linking domain-containing toxin	NA	NA	NA	NA
WP_153278137.1\|3443642_3444734_-	chlorophyllase	NA	NA	NA	NA
WP_033433168.1\|3445922_3446729_-	hypothetical protein	NA	NA	NA	NA
WP_153278138.1\|3446844_3447501_-\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

6169362 : 6248985

Pseudomonas_phage(33.33%)

transposase,integrase

attL 6159980:6160001|attR 6247001:6247022

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6159980:6160001	attL	NA	NA	NA	NA
WP_033434951.1\|6169362_6170793_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_033434919.1\|6171197_6171866_+	HNH endonuclease	NA	NA	NA	NA
WP_033434920.1\|6172046_6172496_-	hypothetical protein	NA	NA	NA	NA
WP_084717066.1\|6173337_6173751_-\|transposase	transposase	NA	NA	NA	NA
WP_153278412.1\|6174363_6176274_+	hypothetical protein	NA	NA	NA	NA
WP_153278413.1\|6176636_6177233_+	hypothetical protein	NA	NA	NA	NA
WP_153278414.1\|6177256_6177925_-	hypothetical protein	NA	NA	NA	NA
WP_033434924.1\|6178203_6178476_-	hypothetical protein	NA	NA	NA	NA
WP_084717075.1\|6178658_6178838_-	hypothetical protein	NA	NA	NA	NA
WP_153278415.1\|6180070_6180208_-	hypothetical protein	NA	NA	NA	NA
WP_084717068.1\|6180206_6181760_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_153278416.1\|6183027_6185331_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_033434925.1\|6185568_6185868_+	hypothetical protein	NA	NA	NA	NA
WP_084717070.1\|6186330_6187680_-	hypothetical protein	A0A2H4P750	Pseudomonas_phage	1.8e-26	34.2
WP_153278417.1\|6188069_6188504_-	hypothetical protein	NA	NA	NA	NA
WP_033434927.1\|6188496_6188748_-	hypothetical protein	NA	NA	NA	NA
WP_033434928.1\|6188757_6191802_-	hypothetical protein	NA	NA	NA	NA
WP_084717076.1\|6193052_6194405_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_033434929.1\|6195637_6196831_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_033434930.1\|6199223_6199613_+	hypothetical protein	NA	NA	NA	NA
WP_153278418.1\|6200142_6203253_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_033434931.1\|6203678_6204206_-	hypothetical protein	NA	NA	NA	NA
WP_033434932.1\|6204340_6205042_-	hypothetical protein	NA	NA	NA	NA
WP_033434933.1\|6205522_6206503_+	hypothetical protein	NA	NA	NA	NA
WP_153278419.1\|6206532_6207477_+	hypothetical protein	NA	NA	NA	NA
WP_051766854.1\|6207568_6208246_+	hypothetical protein	NA	NA	NA	NA
WP_153278420.1\|6208691_6209216_-	hypothetical protein	NA	NA	NA	NA
WP_153278421.1\|6210012_6210903_-	hypothetical protein	NA	NA	NA	NA
WP_153278422.1\|6211511_6212042_-	hypothetical protein	NA	NA	NA	NA
WP_153278423.1\|6212725_6213976_+	hypothetical protein	NA	NA	NA	NA
WP_033434939.1\|6214113_6214812_-	hypothetical protein	NA	NA	NA	NA
WP_153278424.1\|6215352_6216618_-	hypothetical protein	NA	NA	NA	NA
WP_033434941.1\|6217138_6218332_+	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	NA	NA	NA	NA
WP_084717072.1\|6218328_6218826_-	hypothetical protein	NA	NA	NA	NA
WP_033434960.1\|6218822_6219947_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_084717073.1\|6220009_6221068_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_153278425.1\|6221064_6222084_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	6.8e-55	37.8
WP_051766857.1\|6222134_6222713_-	dTDP-4-keto-6-deoxy-D-glucose epimerase	I7HJC4	Enterobacteria_phage	3.3e-06	33.3
WP_051766855.1\|6223077_6224337_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_153278426.1\|6224580_6224973_+	hypothetical protein	NA	NA	NA	NA
WP_033435936.1\|6227297_6228137_-	hypothetical protein	NA	NA	NA	NA
WP_084717218.1\|6229901_6230693_+	radical SAM protein	NA	NA	NA	NA
WP_033435938.1\|6230720_6231593_+	hypothetical protein	NA	NA	NA	NA
WP_084717216.1\|6231848_6232298_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_033435939.1\|6233009_6235193_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_153278427.1\|6237348_6237837_+	hypothetical protein	NA	NA	NA	NA
WP_033435941.1\|6237871_6238435_-	hypothetical protein	NA	NA	NA	NA
WP_153278428.1\|6238529_6238823_+	hypothetical protein	NA	NA	NA	NA
WP_033435943.1\|6239572_6240091_+	hypothetical protein	NA	NA	NA	NA
WP_153278429.1\|6240106_6242230_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_051767101.1\|6242352_6243210_-	hypothetical protein	NA	NA	NA	NA
WP_084717227.1\|6244080_6246798_-	hypothetical protein	NA	NA	NA	NA
WP_153278430.1\|6247036_6247633_-\|transposase	IS630 family transposase	NA	NA	NA	NA
6247001:6247022	attR	NA	NA	NA	NA
WP_033436072.1\|6247557_6248097_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153278431.1\|6248158_6248985_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

6255951 : 6309906

Vibrio_phage(50.0%)

transposase,integrase

attL 6259754:6259771|attR 6315083:6315100

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051766960.1\|6255951_6256320_+\|transposase	transposase	NA	NA	NA	NA
WP_033435424.1\|6256654_6257338_-	HNH endonuclease	NA	NA	NA	NA
WP_153278433.1\|6257818_6259501_+	hypothetical protein	NA	NA	NA	NA
WP_033435422.1\|6259497_6260616_+	hypothetical protein	NA	NA	NA	NA
6259754:6259771	attL	NA	NA	NA	NA
WP_153278434.1\|6260738_6262463_+	endonuclease/exonuclease/phosphatase	NA	NA	NA	NA
WP_033435421.1\|6262528_6263476_+	hypothetical protein	NA	NA	NA	NA
WP_153278435.1\|6263613_6263883_-	hypothetical protein	NA	NA	NA	NA
WP_153278436.1\|6265195_6266191_+	hypothetical protein	NA	NA	NA	NA
WP_033435418.1\|6266340_6267120_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_051766957.1\|6267187_6268558_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_084717139.1\|6268738_6269308_+	DUF4254 domain-containing protein	NA	NA	NA	NA
WP_033435416.1\|6269313_6269622_+	hypothetical protein	NA	NA	NA	NA
WP_051766956.1\|6269614_6269965_+	hypothetical protein	NA	NA	NA	NA
WP_033435415.1\|6270326_6271592_+	methyltransferase, FxLD system	A0A1J0MC37	Streptomyces_phage	1.0e-15	37.5
WP_033435432.1\|6271607_6271808_+	FxLD family lantipeptide	NA	NA	NA	NA
WP_153278957.1\|6272014_6274945_+	lantibiotic dehydratase	NA	NA	NA	NA
WP_033435413.1\|6274941_6276165_+	lanthionine synthetase C family protein	NA	NA	NA	NA
WP_063741544.1\|6276146_6278321_+	hypothetical protein	NA	NA	NA	NA
WP_033435412.1\|6278692_6279199_+	hypothetical protein	NA	NA	NA	NA
WP_051766955.1\|6279824_6280199_+	hypothetical protein	NA	NA	NA	NA
WP_153278437.1\|6280332_6281211_+	hypothetical protein	NA	NA	NA	NA
WP_033435411.1\|6281404_6282256_+	hypothetical protein	NA	NA	NA	NA
WP_153278438.1\|6282252_6282723_+	hypothetical protein	NA	NA	NA	NA
WP_033435410.1\|6282638_6283457_-	hypothetical protein	NA	NA	NA	NA
WP_153278439.1\|6283458_6283755_-	hypothetical protein	NA	NA	NA	NA
WP_153278440.1\|6284594_6285236_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153278441.1\|6286866_6287979_-\|integrase	tyrosine-type recombinase/integrase	A0A1U9WS15	Gordonia_phage	5.1e-11	32.6
WP_051767105.1\|6288089_6289160_+	hypothetical protein	NA	NA	NA	NA
WP_033436046.1\|6289189_6289474_+	hypothetical protein	A0A2I7RIS9	Vibrio_phage	4.7e-06	30.0
WP_033436045.1\|6289954_6291790_+	hypothetical protein	NA	NA	NA	NA
WP_033436044.1\|6291955_6292201_+	hypothetical protein	NA	NA	NA	NA
WP_033436051.1\|6292708_6292984_+	hypothetical protein	NA	NA	NA	NA
WP_084717234.1\|6293114_6294263_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_033436050.1\|6294684_6295656_-	hypothetical protein	NA	NA	NA	NA
WP_153278442.1\|6295830_6296592_-\|transposase	transposase	NA	NA	NA	NA
WP_033435689.1\|6297721_6298267_+	hypothetical protein	NA	NA	NA	NA
WP_153278443.1\|6298719_6299106_+	hypothetical protein	NA	NA	NA	NA
WP_033435687.1\|6299205_6299553_+	hypothetical protein	NA	NA	NA	NA
WP_051767031.1\|6299618_6300275_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_051767030.1\|6300512_6301994_+	ATP-binding protein	NA	NA	NA	NA
WP_033435686.1\|6301993_6302551_+	hypothetical protein	NA	NA	NA	NA
WP_033435685.1\|6302812_6303271_+	hypothetical protein	NA	NA	NA	NA
WP_153278444.1\|6303395_6303968_+	hypothetical protein	NA	NA	NA	NA
WP_051767029.1\|6303964_6304603_+	hypothetical protein	NA	NA	NA	NA
WP_084717171.1\|6304796_6305222_+	DUF4326 domain-containing protein	A0A2I7QWU1	Vibrio_phage	1.2e-16	47.7
WP_153278445.1\|6306355_6308410_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_153278446.1\|6308670_6309906_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
6315083:6315100	attR	NA	NA	NA	NA

DBSCAN-SWA_5

6368818 : 6392598

Escherichia_phage(33.33%)

transposase,integrase

attL 6365726:6365742|attR 6401065:6401081

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6365726:6365742	attL	NA	NA	NA	NA
WP_153278960.1\|6368818_6369823_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_033435558.1\|6369833_6370250_-	hypothetical protein	NA	NA	NA	NA
WP_033435559.1\|6371151_6371463_+\|transposase	transposase	A0A0N7C1Z2	Escherichia_phage	8.0e-07	39.8
WP_153278465.1\|6371518_6372349_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.8e-35	39.4
WP_153278466.1\|6372489_6373599_+	hypothetical protein	NA	NA	NA	NA
WP_153278467.1\|6373740_6374331_-\|transposase	transposase	NA	NA	NA	NA
WP_033435561.1\|6374540_6375272_-	TIGR02391 family protein	C7BGE5	Burkholderia_phage	1.1e-22	36.1
WP_153278468.1\|6375947_6376749_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153278469.1\|6376866_6378141_+	CHAT domain-containing protein	NA	NA	NA	NA
WP_033435564.1\|6378149_6378470_+	hypothetical protein	NA	NA	NA	NA
WP_084717158.1\|6378514_6379093_+	hypothetical protein	NA	NA	NA	NA
WP_033435567.1\|6380674_6381256_+	hypothetical protein	NA	NA	NA	NA
WP_153278470.1\|6381453_6383226_-	hypothetical protein	NA	NA	NA	NA
WP_084717159.1\|6383880_6384129_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_051766999.1\|6384250_6385639_-	hypothetical protein	NA	NA	NA	NA
WP_033435574.1\|6386003_6387707_-	ATP-dependent helicase	NA	NA	NA	NA
WP_051766997.1\|6387706_6389593_-	AAA family ATPase	NA	NA	NA	NA
WP_153278471.1\|6389926_6390838_+	hypothetical protein	NA	NA	NA	NA
WP_084717160.1\|6390815_6391367_+	hypothetical protein	NA	NA	NA	NA
WP_033436072.1\|6391537_6392077_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153278430.1\|6392001_6392598_+\|transposase	IS630 family transposase	NA	NA	NA	NA
6401065:6401081	attR	NA	NA	NA	NA

DBSCAN-SWA_6

7527231 : 7586907

Mycobacterium_phage(18.18%)

plate,tRNA,tail,transposase,integrase

attL 7528374:7528392|attR 7558929:7558947

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033429242.1\|7527231_7527711_-\|tRNA	arginine--tRNA ligase	A0A1S5V1P6	Saudi_moumouvirus	1.8e-13	32.6
WP_033429341.1\|7528101_7529829_+\|tRNA	arginine--tRNA ligase	A0A1V0SIS8	Klosneuvirus	9.1e-84	36.7
7528374:7528392	attL	NA	NA	NA	NA
WP_051764982.1\|7530712_7531975_-	MFS transporter	NA	NA	NA	NA
WP_153278580.1\|7531971_7533135_-	hypothetical protein	NA	NA	NA	NA
WP_033429240.1\|7533897_7535337_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_033429238.1\|7535649_7536108_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_033429237.1\|7536152_7536929_-	inositol monophosphatase family protein	NA	NA	NA	NA
WP_033429236.1\|7536983_7538147_-	phosphoserine transaminase	NA	NA	NA	NA
WP_084716156.1\|7538244_7539285_-	peptide synthase	NA	NA	NA	NA
WP_033429235.1\|7539343_7540261_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_051764980.1\|7540299_7541724_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_033429337.1\|7541824_7543201_-	aminotransferase	NA	NA	NA	NA
WP_033429234.1\|7543294_7544275_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_051764978.1\|7544306_7546130_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_153278581.1\|7546183_7547455_-	kinase-like protein	NA	NA	NA	NA
WP_063741267.1\|7547423_7555085_-	type I polyketide synthase	D0R7J2	Paenibacillus_phage	8.8e-46	32.0
WP_033429232.1\|7555489_7555978_-	hypothetical protein	NA	NA	NA	NA
WP_033429231.1\|7556132_7557398_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.1e-51	34.4
WP_153278979.1\|7557900_7558563_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	6.5e-14	38.1
WP_033429230.1\|7558604_7559207_-\|tRNA	arginine--tRNA ligase	A0A0G2Y627	Acanthamoeba_polyphaga_mimivirus	2.2e-16	41.7
7558929:7558947	attR	NA	NA	NA	NA
WP_033429229.1\|7559286_7560984_-	alpha-glucosidase	NA	NA	NA	NA
WP_033429333.1\|7561352_7562309_-	polyphosphate kinase 2	NA	NA	NA	NA
WP_033429228.1\|7562578_7563577_+	protein kinase family protein	NA	NA	NA	NA
WP_033429227.1\|7563579_7564560_+	hypothetical protein	T2FJV2	Mycobacterium_phage	1.7e-63	42.2
WP_084716169.1\|7564571_7565774_+	adenylosuccinate synthetase	G1FIX2	Mycobacterium_phage	4.6e-58	44.2
WP_033429226.1\|7565770_7566406_+	NUDIX hydrolase	NA	NA	NA	NA
WP_033429225.1\|7566466_7566871_+	hypothetical protein	NA	NA	NA	NA
WP_037330888.1\|7567672_7571257_+	AAA family ATPase	NA	NA	NA	NA
WP_153278582.1\|7571553_7571706_-	hypothetical protein	NA	NA	NA	NA
WP_153278583.1\|7571796_7571967_-	hypothetical protein	NA	NA	NA	NA
WP_033435992.1\|7571968_7572589_-	response regulator transcription factor	NA	NA	NA	NA
WP_084717222.1\|7572811_7573912_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_033435983.1\|7575479_7576034_-\|tail	phage tail protein	NA	NA	NA	NA
WP_033435984.1\|7576030_7577965_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_033435985.1\|7577964_7578375_-	GPW/gp25 family protein	A0A0E3F3H3	Synechococcus_phage	1.9e-08	36.4
WP_033435986.1\|7578371_7578686_-	hypothetical protein	NA	NA	NA	NA
WP_033435987.1\|7578700_7580398_-	VgrG-related protein	NA	NA	NA	NA
WP_051767090.1\|7580394_7581066_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_033435988.1\|7581178_7581613_-\|tail	phage tail protein	T2KSM5	uncultured_phage	3.6e-05	28.6
WP_153278584.1\|7581639_7581936_-	hypothetical protein	NA	NA	NA	NA
WP_033435974.1\|7584444_7584906_-	hypothetical protein	NA	NA	NA	NA
WP_033435975.1\|7584902_7585343_-\|tail	phage tail protein	NA	NA	NA	NA
WP_033435976.1\|7585383_7586907_-\|tail	phage tail sheath family protein	H6WFT7	Cyanophage	1.1e-24	28.9

DBSCAN-SWA_7

9133235 : 9138638

Gordonia_phage(80.0%)

transposase,integrase

attL 9120524:9120541|attR 9144213:9144230

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
9120524:9120541	attL	NA	NA	NA	NA
WP_153279007.1\|9133235_9133712_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q8W6R2	Burkholderia_virus	1.2e-17	54.5
WP_153278704.1\|9133573_9134059_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	7.8e-17	43.3
WP_033430605.1\|9134146_9134380_-\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	2.6e-10	52.7
WP_084716330.1\|9134595_9136971_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_033430606.1\|9137125_9137326_-\|integrase	integrase	NA	NA	NA	NA
WP_153279008.1\|9137431_9137602_-	hypothetical protein	NA	NA	NA	NA
WP_153278705.1\|9137562_9138324_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	1.9e-54	49.8
WP_153278706.1\|9138179_9138638_-\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	9.3e-28	64.2
9144213:9144230	attR	NA	NA	NA	NA

DBSCAN-SWA_8

9449826 : 9498056

Bacillus_phage(40.0%)

protease,integrase

attL 9449073:9449089|attR 9503419:9503435

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
9449073:9449089	attL	NA	NA	NA	NA
WP_033436069.1\|9449826_9451023_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_153278724.1\|9451025_9452252_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_033431425.1\|9452426_9452693_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_033431426.1\|9452831_9453482_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.4e-05	30.3
WP_033431427.1\|9453485_9455129_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_033431428.1\|9455169_9455994_-	ABC transporter permease	NA	NA	NA	NA
WP_033431429.1\|9455990_9456833_-	ABC transporter permease	NA	NA	NA	NA
WP_033431430.1\|9456832_9457981_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_033431586.1\|9457973_9459089_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-24	33.0
WP_084716459.1\|9459288_9459591_+	DUF2631 domain-containing protein	NA	NA	NA	NA
WP_033431432.1\|9459747_9460239_+	carbonic anhydrase	NA	NA	NA	NA
WP_033431433.1\|9460631_9461738_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_033431434.1\|9461844_9462480_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033431435.1\|9462535_9463519_-	aldo/keto reductase	NA	NA	NA	NA
WP_051765919.1\|9463583_9464330_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_033431588.1\|9464385_9465201_+	glyoxalase/bleomycin resistance protein/dioxygenase	NA	NA	NA	NA
WP_033431436.1\|9465214_9466180_+	hypothetical protein	NA	NA	NA	NA
WP_033431437.1\|9466250_9467018_+	VOC family protein	NA	NA	NA	NA
WP_033431438.1\|9467021_9467873_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_033431439.1\|9467956_9468514_-	ribosome recycling factor	NA	NA	NA	NA
WP_033431440.1\|9468562_9469333_-	UMP kinase	NA	NA	NA	NA
WP_033431441.1\|9469400_9470216_-	elongation factor Ts	NA	NA	NA	NA
WP_033431442.1\|9470310_9471141_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_033431590.1\|9472541_9473312_-	FliA/WhiG family RNA polymerase sigma factor	A0A1I9S6C3	Bacillus_phage	4.9e-05	26.8
WP_033431443.1\|9473634_9474612_-	tyrosine recombinase XerC	A0A1D8EVX7	Mycobacterium_phage	4.8e-13	30.5
WP_033431592.1\|9475257_9476391_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_084716485.1\|9477734_9478871_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_084716465.1\|9478867_9479395_+	hypothetical protein	NA	NA	NA	NA
WP_153278725.1\|9479960_9480479_-	hypothetical protein	NA	NA	NA	NA
WP_084716466.1\|9480640_9481762_-	ImmA/IrrE family metallo-endopeptidase	A0A0U4JD08	Gordonia_phage	4.3e-18	28.4
WP_033431445.1\|9481739_9482369_-	hypothetical protein	NA	NA	NA	NA
WP_084716468.1\|9482460_9483096_-	class IV adenylate cyclase	NA	NA	NA	NA
WP_084716470.1\|9483011_9483896_-	aldo/keto reductase	NA	NA	NA	NA
WP_051765931.1\|9483873_9484638_+	hypothetical protein	NA	NA	NA	NA
WP_033431446.1\|9484985_9485210_-	hypothetical protein	NA	NA	NA	NA
WP_084716487.1\|9485499_9486384_-	AbiV family abortive infection protein	NA	NA	NA	NA
WP_051765933.1\|9486608_9487196_+	hypothetical protein	NA	NA	NA	NA
WP_153278726.1\|9487192_9488083_+	hypothetical protein	NA	NA	NA	NA
WP_153278727.1\|9488421_9489648_+	hypothetical protein	NA	NA	NA	NA
WP_084716471.1\|9489783_9490023_+	hypothetical protein	NA	NA	NA	NA
WP_153278728.1\|9490323_9490611_+	hypothetical protein	NA	NA	NA	NA
WP_084716489.1\|9490595_9491771_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_033431450.1\|9492148_9492397_+	hypothetical protein	NA	NA	NA	NA
WP_153278729.1\|9492483_9492804_+	hypothetical protein	NA	NA	NA	NA
WP_153278730.1\|9494517_9495702_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_051765941.1\|9495698_9498056_+\|integrase	site-specific integrase	NA	NA	NA	NA
9503419:9503435	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP034550

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection