CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045641	Klebsiella quasipneumoniae strain KP18-31 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045641_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045641_1

100522-100636

Unclear

Consensus_repeat	Method
TTCTGCGCTGTGCGTAACCCGGGTAAGGCGCCAG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP045641_1

>merge|NZ_CP045641|1|100522-100636|CRISPRCasFinder
TTCTGCGCTGTGCGTAACCCGGGTAAGGCGCCAGACGCCACCCGGGAATCCCTGCTTGCACTAGGCTTAGCAGGGCTACACTTCTGCGCTGTGCGTAGCCCGGGTAAGGCGCCAG

>NZ_CP045641|1|1|100522-100636|CRISPRCasFinder
TTCTGCGCTGTGCGTAACCCGGGTAAGGCGCCAG	ACGCCACCCGGGAATCCCTGCTTGCACTAGGCTTAGCAGGGCTACAC
TTCTGCGCTGTGCGTAGCCCGGGTAAGGCGCCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045641.1\|WP_043522751.1\|103831_104431_-\|YiiQ-family-protein	unknown	unknown	gnl\|CDD\|369310
NZ_CP045641.1\|WP_002922909.1\|102954_103722_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_CP045641.1\|WP_023319347.1\|88203_89583_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP045641.1\|WP_128335894.1\|89595_91155_-\|PTS-glucose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|273925
NZ_CP045641.1\|WP_004205080.1\|109866_111987_-\|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236843
NZ_CP045641.1\|WP_004901437.1\|94948_96151_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_CP045641.1\|WP_004173894.1\|104543_104972_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
NZ_CP045641.1\|WP_004205097.1\|87006_87729_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP045641.1\|WP_032456734.1\|104972_105719_-\|ferredoxin--NADP(+)-reductase	unknown	unknown	gnl\|CDD\|182844
NZ_CP045641.1\|WP_004205091.1\|97798_98650_-\|aquaporin	unknown	unknown	gnl\|CDD\|238204
NZ_CP045641.1\|WP_004150222.1\|99092_99338_+\|septal-ring-assembly-protein-ZapB	unknown	unknown	gnl\|CDD\|185320
NZ_CP045641.1\|WP_023319341.1\|109015_109705_-\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	unknown	unknown	gnl\|CDD\|236837
NZ_CP045641.1\|WP_023319346.1\|91406_93122_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|282957
NZ_CP045641.1\|WP_004205085.1\|105869_106880_-\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|224411
NZ_CP045641.1\|WP_135715985.1\|101557_102862_+\|citrate-transporter	unknown	unknown	gnl\|CDD\|273267
NZ_CP045641.1\|WP_065697435.1\|93272_94664_-\|uracil-xanthine-permease	unknown	unknown	gnl\|CDD\|273276
NZ_CP045641.1\|WP_004873089.1\|96265_97777_-\|glycerol-kinase-GlpK	unknown	unknown	gnl\|CDD\|234594
NZ_CP045641.1\|WP_053809859.1\|100728_101493_+\|CDP-diacylglycerol-diphosphatase	unknown	unknown	gnl\|CDD\|235485
NZ_CP045641.1\|WP_004205090.1\|99490_100480_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182700
NZ_CP045641.1\|WP_023319342.1\|106928_109010_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794

Protein	Function_ID	Function_description	E-value
NZ_CP045641.1\|WP_043522751.1\|103831_104431_-\|YiiQ-family-protein	gnl\|CDD\|369310	pfam07305, DUF1454, Protein of unknown function (DUF1454). This family consists of several Enterobacterial sequences of around 200 residues in length which are often known as YiiQ proteins. The function of this family is unknown.	3.26323e-98
NZ_CP045641.1\|WP_002922909.1\|102954_103722_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	3.18645e-141
NZ_CP045641.1\|WP_023319347.1\|88203_89583_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	9.61556e-143
NZ_CP045641.1\|WP_128335894.1\|89595_91155_-\|PTS-glucose-transporter-subunit-IIBC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.9052e-109
NZ_CP045641.1\|WP_004205080.1\|109866_111987_-\|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase	gnl\|CDD\|236843	PRK11092, PRK11092, bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase.	0
NZ_CP045641.1\|WP_004901437.1\|94948_96151_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP045641.1\|WP_004173894.1\|104543_104972_+\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	2.20766e-24
NZ_CP045641.1\|WP_004205097.1\|87006_87729_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	9.69564e-21
NZ_CP045641.1\|WP_032456734.1\|104972_105719_-\|ferredoxin--NADP(+)-reductase	gnl\|CDD\|182844	PRK10926, PRK10926, ferredoxin-NADP reductase; Provisional.	0
NZ_CP045641.1\|WP_004205091.1\|97798_98650_-\|aquaporin	gnl\|CDD\|238204	cd00333, MIP, Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.	5.4888e-82
NZ_CP045641.1\|WP_004150222.1\|99092_99338_+\|septal-ring-assembly-protein-ZapB	gnl\|CDD\|185320	PRK15422, PRK15422, septal ring assembly protein ZapB; Provisional.	1.50844e-19
NZ_CP045641.1\|WP_023319341.1\|109015_109705_-\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	gnl\|CDD\|236837	PRK11081, PRK11081, tRNA guanosine-2'-O-methyltransferase; Provisional.	4.37693e-173
NZ_CP045641.1\|WP_023319346.1\|91406_93122_-\|AsmA-family-protein	gnl\|CDD\|282957	pfam05170, AsmA, AsmA family. The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.	8.93812e-18
NZ_CP045641.1\|WP_004205085.1\|105869_106880_-\|class-II-fructose-bisphosphatase	gnl\|CDD\|224411	COG1494, GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins [Carbohydrate transport and metabolism].	0
NZ_CP045641.1\|WP_135715985.1\|101557_102862_+\|citrate-transporter	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	1.53009e-22
NZ_CP045641.1\|WP_065697435.1\|93272_94664_-\|uracil-xanthine-permease	gnl\|CDD\|273276	TIGR00801, Uric_acid_permease, uracil-xanthine permease. The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However, two closely related rat members of the family, SVCT1 and SVCT2, localized to different tissues of the body, cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39). [Transport and binding proteins, Nucleosides, purines and pyrimidines].	5.78002e-142
NZ_CP045641.1\|WP_004873089.1\|96265_97777_-\|glycerol-kinase-GlpK	gnl\|CDD\|234594	PRK00047, glpK, glycerol kinase GlpK.	0
NZ_CP045641.1\|WP_053809859.1\|100728_101493_+\|CDP-diacylglycerol-diphosphatase	gnl\|CDD\|235485	PRK05471, PRK05471, CDP-diacylglycerol pyrophosphatase; Provisional.	9.98883e-156
NZ_CP045641.1\|WP_004205090.1\|99490_100480_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182700	PRK10752, PRK10752, sulfate ABC transporter substrate-binding protein.	0
NZ_CP045641.1\|WP_023319342.1\|106928_109010_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0

>NZ_CP045641.1|WP_004205090.1|99490_100480_+|sulfate-ABC-transporter-substrate-binding-protein
MNKWGVGLTLLLASASVLAKDFQLLNVSYDPTRELYEQYNKAFSAHWKQETGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKNWLKRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHQNHGDQAKAQDFVKALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVDKKGTRQVAEAYLKYLYSPEGQEIAAKNFYRPRDPNVAKKYANEFPKLKLFTIDQEFGGWTKAQKEHFSNGGTFDQISQR
>NZ_CP045641.1|WP_004150222.1|99092_99338_+|septal-ring-assembly-protein-ZapB
MTMSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKEQQQGWQERLQALLGRMEEV
>NZ_CP045641.1|WP_004205091.1|97798_98650_-|aquaporin
MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISIIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDGRKVVPFIISQFAGAFCAAALVYGLYYNLFLDYETTHHMVRGSVESLDLAGIFSTYPNPHINFVQAFAVEMVITAILMGVILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDIGPKAFAWLAGWGDVAFTGGKDIPYFLVPLCAPVVGAALGAFSYRKLIGRHLPCDTCVDEEQESPSSSSTQHKASL
>NZ_CP045641.1|WP_004873089.1|96265_97777_-|glycerol-kinase-GlpK
MTDKKYIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPKPGWVEHDPMEIWASQSSTLVEALAKADINSDQIAAIGITNQRETVVVWERETGKPIYNAIVWQCRRTAEICEQLKRDGMEEYIRKATGLVVDPYFSGTKVKWILDHVEGSRERAKRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHDLDWDDKMLDALDIPRAMLPEVRKSSEVYGQTNIGGKGGTRIPIAGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVTSTHGLLTTIACGPRGEVNYALEGAVFMAGASIQWLRDEMKLISDAFDSEYFATKVKDTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNSNHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYSGWKKAVKRALAWEEHDEA
>NZ_CP045641.1|WP_004901437.1|94948_96151_+|sodium/glutamate-symporter
MFHLDTLSTLVAATLVLLLGRKLVQTVPLLKKYTIPEPVAGGLLVALALLVLKKSMDIDIDFDMSLKDPLMLAFFATIGLNANLASLRAGGKVLGTFLIVVVGLLLLQNALGIGMAKLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFVERYGFANATEVAMACATFGLVLGGLIGGPVARYLVKHSSSPDGTPDDQVAPTAFEKPDVGRVITSLVLIESIALIAICLTVGKVVAQLLAGSVFELPTFVCVLFIGVILSNSLALAGLYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELASLALPMIIILAVQAVAMALYAVFVTYRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLLLPIFG
>NZ_CP045641.1|WP_065697435.1|93272_94664_-|uracil-xanthine-permease
MSVNTAESENAQPVAHKPASELIYRLEDRPPLPQTLFAAFQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVLSRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMADHTFGAPKNLLLAGIVLALIIILNRQRNPYLRIASLVIAMAAGYLAAWFLDMLPANTAPTNSSFITVPTPLYYGLGIDWSLLLPLMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPDWLKNLLSSGIAAGGITAIVLNLIFPPEKA
>NZ_CP045641.1|WP_023319346.1|91406_93122_-|AsmA-family-protein
MKFLGKLILWLLVALLLVIVGAWFLLQTHWGARQASAWLSNGTGWQVSFDAMDHNFSSPLHVQLQNVTFGREGKPATLVAKTVDIGFSTRQFSDPLHADEIVLNDGTLNLSPHSADLPFAADRLMLRNMAFNSPETGWALSAQRVTGGVSPWAPEAGNVLGKTAQIQMSAGSMTLNGVEASNVLIQGKIDQGEVTLSTLGADVARGTLTGNAKRSADGSWLVDNLQLNEIRLQSAASLADFFAPLTTVPSLQIGRLDITDARLQGPDWAVTDLDLSLRNLTLSHGGWQSQDGTLSMNASEFIYGSLHFFDPILNAEFSPQGIALRQFSSRWEGGMVRTSGNWLRAGNALVLDDTAFAGLEYTLPANWKPLWMAPLPAWLQSLTLKKFSASRNLIIDVDPAFPWQITALDGYGGELQLVKNGSWGVWNGSATLNAAAATFNRIDVRRPSLKLSATASTVNITELSAFTERGILQATAAVSQLPQRQVNLSLNGRGVPLNILQAWGWPSLPISGDGNLQLTASGSVQADAPLKPTVNAQLSAVNMEKQQVAQTMRNGEVNTAPAAPAPTPVTP
>NZ_CP045641.1|WP_128335894.1|89595_91155_-|PTS-glucose-transporter-subunit-IIBC
MPEIRQRILENMQKFSRAMIGAVLFLPVIGLILALSSVLTNPTLIAETSFLHQLGQMLGDTFWPLFGNLGLLFCVGISYGLAKDKKTEVALVAVMCFIMFLGANHSWLEHTHGLAEKINGEYYGTGQTQLLGFVVVDMGVFLGIILGCTIAWVHNKVSTIELPGALSMYGGAKLTLVAMTPVVIFYAIAFTWLWPFMTHGISALTGFMKNAGVAGVFVYGFFEKFLIPTGLHHFVWSPFQLTQIGGTLNVDGQVVSGTQAIFLAYMRHPDLTPVMNEALRFSQQGMTTIFGLAGASLAFYHTAKPEKKVMAKAILLPAIITSMLTGITEPIEFTFLFVSPLLWVIHATLTAASQAICDLFTVRPWGASGLIEFLIYNLPLPVSLTRWPGYVLIGIGQFAVYYVIFRTLVVKLNLKTPGREDDENVKLYSKAEYRQKVAQPQSVTDDIIRGLGGKENILSVDNCFTRLRVAVRDMARVDDAQLKNTGANGVVRNRNEVQVIYGVKVGQVRSRVDNWLAEN
>NZ_CP045641.1|WP_023319347.1|88203_89583_-|6-phospho-beta-glucosidase
MKLTVLGGGGVRSAFLAKSLAYNAHRIGLTEVVFLDNSADNLAIFGEIARYVFTTIRPDIHFTTTTDPVAALQNANYIITTLRVGGDESRIRDERIALQHNTLGQETTGAGGFAMAMRSIPAILDYCRLIEAHAAEDAILFNFTNPSGLVTEAIVKSGFKRRVYGICDAPSELIRELPAILGCEERDLSVECYGLNHFSWFTHFTVRGEAVTERLIASPALYQKTAMQYFSPELVRLCDNQLLNEYLYYYYYRDEALKAIQGAGETRGEQIARINQEMRQALRTVDARTQPEAAFNIWMQHYLRRENSYMQNESRQEKFHTREPLTLRQFIEEPDTGGYAGVALDILEAVNSTTTKRIVVSIQNNGTLDFLRPDDVIEISCDLSREGLKPVTPVKVPTAQKNMISCVKEYERLAVAAILQQDKSLAVRALMAHPLIGSYSLAKTLVEAYLDDEQFAAWR
>NZ_CP045641.1|WP_004205097.1|87006_87729_+|MurR/RpiR-family-transcriptional-regulator
MDVENIFRDVKLSKTEMTVLRFIQNDPEQCIRQGVRAVAEQCYSNPSSLVRLAKKLKFSGWLELVYFIKFNITMPKLDVTNDIDYMSIQPAEALTPLLASLAQQRVLIHGSGFSQLIAQYIYNKFLVTGVNASLALWPDYEILEQKNAARFDSIWIISKSGRSSSALNWVKALEGKEINLVCFTGDYQSPLAQAADTAFIIHDPQKFDDDIYWSNPFFGYCILGFERLLKMWFTRVRSNS
>NZ_CP045641.1|WP_053809859.1|100728_101493_+|CDP-diacylglycerol-diphosphatase
MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNLKGGYVLFKDRNGPLQYLLMPTYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVPDNVVSLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAAISSRWLPLPGGLQGHEYLARRVTEAELAQRSPFLMLAEEVPEARQHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAEEIQDHRCAILNANH
>NZ_CP045641.1|WP_135715985.1|101557_102862_+|citrate-transporter
MSLWLTHPLFLPSLIVGVTIVLWATSLLPEFITALLFFAAAMMAKIAPPEVIFGGFASSAFWLVFSGFVLGIAIRKTGLADRAAQALSARLTDSWPRMVASVVLLSYALAFVMPSNMGRIALLMPIVAAMARRAGIADGSRGWFGLALAVGFGTFQLSATILPANVPNLVMSGAAEGSYGIHLNYVPYLLLHTPVLGWLKGAALVALICWLFPGKPHPPRDLAPLPAMSRDKKRLAWLLAVVLMLWVTESWHGIGPAWTGLAAAVVTLLPRVGFISGEEFASGVNMRTCIYVAGILGLAIAVTQTGIGGAVGNALLQVMPLDKDNPFTSFLALTGITSALNFIMTANGVPALYTTFAQSFADATGFPLLSVIMIQVLGYSTPLLPYQASPIVVAMGLGKVPARAGMLLCLALAAVSYLILLPLDYAWYQLLGKL
>NZ_CP045641.1|WP_002922909.1|102954_103722_-|triose-phosphate-isomerase
MRHPLVMGNWKLNGSRHMVNELVANLRTELAGVSGCAVAIAPPEMYLDLAKRAAEGSHIHLGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGVVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKADAKIAEQVIIQYGGSVNAGNAAELFTQPDIDGALVGGASLKADAFAVIVKAAEAAKKA
>NZ_CP045641.1|WP_043522751.1|103831_104431_-|YiiQ-family-protein
MKKWTILCFSGLMGLAVGPHALSAESESTTAAPYLLAGAPSFDLSISQFREKFNVDNPKLPLNEFRSISTSRDRANLTRAASKINENLYASTALERGTLKIKSMQITWLPIQGPEQKAAKAKALEYMSAMIRAFVPTLSPAQSQQKLQKLLTAGKGKRYFSDTEGAVRYVVADHGEKGLTFAVEPIKLALSETLEGNNK
>NZ_CP045641.1|WP_004173894.1|104543_104972_+|DUF805-domain-containing-protein
MTLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAAVVVKRLHDRGKSGLWALLMILAWMLLAGNWAMLPQVWQWGVGRFVPTLIIVMMLIDLGAFVGTQGENKFGKETQDVRWKADA
>NZ_CP045641.1|WP_032456734.1|104972_105719_-|ferredoxin--NADP(+)-reductase
MADWVSGKVTKVEYWTDALFSLYVRAPVHPFTAGQFTKLGLEIDGERVQRAYSYVNAPGNPDLEFYLVTVPEGKLSPRLAALKPGDEVQVVSEAAGFFVLEEVPDCDTLWMLATGTALGPYLSILQEGKDLERFTHLVLVHAVRYAADLSYLPLMRELEQRYAGKLRIQTVVSRETVEGSLTGRVPFLIETGALEEAVGLPMTRDTSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGHMTAEHYW
>NZ_CP045641.1|WP_004205085.1|105869_106880_-|class-II-fructose-bisphosphatase
MKRELAIEFSRVTEAAALAGYKWLGRGDKNSADGAAVNAMRIMLNLVNIDGTIVIGEGEIDEAPMLYIGEKVGTGQGDAVDIAVDPIEGTRMTAMGQANALAVMAVGDKGCFLNAPDMYMEKLIVGPGAKGAIDLNLPLEENLRNIARALNKPLGELTVTVLAKPRHDAAIAQLQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMQGRLLARHHVKGDSEENRRIGENELARCKTMGIEAGKVLRLDEMARSDNVVFSATGITKGDLLDGITRKGNMATTETLLIRGKSRTIRRIQSIHYLDRKDPDVQQHIL
>NZ_CP045641.1|WP_023319342.1|106928_109010_-|ATP-dependent-DNA-helicase-RecG
MSGRLLDAVPLSSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIADLLPGVYATVEGEVLNSNITFGGRRMMTCQISDGTGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDMSTPELQETLTPVYPTTEGIKQATLRKLTDQALELLETCAISELLPPELAQGMMSLPEALRTLHRPPPSLQLSELESGKHPAQQRLILEELLAHNLSMLALRAGAQRYHALPLGANDTLKNQLLASLPFKPTGAQARVTAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRSWFAPLGIEVGWLAGKQKGKARQAQQDAIASGEVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACTHEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGEMHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPDVQRIARHIHERYPLQAQALIERWMPETERYSNA
>NZ_CP045641.1|WP_023319341.1|109015_109705_-|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH
MNSQRYARICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTMASAAAGSNSWVQVKTHRTIADAVGHLKGQGMQILATHLSGKAIDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPEEQQRLLFEGGYPVLARVARQKGLPYPHVNEQGEVEADAAWWATMQAAR
>NZ_CP045641.1|WP_004205080.1|109866_111987_-|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase
MYLFESLNQLIQNYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVHDADVCYRVLGQMHSLYKPRPGRFKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGGESSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLAEIPPENIQRELDRMKLASLDDLLAEIGLGNAMSVVVAKNLQQGEAAAAPVPANASNHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQEFITEIKVDMFNHQGALANLTAAINTASSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN

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Crispr_ID: NZ_CP045641_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045641_2

1217351-1217455

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045641_2

>merge|NZ_CP045641|2|1217351-1217455|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTAAACTAAATTCTCTACGGTGGGACGCTGAAACCTACGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTT

>NZ_CP045641|2|2|1217351-1217455|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTT	AAACTAAATTCTCTACGGTGGGACGCTGAAACCTACGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045641.1\|WP_049093545.1\|1209001_1209637_+\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NZ_CP045641.1\|WP_087744867.1\|1224710_1225831_-\|IS3-like-element-ISSen4-family-transposase	unknown	unknown	gnl\|CDD\|372671
NZ_CP045641.1\|WP_049093539.1\|1213206_1213581_-\|PTS-sorbitol-transporter	unknown	unknown	gnl\|CDD\|226254
NZ_CP045641.1\|WP_032453753.1\|1219581_1219797_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP045641.1\|WP_004206851.1\|1229650_1229941_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
NZ_CP045641.1\|WP_075201809.1\|1214980_1217032_+\|DUF4238-domain-containing-protein	unknown	unknown	gnl\|CDD\|379425
NZ_CP045641.1\|WP_049093541.1\|1212229_1213210_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP045641.1\|WP_153245068.1\|1220293_1222543_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226121
NZ_CP045641.1\|WP_094334093.1\|1211205_1212219_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP045641.1\|WP_094334095.1\|1214590_1214947_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP045641.1\|WP_135716171.1\|1230012_1230354_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP045641.1\|WP_094334094.1\|1214211_1214496_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
NZ_CP045641.1\|WP_049093532.1\|1217476_1219546_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP045641.1\|WP_047025574.1\|1222532_1224569_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP045641.1\|WP_071549035.1\|1229184_1229661_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP045641.1\|WP_049093538.1\|1213577_1214099_-\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP045641.1\|WP_153245067.1\|1209708_1210911_-\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
NZ_CP045641.1\|WP_049092803.1\|1226030_1226669_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045641.1\|WP_053087193.1\|1208414_1208978_+\|6-phospho-3-hexuloisomerase	unknown	unknown	gnl\|CDD\|132171
NZ_CP045641.1\|WP_153245069.1\|1228591_1229074_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455

Protein	Function_ID	Function_description	E-value
NZ_CP045641.1\|WP_049093545.1\|1209001_1209637_+\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	1.35353e-95
NZ_CP045641.1\|WP_087744867.1\|1224710_1225831_-\|IS3-like-element-ISSen4-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	1.12638e-34
NZ_CP045641.1\|WP_049093539.1\|1213206_1213581_-\|PTS-sorbitol-transporter	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	2.69864e-57
NZ_CP045641.1\|WP_032453753.1\|1219581_1219797_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	1.58638e-21
NZ_CP045641.1\|WP_004206851.1\|1229650_1229941_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	2.75632e-46
NZ_CP045641.1\|WP_075201809.1\|1214980_1217032_+\|DUF4238-domain-containing-protein	gnl\|CDD\|379425	pfam14022, DUF4238, Protein of unknown function (DUF4238). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 274 and 374 amino acids in length.	6.40682e-08
NZ_CP045641.1\|WP_049093541.1\|1212229_1213210_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	6.00967e-174
NZ_CP045641.1\|WP_153245068.1\|1220293_1222543_+\|AAA-family-ATPase	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	2.55064e-21
NZ_CP045641.1\|WP_094334093.1\|1211205_1212219_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.72336e-68
NZ_CP045641.1\|WP_094334095.1\|1214590_1214947_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.78013e-09
NZ_CP045641.1\|WP_135716171.1\|1230012_1230354_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	1.1894e-82
NZ_CP045641.1\|WP_094334094.1\|1214211_1214496_-\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	2.0796e-38
NZ_CP045641.1\|WP_049093532.1\|1217476_1219546_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP045641.1\|WP_047025574.1\|1222532_1224569_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.96638e-24
NZ_CP045641.1\|WP_049093538.1\|1213577_1214099_-\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	4.48309e-79
NZ_CP045641.1\|WP_153245067.1\|1209708_1210911_-\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	1.14653e-15
NZ_CP045641.1\|WP_071549035.1\|1229184_1229661_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	3.17506e-105
NZ_CP045641.1\|WP_053087193.1\|1208414_1208978_+\|6-phospho-3-hexuloisomerase	gnl\|CDD\|132171	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.	8.87221e-80
NZ_CP045641.1\|WP_153245069.1\|1228591_1229074_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.73713e-86

>NZ_CP045641.1|WP_075201809.1|1214980_1217032_+|DUF4238-domain-containing-protein
MSGRKQHYIPQLFLRGFLICQQSGQTHVYRRDKMFISKTDSVAAQRDFYSKPANDANKTLDDKLTDYEGRLGELLRILREKNVGTDVEASIAAEVIAHLTPRSKSLRSIFGHGTQKLISDLADVISDKTLMISLLGLDEPTTNKKWSEHIASSFNSNPEMAKSFEFVSEEIGIPKDSIERMLFMSAKESFLGDANPFYFQLQPLFTQLLTGTEDAISYGHKKVLNNGVVVEARKKSLESLLWRIFPAPQEGAIMPDCIAIGFDEEEGVYLPYIMASSISTVIMPLTSEKLLVGVRASNINVDLSRFNDDASECSDELFIAASSAHEYLRKNIGERWKNRMDNIVHDTLDTLCEHKGYDNLNVPESISCPSFSYQIAFNDWLSDDIEHINEVVQGVVAKLSQWLDLSRLDGITYASNFEKALEDIERSFDGNETPESEADYLAQGGAALLVKRDGKIKVRIVFHQNYAHALAGEDLQNREVAIHLLVSSLFIVHTINHFEYVLPEFLLEPVMMNNHPAVMHCAMRKALRAYYYAFASAEFGAEELLEQEFSHYAIRALDSNFSKIVSAKEEHKIDNNHSKFFSTVHAAVADILIAMARLIGHLQGINKSPLLNSDTDVGAAIAARELTGWVDVFAHDLERFWKQPSWIREDLYALNVHVERLLWPHGIFLFSSDSDQGTMILSV
>NZ_CP045641.1|WP_094334095.1|1214590_1214947_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCMFRGRVAIVIGKRLKISRVRADLTQAELGVLAGLDEESASARISSYEKEVHAPDFKLVCKLAAVLDVPEAYFYAVDDDLAELILQYHRFKKSNPGSTLLLSPNN
>NZ_CP045641.1|WP_094334094.1|1214211_1214496_-|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDVHPSAIWPERYLDTGNKREPRKPLHPMTTTDNSGT
>NZ_CP045641.1|WP_049093538.1|1213577_1214099_-|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTARMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSKRGNAP
>NZ_CP045641.1|WP_049093539.1|1213206_1213581_-|PTS-sorbitol-transporter
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGAQQALFELGHLTLVFNGDLNPCHIGAVHLSGPVPNLRDLHGNLVIEEGRP
>NZ_CP045641.1|WP_049093541.1|1212229_1213210_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVGSGKKVLSLTGREIHPVAIEIGALTESEIVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAHFITEDNYVSGVTVEQLVLVDTADVPESEPEAMPEPAPRVITTPPPARGAEKLVRMVEQTGTAVGHVIAQLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP045641.1|WP_094334093.1|1211205_1212219_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDAERCDDLAMSYGIMGYTRLETLLEEEAIDVVSVATPDPYHTESILTALRHGKHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELEKPEAGRILRGHISMDDVISVPTEWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAAGQKRLMAECGLDTFDSVQSLLTMANGSSWVVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPDMTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEALHRSLESGKPEDV
>NZ_CP045641.1|WP_153245067.1|1209708_1210911_-|DUF3883-domain-containing-protein
MLEFHNVPLKTILRRAIMSLPTNFNDILRLFEKDYDTAKEDNALSARGQFLQLYPLNRLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDETPLSQMFKAKILSLYFPEHFINICSKDHLKEIALEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPDDERYIEVKSIGRDGKEGAFRFFLSGNELTVSNLSNHRKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMTPCAYVVRFDLEEPA
>NZ_CP045641.1|WP_049093545.1|1209001_1209637_+|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEALVFIDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVHLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKARRKSRIAVAGGITSLTVKDYALLGPDVVIVGSAITHAADPADEARKISQVLLQYH
>NZ_CP045641.1|WP_053087193.1|1208414_1208978_+|6-phospho-3-hexuloisomerase
METQSVAGVACTDLHQAMARIDGAALARLEQAIADANAIFVFGAGRSLLMLKALAMRLMHIGLKVHVVGDVVTPALQKGDLLLLASASGETASLVNVATKAKQLGGTVALLTIFPESTLGKLANVVVRIPAYTDKLPDGPDNVKGILPGGSLFEEAVMVLGDAMIVNLAQSTGYRLTKGFALHANLE
>NZ_CP045641.1|WP_049093532.1|1217476_1219546_-|DUF927-domain-containing-protein
MKRAPFLNKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPVVLGPDELADLANLTIIRPDTLYVRVFRTGDIREEELLKIAVKLAHAGVQMARLMTPDGELLENWTGQLARLRQERPSDILPEHFRLDEEALWFDKLTERRDGESDIQPQRISSPLRVTAITCDSHDGSYGRLLEWHTTTGQSRRWAMPMAMLSGNGEELRRILLENGLTYISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHCGVYVLPDEVIGPDGNNVILQGSHYLTGGFAQSGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERLYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWVAFLTHDMDASTTLARELLRRYQTALMPDNAGNQVQRIVARFALLAVAGEMATLQGITGWQEGTAYDAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMVGFRRVEKDPLTGEEHTLFHILPEGWREMCRGFSPARAARLCQEAECLLPGSDGKYQSQVRLPEIGKARVYRLTSRILSI
>NZ_CP045641.1|WP_032453753.1|1219581_1219797_-|AlpA-family-transcriptional-regulator
MKTRVDSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTAIR
>NZ_CP045641.1|WP_153245068.1|1220293_1222543_+|AAA-family-ATPase
MNKKYISTGGFVYISFLKINNFRKFGENENIIGFVQSHSDSPQKDLVASSTTLVIGKNNSGKTTVTKALELLLSDSEKITGHDFNYNYSKMILKQNFDNKPHITPKLSFEIEIILDDMTNDLIGDFQPFIDVRKSLNEDVRKANIIIEYEVKIKADYIAKIEALKEDCSSGNHKPEAIFRKYLDILSKTQFRRRIKNYQDINVDTLTPKNIIDLRVISAAKNIHDKRLLTKSFNKIIKYMYECDEVEYKGILSLVDGNNENLTQNIKIKHQSGVERILAKIISDKDIGIELRSELTFDKLMSDLITYEHKDGEFLVPESQFGLGYASLVSIIGEIIDYTNQSLKETSQSRIRLLCIEEPEVFMHPQMQINFIRHIQEALNEILSSHLETLTSLKSQILITTHSSHILNSVIHSSNTFDDINYIYLKDGNAASVLLKDRDIANTKEKSLQFEFIKKHIKHQTPDLFFSDAIIFVEGITEERVLNSYIEDDPVLNRMHISVFRIDGAHAKVYEKLINKIQIPSLIITDIDFKKEVKRTDNSIVEHIKSNDNSCDVDDVDDVDDVDDVDDVDDVDDVDDVDDVDESDKIVEQISVLSEDLITTNATLRHFYRNRKVAALKDYYVKDNLMVVFQKDGIGIPTECPQKTYYATSFEEALILKNYNNDLLLDVLLKVIKKEIIKTLGSPRNVCNLAHNSRQLQKQLARKKSEFSNNLIFSLVTTEQHKPELPDYILKGLEWLTLKLKRDGVIYEI
>NZ_CP045641.1|WP_047025574.1|1222532_1224569_+|ATP-dependent-helicase
MKFELDQQQVEVEKNVEIELFKLIEKSESFYFISGAGSGKTHALITSVNKFINDNYTQLILNGQKLLCITYTNNAADEIKHRLGDNDLVITSTIHSYIWDLVKFHMDLLLDEHVIFLNEEIERIYSEIYELQTDNATLLKVRSLKEPQLDAIIDYILVDKNDFYESLKSASKFWTYLKGITDEEVFKHLKGNYQQLSTVFKKLVKSQEFKRCICNIEKKEEQYTTIKYFNTKNIEVLYKNIIGHNTLLIYASRLIQKYTLLSKCIIDAHPLIFIDEYQDTDENVINLFLSVDNIAKGGNKKMCLGFFGDPMQTIYKHSMHKESHSLKKLVKNINRRSHQNIVECINKIRGDNQDVKQKPIKIYAEQCCPSLIIESEKNYTNNYLSSIIQRHKSEWSINENSKLACLVLKNEMLSQLLGFEGLFSTMLDIYQTEHAKGFEMIGSEFLFREIRYAGSLPSILHDLLMPLYLLKRKANFSVSDFFNIKPISNHNLSDVLDSIKIIESLKVKCLSDFVHEISEIYVGQEAEIQSLISYNFHLVIDGLESAKEKIIDKCRFKDTEKIPQLLDELFKIDMEQFFLWLDFIYQTYPENLVSYLTCHASKGLEFDNVIIFLSDSFNRKEGYFSNLLNSDINSILEPQLESARRLLYVSSSRAVKNLKIYLFTNKEIDKSKVDYLFT
>NZ_CP045641.1|WP_087744867.1|1224710_1225831_-|IS3-like-element-ISSen4-family-transposase
MKKRFSDEQIISILREAEAGVPARELCRKHAISDATFYTWRKKYGGMEVPEVKRLKSLEEENTRLKKLLAEAMLDKEALQVALGRKLLTTDQKREAVMLMCDATGLSQRRACRLTGLSLSTCRYEAHRPAADAHLSGRITELALERRRFGYRRIWQLLRREGLHVNHKRVYRLYHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALSTGRRIKCLTCVDDFTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTDLGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDIVHARKIINDWRQDYNECRPHSTLNYQTPSEFAAGWRKGHSENEDSDVTN
>NZ_CP045641.1|WP_049092803.1|1226030_1226669_-|hypothetical-protein
MTSPIRQNLFERECDMPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPPEIKARSLKAVMKLSRHSRGRKWLKTLGDDALPDLTASTQPSQRGMHKRDKARENTARLCWLLVQLLVEETDGRYGASDKPASDQILRKLKALAQEREVPSDGLGRGTFYEVLKMGKEA
>NZ_CP045641.1|WP_153245069.1|1228591_1229074_-|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALLGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR
>NZ_CP045641.1|WP_071549035.1|1229184_1229661_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MILFALCLNVEPAMPQISRTALVPFSAEQMYQLVNDVKSYPDFLPGCTGSRVLEFGPTQMTAAVDVSKAGISKTFTTRNTLTSNQSILMSLVDGPFKKLIGGWKFIPLSPEACKIEFHLDFEFTNKLIEMAFGRVFKELAANMVQAFTSRAKEVYSAS
>NZ_CP045641.1|WP_004206851.1|1229650_1229941_+|RnfH-family-protein
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIADPKELRRQRAEKNAAK
>NZ_CP045641.1|WP_135716171.1|1230012_1230354_-|outer-membrane-protein-assembly-factor-BamE
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLAPNDVAKIRVGMTQQQVAYALGTPMMSDPFGTNTWFYVFRQEPGHEKVTQQTLILTFNNGGVLTNIDNKPALTSQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

626924 : 689177

Escherichia_phage(36.36%)

head,tRNA,tail,portal,capsid,integrase,transposase,plate,terminase,lysis,holin

attL 638855:638871|attR 677606:677622

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062914464.1\|626924_627257_+\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_025999194.1\|627298_628678_-	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	4.2e-31	28.2
WP_062914463.1\|628935_629490_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_004206096.1\|629730_630504_+	siderophore-interacting protein	NA	NA	NA	NA
WP_043520960.1\|630607_632257_-	glycerone kinase	NA	NA	NA	NA
WP_080841430.1\|632331_633753_-	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
WP_017899726.1\|633763_634396_-	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA
WP_004206091.1\|634406_635477_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_017899727.1\|636086_637184_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_048325771.1\|637285_639211_+	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
638855:638871	attL	NA	NA	NA	NA
WP_153245327.1\|639400_639730_-	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA
WP_009310076.1\|639764_640745_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.2e-184	98.5
WP_023319177.1\|640932_641508_-	HdeD family acid-resistance protein	NA	NA	NA	NA
WP_004205286.1\|641777_642410_+	YfdX family protein	NA	NA	NA	NA
WP_153245026.1\|642499_645742_-	transporter substrate-binding domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	5.2e-32	28.2
WP_004205283.1\|645746_646361_-	acid-sensing system DNA-binding response regulator EvgA	NA	NA	NA	NA
WP_153245027.1\|646712_647027_+	HdeB family protein	NA	NA	NA	NA
WP_004205279.1\|647095_647368_-	hypothetical protein	NA	NA	NA	NA
WP_153245028.1\|647770_648616_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_050597324.1\|650671_652135_+	hypothetical protein	NA	NA	NA	NA
WP_032440347.1\|652137_653139_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-191	98.2
WP_015959031.1\|653138_653714_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	5.2e-60	58.7
WP_001630878.1\|653843_654107_+	hypothetical protein	A0A218M4I5	Erwinia_phage	3.1e-44	100.0
WP_015959030.1\|654137_654647_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	4.4e-87	95.9
WP_065807954.1\|654654_654855_+	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	9.6e-30	92.4
WP_065807917.1\|654818_655157_+	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-53	92.9
WP_032433641.1\|655224_655452_+	DUF2732 domain-containing protein	A0A218M4I9	Erwinia_phage	2.6e-31	97.3
WP_015959027.1\|655451_655673_+	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	1.0e-32	91.8
WP_153245029.1\|655674_657891_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	93.5
WP_050516734.1\|658009_658450_+	DinI family protein	A0A218M4I0	Erwinia_phage	1.2e-67	95.6
WP_153245030.1\|658532_659264_+	hypothetical protein	Q37850	Escherichia_phage	1.0e-129	94.7
WP_153245031.1\|659386_660004_+	hypothetical protein	NA	NA	NA	NA
WP_153245032.1\|660319_661363_-\|portal	phage portal protein	M1SV64	Escherichia_phage	1.2e-166	82.1
WP_153245033.1\|661362_663132_-	oxidoreductase	A0A0F7LCK3	Escherichia_phage	6.3e-306	87.8
WP_153245034.1\|663297_664152_+\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	3.3e-127	81.3
WP_153245035.1\|664225_665284_+\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	2.9e-165	83.8
WP_153245036.1\|665287_666031_+\|terminase	terminase	Q94MJ2	Enterobacteria_phage	8.7e-100	80.3
WP_153245037.1\|666127_666607_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	2.6e-65	85.1
WP_004175163.1\|666606_666810_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	4.2e-25	80.6
WP_032433564.1\|666814_667105_+\|holin	holin	A0A0M5M1H1	Salmonella_phage	2.2e-35	80.6
WP_103448950.1\|667091_667589_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	7.9e-81	87.3
WP_153245038.1\|667585_668017_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	7.6e-40	64.0
WP_153245039.1\|668112_668580_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	4.8e-64	74.8
WP_044524766.1\|668572_669028_+	phage virion morphogenesis protein	O80313	Escherichia_phage	9.8e-46	65.1
WP_044524765.1\|669043_669787_+	hypothetical protein	NA	NA	NA	NA
WP_153245040.1\|669863_670499_+\|plate	phage baseplate assembly protein V	M1SV78	Escherichia_phage	2.2e-96	83.4
WP_023327805.1\|670495_670843_+\|plate	baseplate assembly protein W	A0A0F7LDQ1	Escherichia_phage	1.4e-44	76.5
WP_153245041.1\|670847_671756_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	5.8e-114	71.9
WP_153245042.1\|671748_672345_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	6.0e-51	52.4
WP_153245043.1\|672350_674576_+	endo-N-neuraminidase	A0A2P0QGN7	Salmonella_phage	4.6e-11	37.5
WP_064343221.1\|674589_674883_+	hypothetical protein	H2DE47	Erwinia_phage	3.7e-06	34.4
WP_102024477.1\|674975_676142_+\|tail	phage tail protein	S4TP62	Salmonella_phage	2.5e-45	49.3
WP_102024476.1\|676251_677433_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	7.9e-196	86.6
WP_048335307.1\|677446_677962_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	3.2e-69	75.6
677606:677622	attR	NA	NA	NA	NA
WP_032440325.1\|678022_678298_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.0e-33	79.8
WP_153245044.1\|678312_678450_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	4.9e-17	88.9
WP_153245045.1\|678442_680884_+\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	6.6e-298	73.5
WP_032420037.1\|680897_681377_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	6.9e-66	77.7
WP_064143469.1\|681376_682543_+	phage late control D family protein	Q7Y4C6	Escherichia_virus	8.1e-177	81.4
WP_032420109.1\|682610_682829_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	3.2e-34	88.9
WP_004205266.1\|683186_683693_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_004174339.1\|683792_685634_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7
WP_017899733.1\|685853_687599_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-75	38.5
WP_001144069.1\|687710_687926_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_002916879.1\|688163_689177_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	59.2

DBSCAN-SWA_2

1337928 : 1400393

Salmonella_phage(47.83%)

protease,tail,integrase,transposase,terminase,holin

attL 1334938:1334957|attR 1353697:1353716

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1334938:1334957	attL	NA	NA	NA	NA
WP_004151980.1\|1337928_1339395_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
WP_004201905.1\|1339462_1341040_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_153245071.1\|1341231_1342482_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	6.8e-206	84.9
WP_032441415.1\|1342498_1342690_-	hypothetical protein	NA	NA	NA	NA
WP_153245072.1\|1342686_1343280_-	adenine methylase	T1SA14	Salmonella_phage	9.6e-110	91.9
WP_040173672.1\|1343276_1343468_-	DUF1382 family protein	A0A0P0ZC60	Stx2-converting_phage	3.5e-13	62.7
WP_153245073.1\|1343464_1344139_-	hypothetical protein	M1F3E2	Salmonella_phage	1.5e-87	70.9
WP_048264082.1\|1344135_1344294_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
WP_023339275.1\|1344286_1344580_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
WP_004144294.1\|1344689_1344938_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	2.8e-31	78.0
WP_064148642.1\|1344988_1346011_-	recombination protein RecT	Q858E1	Salmonella_phage	1.4e-180	95.6
WP_110180082.1\|1346020_1346920_-	endonuclease	Q858E0	Salmonella_phage	2.2e-158	91.3
WP_096813190.1\|1346916_1347216_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	5.5e-21	55.6
WP_023339271.1\|1347582_1348164_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	2.7e-64	63.8
WP_071561489.1\|1348318_1348552_+	hypothetical protein	T1SAR5	Salmonella_phage	1.2e-23	66.2
WP_153245074.1\|1348898_1350080_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	6.1e-148	65.1
WP_153245075.1\|1350069_1350834_+	DNA replication domain protein	G9L6A8	Escherichia_phage	5.0e-58	89.1
WP_059065294.1\|1350959_1351304_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	9.1e-52	85.1
WP_153245076.1\|1351496_1352036_+	hypothetical protein	R9TME7	Aeromonas_phage	1.1e-08	41.3
WP_032422957.1\|1352313_1352583_+	hypothetical protein	NA	NA	NA	NA
WP_153245077.1\|1352579_1353125_+	hypothetical protein	NA	NA	NA	NA
WP_153245078.1\|1353262_1353679_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153245079.1\|1353852_1354182_+	hypothetical protein	K7PGV5	Enterobacterial_phage	3.0e-28	56.1
1353697:1353716	attR	NA	NA	NA	NA
WP_115195744.1\|1354239_1354824_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	1.7e-90	88.6
WP_153245080.1\|1354820_1356296_+\|terminase	terminase	Q858H3	Salmonella_phage	7.9e-278	92.0
WP_153245081.1\|1356298_1357084_-	hypothetical protein	NA	NA	NA	NA
WP_004152472.1\|1357843_1358047_+	hypothetical protein	NA	NA	NA	NA
WP_153245082.1\|1358050_1359730_+\|tail	phage tail protein	T1S9Z7	Salmonella_phage	6.2e-194	59.3
WP_073520068.1\|1359726_1360032_+	hypothetical protein	Q2A090	Sodalis_phage	1.4e-16	51.3
WP_004152468.1\|1360313_1360712_+	peptidase	T1SAP9	Salmonella_phage	5.6e-37	59.5
WP_004197367.1\|1360724_1361732_+	bbp17	T1S9H9	Salmonella_phage	2.1e-181	92.8
WP_004152466.1\|1361741_1362134_+	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
WP_004152465.1\|1362126_1362405_+	hypothetical protein	T1SA01	Salmonella_phage	6.7e-21	58.9
WP_004197381.1\|1362453_1363065_+	hypothetical protein	T1SAQ2	Salmonella_phage	9.2e-47	48.8
WP_153245083.1\|1363064_1365542_+	hypothetical protein	G9L6D0	Escherichia_phage	9.8e-265	56.0
WP_100756938.1\|1365543_1366014_+	hypothetical protein	Q858G2	Salmonella_phage	1.6e-43	55.3
WP_153245084.1\|1366006_1366504_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	2.3e-24	42.3
WP_138920379.1\|1366516_1369015_+	hypothetical protein	A0A193GYI3	Enterobacter_phage	2.6e-289	61.2
WP_080892693.1\|1369011_1370817_+	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	5.3e-236	72.8
WP_153245085.1\|1370820_1373295_+	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	86.5
WP_048336786.1\|1373490_1373787_+	hypothetical protein	A0A2R9YJP3	Escherichia_phage	1.7e-46	93.8
WP_135769681.1\|1374080_1374713_-	hypothetical protein	NA	NA	NA	NA
WP_153245086.1\|1374907_1375588_-	anti-repressor protein	A0A193GYJ9	Enterobacter_phage	3.6e-68	57.6
WP_153245087.1\|1375907_1376204_-	hypothetical protein	T1SA06	Salmonella_phage	1.4e-24	64.3
WP_153245088.1\|1378893_1379163_+	hypothetical protein	NA	NA	NA	NA
WP_004146394.1\|1379270_1379675_+	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_071443771.1\|1379661_1379967_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	7.8e-39	80.4
WP_153245089.1\|1379956_1380586_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	5.6e-92	77.9
WP_153245090.1\|1380582_1381083_+	DUF2514 family protein	Q858E9	Salmonella_phage	1.2e-68	88.1
WP_153245091.1\|1381313_1382540_-	MFS transporter	NA	NA	NA	NA
WP_135715861.1\|1382638_1383526_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004201910.1\|1383623_1383815_-	DUF2633 family protein	G9L6F2	Escherichia_phage	8.6e-20	81.0
WP_017900442.1\|1384167_1386396_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_004201914.1\|1386451_1387984_-	exopolyphosphatase	NA	NA	NA	NA
WP_002913838.1\|1387987_1390048_-	polyphosphate kinase 1	NA	NA	NA	NA
WP_004201920.1\|1390227_1390869_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.0e-28	41.1
WP_004201922.1\|1390865_1391903_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.8e-71	44.5
WP_017900443.1\|1392166_1393060_+	ROK family protein	NA	NA	NA	NA
WP_017900444.1\|1393069_1394500_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_004201927.1\|1394726_1395353_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_017900445.1\|1395439_1396726_+	uracil permease	Q9KX94	Enterobacteria_phage	2.4e-65	38.1
WP_020947395.1\|1396824_1397526_+	DnaA inactivator Hda	NA	NA	NA	NA
WP_064178304.1\|1397522_1398434_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.9e-73	57.9
WP_004201931.1\|1398560_1398920_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.1e-18	45.6
WP_153245092.1\|1398929_1400393_-\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA

DBSCAN-SWA_3

1744475 : 1756750

Enterobacteria_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111460059.1\|1744475_1745882_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	2.8e-38	28.7
WP_153245118.1\|1746105_1747170_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.2e-106	55.3
WP_000676431.1\|1747196_1748066_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.8e-111	66.3
WP_044650166.1\|1748097_1748988_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.3e-27	32.9
WP_080935511.1\|1749002_1749557_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_000704810.1\|1749737_1750904_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.5
WP_000429184.1\|1751326_1751449_-	small membrane protein	NA	NA	NA	NA
WP_153245119.1\|1751848_1752853_-	SDR family NAD(P)-dependent oxidoreductase	E3T4Y8	Cafeteria_roenbergensis_virus	6.1e-32	30.1
WP_153245120.1\|1753928_1755344_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.1e-53	30.8
WP_012967600.1\|1755367_1756750_+	phosphomannomutase CpsG	A0A127AWJ1	Bacillus_phage	4.2e-31	25.8

DBSCAN-SWA_4

2623322 : 2634207

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153245186.1\|2623322_2626430_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.7
WP_004205989.1\|2626484_2627750_+	MFS transporter	NA	NA	NA	NA
WP_004205990.1\|2627780_2628869_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.9e-204	96.7
WP_064187371.1\|2628955_2629216_-	hypothetical protein	A0A077SK33	Escherichia_phage	7.8e-40	96.5
WP_063860914.1\|2629512_2630373_+	class A broad-spectrum beta-lactamase OKP-B-2	A0A077SL40	Escherichia_phage	1.4e-141	88.8
WP_004205996.1\|2630393_2631155_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.0e-131	98.4
WP_004205998.1\|2631415_2632318_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.8e-155	97.7
WP_017900344.1\|2632328_2633594_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.3e-217	92.4
WP_065903412.1\|2633586_2634207_+	aldolase	A0A077SK32	Escherichia_phage	1.0e-109	94.2

DBSCAN-SWA_5

3320790 : 3330252

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_135715794.1\|3320790_3322512_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	9.9e-14	32.5
WP_053810603.1\|3322551_3323256_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3323606_3323825_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_004201360.1\|3323948_3326228_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.8e-165	42.0
WP_002896520.1\|3326258_3326576_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3326901_3327123_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_135715795.1\|3327199_3329140_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.5e-37	40.5
WP_004201357.1\|3329136_3330252_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_6

3373914 : 3415412

Salmonella_phage(38.1%)

transposase,holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153245232.1\|3373914_3374952_+	acyltransferase family protein	A9YX16	Burkholderia_phage	4.9e-16	27.1
WP_153245233.1\|3375314_3377357_-	hypothetical protein	NA	NA	NA	NA
WP_153245234.1\|3377608_3378490_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	9.5e-29	60.2
WP_101827685.1\|3378489_3379263_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	1.4e-76	53.7
WP_153245235.1\|3379259_3380456_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	1.9e-157	72.9
WP_004152573.1\|3380455_3380809_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_153245236.1\|3380810_3381467_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	1.2e-73	57.5
WP_153245237.1\|3381529_3381976_-	hypothetical protein	NA	NA	NA	NA
WP_153245238.1\|3381978_3382329_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	1.0e-26	80.8
WP_153245239.1\|3382331_3383396_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	1.4e-135	68.4
WP_020804067.1\|3383398_3383626_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	5.6e-18	52.0
WP_025269945.1\|3383701_3384277_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	5.0e-63	66.0
WP_153245240.1\|3384276_3386199_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	3.7e-195	56.9
WP_016244729.1\|3386188_3386341_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	1.4e-17	84.0
WP_153245241.1\|3386382_3386832_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	8.2e-37	55.3
WP_032454867.1\|3386835_3387276_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	2.8e-61	78.8
WP_153245242.1\|3387286_3388438_-	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	2.3e-176	81.2
WP_153245243.1\|3388439_3388991_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	3.4e-40	44.9
WP_009652660.1\|3388983_3389388_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-43	71.5
WP_080895756.1\|3389387_3389894_-	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	1.8e-16	37.2
WP_048265719.1\|3389890_3390310_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.5e-40	61.5
WP_153245244.1\|3390278_3390560_-	hypothetical protein	NA	NA	NA	NA
WP_153245245.1\|3390599_3391541_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	6.6e-137	77.1
WP_000528476.1\|3391552_3392047_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_153245246.1\|3392050_3393253_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.2e-103	52.9
WP_025714258.1\|3393262_3393457_-	hypothetical protein	NA	NA	NA	NA
WP_153245337.1\|3393502_3394051_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_023158898.1\|3394106_3395558_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.4e-191	68.6
WP_071570694.1\|3395796_3397197_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.2e-187	69.0
WP_153245247.1\|3397147_3397924_-	hypothetical protein	G8C7P2	Escherichia_phage	1.6e-11	60.4
WP_048293385.1\|3398175_3398805_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	3.9e-85	72.2
WP_153245248.1\|3398807_3399146_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	4.9e-34	63.3
WP_080899539.1\|3399532_3400057_+	hypothetical protein	NA	NA	NA	NA
WP_153245249.1\|3400833_3401433_-	hypothetical protein	H9C175	Pectobacterium_phage	6.6e-66	58.4
WP_153245250.1\|3401429_3402074_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	3.4e-100	78.6
WP_023158891.1\|3402070_3402376_-	DUF968 domain-containing protein	Q6V7S4	Burkholderia_virus	1.2e-23	57.4
WP_153245251.1\|3403240_3403405_-	hypothetical protein	H6WRY4	Salmonella_phage	9.0e-18	75.5
WP_153245252.1\|3403582_3403897_-	hypothetical protein	A0A220NQY7	Salmonella_phage	2.6e-05	36.6
WP_153245253.1\|3404737_3405055_-	hypothetical protein	S5VZS4	Pseudomonas_phage	2.4e-27	52.9
WP_040214076.1\|3405243_3406212_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153245254.1\|3406223_3406718_-	hypothetical protein	Q716F4	Shigella_phage	6.3e-06	35.6
WP_153245255.1\|3406707_3406983_-	antitoxin	NA	NA	NA	NA
WP_153245256.1\|3406979_3407384_-	hypothetical protein	R9TME7	Aeromonas_phage	1.3e-09	36.3
WP_153245257.1\|3407380_3408166_-	hypothetical protein	A4JX52	Burkholderia_virus	3.4e-62	51.3
WP_153245258.1\|3408378_3408774_-	hypothetical protein	NA	NA	NA	NA
WP_153245259.1\|3408800_3409874_-	hypothetical protein	K7PLZ7	Enterobacterial_phage	3.6e-30	39.8
WP_032413998.1\|3410139_3410553_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	7.6e-45	70.5
WP_023297269.1\|3410552_3410822_-	hypothetical protein	NA	NA	NA	NA
WP_077253154.1\|3410872_3411379_+	helix-turn-helix domain-containing protein	A0A0R6PH50	Moraxella_phage	3.0e-11	46.8
WP_153245260.1\|3411582_3411801_+	hypothetical protein	NA	NA	NA	NA
WP_075206951.1\|3411766_3411961_-	hypothetical protein	NA	NA	NA	NA
WP_153245261.1\|3412438_3412732_+	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_130948996.1\|3412804_3413026_+	hypothetical protein	NA	NA	NA	NA
WP_135608847.1\|3413257_3413482_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	5.2e-16	54.1
WP_023297263.1\|3413478_3413823_+	hypothetical protein	NA	NA	NA	NA
WP_023297262.1\|3413910_3414126_+	hypothetical protein	NA	NA	NA	NA
WP_153245262.1\|3414125_3415412_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	4.3e-123	54.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045641

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection