CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045643	Streptomyces sp. QMT-28 chromosome, complete genome	16 crisprs	csa3,WYL,DEDDh,cas3,Cas9_archaeal,cas4,casR	5	20	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045643_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_1

806028-806113

Orphan

Consensus_repeat	Method
GCCGGTCCGTCCGTTCTCGCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_1

>merge|NZ_CP045643|1|806028-806113|CRISPRCasFinder
GCCGGTCCGTCCGTTCTCGCGGGGGTCGCGTCCGTCTCCGCCGCGGTCGCGTCCGCCTTCGCCGCCGGTCCGTCCGCTCTCGCGGG

>NZ_CP045643|1|1|806028-806113|CRISPRCasFinder
GCCGGTCCGTCCGTTCTCGCGGG	GGTCGCGTCCGTCTCCGCCGCGGTCGCGTCCGCCTTCGCC
GCCGGTCCGTCCGCTCTCGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153286805.1\|795537_796440_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|367788
NZ_CP045643.1\|WP_153286815.1\|809489_809981_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292700.1\|799639_800047_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP045643.1\|WP_153286808.1\|798555_799626_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187538
NZ_CP045643.1\|WP_153286804.1\|794173_795529_+\|coproporphyrinogen-III-oxidase-family-protein	unknown	unknown	gnl\|CDD\|181292
NZ_CP045643.1\|WP_153286818.1\|814989_815670_-\|response-regulator	unknown	unknown	gnl\|CDD\|225107
NZ_CP045643.1\|WP_153286811.1\|801856_803284_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP045643.1\|WP_153286812.1\|803393_805718_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP045643.1\|WP_153286821.1\|821126_821318_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292701.1\|817108_818641_+\|multicopper-oxidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225043
NZ_CP045643.1\|WP_153286807.1\|797573_798491_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378976
NZ_CP045643.1\|WP_153286816.1\|810263_811388_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153286806.1\|796485_797460_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235736
NZ_CP045643.1\|WP_153286809.1\|800252_800723_+\|DUF1348-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP045643.1\|WP_153286820.1\|818650_820885_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP045643.1\|WP_153286813.1\|806237_806948_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP045643.1\|WP_153286817.1\|812297_814847_+\|sialidase	unknown	unknown	gnl\|CDD\|366285
NZ_CP045643.1\|WP_153286810.1\|800855_801860_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP045643.1\|WP_153286819.1\|815666_816881_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP045643.1\|WP_153286814.1\|807085_809434_+\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|273765

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153286805.1\|795537_796440_+\|radical-SAM-protein	gnl\|CDD\|367788	pfam04055, Radical_SAM, Radical SAM superfamily. Radical SAM proteins catalyze diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.	0.000355824
NZ_CP045643.1\|WP_153286819.1\|815666_816881_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.28819e-32
NZ_CP045643.1\|WP_153292700.1\|799639_800047_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.61155e-29
NZ_CP045643.1\|WP_153286808.1\|798555_799626_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187538	cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs. This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.93612e-96
NZ_CP045643.1\|WP_153286804.1\|794173_795529_+\|coproporphyrinogen-III-oxidase-family-protein	gnl\|CDD\|181292	PRK08208, PRK08208, coproporphyrinogen III oxidase family protein.	0
NZ_CP045643.1\|WP_153286818.1\|814989_815670_-\|response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.23028e-67
NZ_CP045643.1\|WP_153286811.1\|801856_803284_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	1.003e-148
NZ_CP045643.1\|WP_153286812.1\|803393_805718_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	3.2922e-28
NZ_CP045643.1\|WP_153292701.1\|817108_818641_+\|multicopper-oxidase-domain-containing-protein	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.5615e-78
NZ_CP045643.1\|WP_153286807.1\|797573_798491_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	9.46247e-34
NZ_CP045643.1\|WP_153286820.1\|818650_820885_+\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	3.06758e-57
NZ_CP045643.1\|WP_153286806.1\|796485_797460_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235736	PRK06196, PRK06196, oxidoreductase; Provisional.	1.08465e-102
NZ_CP045643.1\|WP_153286809.1\|800252_800723_+\|DUF1348-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	3.82173e-90
NZ_CP045643.1\|WP_153286813.1\|806237_806948_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	5.30469e-21
NZ_CP045643.1\|WP_153286817.1\|812297_814847_+\|sialidase	gnl\|CDD\|366285	pfam00754, F5_F8_type_C, F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.	5.8533e-25
NZ_CP045643.1\|WP_153286810.1\|800855_801860_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.93358e-56
NZ_CP045643.1\|WP_153286814.1\|807085_809434_+\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|273765	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c., oxidoreductase alpha (molybdopterin) subunit. This model represents a well-defined clade of oxidoreductase alpha subunits most closely related to a group of formate dehydrogenases including the E. coli FdhH protein (TIGR01591). These alpha subunits contain a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulfur clusters and cytochromes. The particular subunits with which this enzyme interacts and the substrate which is reduced is unknown at this time. In Ralstonia, the gene is associated with the cbb operon, but is not essential for CO2 fixation.	0

>NZ_CP045643.1|WP_153286812.1|803393_805718_-|SpoIIE-family-protein-phosphatase
MEGRGRPPSRPRGRSRSQRTVCPGELEEAGMQAHETWFTLTEDGGVTDWTHAATEATGMSAPEAEGISAGHLLGRLLGPDADCALNLEVGRDADDGDIRVWAVRHRAEDTIGSIFDQSVAGLEIYDLNLCVLRSNPTALAMRGLPADQVLHRPVADLGPGLPLAPLLDQVLTGCLPAVGGEIRGRDPTGGPHTYHVTAYLLHGVCHEPVGIATVIHDISERTRTQAAAELLALARGRIGTTLDATRTAQELAAVAVKDFADVASVDLLDAVLRGDDPPEPPVDADVPMRRAAFEGKDWMTGVYAVGEPSRFVYPTPYTQVLADLAPRLVDPHATPSEWLMHDGARAGALQRAGIHSMIVTPLAVHGRVLGLACFYRGPRHPEPFTTDDVPLAAELGNNAAIHIENARRYVREHTVAISLQRSLVPRVLPTVSAISTCHFHLPGIGQALWFDVIELSSARVGLVIGRIPDQGLAAAATVGRFRTAVSTLAALDLSPDELLAHLDDAAQRIAREGSSPASCGAAHACCQYAVYDPVGGHLTMASAGWPPPLITPAEGVTPDSLQRIVGPPLGNHASYESVHVPLVPESLLTLYSPSLLGTGPQADERLSLLREISGRPATDPKATCDAVVYSLLREPPADGVALLAVRTHRLPRDQVASWRFPPEASAVADCRHRVRGQLERWGLDSHAFTAEMVVSELVTNVIRHATGTATVRLIRDQSLTLEVSDEATTAPHLRHARIQDEDGRGLLIVAALTDRWGTRYTEEGKTVWTEEPLP
>NZ_CP045643.1|WP_153286811.1|801856_803284_-|cytochrome-ubiquinol-oxidase-subunit-I
MDRVSHPVSKALAAVGDPSQLLPAREQMAFTLGFHIILVPFGVALTALMLIAHYRGLRHGDGDALRLARRWSKVAAVLFAVGAITGTVLSFELGILWPGLMGDYGAAFGMPFAVEGLFFFLEAIFVSIYLYGWNRLPPWAHFWTGVPVVLASLGGAAAVIAANSWMNQPGGITLRDGHVTAVRPLRVFFNGAFWYETVHMLLAAYIVAGFTVAGVYAAGMLKGRRDRHHRLGFLIGFLVAAAAIPVQIFVGDTVARQVFQDEPAKFAAIELLPATGDHVPENLGGFLVDGKVRYGLPVPDMASILAGFTPSTEIKGLEAIPAEVRPTDRSVTIVHLAFDVMVGTTFLMFGLVLWFAWLWWRGRTMPTNRWFLRGAAVSGLVAVVCLESGWVVTEVGRQPWTVVGLLLTRQAVTTRGNLWPLFGATVALYAAVGIGAVLVLRGMARHWRTAGDETVYVPYGPEQPFAASGTAGEER
>NZ_CP045643.1|WP_153286810.1|800855_801860_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MNLSDVVALVMFVGVVAYALFGGADFGAGFWDLTAGGAERGKNPRHLVDLSIGPVWEANHTWLIYCLVMLWSGFPTAFAAITTTLYLPLVLAALGIVLRGAGFAFRKVSVRTPQQRLNGTLFAASSVLTPYCFGSIAGGIASGRVPSGGNGDAVTSWLNPTSVLGGILAVVSCAYLAAFYLATAAHRLDDAGLERYFRHRALLAGAVAGVVSIAGIFVLRTDAPRLFHQLSHRGLPLMALAALCGIVGMAGARLGRRAGRREIAALAIAAVVVGWGVAQYPFLLGTHLRIHEAAAPDTTLAVLLGVACVAALIILPSLILLFRLSGQGRLRART
>NZ_CP045643.1|WP_153286809.1|800252_800723_+|DUF1348-family-protein
MAGKPPYPPFDAESAVLKVRAGEDAWNTRDPEKVSLAYTEDSRWRNRSLFINGREEIVDFLTRKWENEREYRLIKELWAFGGNRIAVRFAYEYHTATGDWFRAYGNENWEFGDDGLMSVRHASINDVPITASERAFDWDRSGPRPPDYPSLSDFGF
>NZ_CP045643.1|WP_153292700.1|799639_800047_-|MerR-family-transcriptional-regulator
MARRSGFSEPTLRYYEKVGLLGVVGRDESSGHRRYEPATADRVVALACLRSAGMTVAGMRRYVDLLPLGNAAAAEQRDLFAGQAERLAEDIERLKSRLAYLRGKTRMWDARLRGDAVAEHRAIEAVTLILEQFEP
>NZ_CP045643.1|WP_153286808.1|798555_799626_-|NAD-dependent-epimerase/dehydratase-family-protein
MAAETPVPGASGAGTVLVTGATGYVGGHLVARLLSEGHRTRVTVREPGRDTEVLALVRQAGADREDLLEFAVADLSADTGWAAAVDGVSHVLHVASPFPVTPPENEDELILPARDGALRVISAARTAGVRRVVMTSSFAAVGYTVKPDARYSEEDWTDPDTEGLPAYHKSKVLAERAAWDFVEANGGIELAVVNPVGIFGPVLGPRLAASTNIVRSMLTGRMPVVPLMYFGVVDVRDVVDLHLRAMLHPKAAGERFLAVGGPSISFLGMAEVLRAHLPAAADALPSSELTVEEMREAAKTEPALRDAAGLGGRVPVISNAKARSVLDWEPRDVTRTVLDTADSLIGLGLVTPVGKP
>NZ_CP045643.1|WP_153286807.1|797573_798491_+|helix-turn-helix-domain-containing-protein
MDPLEDVLTLLDTRGHLSTRLVAGGRWAVRFDAPSGVKFNAVRRGHCLLEVDGTGDPLALAEGDCYLLTQPRPFTLRGDLETEAVDAALVFASPEGGVARAGDGEDDVALVGGRFSFGDRARALLLENLPPVIHVPAGTAQAETLRWALAQIDRELRDGPMGSALVAEHLAVVMLVHVLRLHLAREPGAVSGWLAGLGDPVVAAALTSLHGRPEHPWTVAELAVACAVSRSTLAARFKSTVGRGPLDYLTRWRVELASRHLRRGTDTVSVIARTVGYGSESALSTAFKRVTGVSPRDYRRTTRAS
>NZ_CP045643.1|WP_153286806.1|796485_797460_-|SDR-family-NAD(P)-dependent-oxidoreductase
MYDDHDRLTTPFHSHATAAEVIHGVDLTGRRAIVTGGASGIGVETVRALAAAGAEVTIATRAPASAAGLVHELTAAHGSGSVHAAPLDLADLLSVDAFARTWRGPLDILVANAGIMALPERTVSAQGWELQLATNHLGHFALATALHGSLRAAGSARVVIVSSGAHLTAGFDFDDPQFERRPYDRWTAYGQSKTADVLLAVGARRWAADGITANALNPGWISTNLQRYLDDDTMRALGAIDEKGDIIPQPYYKEPAQGASTSVLLAASPLVSGVTGRYFEDNEEARLVRGPEERPGGVATHALDPEAADRLWDHATAVVGAALR
>NZ_CP045643.1|WP_153286805.1|795537_796440_+|radical-SAM-protein
MDLTDLTVLYRGPLASCDYDCPYCPFAKRRDSTAQLRADRAALERFVAWARGPHGHRLSVLFTPWGEGLTRSWYRRALVELSHEPHIGRVAVQTNLSCRTDWLARAEADTVALWCTYHPGQTPYERFLGRTHRLSDLGIRFSVGVVGLPGHLDHARRLRADLPSHVYLWINAAEGHTYTDEQAAEWTALDPLFPYSRHPHRSAGLPCRTGRSVISVDGEGTVRRCHFVRTELGNLYDGSYRSALAPRPCPLTACDCHIGYVHLETLPLYDVFAGGVLERVPHAGALPHRPLLPLLPTATG
>NZ_CP045643.1|WP_153286804.1|794173_795529_+|coproporphyrinogen-III-oxidase-family-protein
MTVAPVAAAHTVPRPYQSYLYAYPHKTAYRPLEPRPALEQLWAGESRQALSLYLHIPFCEVRCGFCNLFTRVGAPDGLTGRYLDALSRQAVAVREALGDEPPPRFANAAFGGGTPTFLEAAELERLCDIAERDMGADLRSVPLSVEASPATASADRLAVLVRRGATRLSLGVQSFVEEEARAAVRPQRRADVEAALTRIRESAVPVLNIDLIYGIDGQTTASWRYSLDAALAWRPEEIYLYPLYIRPLTGLGRHADARIADRDWDEQRLRLYREGRDHLLSEGYEQVSMRMFRRADAPSQGPDDYACQTDGMIGLGCGARSYTSALHYSFDYAVSMREVRAIIDDYSATEDFSRALHGRWVDEDEARRRHLLQSLLQAEGLESGDYLRRFGTTPADDFAAELDVLARRGWLQDAGTERFRLSPEGLAHSDAIGPEFFSPAVRDAMTAYESK
>NZ_CP045643.1|WP_153286813.1|806237_806948_+|DUF1275-domain-containing-protein
MALRASASGGRGWPGHARTAQFLLTLASGAVNAVSFLALGGVFTSVMTANSALLGLALGNGHLSLANLAGLAIAAYLVGAAAGSWITATSGPAPLTGVAGALLAESALLWALFAAWLFLDGAPGTTARGALLAVGATAMGCQSGSVRVVAGSSVTTAYITGALTGLVAQATVERKLQRHNALVILLLPVGAAVGGAAVRWARLLAPAIPAVLVTAALLVTVARRRSARGDGPPADA
>NZ_CP045643.1|WP_153286814.1|807085_809434_+|FdhF/YdeP-family-oxidoreductase
MTASDVNESAPAEHEEPPRTPDGGMGPSTDKKPSQVHYHHPAAGWGAAKSVTHVLVKERALVDGPRAIFRMNHENTGFDCPGCAWPDDTKGLKLDICENGIKHVTWEMTPKRVGADFFAAHTVSELSTWTDFALEDQGRLTQPLVYDAATDRYVPIDWQEAFDLIGGELRALESPNQAAFYTSGRLGNEATFLYQLMAREFGTNNLPDCSNMCHEASGRALQAALGTGKGTADLKDWETADALFIMGVNAASNAPRMLTALAEAYRRGAQIVHINPLVEAAATRTIVPHDITDMALFKSTRTSTLNLQVRAGGDMALLRGIAKAVLEESEHDPKALDREFIDRHTHGFDAYRAVCEATSWEELELQSGLTRAEILKAADIYSRSDRTLISWCLGVSQHEHGVDTIREIVNVLLLRGNLGREGAGPSPVRGHSNVQGNRTCGIDHRPTEAFLRRLDDVCGIDAPRPHGLDTVATVAGMHEGKVKVFVGMGGNFALAAPDTAYTAEGLARCALTVHVSTKLNRSHLAHGKKALILPCLGRTEKDHQRHGMQATSVEDSMSMVHLSLGMKRPASRDLLSEPAIIAGMARATLPDSSTPWEHYIEDYDRIRDTMARVLDGFEDFNRRVRLPLGFRIRQPARELVFLTPTGRAEFSAAPLPDVVPQDGTLILQTMRSHDQWNTTIYSDDDRYRGIKNLRTLVFMNRADMRARHIKDGSLVDITATAKDGTRRTLRQYHALPYDIPRSCAAGYMPEMNALISASDYSLQSDQPLMKSLKVTISPSRTD
>NZ_CP045643.1|WP_153286815.1|809489_809981_-|hypothetical-protein
MTSLTRGLMYGAAAGAAGTTVLDTVSYCDMALRGRPASSTPEVTVRRLSQELHVPIPGEGEKQDNRVAGLGPLTGYAAGLGMGVLLGVARAAGWRPASATHYAVAAAGALVATNGPMTVLRVTDPRTWSAVDWASDIVPHLAYAVVTVGVLERMMPTAGRRRG
>NZ_CP045643.1|WP_153286816.1|810263_811388_+|hypothetical-protein
MEFTRSGRLRASGRRRTGWGLAAEAGAVVWAVLANGRDRDPAYFLMALAALGVLTGIRELRRAARPFSLRVDEQGITLVDGGLGWGQIEGVALHYRAAVNVDSDDGPTAPPPPRLHVFPTEDAELPGLRASVTGGRRFYDVADAAELDQGLDQLIEALTRYAGPRLEAAPHGLRRAVAPGPVTLQGPGFGPLTDAAASPRAAENPAVATRTFTARRHTGARLLLALALAVAGTAATVPLFTGHLPWGPEPAAALAPLGAMLGWCLSVLSYRSWVRPLRLRIGPDGLAVQSADVPEVAIGWDQVVAVAVARRPGATEKHLWLLLWPVPGHGFDLPHELTDGHRAYPLVELRRLRDGDEVERTARYFAGSRYAEPA
>NZ_CP045643.1|WP_153286817.1|812297_814847_+|sialidase
MRLRSLGIALAAAAALIALPAHSPAAAAETPLSQGRTASSSSDENAGTPAANAVDGNIGTRWSSAASDAQWLQVDLGTAANLSKVVLNWETAYGKDYKIQVSDNGSSWTDIKSVTGGDGGTDTLDVAGHGRYVRMSGVTRATQYGYSLWEFQVFGTSDTGTPPTGNCNTANAAKGRPATASSTENAGTPASGAFDDNTGTRWSSQASDPQWVQVDLGSVQDICKVDLNWEAAYGKEFTIQSSANGQDWTTLKSVTNGTGGTASYDVSGSGRYLRVNGTVRGTAYGYSLWEVAVHTGSTGTPPVEGGGDLGPNVIVVDPSTPNLQAKFDQVFAQQETSQFGSGRYQFLLKPGTYNGINAQLGFYTSISGLGLNPDDTQINGDITVDAGWFNGNATQNFWRSAENLAIRPVNGTDRWAVAQAAPFRRIHVQGGLNLAPNGYGWASGGYIADSKIDGTVGPYSQQQWYTRDSSVGGWTNGVWNMTFSGVQGAPATNFDSGPYTTLDNTPVSREKPFLYLDGNTYKVFVPGKRTNARGVSWPANAGGTSLPLDQFYVVKPGATAATINTALAQGLNLLFTPGVYHLDQTINVTRANTVVLGLGLATIVPDNGVDAMHVADVDGVRLAGFLIDAGSTKSDTLLQIGPAGSSADHAANPTTMQDVFVRIGGAGPGLATNSVVVNSDDAIVDHTWIWRADHGAGVGWETNRADYGLVVNGDDVLTTGLFVEHFNKYDVLWNGERGRTIFFQNEKAYDVPNAAAITHDGIVGYAAYKVADSVNVHEAWGLGSYCNFTSDPTIVQQHGFQVPVKTGIKMHDILVISLGGKGQYAHVINNTGAPTSGTDTVPSKITQFP
>NZ_CP045643.1|WP_153286818.1|814989_815670_-|response-regulator
MTIRVLLADDQTLIRAGFRVLVDRAPDLEVVGEATNGREAVELAAATRADVILMDIRMPELDGIEATRLITEDENLAGVRVLILTTFELDENVLRALRAGASGFLSKSVEPADLQEAIRVVAGGEALLSPKATRGLIARFLDEPTPGPLPSPVRLDGLTERERETMALVAAGLSNDEIGERLYVSPLTAKTHVNRAMMKLGARDRAQLVVFAYQSGLVRAGDLPVR
>NZ_CP045643.1|WP_153286819.1|815666_816881_-|two-component-sensor-histidine-kinase
MADDLLSRMRARAASHPQGVDAVFGLVVVCATLFAVRFGPSGRALGAEDLVAASLACALIATRRRWPLPVFWVVTVVSAAFNLHAALVAPLLATSVICTYTVASRTTRRVAVVTGAITILTVYAAVVIGAGRSWTDPQNAAIVAWGGLAVAVGGAVRSRQADLAAVEERARQAEHNRDEEARRRVVEERLRIARDLHDVVAHHIAVINVQVGVATALLREEPDVAEEALAHVRQAARTVLADLSTVLDVLRSGEPGHATEPPPGLSRLASMLDALGAAGLRVEHRQEGEARPLPSAVDLAAYRIVQESLTNAHKHGSEPAARLRIDYTPAGLAIVVDNAAAHRRPDAHGTGHGLIGLRERAGSVGGTVRTGRDDGGRFTVSAFLPVTPDLADLADRPDRQETRT
>NZ_CP045643.1|WP_153292701.1|817108_818641_+|multicopper-oxidase-domain-containing-protein
MLGTLAGCTSPGSESGAAAGGGEFGGRTLTSAAELPERFSTPLPIPPVKRPARTTADTDYYDITAREARVEILPGLRTAIMGYDGIFPGPTIATRRGRRTVLRYRNQLDVPTVVHLHGGHTPPESDGFPTDLVLPATGGARFAEQAVGGRTSTGTRDYTYPLDQRAATLWYHDHRMGFTGPQVWRGLAGFLLVTDDEEAALPLPRAERDIPLMIADRAFDADGSLRYPSMDPRLISMAGVDADHMAGAAGDVVLVNGAPWPELEVDAARYRFRILNASNARRYELALDPAPHGGGPFTQIGSDQGLLAAPLRHTTLPIAPAERFDVVVDFSGWPVGTRVTLTNRAGGGGTGQIMRFVVARRATDDSRIPARLSSIEPLPTASATRRPWMFRKGRVTSMGTDAAGWVINGREFDPRRVDAAPRLGEVEVWRLATDAYHPVHIHLSPFQVLSRDGGPPGPADHGWKDTIDLRPKQYADVAVRFDDYAGRYLLHCHNLEHEDMAMMATFRTGR
>NZ_CP045643.1|WP_153286820.1|818650_820885_+|MMPL-family-transporter
MQTFALFLLRRRRWVIGFWLVVLLAGGTAAGRLPDRLSSDFSLPGQEGSETQAELARTYGVSADLGCLPVLTAPAGRTIARADVTAVADRIRAMGGVQVLDYGGTGDPDFLTEDGHSTFLLVYGPQPAGFDDPLADPVDRTVRAAARERGLTAAVTGYNQLAAGSDTGGDKGLSVLGETLVGALGALLVLVFVFASFLALVPLLIAGVSILATFLVVLGLTTFTDVSFVVQFLIALVGLGVAIDYSLLVVSRWREERARGRSNDEAVVTAVTTAGRAVLASGITVAISLVALVVVDVPLIRSMGFGGMVIPVISTLVVLTLLPVLLSVAGPRVDRPRLRTEGHTSRAWSAWARGVVRYRWAAAGVACAALALAIVPVFGLQIGQSGSDSLARDGVAHDTLAALRTGGVGDGVLTPMPLLVRSGADATAVATAAGRVDGVRMAVVAPAARGGVTEVVVVPEHETVDNTSVAVVSAVRNATRGLPGYIGVAGRGAVVLDYQRAVFDNFPYVLGLIALVTFVLLVRTFRSLLLPLKAVLLNLVSVAAVFGSVTWFWQDGHGSGALFGIAATGALTFWLPVLIFAFLFGLSMDYEVFILARMREEYDRTGSTSYAVEHGLGRTGRLVTSAALILFFAFAALAAAPGTDIKVLATALGAGILLDATVVRALLVPAMVSLFGKYNWWLPAGIARLLRVEASPLTPDTVVPAGHDAGSHPQVDDSAVADTGADALTGDDRGEVRDGSAPVR
>NZ_CP045643.1|WP_153286821.1|821126_821318_-|hypothetical-protein
MSAQRLGTLLVPVPGLSGTTYPPGTTVTVRGRGATVDAFINGDWLPLSWWEFSDGLREDIADR

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Crispr_ID: NZ_CP045643_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_2

1251901-1251963

Orphan

Consensus_repeat	Method
GGGGGCACGGTGGCGGGGCACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_2

>merge|NZ_CP045643|2|1251901-1251963|CRISPRCasFinder
GGGATCACGGTGAGGGGGCACGGTGGCGGGGCACGGCGGCCGGGAGGCGGTGGCGGGACGCGG

>NZ_CP045643|2|2|1251901-1251963|CRISPRCasFinder
GGGATCACGGTGAGGGGGCACGG	TGGCGGGGCACGGCGGC
CGGGAGGCGGTGGCGGGACGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153287147.1\|1255811_1256222_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|214939
NZ_CP045643.1\|WP_153287142.1\|1248675_1250169_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP045643.1\|WP_153287152.1\|1261378_1263730_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|227311
NZ_CP045643.1\|WP_153287143.1\|1250211_1251840_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238625
NZ_CP045643.1\|WP_153287146.1\|1255440_1255815_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP045643.1\|WP_153287151.1\|1260251_1260806_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP045643.1\|WP_153287136.1\|1244596_1245040_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995
NZ_CP045643.1\|WP_153287135.1\|1243916_1244432_-\|ketosteroid-isomerase	unknown	unknown	gnl\|CDD\|226158
NZ_CP045643.1\|WP_153287141.1\|1247838_1248558_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP045643.1\|WP_153287148.1\|1256227_1257940_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340391
NZ_CP045643.1\|WP_153287144.1\|1252152_1253184_+\|terpene-cyclase	unknown	unknown	gnl\|CDD\|173835
NZ_CP045643.1\|WP_153287139.1\|1246780_1247173_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|380093
NZ_CP045643.1\|WP_153287149.1\|1258146_1259739_-\|oxidoreductase	unknown	unknown	unknown
NZ_CP045643.1\|WP_153287150.1\|1259892_1260255_+\|DUF1304-family-protein	unknown	unknown	gnl\|CDD\|377753
NZ_CP045643.1\|WP_153287153.1\|1264250_1264649_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153287145.1\|1254854_1255460_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP045643.1\|WP_153287138.1\|1246418_1246745_+\|DUF4235-domain-containing-protein	unknown	unknown	gnl\|CDD\|379422
NZ_CP045643.1\|WP_153287134.1\|1243131_1243764_+\|lysine-transporter-LysE	unknown	unknown	gnl\|CDD\|224199
NZ_CP045643.1\|WP_153287137.1\|1245238_1246420_-\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|273544
NZ_CP045643.1\|WP_153287140.1\|1247253_1247715_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|132706

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153287147.1\|1255811_1256222_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|214939	smart00960, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	2.44526e-14
NZ_CP045643.1\|WP_153287142.1\|1248675_1250169_+\|amino-acid-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.21425e-28
NZ_CP045643.1\|WP_153287152.1\|1261378_1263730_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.03098e-82
NZ_CP045643.1\|WP_153287143.1\|1250211_1251840_+\|amidohydrolase-family-protein	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	8.54996e-150
NZ_CP045643.1\|WP_153287146.1\|1255440_1255815_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	2.52694e-25
NZ_CP045643.1\|WP_153287151.1\|1260251_1260806_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.21345e-07
NZ_CP045643.1\|WP_153287136.1\|1244596_1245040_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	1.50383e-56
NZ_CP045643.1\|WP_153287135.1\|1243916_1244432_-\|ketosteroid-isomerase	gnl\|CDD\|226158	COG3631, COG3631, Ketosteroid isomerase-related protein [General function prediction only].	7.57593e-09
NZ_CP045643.1\|WP_153287141.1\|1247838_1248558_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	4.30409e-08
NZ_CP045643.1\|WP_153287148.1\|1256227_1257940_-\|ATP-binding-protein	gnl\|CDD\|340391	cd00075, HATPase, Histidine kinase-like ATPase domain. This superfamily includes the histidine kinase-like ATPase (HATPase) domains of several ATP-binding proteins such as histidine kinase, DNA gyrase B, topoisomerases, heat shock protein 90 (HSP90), phytochrome-like ATPases and DNA mismatch repair proteins. Domains belonging to this superfamily are also referred to as GHKL (gyrase, heat-shock protein 90, histidine kinase, MutL) ATPase domains.	1.06059e-13
NZ_CP045643.1\|WP_153287144.1\|1252152_1253184_+\|terpene-cyclase	gnl\|CDD\|173835	cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in fungi, bacteria and Dictyostelium.	1.06284e-41
NZ_CP045643.1\|WP_153287139.1\|1246780_1247173_-\|VOC-family-protein	gnl\|CDD\|380093	pfam18029, Glyoxalase_6, Glyoxalase-like domain. This entry comprises a diverse set of domains related to the Glyoxalase domain. The exact specificity of these proteins is uncertain.	6.45357e-18
NZ_CP045643.1\|WP_153287150.1\|1259892_1260255_+\|DUF1304-family-protein	gnl\|CDD\|377753	pfam06993, DUF1304, Protein of unknown function (DUF1304). This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.	1.12596e-39
NZ_CP045643.1\|WP_153287145.1\|1254854_1255460_-\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	1.25398e-42
NZ_CP045643.1\|WP_153287138.1\|1246418_1246745_+\|DUF4235-domain-containing-protein	gnl\|CDD\|379422	pfam14019, DUF4235, Protein of unknown function (DUF4235). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 88 and 119 amino acids in length.	3.04175e-20
NZ_CP045643.1\|WP_153287134.1\|1243131_1243764_+\|lysine-transporter-LysE	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	7.97648e-08
NZ_CP045643.1\|WP_153287137.1\|1245238_1246420_-\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|273544	TIGR01297, Zinc_transporter, cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence. [Transport and binding proteins, Cations and iron carrying compounds].	1.19046e-62
NZ_CP045643.1\|WP_153287140.1\|1247253_1247715_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|132706	TIGR03667, Rv3369, PPOX class probable F420-dependent enzyme, Rv3369 family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN. [Unknown function, Enzymes of unknown specificity].	1.52492e-05

>NZ_CP045643.1|WP_153287143.1|1250211_1251840_+|amidohydrolase-family-protein
MHADLLFTGGPVLTPEGPTVTPVAVTGDRITAVGAAARDLTGPRTEAVDLAGRLLLPGFQDAHLHPVPAGLELARCDLTGARTAEETVRAVRAYADAHPDREWITGGGWSMEAFEGGTPTKEVLDAVVPDRPVYLPNRDHHGAWANSRALELAGVTRDTPDPADGRFERDVSGEPTGMLQEGAMRYVGRLAPPATPADRLAALLRAQRHLHALGVTAWQDALVGSFVGMEDPSDAYLAAAREGSLTARVVGALWWDRERGAEQIPELVARRAALSHGRFRATSVKLMLDGVAENGSAALLDPYLDTCGCVTANRGTRFIDPARLPAYVAELDALGFQCHFHALGDRAVRDALDAVEAARKANGPSDTRPHLAHLQVVHPDDVPRFARVGATANIQPLWAAHEPQMDELTIPFLGAERAARQYPFGSLLRSGARLAAGSDWPVSSPDPLQGIHVAVNRVAPDGTGPVFLPAERLGLTAAFTAYTAGSAYANHLDDTGSVRVGALADLVVLDRDPYAGAPEEIGATGVALTYVGGERVHEAPGA
>NZ_CP045643.1|WP_153287142.1|1248675_1250169_+|amino-acid-permease
MTQKPYGADPPSLRKSLGVVDGVAIAASSTAATTSIGIGLGVTAGVVGLHLPAIMLLAFLPVLGIAGAYTRLNRVEPNAGNGYVWVGRSLTPWLGFLVGWVNIVATVAFLAYTTAVTGSAVIQLAGEAGVHEVAGFALDPGSTAQTTAVGVVVLVAVTLTAVTGVRTAARLQSGLLVFEYVVLLGFCGYGIVTGPHAFRLSWFDPFQIPSATAVAQGMLLSVFCYWGFEAAFTVNEEVRDPKDASRAGTITLLTMLGLFLLGSVAFQRVLSEDELVGHGAQGLAFFGDRLASMPLAALPLVALMFSAVASLQAGVIPTARGMFAMSRDRTLGPVWSKVSSRYGTPAAGTLLIGALAAAVAALALVIPRLADMIMATVNAVGIVVALSYALTALAAAARFRGLLREDWRTGTRAVVLPSLSAAALLGLGGYLAWSFYTSTDHLEVSADNGWFLLLVPTLMIVSGFVAAAWAKWVRRSPYFRTGRVTDADSAPVPAALR
>NZ_CP045643.1|WP_153287141.1|1247838_1248558_-|TetR-family-transcriptional-regulator
MAERVVPPAARRRRRPTKTGVVLSEELIVETALRLLKEHGADALTVRRLGLALGADPTALYRYFRDTDDLLLAIADELIGRTLRTWRPTGDWRADLRDLGLRMHSGSLAHPQAAVLSTYRVTGRVHEIAAVETILGVLRGAGFPDAEAVRIYHAFVDQSLAFAALDAASVALPRAAREAEAGVWRATYARLSPDTHPHIAATARHLVADMRRSAYPEALDLLLTAAAARLDEIRRPPRT
>NZ_CP045643.1|WP_153287140.1|1247253_1247715_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MTPPARTLKQRTQDTLHRLEHDVDVWVSTADLEGAAPYLIPLSYLWDGTTVLLATPGASPTGRNLRATGTVRLAFGPTRDVVVVDGVAETLEPAGLPAGVGDAFAERTGFDPRRLTTAYLYFRVTPRRVQAWREADEIAGRDLMRDGEWLVDD
>NZ_CP045643.1|WP_153287139.1|1246780_1247173_-|VOC-family-protein
MALVMAGVVVLDCAEPEKLAAFYRELLDGEETDTSANRIDIRGADGTRMGFRRDLTATPPSWPRPENSLQAHLDFQVTDLDEAERRIIGLGGRPIETKDAAGPFEERGYADPAGHSFTLCRTPTMAPKLG
>NZ_CP045643.1|WP_153287138.1|1246418_1246745_+|DUF4235-domain-containing-protein
MPKKRKKLKLPLAYKPLGFALGWASGALAGLAFEAAWKAVRHEEDAPDALDKDRGWGEVLLAAALQGALFAVARSAADRTGAKAVERSTGVWPSPGKGKSKGIRGGGS
>NZ_CP045643.1|WP_153287137.1|1245238_1246420_-|cation-diffusion-facilitator-family-transporter
MWVSSCGPRRRCHRIRTSGRGRHGPPKCEPRGPGQPDGVNRTSQDRSDRPKPSAQSTEPREPARSEPSPKPKGQDHGTRLTVLVALGANLLIAVAKAVGGLFTGSPALLSEAAHSVADSLNEVFLLAALRRSRRPADSRHPFGYGKERFFWSLLAAVGIFVMGGCFSFFQGFEALKNGGEESSSGYVAGLAVLVVALLAEGASLFRALHQVRGQGGAGRLRDPALRTVVAEDGTAVLGVTFAITGMALHMITGQIVWEASASFAIGALLVGVAFWLGRDAREQLIGRAADPESSGRIRALLEAQPEIDSVEALLTMEIGLDSTLVAARIDLVPGLDSEEVEEVAVRIKRSVAHTVPEADQIFLDVTDAAAARSASRGDGYAEGPDARGERGGA
>NZ_CP045643.1|WP_153287136.1|1244596_1245040_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MPLEGEYEPSPTQWVREQVELYESSGGTEGTTLQDTGLPVIILTTRGAKSGKIRKTPLMRVEHDGRYAAVASLGGAPKHPVWYYNVKSDPHVELQDGARRRDLRAREVTGAEKDQWWERAVAAYPSYADYQKKTDREIPLFVLEPTD
>NZ_CP045643.1|WP_153287135.1|1243916_1244432_-|ketosteroid-isomerase
MPAVTTHVPTTRAVTEELLRRIGSGLPERIAELYAERIDWQLDWPRDEHGRAATPWIRPRSTRADAADHFRELGAHHLPGAADTTVERILVDGAEAVVLGEIRQTARVTGRPYRARFALHLTVEDGLVVRHHVYEDSLAVARAFAPRADARPGAPGGPGAPGGPAAPRRDR
>NZ_CP045643.1|WP_153287134.1|1243131_1243764_+|lysine-transporter-LysE
MTAALVAGLLAGYGIAIPVGAVATYLVSLTARTSLRIGGSAALGIATADGVYALVAALGGAALAAALQPVLVPLRVASGLVLAALAVRGAVTALRQYRERRLTARSTKDPAHPARAYLTLLGITLLNPTTIVYFAALVLGSRTSEAVRPLEQGVFVLAAFVASASWQLLIAGGGALLGRVLTGHRGRLVTALASSTVIMVLAVRMLAASP
>NZ_CP045643.1|WP_153287144.1|1252152_1253184_+|terpene-cyclase
MPQDVRFDLPFRTPVSAHLESAREHHLRWVWERGLVRSRAGFEEYRSWDLPEAAARTYPHASADDLVVLMNWFSLAFLFDDQFDTASPDRADRIAEVARELIATPLRPAGTAPRVVCPITVAWAEVWTHLSHGMSLAWRTRFAASWGRFLVAHTEEVDLAARGLAGTLGLAEYAEFRRRTVGIHHSIDAGERSRGFEVPPQVQAHELMVRMRDLAADTIGFMNDIHSFERERRRGDGHNLIAVLHRQRGSTWEEATAEAYRMTRDRLDEYLALEARVPRMCEELGLDAEQRVRVRMGVEAIQHWISGNYEWALTSGRYAAAKDGPAVTAELAGKGSLDDLLVV
>NZ_CP045643.1|WP_153287145.1|1254854_1255460_-|ATP-binding-protein
MDSKGFDRPGRGPDRGPRSVKVMIAGGFGTGKTTLVASVSDIKPLTTEESLTEAGAGLDDLIGVTGKTRTTVSMDFGKISLNDELVLYLFGTPGQERFWFLWNGLFKGALGAVVLVDTRRLASSFRAIEEMERQDVPFVIALNVFPDSPRHPVEEIRDALDLPAHTPIVACDARDRISSRDVLIALVRHLQERSAAARETR
>NZ_CP045643.1|WP_153287146.1|1255440_1255815_-|DUF742-domain-containing-protein
MSAPRRPTDPSGLERYYVLTGGRSGPGGGPAAGLDVATLIVSRGVPDPGMQHEHEEILRRCREPLSVAELGAHLRLPFNILAVLLADLLDADRVEARHPLPAPDTGRGPGRALLEEVLRGLQRL
>NZ_CP045643.1|WP_153287147.1|1255811_1256222_-|roadblock/LC7-domain-containing-protein
MTQQGTDVSWALRDLTESIKEIRFALVASSDGKAITSYGADDPDDVDRFAAVVAGLQALAQPVAEQFPRYAGGLRLAMIEVDGGHLFVVRAGVETYLGVLAREGLDQGLLGHQMRDLARRMGELLGTEPRLEEHSG
>NZ_CP045643.1|WP_153287148.1|1256227_1257940_-|ATP-binding-protein
MELATSPPAARAPVAWYSWWLMPVALGAGTVATAVAGPDQVQIPAAFAGTAATAAGAICVRLLLRTRSQLLRTAHDIGGARDEQAQQWQQHVAGLERKFAAERAVLDAQLAGQADTFEARLAEQKGTFEARLAEQALTHDARVAEQAEAHETGIAARTQVWQERLAVQLAVVGRLGDTYLPGALERLRAGEAIDDILPEVARETDASPELRAELRKILRTALIGVETEFDRSTSAEQAVISIGSRMHVLTGKLRGRLHEMQGEHGRLPAVARSLMELDQEIGPADRLAASIGVLGGSDRPGRQWQEPQRLLSVVRGGIGRIKDFDRVQVRHLPELGVDGALVDHLTLIFAHLLDNAARYSPPTEAVVVSGREVPNGVGVEIQDAGKGLSEEKKREAARTLAGTEAGAGLGGISEDANLGLRVVGTLARRYGIRVTFADSPWLGTSVVVVVPHKYFSPLPATVTDPAPPAAIPGAAGPDTTPGGLPRRRGRRTGASEPRPDGAPGPDGAPRTDAAPRPDAAPRTEESVAVVPPDASFAGLAAFAAAGRESAPAHGTAAGRESDEHRTEESD
>NZ_CP045643.1|WP_153287149.1|1258146_1259739_-|oxidoreductase
MSGSLAPGGWSGSERGMWAAFRRGEWYADGGEVRATVVRRLLLAPPPAEPGHLPRLRLRDVRISGRLDLAEAVVAGTLRLRNCRFEQVPCLDGAALGALELRDCRLPGLSGVGVTIGGKCEITGCRVEGPTDLYGASIGGTLHLEHSRLTGHGERRGERALQLLCATIGGDIQAGAGFHVNGCTDLRDTSVRGSVVLTGARLRNPTGTALKANRLHIGGNLSCRGGLVAEGTVDLCDARVGGGALFEDASLSAEHGPALRAHGIDVGAEFNLCDGFTALGRLSMSSITVRSRFCFKDGLIDTPAGQPALISRRSTASELDLRFREPVKGVVSLSHTRVTVLNATPEAWPGALRMDGMVYDSLLPELPARQRLPLLARDPEGFTPQPYEQLAATYRQHGHDRDARTVLLTQQRRLRGTLPWPGQVWSGFQDLTVGYGYRPMRAVWWLCAIMLSGIALFTRWPPQAVDPGKPPHFQAAIYTFDLVLPLVDFGQEQAFSPRGGLQWAAVVLVCLGWLLATTAAAGANRVLRRT
>NZ_CP045643.1|WP_153287150.1|1259892_1260255_+|DUF1304-family-protein
MQTVANVLVGLVAALHVYILVMEMFLWEKKPGRGLHGFDTEMARATAPMAANQGLYNGFLAAGLVWGLFADDPTGFRVRVFFLVCVVVAGVYGAVTANRRILFAQALPGALALAAVLAAR
>NZ_CP045643.1|WP_153287151.1|1260251_1260806_+|TetR-family-transcriptional-regulator
MTREDPRAARTRERLRRALLAECAERPLEEVGVAALVRRAGVGRATFYVHYADLEALAVDACADVVREAVDALHAWRGRPDPVSAPPALLSFFTGLAPHTGLYRALLSPGGGGPLGHVLHRDLRARSLTERTLAGAPDAALVASAVAATFAGVLADWLHGLLEGTPEEVAHQVWQLLVTLHMSR
>NZ_CP045643.1|WP_153287152.1|1261378_1263730_+|SpoIIE-family-protein-phosphatase
MITSPTLPDPAMTSRSNAGPGAGRTGVRHTSPRSRLRPAAVLLVLVGAIVLEGDFVPPMGWATLLAGVSAAAATSAGPALTAGVVLVSGAARIGLGLGCPRLPFATASHSVAMLVICAVVIVFCTLRQRHRVEMDTLRAVSEIAQGVVLRPLPGRLGPLRVAVTYQASDAHATVGSDLYGAARVPGATRILIGDVRGKGLQGIHEVAAALGAFREAARCYPTLPEVAAHLEASMRSHLEEVHESDHEAGERFVTALLLEIPDDQRVVHAVSCGHPAPLLSREGRVTLLKPRRCSPPLGLGSLSARDHHQDTFPFTAEDVLMLYTDGITEARDGAGIFYPLKERVASWTGTDPEQLLRYVQGDLSQHISGPLGDDAAMIALRRTPGPTPSRVREPGTPRTPASARAGRRADPTPRSPQAVRPPAGTGAQTHGGTGQTVPPGPSRDRSTGTGTAGSAARHRILVLMFDGVQSLDVTGPLDVYAAANEYGGDYRLTTASLDGQPVRTTAGLRLVPDMALDDVDAGVDTLVVPGGPRWWEAVADPPLVEGITRLAGTSGATTVAAVCAGTFPLAETGLLDGRRAATHWKLAADLAARYPRVRVDSEAIFVRDGRFITSAGITAGIDLTLSLVESDLGPDVARAAAKQLVVFMARPGGQSQFSVRQQSRRPQNAPLRDVLDRVAADPRGDHSLQALADRAALSSRHLTRLFRSEVGTTAGEYVKRIRLEAAQALLEGGDEPLDTVARRSGFRTEETMRRAFRGQFGVSPGTYRDRFRSTSPAAAPSTR
>NZ_CP045643.1|WP_153287153.1|1264250_1264649_-|hypothetical-protein
MLLETDTRICRGAYVTVSSSPENPPDSDGSRSDAGNSVNDLGAEVWTPPPPLEMWLVGLETRTTEGPPVWRYYVVDHALDPGQASHTALQRADSAAEKATWGRPGGVGRIGRVEVRRILQDVLGNVTLARRS

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Crispr_ID: NZ_CP045643_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_3

2080557-2080658

Orphan

Consensus_repeat	Method
CCGGTCTGAGCGACGGCCCGGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_3

>merge|NZ_CP045643|3|2080557-2080658|CRISPRCasFinder
CCGGTCTGAGCGACGGCCCGGGCCATGTCCGTCCGGGTCACGTCCTCCCCGGGCCATCTCCGTCCGGGCCGTGTCCGTCCGGTCTGAGCGACGGTCCGGGCC

>NZ_CP045643|3|3|2080557-2080658|CRISPRCasFinder
CCGGTCTGAGCGACGGCCCGGGCC	ATGTCCGTCCGGGTCACGTCCTCCCCGGGCCATCTCCGTCCGGGCCGTGTCCGT
CCGGTCTGAGCGACGGTCCGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153287736.1\|2069080_2069860_+\|cell-envelope-biogenesis-protein-OmpA	unknown	unknown	gnl\|CDD\|223512
NZ_CP045643.1\|WP_153287738.1\|2070616_2071144_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP045643.1\|WP_153287748.1\|2092126_2093239_-\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|336785
NZ_CP045643.1\|WP_153292801.1\|2086692_2088222_+\|LytR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367673
NZ_CP045643.1\|WP_153292800.1\|2084986_2086186_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340836
NZ_CP045643.1\|WP_153287740.1\|2073857_2074877_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380207
NZ_CP045643.1\|WP_153287746.1\|2088399_2089164_+\|DUF2071-domain-containing-protein	unknown	unknown	gnl\|CDD\|378271
NZ_CP045643.1\|WP_153287737.1\|2069971_2070487_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP045643.1\|WP_153292796.1\|2072415_2073705_+\|DUF3533-domain-containing-protein	unknown	unknown	gnl\|CDD\|371867
NZ_CP045643.1\|WP_153292799.1\|2083456_2083840_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP045643.1\|WP_153287739.1\|2071243_2072038_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|371689
NZ_CP045643.1\|WP_153292797.1\|2078331_2079189_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP045643.1\|WP_153287742.1\|2076179_2077364_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|224717
NZ_CP045643.1\|WP_153287747.1\|2089322_2092130_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292798.1\|2081683_2083159_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340868
NZ_CP045643.1\|WP_153287741.1\|2075054_2075948_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP045643.1\|WP_153287743.1\|2077581_2078154_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP045643.1\|WP_153287745.1\|2080762_2081464_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181335
NZ_CP045643.1\|WP_153287749.1\|2093288_2094902_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|283431
NZ_CP045643.1\|WP_153287750.1\|2094898_2096317_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153287736.1\|2069080_2069860_+\|cell-envelope-biogenesis-protein-OmpA	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	2.55159e-18
NZ_CP045643.1\|WP_153287738.1\|2070616_2071144_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.38343e-11
NZ_CP045643.1\|WP_153287748.1\|2092126_2093239_-\|AAA-domain-containing-protein	gnl\|CDD\|336785	pfam07728, AAA_5, AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	1.18223e-42
NZ_CP045643.1\|WP_153292801.1\|2086692_2088222_+\|LytR-family-transcriptional-regulator	gnl\|CDD\|367673	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain.	3.76959e-45
NZ_CP045643.1\|WP_153292800.1\|2084986_2086186_+\|glycosyltransferase	gnl\|CDD\|340836	cd03807, GT4_WbnK-like, Shigella dysenteriae WbnK and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.	7.58503e-40
NZ_CP045643.1\|WP_153287740.1\|2073857_2074877_-\|hypothetical-protein	gnl\|CDD\|380207	NF033206, ScyE_fam, ScyD/ScyE family protein. This family includes ScyE, a protein involved in scytomenin biosynthesis and export, and its paralog ScyD. Some members of the family contain a C-terminal PEP-CTERM domain that predictions anchoring to the outer membrane.	4.7704e-08
NZ_CP045643.1\|WP_153287746.1\|2088399_2089164_+\|DUF2071-domain-containing-protein	gnl\|CDD\|378271	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071). This conserved protein (similar to YgjF), found in various prokaryotes, has no known function.	6.95531e-83
NZ_CP045643.1\|WP_153287737.1\|2069971_2070487_-\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	9.10785e-35
NZ_CP045643.1\|WP_153292796.1\|2072415_2073705_+\|DUF3533-domain-containing-protein	gnl\|CDD\|371867	pfam12051, DUF3533, Protein of unknown function (DUF3533). This family of transmembrane proteins is functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 393 to 772 amino acids in length.	6.80093e-34
NZ_CP045643.1\|WP_153292799.1\|2083456_2083840_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.00147e-20
NZ_CP045643.1\|WP_153287739.1\|2071243_2072038_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|371689	pfam11716, MDMPI_N, Mycothiol maleylpyruvate isomerase N-terminal domain.	7.88033e-07
NZ_CP045643.1\|WP_153292797.1\|2078331_2079189_+\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.4846e-44
NZ_CP045643.1\|WP_153287742.1\|2076179_2077364_+\|CoA-transferase	gnl\|CDD\|224717	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion].	3.01955e-132
NZ_CP045643.1\|WP_153292798.1\|2081683_2083159_-\|MFS-transporter	gnl\|CDD\|340868	cd06179, MFS_TRI12_like, Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters. This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.56014e-39
NZ_CP045643.1\|WP_153287741.1\|2075054_2075948_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	1.44526e-42
NZ_CP045643.1\|WP_153287743.1\|2077581_2078154_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.06808e-08
NZ_CP045643.1\|WP_153287745.1\|2080762_2081464_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|181335	PRK08264, PRK08264, SDR family oxidoreductase.	1.29411e-117
NZ_CP045643.1\|WP_153287749.1\|2093288_2094902_-\|VWA-domain-containing-protein	gnl\|CDD\|283431	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein. This family is annotated by SMART as containing a VWA (von Willebrand factor type A) domain. The exact function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon is several bacteria.	1.57707e-16

>NZ_CP045643.1|WP_153292797.1|2078331_2079189_+|AAA-family-ATPase
MFTSVDDVSARLAETGYLASPAVATTVFLADRLGKPLLVEGPAGVGKTELAKAVAEVAGARLIRLQCYEGVDESRALYEWNHAKQLLRISAGRDETWDEARTDIFSEEFLLPRPLLTAIRGDGPKVLLIDETDKADVEVEGLLLEVLSDFQVTVPELGTITATSRPFVVLTSNASRELSEALRRRCLFLHIGFPEEELERRIVRLKVPGLDEALTRSVVRVVGALREMDLRKVPSVAETIDWARTLLALGAGTLDESVVRDSLGVLLKHQDDVLKAAAKLDLDAM
>NZ_CP045643.1|WP_153287743.1|2077581_2078154_-|TetR-family-transcriptional-regulator
MATTDKASTRDRLLDAAADLFYSQGVSVGIEALCRTAGVSKRSMYQLFAGKDEVLAASLERRIPLYEEQLSPASAADATPRERVLRVFERVEYFSTRPEYRGCPFLAALVELKDPEHPASVVAGTAKDRLEEMFRAEAELGGARDAGLLARQLMLVFDGASARAGSRIETLDDGLATTTVTLLLDAAGVA
>NZ_CP045643.1|WP_153287742.1|2076179_2077364_+|CoA-transferase
MTELPLAGITVVSVEQAVAAPFATRQLADLGARVIKVERPGEGDFARRYDTTVHGESSYFVWLNRSKESLTLDLKSARGRHILEQLLAGADVFVQNLAPGAAARLGLDAASLKERHPSLIPCAITGYGSDGPWADRKAYDLLVQCQTGLVSLTGNEHGAARAGVSVADIAAGMYAYSGVLTALFTRATQGVARAVEVSLFEALAEWMSQPALYTRHGGTQPPRIGTRHATIAPYGTYPTADGKDVLLSIQNEREWVALCERFLERPDLVQDPRFATGPDRVTHRDALDAIVAERFRALDGQEVRELLDAAGIANAGVNDVEEFLAHPVLRERGRWRDVRVPGAVVPALLPPVDLAGVDPRMDAVPALGEHTEDILTALGHASADIAALRADGVV
>NZ_CP045643.1|WP_153287741.1|2075054_2075948_-|helix-turn-helix-domain-containing-protein
MDGKRQLGEFLRARRSQVRPEDLDLVTYGDRRRVPGLRREELAQLAGVSQSYYARLEQGQSNASPEVLEAIAQALRLGEAERRHLLELAAGARRRTRARRPEPERVSPALARLTAALDDVPVVVLGRRGDVLAWNRAGHALYAGHLDPEGPERPGERPNMARLVFLDEHTRDLYVDWPAKARAVVGALRLASGRFPDDPALASLVGELTLGSEEFASMWADHRVKTSEATGYGMRHPLVGAMDVTQQTLHAEDGLTVVIATTEAHSPSRAAMTLLVHSAGADRQGVRPARSPGRAPA
>NZ_CP045643.1|WP_153287740.1|2073857_2074877_-|hypothetical-protein
MRNKLAVLACAVTLAATTAVTAFTEISATAATGPAVTRPVATPRIAAHFDLARGQMPENIALEPDGTADVTFAAARQVAAVSPAGAIRVLATLPAPADGGVHTPALGFALTTGIVRAHDGTLYFLYASGTPDLTGVWRLRPGGTPHRIAALRADGLPNGLVLDERHHRLYAADSVRGEILTVPTTGGDPTTWSAAPELAATGFLGVNGLKIHRGALWATNLDGGTVLRIPFGPGGRPGPVRTTATGLTGIDDFAFTGRGDEILAALDGPGTVVRIRRDGTSSTVLTAADGLQNPTSVALRRGTLYVLSAAYTTATDPNLLLAPVPGRVTGAGNTPGDHR
>NZ_CP045643.1|WP_153292796.1|2072415_2073705_+|DUF3533-domain-containing-protein
MAADGTPAPDHAPAPAGAAALLRRPRLWLLPTVLSGLLSLLLALLYMGGILNPNGALRDLPIGIVDTDQGRPMPGQTTNLGAQLTRAIVADTSGKARWQRLTRAQLQDRLTAGKIFGALVVPADFTASVTALTTSDATARPKLTVLTNPGLGSLGSSLASRIAQQTAQQASLTVGKRLTASPAAADADSTTRLLLADPVTVTTEVGHPIGEHSGLGLTAFYYTLLLVLAGFLGANVINNGVDTALGYADTEIGPWHTRRPTVPISRTQTLLLKMGMTAGISVLTTTLVMVAAIAILGMDASHLPLLWIYSYCANVAVGLGVQAINAAFGGIGQLVSMFVFIVLGLPSSGSTVPLQAVPGFYRFLSVFEPMRQLGGGVRSILFFDARADAGLARAWLMIAVGTAVALLFGLAMTRYYDRRGLHRLTPQPA
>NZ_CP045643.1|WP_153287739.1|2071243_2072038_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MTDRADQTIAALRGGHDYLTSVVHGLATADLTRRSGASEWDVSQVLSHLGSGAEIGRATLEGALNGTGPRDGDFNKSVWARWDAMSPAERAEGFVHADERLVRAYEALDARAREELRVDLGFMPAPVDVATLAGLRLSEFTHHTWDVEVAFDPTAVLLPVATEPLLTQAGLLIGFLGKADALGGRHARIAVRTVSPTRSFGLDLGDSVALVDEPAEPDAVLSAPAEWWLRLVSGRHAPAHTPAEVNLKGDALTLDDLRRVFPGF
>NZ_CP045643.1|WP_153287738.1|2070616_2071144_+|MarR-family-transcriptional-regulator
MADFLAPADLPEHEQAADDGLLPSELRSWMRLLAAAGAIEQQLRAHVKDALGVSHDEFLVLCLLADQPGSSLRMTQIAELLGRPKTRLTYQVACLQHAGLITRRSACGDKRGIEVALTDKARTLLSESSRPLADAVSQAIARTACAQRYEQLHDLLPPPEAPHDGSRAAGGPAGP
>NZ_CP045643.1|WP_153287737.1|2069971_2070487_-|YceI-family-protein
MTVAVETGLWQLDPARTSVVIRHKTMWGLVTVKGVFAAVAGEGEVRSDGTAHGTVTLDVASLDTKNGKRDKHLRSADLFDAERHPTITFAVDDAVVAQDDTVAVTGQLTVRGVTRPQPVVARVTAASAEDVTLVAEFTVDRDQFDMGWNQMGMLRGLTTVVSTLVFTRVKG
>NZ_CP045643.1|WP_153287736.1|2069080_2069860_+|cell-envelope-biogenesis-protein-OmpA
MPETASLSPAAPASTRRAPASPATGAVAAASPRAAAPSRGHRIRSRIGVGPAGGFYPAPHRYQLYLSEGCPRSLRVSITLGLLGLRDSVTTTLLTGPSGTPDARVALRAAYEATWHHYDGPLTAPALCDRWSGRIVSNHTPDILRDLGELPGCRDAAGLPRLHPPSLAADIDTFRAFLDRGLTPDAPPTARSAALGSLDQRLAARTHVLGGELTAADVDLWVALTRLGAEDALSPYGRLRDYVRRLGAHPVFREATQLV
>NZ_CP045643.1|WP_153287745.1|2080762_2081464_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTSIEGSVALVTGGSRGIGRALVQGLYERGAKKVYATARDPRTVTHPDAVPLALEVTDPASVAAAAEQAQDVTLLINNAGASVNANFLESPVEDVRREFETNFYGPLLVTRAFVPVIERNGGGHILNVHSVLSWIGVLGSYSASKAAFWSQTNSLRLDLKPRGIEVTGLHVGYVDTDMAAHVDAPKSSPDAVAAQALDGIASGAFEVLADDLTRQVKVQLSEDIAVMYPQLTA
>NZ_CP045643.1|WP_153292798.1|2081683_2083159_-|MFS-transporter
MIVSMMQTLVVPILSIIQSDLGTSTANVSWVTTATLLSAAVFTPLLGRFGDMHGKKPTLIGVLLLMIAGSVLAATTTSLLWLIVGRVLQGAATAIFPLALSVLREEMPPAKLHGAMAMVSGTLAVGSGFALVAAGLLTRGADPDYHRVFWLAVALAAVALVGVLVRVPASRSTTGGRTDWLGAVTLAALLVLLLLPISQGHEWGWGSVRTLGLFVAAVVMAAVWVFVERSVRGPMVDMRMFVHRPVLFTNLAGLFLGFAMFSQFIGVAYLVQMPKELTGYGFGASVLRASVEYLLPTTVVSLLAAQLGGILVGRIGARFTLVVGAVFGVAGFAWLTLAHGSSASIILAGLLIGVAVSFGYAAMPALIVASVPHHQTGIANGLNSISRSVGSAIASAVITSLLASRTIAHLPAGVPALPAESQFTLSFAIAGVAFVMIVAVALVGLTRGATPAYAAAGESASPAEAMTGPAAGGVAELAGDRAEEKAAAATA
>NZ_CP045643.1|WP_153292799.1|2083456_2083840_+|MarR-family-transcriptional-regulator
MVSLYADLTTAAAAHGLTYSQAKALNVLRQGPVPMRSLADTLRCDASNITGIIDRLEARGLVHREASPTDRRVKNVVLSEEGAAVVVRVRDGMHATHQALGALSDAERATLDGLLSRLFQTDGHPTA
>NZ_CP045643.1|WP_153292800.1|2084986_2086186_+|glycosyltransferase
MLSIYEGFFSGGARIVHSDVVMGLHEGGQRHSVLSLNGEMYREATRQRMEDDVCFRSLTGAGVPVTSLGRGHGASDAANAFTGPELAAAARAMAGADVILSLKEQPLGLLNQAGLPRRPVVVCLHRSDPENQGAALDELRTAVADGRIAAAICCAESTRAAYAAAGIPAELLHVIPNGVDLLRFRPDPFRRALLRASLGIPADAPVIVFAARYAEMKNVPLFLRAARAWLRRRPEGQVLMCGAGMTRANAALREDMATAFGDEASLTDRVSLLGVRDDMEIVYAAADVVSLTSSSGEAAPLSLIEGMMCGAVPVATDVGDCASIVAGHGFLTPLDAEAVARAWCEAVERGAEFAPALALSRERFSRTRMIAAYAGLVERVGGGAGRVSLSVPEPLPEPF
>NZ_CP045643.1|WP_153292801.1|2086692_2088222_+|LytR-family-transcriptional-regulator
MLRTAAISLSLLLMVTAGAGWWFYEHLNGNLHSVPLTDGTASDSAGKEKADSFGRTPINILVMGSDGRTSASDCKLGGGCSQTGVQSGSGNADVEMVLHISADRSNATVMSIPRDTVTSVPACKNSATGTSTGGYSGMVNSALQYGPACQVATVHQLTGIPIDHFVQLDFSGVVKMSDAVGGVSACVDSNVYDTYSHLKLAKGTHTLKGVAALEFVRSRHGFGDGSDLGRTYAQHIFLSSMIRKFKSAGTLTNPAAVYKLADAASKALTVDTGLGSVKKLVGLATDLDKVPAERITFATMQTAPDPNNSDRVVAAPAARSLFATIADDQSLTGTSGKTSAAATATATASPVPAARIAVTVENGTGIAGRASAVAGALIDHGYNSGTTTGNAPGGAATTTLTYGTGKKAEAQTVARTLGLSSAHLQQGGGGVTLVIGTDWTSGTTFPGGSATSGAPADAKAAKADAHSQTANESKSCAKVSTYRTVSLDGVAMTPSQAYAAATTKKDSAP
>NZ_CP045643.1|WP_153287746.1|2088399_2089164_+|DUF2071-domain-containing-protein
MPTTPQPPEPVTPHAPRALPRPLLTQQWLDLAFVHWAVAPDAVAGLLPEGTVPDVLDGVTYVGLVAFRMHRVGWLHSPGVPYLGTFPETNVRLYSVDAHGRRGVVFRSMDAARLVPVLMGRAAFRLPYTWSRMDVRAEDDVITYTSSRRWPGPRGAHSRIVLRRGAPIGEPTGLEHFLTARWGMHNAFFGRTGYLPNDHPGWPLHRARLLACEENLLEAAGVAAPQGEPVSVLYSPGVPVRLGRPARPAGIPTP
>NZ_CP045643.1|WP_153287747.1|2089322_2092130_-|hypothetical-protein
MTGTTEGTFAALRTQLREAAATFADGPGALEGILLGLVDDVDRAVREPLEIFPVCHHSPASAIAMARRLREKQPKVVYLELCEDMAPLLTELRNCRLPVAVQAFATETDGFPAEWSPLSVVAPITEASAEYQAIAYALDTPGVELVLVDRSSDHVFQWDERGTRDAEPAETDAPPAEEAALHGDAVGVELGDLRPRFAELEEHLLRHGRVRHWSEWWHQYVEMPLGDSDHDTYRQVMLLIGSLFRRLAPGDSHRVRVDEDRERHMWTRMREHLAATGTDPADCLYVCGAFHAASRVEEFGVHGTDTFEIGPRTATKWQHGLIPSSHAAIEAHFGLATGSVSIAATLWAKNVGRTRVRPYRLAGQSGAGGPRARKTVAATAPVPELPAADRLTGFLGRPPVLDRLDEAELLGWSVEVVRAARRNGYLASTADAIAVFETSILLAGMRDRAKPTPYDFQDAAVTCIEKDTVPGRRDVRHIVAIMMGGDRIGQVGYDALPPLARDVHDRLAPLNLRLQQRGVQRALLDMTGRPELERCSDVLWMLRRLLPQGAARPIMGERKLGERSIQESWDLALGTHQRALIELGYEGVSIEQVLEQRLRRTAYAPRATTATVLEAVEDATLYLRGRRLPDELGTHALEVLSAERGVDGAPEVLRRVRRLLAYYRTGEPVLPPWIESFVKAGYAHYCTLLPTAFTDEDATVRQVAAMLGFLFSMEGLALSLSCDRTQLELAVAQSHPRDPSRTALLWAARTQLGHLSRADLRARCDELLGNPLVVPAYPRYLSGFVHALEPVPGLTDFVVEAVSNAFGRLPDPVLLPWLPTLITTLRSGGAELAPLLIREVGRIFPGRLAELDAWVPPWQAQPQADAEAGRTARRAGAGGGAHALLVTHPATCDALANLLGCEGTWRTAAPGPSGAALAARHPDTAVALEALLASG
>NZ_CP045643.1|WP_153287748.1|2092126_2093239_-|AAA-domain-containing-protein
MSELLRAPAEIKYAEELDWLESVDDNPKPFSWRLSPKMVRLFVLGSERSDGLDREISPKWFGDRSFVERSIVTLASDRGLLLIGDPGTGKSWLAELLSAAICRSSTLVVQGTAGTTEDHIKYSWNVSMVIAKGQSRESMIPSPIMTAMETGAIGRFEELTRSTSDVQDALISILSEKYISVPELDSDGIVFAKPGFSIIATANSRDRGVNDLSSALKRRFNFVRIPVVTNKKSEAEIVRFRTEELLRRHRIELDVPPTLLDVLLQSFADLRASAAAAGSDDEKLESALSTAEQIGVLEDAILHGNFFGERSLTAHTLASSLVGSLARREPEDLAILNKYLHGVVEPRSREEGGSWPEFLEGGREAIATLS
>NZ_CP045643.1|WP_153287749.1|2093288_2094902_-|VWA-domain-containing-protein
MTDHTADHTAGHESGHKAGHLTGHATDRTPASETADGAAPGADPDDNRRQVLYWRLLARLFDHEEQAALESASLAVVEDIGLPSGLLDPQTSVDSIVQRHPALAAEFDGLMTPGAGAGAAARSDSGSDAGSDSHGRDGDADGGGDAAESGGRDRPAEVRRAALVSKVLLNVFASGSGTVTAGQLARWQSDAGWLERALGCKPGDLRGGRAAGGAGTAAGGPGVSPTGTGGHGTTPDLSRLIPAIGPELGAIEADLVKRMRLREVLADPALAARLTPSMSLIEQLLRDKDNLSGVALANAKALIRRFVEEVAQVLRTQVEKTSVGALDRSVPPKRVFRNLDLDRTIWKNLTNWSPEEERLYVDRLYYRHTARRTTPQRLIVVVDQSGSMVDSMVNCTILASIFAGLPKVDVHLIAYDTQALDLTPWVHDPFETLLRTNLGGGTDGTAAMTLAQPKIAEPRNTVVVWISDFYEWRTDELFASMAAVHRSGARFIPVGSVTSSGRGSVNPWFRERFKDLGTPVLSGHIRKLVHELKTFLA
>NZ_CP045643.1|WP_153287750.1|2094898_2096317_-|hypothetical-protein
MVPADQGGGVMRADLLAGTVPGLDEVLTAVDAFDRALVGGLLRPQSAQAAGLTELADAVAGTPLAARAAEAAGKAAAGAASEDDLVALAAARAALLGSVHDALVSRLDEATGRDRVQETPPPPADPRPANLLAAARSWLSDLARCGWRGIDHEVVSGVAPAVSAMLPDPALRRLATLLDGFAAELAASCPGASLDRVPVRRWGDLWSRAMLLTVPGAAGSPATGTATGRLLPLGVDVQEHATAVQAQVHAVFEPADGTAPRLVRAAVSVPKPDTVVGAGLWQLLRPHMSLLAAVSEGRAMDLADMPVTAEGDLLWSDERARPGEPADAFATARVVLPTATDAATAPLDRHPTRVAAPVFLEGYTVRKADDTLTFTVAGHTLAVDTDRVPAAGPLTPEAVAASGACIGLLRWDAGAFGVQPLAVETTVRKKAVAIHAGGWAGGTTDKAGVRAEKAATDAVAVLRERAGRLLRK

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Crispr_ID: NZ_CP045643_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_4

2344418-2344506

Orphan

Consensus_repeat	Method
ACCGACAACAACCCGCAGCCGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_4

>merge|NZ_CP045643|4|2344418-2344506|CRISPRCasFinder
ACCGACAACAACCCGCAGCCGCACACCCGCACCCCCACCCGCCCCACCGCCGACGAACTCGACGTACCGACAACAACCCGCAGCCGCCG

>NZ_CP045643|4|4|2344418-2344506|CRISPRCasFinder
ACCGACAACAACCCGCAGCCGCAC	ACCCGCACCCCCACCCGCCCCACCGCCGACGAACTCGACGT
ACCGACAACAACCCGCAGCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153287929.1\|2344778_2346071_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP045643.1\|WP_153292828.1\|2350516_2351839_-\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|163175
NZ_CP045643.1\|WP_153287935.1\|2353018_2353315_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153287932.1\|2348064_2349069_+\|cation-transporter	unknown	unknown	gnl\|CDD\|376562
NZ_CP045643.1\|WP_153287926.1\|2341191_2342364_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP045643.1\|WP_153287920.1\|2333010_2334156_-\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP045643.1\|WP_153287930.1\|2346367_2346760_-\|ribonuclease	unknown	unknown	gnl\|CDD\|238340
NZ_CP045643.1\|WP_153287927.1\|2342408_2343080_-\|response-regulator	unknown	unknown	gnl\|CDD\|225107
NZ_CP045643.1\|WP_153287925.1\|2339975_2340986_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|275173
NZ_CP045643.1\|WP_153292829.1\|2353457_2354906_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224089
NZ_CP045643.1\|WP_153287934.1\|2352136_2352952_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224332
NZ_CP045643.1\|WP_153287931.1\|2346846_2347752_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP045643.1\|WP_153287923.1\|2336545_2337550_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380535
NZ_CP045643.1\|WP_153292827.1\|2339109_2339847_-\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|225099
NZ_CP045643.1\|WP_153287924.1\|2337690_2338686_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380535
NZ_CP045643.1\|WP_153287922.1\|2335490_2336549_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP045643.1\|WP_153287928.1\|2343235_2344264_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381306
NZ_CP045643.1\|WP_153287921.1\|2334675_2335494_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP045643.1\|WP_153287933.1\|2349232_2350348_-\|allantoicase	unknown	unknown	gnl\|CDD\|237319
NZ_CP045643.1\|WP_153287936.1\|2354953_2355268_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153287929.1\|2344778_2346071_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	9.51843e-34
NZ_CP045643.1\|WP_153292828.1\|2350516_2351839_-\|allantoinase-AllB	gnl\|CDD\|163175	TIGR03178, allantoinase, allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.	0
NZ_CP045643.1\|WP_153287932.1\|2348064_2349069_+\|cation-transporter	gnl\|CDD\|376562	pfam01544, CorA, CorA-like Mg2+ transporter protein. The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. The family includes the MRS2 protein from yeast that is thought to be an RNA splicing protein. However its membership of this family suggests that its effect on splicing is due to altered magnesium levels in the cell.	1.00559e-49
NZ_CP045643.1\|WP_153287926.1\|2341191_2342364_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	8.2562e-99
NZ_CP045643.1\|WP_153287920.1\|2333010_2334156_-\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	8.39128e-89
NZ_CP045643.1\|WP_153287930.1\|2346367_2346760_-\|ribonuclease	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	2.02325e-44
NZ_CP045643.1\|WP_153287927.1\|2342408_2343080_-\|response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.70364e-66
NZ_CP045643.1\|WP_153287925.1\|2339975_2340986_+\|dehydrogenase	gnl\|CDD\|275173	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars].	1.69296e-101
NZ_CP045643.1\|WP_153292829.1\|2353457_2354906_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	5.41067e-95
NZ_CP045643.1\|WP_153287934.1\|2352136_2352952_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.20588e-71
NZ_CP045643.1\|WP_153287931.1\|2346846_2347752_-\|EamA-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	9.30335e-08
NZ_CP045643.1\|WP_153287923.1\|2336545_2337550_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380535	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	1.43646e-102
NZ_CP045643.1\|WP_153292827.1\|2339109_2339847_-\|UTRA-domain-containing-protein	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.02294e-64
NZ_CP045643.1\|WP_153287924.1\|2337690_2338686_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380535	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	3.89134e-98
NZ_CP045643.1\|WP_153287922.1\|2335490_2336549_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	3.43068e-57
NZ_CP045643.1\|WP_153287928.1\|2343235_2344264_+\|aldo/keto-reductase	gnl\|CDD\|381306	cd19080, AKR_AKR9A_9B, AKR9A and AKR9B families of aldo-keto reductase (AKR). The AKR9A family includes Aspergillus nidulans sterigmatocystin biosynthesis dehydrogenase StcV, Aspergillus flavus norsolorinic acid reductase (NOR), and Phanerochaete chrysosporium aryl-alcohol dehydrogenase [NADP(+)] (AAD), are founding members of aldo-keto reductase family 9 member A1-3 (AKR9A1-3), respectively. StcV may be involved in the dehydration of 5'-hydroxyaverantin to form averufin. NOR is involved in aflatoxin biosynthesis. AAD (EC1.1.1.91) is involved in lignin degradation and reduces aromatic benzaldehydes to their respective alcohols in the presence of NADP(H). The AKR9B family includes Saccharomyces cerevisiae aryl-alcohol dehydrogenases AAD14p, AAD3p, AAD4p, and AAD10p, which are founding members of aldo-keto reductase family 9 member B1-4 (AKR9B1-4), respectively.	6.96689e-165
NZ_CP045643.1\|WP_153287921.1\|2334675_2335494_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	1.5535e-94
NZ_CP045643.1\|WP_153287933.1\|2349232_2350348_-\|allantoicase	gnl\|CDD\|237319	PRK13257, PRK13257, allantoicase; Provisional.	2.13536e-172

>NZ_CP045643.1|WP_153287928.1|2343235_2344264_+|aldo/keto-reductase
MRYRLLGRTGLRVSELFLGDMTFGEQDGVGAPKEECARILDAYAEAGGNVVDTAVNYRGGASEEIVGELLKGRRDRFVLSTKYTISRDGADPNAAGNHRKNLALSLETSLRRLGTDYIDIYWVHIWDRNTPVEETMRALDDAVRSGKVLYVGISDAPAWVVSRANTLAEWRGWSPFAALQVPYSLLSRDAERELLPMAEEFGMSVAAWSPLQNGILSGKYTRPGGVLPGTATRLSPEAVGELERTVAEAVQVAADELGASAAQVAIAWTMARSPAVHPIVGARHVTQLMDNLGAAELTLPAELVAGLEEVTGFRTGFPTDFIDETSTWVYGTAGRRVIPRTH
>NZ_CP045643.1|WP_153287927.1|2342408_2343080_-|response-regulator
MKAIRLLLVDDDPLVRAGLSFMMGGTDDIEIVGEAADGSEVEALVDRTRPDVVLMDIRMPAVDGLTATERLRHRQNAPQVLVLTTFHADEQVLRALRAGAAGFVLKDTPPADIVDAVRRVAAGDPVLSPTVTRRLMEQVAGDPADTRRSAARDRIAGLNDREREVAVAVGRGASNAAIAAELYMSVATVKTHVSRILAKLGLDNRVQIALLAYDAGLFEEDGH
>NZ_CP045643.1|WP_153287926.1|2341191_2342364_-|cytochrome-P450
MIDLGEYGARFMKDPYPVYAELRERGPVHWVRMPAPGAYECWLVVGYEEARAALADPRLSKDSTKTGLTSLEDELMGRHVLVTDPPEHTRLRSLVAGAFTMRRVAALRPRVQRITDDLLDAMLPEGRADLVDSFAYPLPITVICELLGVPDIDRAAFRRMSNEIVTPTDGVGEFAAVKELAGYLDELIEDKRCTAPAGDLLGDLIRTRAEDGDRLSRGELRGMAFILLVAGHETTVNLITNGVHTLLAHPGQLAALRSDMTLLDGAVEEVLRFEGPVETATYRYAAEPMEIGGRAIAVGDPVMIGLDAANRDAAHCPDPHRFDIRRTPRSHLAFGHGVHYCLGAPLARLEARVALRSLLERCPDLALDGPPGEPLPGMLMRGVRSLPVRW
>NZ_CP045643.1|WP_153287925.1|2339975_2340986_+|dehydrogenase
MRIGLIGTGRIGTFHATALDRHREVGSLIVTDADPARAQELADRLGATAAPSVDEIFTWGVDAVVITAATSAHAELIGRAARSGLPVFCEKPIALDLPGTLAALAEVEAAGTVLQLGFQRRFDSGYTAAREAVRSGRLGRLHTVRAMTSDQSPPPAAYLPLSGGLYRDCLVHDFDMLRWVTGHEVVEVYAMGSDAGPAMFREARDIDTAAAVLTLDDGTLATATATRMNGAGYDVRMELAGDLDQIGVGLDDRTPIASTEPAGPPPADKPWTGFLERFGPAYEAELAAFVEVVRGERANPCDGREALHALRIAEACELSRLERRPVRLAEIPAGRD
>NZ_CP045643.1|WP_153292827.1|2339109_2339847_-|UTRA-domain-containing-protein
MSLQLSVDRSSPVPLYFQLSQQLEAAIEHGTLTPGSLLGNEIELAGRLGLSRPTVRQAIQSLVDKGLLVRRRGVGTQVVHSQVKRPLELSSLYDDLEAAGQRPATRVLVNTVVPASAEVAVALGVAEGSDVHRVERLRLAHGEPMAYLCNYLPPALLELDSARMEATGLYRLMRAAGITLHSARQSVGARAATEEEGERLGEPAGAPLLTMQRTTFDDTGRAVEFGTHTYRASRYSFEFQLLVRP
>NZ_CP045643.1|WP_153287924.1|2337690_2338686_-|substrate-binding-domain-containing-protein
MRTARTAAAVIAVIALAAGCSSSGGKDSEDKASGSGSGSGKAAGTPRLKIAMVTHSGEGDTFWDIVQSGAKAAAGKDNVDFLYSNDKEANGQAQLVQAAIDKKVDGIVVTLAKPEAMKDVLAKAEAAGIPVVTINSGAEFSKQFGALAHFGQDESVAGEAIGDELNKRGLKKAVCVIHEQGNVSLEQRCAGVKKTFDGSVENLNVDGTNAPASQSSIEAKLQATKGIDAVITLGAPVAAVAVKAKADAGSKAEIDTFDLNAEVVKRLKAKEVGFAVDQQPYLQGYEAIDMLWLYKNNGDVLGGGKTVLTGPAIVTEKDAPQLEKYTARGTR
>NZ_CP045643.1|WP_153287923.1|2336545_2337550_-|substrate-binding-domain-containing-protein
MARTRTWVSIALAGALGASLAGCSSTGGKRAEDARKAASAQGRAAVDTPRWTFAMVTHSGDGDTFWDIVQSGAKQAAVKDNINFLYSHNAEAQQQAQLVDAAVDKRVDGIIVTLAKPDAMKAAVARAEKAGIPVITVNSGSEQSKQFGALTHIGQDETIAGEAVGDELNKRGRKKALCILHEQGNVGHEQRCAGVKKTFHGTVQDLYVQGTSMPDVQSSIGAKLQADKSIDSVVTLGAPYADTAVKAKKDAGSDAEVDTFDLNAKVAAELKDGTLGFAVDQQPYLQGYEAVDLLWLYKYNADVLGGGKPVLTGPQIITKDQAAALEEYTKRGTR
>NZ_CP045643.1|WP_153287922.1|2335490_2336549_-|ABC-transporter-permease
MTATAPAPSPGTKADDERLVKTSPLRKLMGRPELGSVVGAIAVFLFFAIFADSFVRAASLSTVLYASSTIGIMAVPVALLMIGGEFDLSAGVMVTSSALISSMLSYQLTANVWVGVLVSLVVTLGIGVFNGVMLTRTDPPSFIITLGTFLMLTGMNLGFTKLISRTVSTKSIADMQGFSSAKDVFASTITIGGVDFKITILWWLALVVVATWILLRTRVGNWIYAVGGGEMAARAVGVPVNKTKIGLYMGVAFGAWVSGQHLLFSFDVVQSGEGVGNELIYIIAAVIGGCLITGGYGSAVGAAVGALIFGMVSKGIVFAEWNPDWFKFFLGVMLLLATLLNHWVRKRAEVTK
>NZ_CP045643.1|WP_153287921.1|2334675_2335494_-|ATP-binding-cassette-domain-containing-protein
MTTDTEKTEAVPAEGTALVELDDVSKYYGNIRALEGVSLVVHAGEISCVLGDNGAGKSTLIKIIAGLHQHDAGTLRIEGEETRLSSPREALDRGIATVYQDLAVVPLMPVWRNFFLGSEPSKGAGPFKRMDVDFMRRTTHAELLRMGIDLRDVDQPIGTLSGGERQCVAIARAVYFGAKVLVLDEPTAALGVKQSGVVLKYVAAARDAGLGVVLITHNPHHAYLVGNRFVLLKRGAMFGSHTREEITLDELTRQMAGGSELDDLRHELERTT
>NZ_CP045643.1|WP_153287920.1|2333010_2334156_-|ROK-family-glucokinase
MSTYRDLAHRGSARATVLRTVGTRERRSHLTAPRVPTVGIDIGGTKVMAGVVDADGNILEKLRAETPDKSKSPKVVEDTIMELVLDLSDRHDVHAVGIGAAGWVDAERNRILFAPHLSWRNEPLRDRLAGRLAVPVLVDNDANTAAWAEWRFGAGRGEDNLVMITLGTGIGGALLEDGQVKRGRFGVAGEFGHMQVVPGGHRCACGNRGCWEQYSSGNALVREARELAAADSPVAYGIIEHVKGNIADITGPMITELAREGDAMCIELLQDIGQWLGVGIANLAAALDPSCFVIGGGVSAADDLLIGPARDAFRRHLTGRGYRPEARIARAQLGPEAGMVGAADLARLVARRFRRAKRRRVERYERYERFTESRRTTQGTP
>NZ_CP045643.1|WP_153287929.1|2344778_2346071_-|sensor-histidine-kinase
MTADRPPHIPGNLSAPGLPVPPTLLLPGRRWLLPSAVIAELDPGQSTEGGRPRRTVRDWIVDFGWFLLAVVIGVLAADTLTSDPNIPDGLAVADQWIGALACAAVWLRRRWPLGLALAMIPVGMISNTAGGAGLVALFTLAAHRPFPYVAWVAGSQLALLPAYFWLRPDPDLPYLAAVLVTALLTAAVVGWGMFVRSKRQLMLSLRDRARRAETEAALRAEQAQRLAREAIAREMHDVLAHRLTLLSVHAGALEFRPDAPREEVARAAGVIRESAHEALQDLREIIGVLRAGDADDAGRPQPTLAAVDALVAESREAGMKVVLDLLVVDPAGVPASIGRTAYRIAQEGLTNARKHAPGAEVTVRVSGGFGDGLTVTVRNPAPSGEVPHVPGSGQGLIGLTERAALAGGRLSHGVEGDGGFEVRAWLPWGG
>NZ_CP045643.1|WP_153287930.1|2346367_2346760_-|ribonuclease
MRFPPRITRTGSLVALMSALLIGGSGVVPADAAATAVGSVCYGALPSQAHDTLDLIASGGPFPYPQDGVVFQNREGVLPAQSASYYHEYTVITPGSPTRGAKRVVTGKKTREDYYTSDHYVTFKLINFGC
>NZ_CP045643.1|WP_153287931.1|2346846_2347752_-|EamA-family-transporter
MSTIAAPGALAPRRAWLTDLPLLLVAAVWGASYLAAKDVTTARTVIAVLVLRFAVALPVLVVAGRRSLRALSAAQWRGGATLGLILSGIFLLETYGVVHTSATNAGLVISLTMIFTPLAEAAVTRVRPARPFLAAAGISVLGVVLLTQSGGFTRPSPGDLLMLLAAVARTVHVLVMSRSKAVRGAGALPLTTVQLGTAVVVFALLSTGAGTTPWGVAADFGAREWAGLLFLAVFCTLFAFFVQMWAVRRTSPSRVGLLLGTEPLWAAAAGIALGGERLGAVGLLGGALVVAGTVWGRRAAG
>NZ_CP045643.1|WP_153287932.1|2348064_2349069_+|cation-transporter
MIVSVVSMPEGVVVRTDLSEARGRLTAPGFVIVDIDQEDDPPPEGHPLSRRLGLDAEIWEWIGERQEHVRADYREGAAAGIVPVVCGDRIVYVQIHADEEHLITVHRGPVELIDTFVERLRHDRPTDAVTALFLILQGVLESFRRAVTEAHLEVEDLEEAMFEERRPQHAERLALLRRRAAQLHRVFLPYASVVQEILVRRRMTNHAIPEERLAMNQLHEHTVQLVLLEIESLRDATRRAAGSYASIVADQQNLVINRLTVVSMIFLPLSFLTGFFGMNFNFLTNRLTTEDSFLALGLGLQAASVVAALYYVLYRTHWRQLRDSRSHGTDNDEA
>NZ_CP045643.1|WP_153287933.1|2349232_2350348_-|allantoicase
MTAIPRFTGDANPYGGGDPYADYRTAEFPFARDTDLADRRLGAGVVAANDEFFAERENLLGSGRAEFDPEHFGHKGKIMDGWETRRRRGASADHPWPTAEDHDWALVRLGAPGVIRGIVVDTAHFRGNHPQAVSVEGVSMPGSPSPRELLADEVKWTTLVPRTAVGGHAANGFAVDVEQRFTHLRVNQHPDGGIARLRVHGEVVPDPAWLAALGTFDVVALENGGLAEDASDRFYSPATNTIQPGRSRKMDDGWETRRRRDTGHDWIRYRLVARSEIRALEVDTAYLKGNSAGWASVSVRDGEDGEWREIVPRTRLQPDTNHRFALTAPAVGTHARVDIFPDGGISRLRLFGSLTPEGTADLAARYQELGG
>NZ_CP045643.1|WP_153292828.1|2350516_2351839_-|allantoinase-AllB
MLRSTRVITPEGTRAASVAVAGGRITAVLPHDAEVPAGARLEDFGDDVLLPGLVDTHVHVNDPGRTEWEGFWTATRAAAAGGITTIVDMPLNSLPPTTTVDHLRTKRDVARSKAHVDVGFWGGALPDNVKDLRPLHDAGVFGFKAFLSPSGVEEFPELDQDRLARSLAEISGFGGLLIVHAEDPHHLDAAPHKGGRRYADFLASRPRDAENTAVGNLVAQARRLDARVHVLHLSSSGALPLIAAAKAEGVRLTVETCPHYLTLTAEEVPDGASEFKCCPPIREAANQDLLWQALADGTIDCVVTDHSPSTADLKTDDFATAWGGVSGLQLSLPAVWTEARRRGHDLEDVVRWMSTRTARLVGLDHRKGAVLAGHDADFAVLAPDETFTVDPAALEHRNPVTAYAGKTLSGVVKSTWLRGRRVMSEGRFTDPAGELLSRHP
>NZ_CP045643.1|WP_153287934.1|2352136_2352952_+|helix-turn-helix-domain-containing-protein
MPTSRASDAPAQNASAKSSAPSGGVQSLERAFDLLERMADAGGEVGLSELSASSGLPLPTIHRLVRTLVACGYVRQQPNRRYALGPRLIRLGESASRLLGTWARPYLARLVEETGETANMALLDGDEIVYVAQVPSKHSMRMFTEVGRRVLPHSTGVGKALLANTPADEVRALLGRTGMPAATEKTITTPDGFLAALEEVRRLGYAVDDNEQEIGVRCLAVSVPDSPTAAAISISGPAGRVTEAATEKIVPVLQQVAAELSEALASSGPNA
>NZ_CP045643.1|WP_153287935.1|2353018_2353315_-|hypothetical-protein
MAVDSGAVGGQGSGGGHRPTGHRPADPGFTDPGFTDPGFTDSGFTDSGFTDPGFTDREEREMQRREEERMPGVPLGAWSRGLAAGRGGRPSRHRCDGS
>NZ_CP045643.1|WP_153292829.1|2353457_2354906_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MDRSLGSRQLAGLLSAAPHTDGRPGYRALADGVRTLLLHGRIALHVRLPAERELASALGISRATVTAAYDLLREDGFARSRRGAGTWTELPDGHRPANVASFPADDGVIDLAVAAPGAPEAQLAEALAEAARLLPRQASTPGYHPYGMTELRAAVAERFTRRGLPTLPDQILITNGAQQALSLTLGLLGRPGDRILVENPSYPNALDTMRRAGLRTTPVPVTEDGWDPGLIDCALRQAAPRLAYLIPDFHNPTGRLMPPEQRLAVMESARATGTWLVIDETMTDIALDVPPAAPFASLAPRGTGEQIVTVGSLSKTHWGGLRLGWVRAGSRLITELATARVPADMGGSVLNQLVGLGLLARTDQVLSERLPRLRAQRDALAESLGRHLPDWRWKSPPGGLSLWIDLGRPIASQLARAALTRGVRVEGGARFGADPGTHESRLRFPYTLAPEVLDEAVRRVAAALDGGLDAAGADTGRPRWIA
>NZ_CP045643.1|WP_153287936.1|2354953_2355268_-|hypothetical-protein
MLRSLGQRSVTGSDEDPRVAELRTAVSRLRRELAVHPVEFPDRGIAEDELAALAAMALSGVPEIPRLRRSLLLIAGAIGSVSALASGLAEVRSAVELFGRPPLR

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Crispr_ID: NZ_CP045643_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_5

2479708-2479812

Orphan

Consensus_repeat	Method
CGAAGACGGACGGCCGGCGCGAAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_5

>merge|NZ_CP045643|5|2479708-2479812|CRISPRCasFinder
CGAAGACGGACGGCCGGCGCGAAGCCACTCGGCCGAGGACAAAGCCGGTCAGCCGGAGGCGAAGCCACTCGGCCGAGGACGAAGACGGACGGACGGCGCGAAGCC

>NZ_CP045643|5|5|2479708-2479812|CRISPRCasFinder
CGAAGACGGACGGCCGGCGCGAAGCC	ACTCGGCCGAGGACAAAGCCGGTCAGCCGGAGGCGAAGCCACTCGGCCGAGGA
CGAAGACGGACGGACGGCGCGAAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153288015.1\|2488814_2489534_+\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045643.1\|WP_153288005.1\|2475605_2476277_-\|ThuA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377643
NZ_CP045643.1\|WP_153288016.1\|2489536_2490103_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|238985
NZ_CP045643.1\|WP_153292850.1\|2482982_2484353_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225822
NZ_CP045643.1\|WP_153288013.1\|2486858_2488553_+\|nitrite/sulfite-reductase	unknown	unknown	gnl\|CDD\|223233
NZ_CP045643.1\|WP_153288012.1\|2485917_2486490_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP045643.1\|WP_153292849.1\|2478595_2479408_+\|NmrA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|187578
NZ_CP045643.1\|WP_153288009.1\|2479847_2481014_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|377085
NZ_CP045643.1\|WP_153288004.1\|2474184_2475129_+\|homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|181899
NZ_CP045643.1\|WP_153288007.1\|2476805_2477507_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP045643.1\|WP_153288011.1\|2484434_2485811_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288002.1\|2470970_2471867_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	unknown	unknown	gnl\|CDD\|379346
NZ_CP045643.1\|WP_153288010.1\|2481031_2482669_+\|DNA-alkylation-response-protein	unknown	unknown	gnl\|CDD\|183199
NZ_CP045643.1\|WP_153288006.1\|2476366_2476768_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319901
NZ_CP045643.1\|WP_153288000.1\|2468748_2469843_-\|D-TA-family-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|143494
NZ_CP045643.1\|WP_153288003.1\|2471934_2473827_-\|DUF2264-domain-containing-protein	unknown	unknown	gnl\|CDD\|378358
NZ_CP045643.1\|WP_153288001.1\|2470198_2471026_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP045643.1\|WP_153288008.1\|2477508_2478444_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378976
NZ_CP045643.1\|WP_153288017.1\|2490099_2491050_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP045643.1\|WP_153288014.1\|2488611_2488818_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153288005.1\|2475605_2476277_-\|ThuA-domain-containing-protein	gnl\|CDD\|377643	pfam06283, ThuA, Trehalose utilisation. This family consists of several bacterial ThuA like proteins. ThuA appears to be involved in utilisation of trehalose. The thuA and thuB genes form part of the trehalose/sucrose transport operon thuEFGKAB, which is located on the pSymB megaplasmid. The thuA and thuB genes are induced in vitro by trehalose but not by sucrose and the extent of its induction depends on the concentration of trehalose available in the medium.	1.16812e-100
NZ_CP045643.1\|WP_153288016.1\|2489536_2490103_+\|adenylyl-sulfate-kinase	gnl\|CDD\|238985	cd02027, APSK, Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.	6.95504e-80
NZ_CP045643.1\|WP_153292850.1\|2482982_2484353_+\|GAF-domain-containing-protein	gnl\|CDD\|225822	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].	8.50946e-33
NZ_CP045643.1\|WP_153288013.1\|2486858_2488553_+\|nitrite/sulfite-reductase	gnl\|CDD\|223233	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism].	2.21596e-175
NZ_CP045643.1\|WP_153288012.1\|2485917_2486490_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.47566e-08
NZ_CP045643.1\|WP_153292849.1\|2478595_2479408_+\|NmrA-family-transcriptional-regulator	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.97737e-45
NZ_CP045643.1\|WP_153288009.1\|2479847_2481014_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	2.47602e-45
NZ_CP045643.1\|WP_153288004.1\|2474184_2475129_+\|homocysteine-S-methyltransferase	gnl\|CDD\|181899	PRK09485, mmuM, homocysteine methyltransferase; Provisional.	1.65553e-147
NZ_CP045643.1\|WP_153288007.1\|2476805_2477507_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.26688e-13
NZ_CP045643.1\|WP_153288015.1\|2488814_2489534_+\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.83487e-108
NZ_CP045643.1\|WP_153288002.1\|2470970_2471867_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	gnl\|CDD\|379346	pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase. This domain includes the enzyme Phosphoenolpyruvate phosphomutase (EC:5.4.2.9). This protein has been characterized as catalyzing the formation of a carbon-phosphorus bond by converting phosphoenolpyruvate (PEP) to phosphonopyruvate (P-Pyr). This enzyme has a TIM barrel fold.	1.33842e-76
NZ_CP045643.1\|WP_153288010.1\|2481031_2482669_+\|DNA-alkylation-response-protein	gnl\|CDD\|183199	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional.	3.15137e-172
NZ_CP045643.1\|WP_153288006.1\|2476366_2476768_+\|glyoxalase	gnl\|CDD\|319901	cd07235, MRD, Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.	3.9461e-60
NZ_CP045643.1\|WP_153288000.1\|2468748_2469843_-\|D-TA-family-PLP-dependent-enzyme	gnl\|CDD\|143494	cd06820, PLPDE_III_LS_D-TA_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Low Specificity D-Threonine Aldolase-like. This subfamily is composed of uncharacterized bacterial proteins with similarity to low specificity D-threonine aldolase (D-TA), which is a fold type III PLP-dependent enzyme that catalyzes the interconversion between D-threonine/D-allo-threonine and glycine plus acetaldehyde. Both PLP and divalent cations (eg. Mn2+) are required for catalytic activity. Low specificity D-TAs show similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on its similarity to AR, it is possible that low specificity D-TAs also form dimers in solution. Experimental data show that the monomeric form of low specificity D-TAs exhibit full catalytic activity.	3.58883e-124
NZ_CP045643.1\|WP_153288003.1\|2471934_2473827_-\|DUF2264-domain-containing-protein	gnl\|CDD\|378358	pfam10022, DUF2264, Uncharacterized protein conserved in bacteria (DUF2264). Members of this family of hypothetical bacterial proteins have no known function.	5.50313e-139
NZ_CP045643.1\|WP_153288001.1\|2470198_2471026_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.31004e-06
NZ_CP045643.1\|WP_153288008.1\|2477508_2478444_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	3.23529e-44
NZ_CP045643.1\|WP_153288017.1\|2490099_2491050_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>NZ_CP045643.1|WP_153292849.1|2478595_2479408_+|NmrA-family-transcriptional-regulator
MTVVVTGASGRTGRRVAEAARAAGFRVRAVSRARGFDWTDRSTWADVLRGADAAYLAHPADIGSPAAAGAVGALAREAVGLGVRRLVLLSSRGEEQARPAEEALRKSGADWTVVRAAWFAQNFSEGPLVDGLRHGELVFPAGEVREPFIDVRDIADVVVAVLTAGGRYVGRDLEVSGPRLLTFRDAVAEIAGATGGELAYVPVTAREYGDVLAGFGVPSEEAEFLVGLFGSLLDGRNAHLSDGVRQVLGREPRDFTDFAREAAAAGVWKA
>NZ_CP045643.1|WP_153288008.1|2477508_2478444_-|helix-turn-helix-domain-containing-protein
MDALSGLLEGPRARGAFMIRATFDPPWCVRVEDRAPLTVMLVVRGRAWVTPGEGEPVLLRAGDLAIARGPDPYTCADDPGTAPQAVILPGGECAYPDGRSLRGHWDLGVRSWGDRPDGSTVLLIGTYMMRGEIGGRLLDALPPLLSLTQDVWHCPLTPILAEEMARDEPGQEVVLDRLLDLLTIAALRAWFSRPQAAAPAWYRALADPVVGRVLRLLQDDPAHPWTVAELAVKAGVSRAALTRRFGELVGEPPMTYLTGRRLALAADRLRDTDDTLGSIARRVGYGSAFALSSAFKRVYGISPQEHRTRAA
>NZ_CP045643.1|WP_153288007.1|2476805_2477507_-|helix-turn-helix-domain-containing-protein
MASGCVERASRLPGAVVWSRAVSTPAEAVRPVLPDGCMDLLWTEGRLLVAGPDTRAYVPGGAPADWAGVRFFPGTAPALLGVPADELRDLRVDLADLWPAAEVRRLAARIDAAADPVTALEEVALDRAAGTGPPDPLPREIVAALGAGRPAAVTAVRLGLSTRQLHRRCLAAFGYGPRTLTRILRLQRALALARDGVPFAEVAGRSGFADQPHLARDVKEFAGMPLGELLARS
>NZ_CP045643.1|WP_153288006.1|2476366_2476768_+|glyoxalase
MTPRFDVIGLVASDMAATLAFYRRLGLVFPEGAEDQPHVEAGLPGGLRLAIDTEETIRSFHPGWRPGAAGGGRASLAFRCDSPAEVDSLYEDLVGAGHHGELKPWDAVWGMRYAVVHDPDGNGVDLFAHLPGK
>NZ_CP045643.1|WP_153288005.1|2475605_2476277_-|ThuA-domain-containing-protein
MANRVLVHTRTTAYRHDSIPAAVAAVRSLGDTHGFDVVATEDPGRFEGSLDAYAAVVFLSTSGDVLTPEGRIRLAAYVEDGGGFVGVHAAACTEYDWPYYGELLGARFDRHPDLQPGRALVADRTHPATRHLPPVWEFTDEWYDFRPGPDSSARVLVRADESSYEGGGMGDDHPLVWCREQGAGRSFYTALGHTAQAYEDPDFRAHLLGGITWAARGPAASGH
>NZ_CP045643.1|WP_153288004.1|2474184_2475129_+|homocysteine-S-methyltransferase
MSTDASPGDRPRALADALASGTVVLDGGMSNQLEAAGHDLSDELWSARLLAERPEAITEAHLAYFEAGADVAITSSYQATFEGFARRGIPYGRAAGLLRLSVGSAREAARRARAGGVTRPLWVAASAGPYGAMLADGSEYRGRYGLSVAELERFHRPRLEVLAAAAPDVLALETVPDTDEARALLRAVRGLGVPAWLSYSVAGDRTRAGQPLEEAFALAADADEVIAVGVNCCAPEDVDAAVGIAARVTGKPVVVYPNSGEVWDARARAWSGRSTFGAGQVVGWRRGGARLIGGCCRVGPAAITGIRESLASGR
>NZ_CP045643.1|WP_153288003.1|2471934_2473827_-|DUF2264-domain-containing-protein
MPPLPLSPPSFRALPEDRALSPYTGLTRAHWEAAADSLLAAVAPYATADGALYHLPADRTSWSGRLSDGLEGYARTLLLAAFRGDEKVLERYADGLAAGTDGVWPRVRDRGQPLVEAASVALALRLTRPLLWDRLDDAVRQRAAGWLGDALTAEPWPCNWELFPVTVGGFLAEIGHEPEASRAAVDRGLDRIEQWYLGDGWYSDGPGRAFDYYNGWAMHLYPVLHARLAGDERLLGLYGGRLARHLEDYARLFGADGAPVHQGRSLTYRFATAAPLWLGALTGRTPLAPGQTRRLASGALRHFLDRGAVDDRGLLTLGWHGPDESVLQGYSGPASPYWASKGFLGLLLPSDHEVWTAHEEPGPTDRADAVTAVGPPNWLLQTTASDGLVRLHNHGSEDVRWDPYYTRLAYSTVTRPSAPARDADSTADGVPAGDDAPAHDSAPTGDDAPTGNDAPTRDSASAGHSASCDNSVIVGGDPSRTRIEPLGVGDGWAASRHSNGDGVRVTSLVLAHGAVEVRAHLVAGAAPGTPVRVTGWPHGPAARSELHSLHGLSEGAGVAGADATLFVALARLTAEPEPRPLAELVSVTVSVTVEGAHDVRVSWASGPSARFRFSAVDGGSTVPSWAVEPL
>NZ_CP045643.1|WP_153288002.1|2470970_2471867_-|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein
MNADQRHPSRPPDPRTGDPAHPAAAVRRTASRPTPFAALHGTGSPLLLPNAWDHASAALLAGGGFAAIGTTSLGVAASAGLPDGAGATRELTVRLARQLAAGPYLVSVDAEDGFAQDPDEVAALARELAAAGAAGVNLEDGLGPAEAHAAKIAAVKAAVPDLFVNARTDTHWLGDGTDDRDTLHRLDLYQQAGADCVFVPGLTDPTRISALVKSLDVPLNILYSPSGPPVAHLADLGVRRVSLGSFLYRRALGAVLDAVGDIRAGRPAGGTAPAYDAVQALSRRSSRPTGPGYPRRPR
>NZ_CP045643.1|WP_153288001.1|2470198_2471026_+|alpha/beta-fold-hydrolase
MPDRRSHHDVRGSGPVLLILPGGAGHPMGLEGATARLAERFTVVTSDPLGLSLGPLDGPVGEQRVEAWSDGAHRLLDSLLPDDESAYVFGSSSGGIVALDLLARHPRRLRHVVAHEPPSLAVLPDAARQRAMIDEVDEIGRARGLGAAMARLQAGLVGGTWDGPPASVPEVDPDTPMGVFLTHVLRPFTTHTPDLPALKSLSARLTLGAGHDSRGQLPYRTTALLADLSGGDFAEFPGGHLGVIEHPVTFADRLTALFTGAAEGTRGLSVGRISD
>NZ_CP045643.1|WP_153288000.1|2468748_2469843_-|D-TA-family-PLP-dependent-enzyme
MVEQLPEGLVTPVLVVDADVLDRNIARMAQAARTGGFALRPHAKSHKCAEIAGRQLRAGASGLSVATLSEAEVLAAAGVDDLFVACPLWLDAGRARRLHRLADKVALRVGADSVQAVRRLADAVRGSDRRVEVLVEVDCGARRTGVRAADAGRVAEAGADAGLRVVGAFTFPAHGYDHDPGARERAARDEEQALAEAAESLRERGLDAQVLSGGSTPTAGRHRAGPVGELRPGVYVFNDAQQLAIGTCTADDLALCVATTVISRPARDRFVLDAGSKVLGADRSPWVTGHGHLPRYPDATVTALWEHHAMVRLPEGAPAPALGSVLALVPNHVCTPVNLADELLIARGGVELDRWRVAARGANT
>NZ_CP045643.1|WP_153288009.1|2479847_2481014_-|YihY/virulence-factor-BrkB-family-protein
MHQAKETPERPPSGRFHRARALYRNVSKRRTAWLLLKDTVNSCMEYRILGLAAESAFFTLLSVPPLLLSLIGLLGYVDDWTGAHSIASLESNILEASRTVLTDKGVHQIAEPILHDVMKGGRPDVISIGFLFALWSGSRAVNVFVDTITVMYGLDGTRGIVKTRMMSFLLFVVALLIGSIALPLMVAGPDAVVQIVPWSATLVQVLYWPVVIVLSVVFLTTLYHVSVPVRSPWVEDVPGALVALAMWVLGSFLLRIYLTSTVEGPTIYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDRVWPAAATAAARAANERLRHEQAAEYVARAAASLATDPDPDDPDMPSEFPERWSRFLPPEDVTSRLRGHVKSTHHPHRNHDGEDGPPAG
>NZ_CP045643.1|WP_153288010.1|2481031_2482669_+|DNA-alkylation-response-protein
MAASTHTVTNQAPPLVGYDVFAADRALVEAVERHLDPRLLDEARDELTTLGRTTGSAQVQEWGVLANENPPKLRTHDRYGNRVDEVEFHPSWHRLLGKGVSAGLTAAWSRPGGHLRRAAGFIVWTQAEAGHGCPLSMTHAAVPALRTDPALAAEWEPRLTSTVYDQGLRPAAQKAGVLFGMGMTEKQGGSDVRANTTEARPLAEDGTYELTGHKWFCSAPMSDGFLVLAQAPGGLTCFLVPRVLADGTRNVFRIQRLKDKLGNRSNASGEIEFDGTWARRVGDEGRGVRTIIEMVSATRLDCVLGAASLMRQAVAQAVHHSAHREAFGGKLIDKPLMRNVLADLALESEAATTLAMRLAAAYDDGGGEEERAFLRLAVPAAKYWVTKRCTPVAVEALECLGGNGYVEESGMPRLLRESPLNSIWEGAGNVQALDLLRALQREPQALNAFLREVGLARGADHRLDGAIKNLLTELADLDGIEARARRLAERIALVLQGSLLVRYAPPEVADAFCASRLGGDWGSAFGTLPHSLDLATVVERARPVS
>NZ_CP045643.1|WP_153292850.1|2482982_2484353_+|GAF-domain-containing-protein
MDVTRLAALDAAQAARVLGEVREATLAGHPARIAPRPVIGQSWERMLRDGVDPDHDVRSGLLVRDEVERRRQTSRLRHVLPVLREGLLSVADAAHHIVVVADQEGRVLWREGCASVLRKADGFGLDLGADWRENVVGTNGVGTPLVTRQPVQVFSAEHFVRTHHSWTCAGAPVTDPRDGSLLGVVDVSGPLDTLHPATLALVGSVAQLAEARLRELHLTSLERLRAVAAPVLARLGGRAVAVDRDGWTAAVTGMPYTNRLTLPKEPSTGRGWLPTLGTCVVEPLPGGWLVRAADEPAPRRPARIVLDLAHPRRWSVTVASDAGTWCQELTPRHAELLYLLATRPAGRSAAGLADDLFGDSGRTVTVRAEMSRVRRYLGAFLEHRPYRFCDDTEVELALPDDPRDLLAHSTAPAVRRARVAGPPCTAPGAAVSPVNHKERISGPSSGVLDQVRRSLP
>NZ_CP045643.1|WP_153288011.1|2484434_2485811_+|hypothetical-protein
MKHRGRHRRQRRGQALRATLAGTALALTAAATLISTSQATGSNSPGALTPLGSAAAAGGFRLHENLVAEDTLATLTKNMGGNVGVSGVLADTDHVMRDRAGCSGAERAALPLEPVATRAYCWAGDDARTRQWRPASVTTSGDADDDGRWGAQRVILAGWTHDDRAAGATAGDRGLARIAVIDASDPRALTYRWVLLVAPRDGGSDFDAVRSRMSGMVWYQGKLIVTGRNGAGRDDALLVFDLHHILKAGVNSGAVGRVGSGYSAHGYQYVLPAVGSYSPAGDTCGSATGTVPCFGSLSLDRTSTPDSLVATEASGTGGGERTRIWRYSYSSVAGREGLLRSDSVGRVDADEAYTTKATGLSGVLSHTPAGTRRADWYVGHTPDSGGRHGTLWRQSGNGAEAVRCSGDQSYACWGQHTASLSYWQETGELWTLSGAGTDTTPERTLYSVPLTSVDGSLG
>NZ_CP045643.1|WP_153288012.1|2485917_2486490_+|GNAT-family-N-acetyltransferase
MSNVTVTTWSLEQTAPADLLPAVAPDGDVRIVRAGVPSPEFSRFLYASVGADVRWTDRLGWTYAQWERFLDRPGVETWVAYDRGTPAGYVELEPQDDGVVEIVYFGLIPAFRGRRIGGHLLSYGVARAWDLAERVPGRAETKRVWLHTCSQDGEHAMDNYLRRGFRLFDTKVEEEPDVTAPGPWPGARTL
>NZ_CP045643.1|WP_153288013.1|2486858_2488553_+|nitrite/sulfite-reductase
MAATPQNPDAAPRRKVSRHRGEGQWAVGHFTPLNGNEQFKKDDDGLNVRTRIETIYSKRGFDSIDPNDLRGRMRWWGLYTQRKPGIDGGKTAILEPEELDDKYFMLRVRIDGGRLTTDQLRVIGEISQEFARGTADLTDRQNVQYHWIRIEDVPEIWNRLEAVGLSTTEACGDTPRVILGSPVAGIAEDEIIDGTPAVDEIQRRIIGNKDFSNLPRKFKSAISGSPLLDVAHEINDVAFVGVNHPEHGPGFDLWVGGGLSTNPKIGQRLGAWVPLDEVPDVYEGVISIFRDYGYRRLRTRARLKFLLADWGVEKFRQILEDEYLERKLVDGPAPEQPVARWRDHVGVHRQKDGNFYVGFAPRVGRVDGTTLTKIAELAGAHGSGRLRTTVEQKMIVLDVEESRVDSLVEGLEALDLTVRPSPFRRGTMACTGIEYCKLAIVETKARGASLIDELERRLPEFEEPITINVNGCPNACARIQVADIGLKGQLVLDDQGQQVEGFQVHLGGALGLEAGFGRKVRGLKVTSDELPDYVERVLKRFQAERADGERFATWALRASEEALS
>NZ_CP045643.1|WP_153288014.1|2488611_2488818_+|hypothetical-protein
MSERAAPFYCPYCGDEDLRPSEQGHGAWECAACNRAFQLKFLGLLAQGVHRTPRNGNVRPDEGGGDEI
>NZ_CP045643.1|WP_153288015.1|2488814_2489534_+|phosphoadenylyl-sulfate-reductase
MTAIQQDRTTRDLKSVAEQAGRDLEDASALEILRWAVDTFGGKFCVTSSMEDAVVAHLASRARPDGGRVDVVFLDTGYHFPETIGTRDAVEAVMDVDVITLTPRQTVAEQDAEYGPALHDRDPDLCCALRKVKPLEEGLTAYDAWATGLRRDESPTRADTPVVGWDEKRRKVKIAPIARWTQDDVDAYVAEYGVLTNPLLTDGYASVGCAPCTRRVLAGEDARAGRWAGRSKTECGLHG
>NZ_CP045643.1|WP_153288016.1|2489536_2490103_+|adenylyl-sulfate-kinase
MTGIAENQENQVTGATIWLTGLPSAGKTTIAYELAGRLREEGHRVEVLDGDEIREFLSSGLGFSRADRDTNVRRIGFLAELLSRNGVKALVPVIAPYADSREAVRKRHGASGTAYLEVHVATPVEVCSVRDVKGLYAKQAAGEISGLTGVDDPYEEPESPDLRLESHTQSVQESAAALHALLTERGLA
>NZ_CP045643.1|WP_153288017.1|2490099_2491050_+|sulfate-adenylyltransferase-subunit-CysD
MTTAATVSEATGGSGDAGPYALSHLDALESEAVHIFREVAGEFERPVVLFSGGKDSIVMLHLALKAFAPAAVPFSLLHVDTGHNFPEVLEYRDRTVAAHGLRLHVASVQDYIDRGVLKERPDGTRNPLQTVPLTEKIQSERFDAVFGGGRRDEEKARAKERVFSLRDEFSQWDPRRQRPELWQLYNGRHAPGEHVRVFPLSNWTELDVWQYIAREHIELPGIYFAHEREVFRRAGMWLTAGEWGGPKASETVEKRRIRYRTVGDMSCTGAVDSDATTLDAVIAEIAASRLTERGATRADDKMSEAAMEDRKREGYF

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Crispr_ID: NZ_CP045643_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_6

3126877-3126977

Orphan

Consensus_repeat	Method
GTGGGGGCTGGGCGCGCCGTTCCCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_6

>merge|NZ_CP045643|6|3126877-3126977|CRISPRCasFinder
GTGGGGGCTGGGCGCGCCGTTCCCCGCGCCCCTCACCGGGGTGCCACCGCCGCCGGGATCAAGCTGCGGGCCCGTGGGGGCTCGGCGCGCCGTTCCCCGCG

>NZ_CP045643|6|6|3126877-3126977|CRISPRCasFinder
GTGGGGGCTGGGCGCGCCGTTCCCCGCG	CCCCTCACCGGGGTGCCACCGCCGCCGGGATCAAGCTGCGGGCCC
GTGGGGGCTCGGCGCGCCGTTCCCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153288463.1\|3122220_3122787_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP045643.1\|WP_153288468.1\|3129542_3131738_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP045643.1\|WP_153288471.1\|3133582_3134122_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|367590
NZ_CP045643.1\|WP_153288470.1\|3132876_3133575_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181298
NZ_CP045643.1\|WP_153288475.1\|3136748_3137576_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376556
NZ_CP045643.1\|WP_153288466.1\|3124773_3126279_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP045643.1\|WP_153288464.1\|3123000_3124518_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP045643.1\|WP_010984178.1\|3126284_3126581_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP045643.1\|WP_153288473.1\|3134576_3135371_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378924
NZ_CP045643.1\|WP_153288462.1\|3121484_3122123_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288467.1\|3127043_3129281_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP045643.1\|WP_153288465.1\|3124534_3124777_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288459.1\|3117563_3117782_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288474.1\|3135532_3136660_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP045643.1\|WP_153288472.1\|3134172_3134496_+\|DUF427-domain-containing-protein	unknown	unknown	gnl\|CDD\|377265
NZ_CP045643.1\|WP_153288469.1\|3131753_3132761_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|239426
NZ_CP045643.1\|WP_153288476.1\|3137779_3138949_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|224029
NZ_CP045643.1\|WP_153288460.1\|3117820_3120982_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274846
NZ_CP045643.1\|WP_153288458.1\|3116344_3117553_+\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP045643.1\|WP_153288461.1\|3121112_3121310_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153288463.1\|3122220_3122787_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	5.04969e-22
NZ_CP045643.1\|WP_153288470.1\|3132876_3133575_-\|SDR-family-oxidoreductase	gnl\|CDD\|181298	PRK08219, PRK08219, SDR family oxidoreductase.	4.64692e-115
NZ_CP045643.1\|WP_153288471.1\|3133582_3134122_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|367590	pfam03641, Lysine_decarbox, Possible lysine decarboxylase. The members of this family share a highly conserved motif PGGXGTXXE that is probably functionally important. This family includes proteins annotated as lysine decarboxylases, although the evidence for this is not clear.	7.8553e-42
NZ_CP045643.1\|WP_153288475.1\|3136748_3137576_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	7.26662e-36
NZ_CP045643.1\|WP_153288466.1\|3124773_3126279_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP045643.1\|WP_153288464.1\|3123000_3124518_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP045643.1\|WP_010984178.1\|3126284_3126581_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	3.09196e-37
NZ_CP045643.1\|WP_153288458.1\|3116344_3117553_+\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	5.63976e-88
NZ_CP045643.1\|WP_153288473.1\|3134576_3135371_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	2.45502e-09
NZ_CP045643.1\|WP_153288467.1\|3127043_3129281_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.32571e-103
NZ_CP045643.1\|WP_153288468.1\|3129542_3131738_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP045643.1\|WP_153288474.1\|3135532_3136660_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP045643.1\|WP_153288472.1\|3134172_3134496_+\|DUF427-domain-containing-protein	gnl\|CDD\|377265	pfam04248, NTP_transf_9, Domain of unknown function (DUF427). This domain contains a beta-tent fold.	2.69779e-46
NZ_CP045643.1\|WP_153288476.1\|3137779_3138949_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	5.60474e-165
NZ_CP045643.1\|WP_153288460.1\|3117820_3120982_-\|AAA-family-ATPase	gnl\|CDD\|274846	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein. This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein. [Cellular processes, Toxin production and resistance].	1.66854e-33
NZ_CP045643.1\|WP_153288469.1\|3131753_3132761_-\|methionine-synthase	gnl\|CDD\|239426	cd03310, CIMS_like, CIMS - Cobalamine-independent methonine synthase, or MetE. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers both the N-and C-terminal barrel, and some single-barrel sequences, mostly from Archaea. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Side chains from both barrels contribute to the binding of the folate substrate.	2.97688e-75

>NZ_CP045643.1|WP_010984178.1|3126284_3126581_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPGITREEVAHLARLARLELKAEELDHFAGQLDDIIGAVARVSEVADQDVPPTSHPLPLTNVMRADEVRPSLTPEQALSGAPAQEQQRFKVPQILGED
>NZ_CP045643.1|WP_153288466.1|3124773_3126279_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTDTNVNIIRLTAAEIAARIAAGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDAKRERGEKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATVTKRLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLSRVPGGSGGGSSAALASFEAPLAIGTDTGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTSIDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQAGVVQRFDEAVALLKDLGAEIVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRVGDDGTRSAEEVTSLTREAGFGDEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFEKSFEQVDVIVSPTTPTTAFPIGERADDPMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPAMKDDRLYKVGAAVEAAFVEKWGHPLIEEAPSL
>NZ_CP045643.1|WP_153288465.1|3124534_3124777_-|hypothetical-protein
MSKALTKAKGFKKSKSGTYLSIATTAFGALGVAKQAKKARTEHDTLRLIDAAVSAAAIVTGLAILYRELKRLGDDDVLLG
>NZ_CP045643.1|WP_153288464.1|3123000_3124518_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MTTTTDELVSYEDALATYDPVMGLEVHVELGTKTKMFCGCSTELGAEPNSQTCPTCLGMPGSLPVVNATGVESAIKIGLALHCEIAEWCRFARKNYFYPDMPKNFQTSQYDEPIAFNGYLDVQLEDGEVFRVEIERAHMEEDTGKSLHVGGATGRIHGASHSLLDYNRAGIPLIEIVTKPIEGAGERAPEVAKAYVAELRELIKALGVSEARMEQGQMRCDVNLSLRPHGREKFGTRSETKNVNSLRSVERAARFEIQRHAAVLNSGGTIIQETRHFHEDTGSTTSGRVKEEAEDYRYFPEPDLVPVAPSRDWVEELRGGLPEQPLARRNRLREEWGVSAHDMQSILNAGAIDAIVATIEAGADATSARKWWMGELARSANESGKSLEDLPITPAQVARVTQLVASGDLNDKLARQVIEGVLAGEGAPDEVVEKRGLKVVSDEGALTAAVDEAIAGNPGIADKIRGGKVQAVGALVGAVMKATRGQADAARVKELILEKLGVSEG
>NZ_CP045643.1|WP_153288463.1|3122220_3122787_-|GNAT-family-N-acetyltransferase
MYAISLGDDGAELRPLEPWHAEEFLAHLERGREFIGQYIPFGSGATDVASAREVLQRYADHRAADTGSLHGLWLEGRLVGGVLFLNFDAAQGNCEVGCWLEPAGTGRGLVTRAMRLLIDWAVEKRGIHRVEWIAASANEPSVNGARRLGMTRDAVLRESFPYRGVRHDMEVWSVLAPDWRAARARTND
>NZ_CP045643.1|WP_153288462.1|3121484_3122123_-|hypothetical-protein
MGTKTVDEAVDANGTEAKSDKETAEVTGTEETPDSAAVTGTQAETEARAETETEAAAEEQDDDAEADAPADEDVPAAGEKSAPGVGQGAAAVVSAALGIVSLTGSWVATVAAARETLVGQLQTSSSASVATQVKEVYGDAWATTALVGGLFALAALIVGVVVLARPAFGTPGKPQAPWIKSVAWAGVSLGVVGLVLAVAKYSDILLGLPSTK
>NZ_CP045643.1|WP_153288461.1|3121112_3121310_-|hypothetical-protein
MFEYELHQIRSAELIREAQSHRLVREALRGRRSDRRTTARESGPNDTEGQAHSPRPRRHRFARAA
>NZ_CP045643.1|WP_153288460.1|3117820_3120982_-|AAA-family-ATPase
MTASPITSDAASDRCAMLGPVETRSVSPVFVGRADELGVLREALARAAGGSDAQASDTGGEPQALLLGGEAGVGKTRLIEEFATVADREGAVFACGGCVEIGADGLPFAPFSTALRALRRLLPDELAAAAAGQEDELARLLPELGATDRGRRPDEEGMARLFELTARLLERVAADRTVVVALEDLHWADASTRHLLAYLFRTLRSGRLVVVATYRADDIHRRHPLRPLLAELDRLRTVRRIELGRFTRAEVGRQIAGILAHEPDPAQVDDIFERSDGNAFFVEELAVAAHQGCRTGLTDSLRDLLLVRVEGLPESAQRIARIVAEGGSAVEYRLLAAVARLAEDDLIEALRAAVGANILLASPGGDGYRFRHSLVREAVSDDLLPGERSRFSRRYAEALEADPALVPADERATRLASYWYHAHDAAKALPAVLDASVEARCRHAHSEQLRLLERAMELWEVAPEAVRAALRPIDYVEVFPPCGHDPAAQGHPASPDLPAPLRYLDLMAEAAVAGRLSGERERALKITKRALHVLEDGSDPLRAAWFWVQRSRLVTAQARGDGWHELATARDLVRGLPPSQVHAEVLSLVAAWCMLHEPGPGALFAAERAVEYARMVGARDIELNARLTLGGLMVDAGDIEAGITEMYEVKEQVPPHGASLVAGRLHINLPSHLESVGRSRDAVPILRQGTELARKNGLLDTEAWVWGNLAESLCSLGRWDEAVEAARNALGVGVSGKPSGFGATRLADLALDRGDLPEAARQLDAARAHFGTHDPMPQHALPLVRSTIRIAAGEGRLLDARTALEQALDAGFPPGTQRYGWPLLLAAAVAEADARGLPAAEAGRDKTVRGLREAARTLATGAPVWHAHDRWVRAELRRAEGVSDPHEWAEVVSAFECLERPFDLARVRHRLADSLLAAGADEENRARATELLRLARAAAEHLGARPLADAVALLAQRARLALGKAPGPCAPGPVDPAQALGLTSRERDVLRLVAAGRSNRQIAEELFISPKTASVHVSNILAKLDVSGRGEAAALAHRLRLFPQETPTARTAG
>NZ_CP045643.1|WP_153288459.1|3117563_3117782_-|hypothetical-protein
MFNMFEEIFAPGRKHTDDERKRLELTRVDLNDGDPGRGPIDLSSGKVVVRPPERERDGPDPAREPESEPDGP
>NZ_CP045643.1|WP_153288458.1|3116344_3117553_+|PQQ-dependent-sugar-dehydrogenase
MNSRTATSKGPLIVQRRVVKAALAAAALVVTAGCSSGGSGGGPPGDGLAPSSSGPVTGSASAGRSTETAAPARGSVKVVRTVTEGLKSPWGLAPLPEGGLLVSSRDEGTITRVDEKTGRTTELGQVPGVAPAGEGGLLGIALSPAYASDHMVYAYFTTASDNRIVRMLYDAKKPPGEQLGAPDTIFKGIPKGMIHNGGRIAFGPDGMLYAGAGETGTRGLAQDKKALGGKILRMTPDGDPAPGNPFVGSVVYSYGHRNVQGLAWDDRQRLWASEFGQDTWDELNQIKPGDNYGWPVVEGRSDDPKYHNPVAQWHTDDASPSGIAYAEGSLWMAGLKGERLWRVPLEGTRAAAAPQSFLKGRYGRLRTVVPAGGNKLWLVTSETDGRGSPGKGDDRILELEVK
>NZ_CP045643.1|WP_153288467.1|3127043_3129281_-|EAL-domain-containing-protein
MEPTESAAPDVRLRLRRTTGAWMAGLRTGRSSTRPGAGERDHAPFTATGATASRYTAGRGPGLPGHDPERPTAWPALPAAVVALAALVLGAGFYRAFSDHHALFPSGAVGWSLAVLTGVIVGHLVALGRARWWGGTGSGAALTLAVLLLYGWVAAGMVSLTVVVLVGAARRGRWRQGVLHGAADILGIGAGALVLAVFGRVPSVEAPWNPQSWDFYAAPQVVLVATAYLAVTRVLLWHLHAPGTGGLPTAARTALVRQGLLAVALLGIAPLICVVAVAQPMLLPLFSIPLIALDSTLWIARIRAEEQLRDPLTGLPNRQWLLERTWAALDDAERIGARSALMLIDLDRFRSVNDTLGHLAGDRLLLQIAERLRLALPRGAEAARLGGDEFAVLLPVADSTTSATRVARNLVTALGSPLDLDGLTLVLEASAGLAVFPDHALDAEGLLRRADVAMYQAKRDRTGVEVYESKRDSNTPDRLGLLGDLRRALDAGDVELHYQPKVRFDGQVAGLEALVRWVHPERGRVAPDEFIAIAESSGLMPHLTEYVLETALAQVARWRAQGLRVPVAVNVSPRDVHTPGFAGAVAARLARHGVPAGALQLEITEHVLLEDPQRAADTLAGLTGHGVKMSLDDFGTGYSSLVHLRRLPVSELKIDRSFVARLAIDNEDAEIVRCTVDLAHSLGLLVVAEGVEDDETWERLRDLGCDAVQGWLVAAAMPPDEATAWLLARGSRGWQRPRAALPAAD
>NZ_CP045643.1|WP_153288468.1|3129542_3131738_-|NAD-dependent-DNA-ligase-LigA
MAGDMDAQPNPLPAEARERHALLAEQIEEHRFRYYVKDQPVVSDTEFDKLLRSLEALEERYPELRTPDSPTQKVAGAYETGFTSVRHRERMLSLDNAFSDLELAAWAERVAKDVGASAYHFLCELKVDGLAVNLTYEQGRLTRAATRGDGRTGEDITPNVRTITEIPDRLRGDGFPDLVEIRGEVYFPMEKFAELNARLLEAGDKPFANPRNAAAGSLRQKDPRVTASRPLHMVVHGIGALEGFEGLTRLSGAYELLHSWGLPTTRYAKVVDDLDGVREFIANYGENRHSVEHEIDGVVVKLDEIRLQGRLGSTARAPRWAIAWKYAPEEVNTKLVDIKVGVGRTGRVTPYAQVEPVTVAGSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGTEREFVMPAECPECGTPLRAMKEGDIDLRCPNGRGCPAQLRERVAYLAGRECLDIEHFGNVAAAALTRPLEPAAPPLVDEGDLFDLTAEQLLPIKAYVLDQDSGLPKRDPRTGEEKVVTVFANQKGEPKKNTLALLDNIAEAKNRPLARFINGLSIRHVGPVAAEALAREFRSVDRIEQATEEELAAVDGVGGIIATSVKEWFAEDWHREIIRKWRTAGVRMEDEGSGEDEGPRPLEGLTVVVTGTLEHHTRDGAKDALQSQGAKVTGSVSKKTSFVVVGENPGSKYDKAMQLKVPVLNEDGFAVLLGQGPEAAAEVALPTEE
>NZ_CP045643.1|WP_153288469.1|3131753_3132761_-|methionine-synthase
MSENSEFGFGAATGVGSMPGGDVRETAKTVTGSFDDFPHLPELPARGPGADMIGRTAGMLVDLYARVEPSGWRIGDRPGRDTRRARSWLGEDLDALEEYTQGYEGPLKVQAVGPWTLATALELRNGEAALSDPGASRDLAGSLAEGLRVHLDEVRRRVPGARVVLQLDEPSLIAVLRGQVKSASGYRTHRAVDRQLVESTLRDVVGVHADGPVVVHSCAPDVPFELLRRAGAAGISFDLTLLTERDDDAIGEAVEGGTRLLAGVVPGTDGPLSDPAGSVMGVRTLWRRLGLRPELLARAVTVTPSCGLAGASPEYARRALAHCVRAARSLADNPE
>NZ_CP045643.1|WP_153288470.1|3132876_3133575_-|SDR-family-oxidoreductase
MASMATHLITGAGSGIGAAVARRLHARGDELVLHARDAGRAKELGAAYPGAKTLVGDLADPDKLSWAFSHQSLPDRVDSLLHIAGVVDLGRVGELTPKSWRHQLNVNLIAPAELTRHFLPQLRLAQGHVLFVNSGAGLSAGADWSAYAASKHGLKALADSLRHEEHGNGVRVTSVYPGRTASPMQAKVHQQEGKPYDASKWIDPESVATTILTALDLPRDAEVNDLTVRPGR
>NZ_CP045643.1|WP_153288471.1|3133582_3134122_-|TIGR00730-family-Rossman-fold-protein
MNICVFLSAADLDDRYTGPARQFAELLGKGGHTLVWGGSDVGLMKVVADGVQEAGGRLVGVSVDFLAARARTGADEMVIARDLAERKALLLEKADAVVVMVGGTGTLDEATEILELKKHGRTDKPVVLLNTAGFYDGLKEQFRRMEAEGFLPRPLIDLVFFAEEPAGALAYLEENAGTR
>NZ_CP045643.1|WP_153288472.1|3134172_3134496_+|DUF427-domain-containing-protein
MTQGHTITIEQGTQRVRVVHGDQVLAESDRPLLLRETGCPVRYYIPPQDVRLDLLTASDTHTHCPFKGDASYWSLPDAPDLVWFYPEPKPDVAQIKDHLCFYEVEVL
>NZ_CP045643.1|WP_153288473.1|3134576_3135371_+|alpha/beta-fold-hydrolase
MDNKVLSRDGTPLAYERHGDGPAVVLVGGALCTGATLAPLARALSDRFGAVTYDRRGRGASGDTVSSCTVAREVEDIAALIRACGGTASLYGMSSGGALALRAAASGLPVDAVAVYETPFALHEGRGEERREYTGRLTELLARGRHGDALELFMALTGMPPEMIAGARRSPGWAGMEAIAPTLAYDDAVMGDGLLPRELPASLPMPVLSVAGGASPEWMREAARAVADAAPEGTYRVLERQTHNVDAAALAPLLEEFFGNGGTG
>NZ_CP045643.1|WP_153288474.1|3135532_3136660_-|tRNA-2-thiouridine(34)-synthase-MnmA
MTETSPRPRPLRVLAAMSGGVDSAVAAARAAEAGHDVTGVHLALSANPQSFRTGARGCCTIEDSRDARRAADVIGIPFYVWDLAERFREDVVEDFVAEYEAGRTPNPCLRCNEKIKFAALLDKALALGFDAVCTGHYAKVLVNEDGTRELHRASDMAKDQSYVLGVLDDRQLAHALFPLGDTLTTKDEIRAEAERRGLAVAKKPDSHDICFIADGDTQGFLANRLGRAEGDIVDESGAVVGTHEGAFGFTIGQRKGLRIGTPAADGKPRYVLDISPVDNTVTVGPAASLDVSALTAVKPRWCGAAPAGTGTYTAQLRAHGGETTVTAELVDGGLEVAFTEPVRGVAPGQAIVLYDGTRVVGSATIATTTRATASV
>NZ_CP045643.1|WP_153288475.1|3136748_3137576_+|N-acetylmuramoyl-L-alanine-amidase
MSGAAQEAPETRETPDPAAPDPGSPHPAAPGRDVPAPGTPEGKRRVGTDGDRRVGRRTLLIGGLAAAVGTGVLARAELGHVWWRLPGVEKPREEGVVDFRGARWVAASSANWRRADRPDDYAIDRVVIHVTQGSYRSAVKVFQDPGHGAAAHYIVRKDGGITQMIRELDVAFHAGNRGYNERSVGIEHEGFVEHASSFTDAMYRASARLTAGICARYGIPVDREHIIGHVEVPGTDHTDPGRYWDWDRYLLLVRRAGTAADPTGAGATPAGAAGT
>NZ_CP045643.1|WP_153288476.1|3137779_3138949_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MAYLDHAATTPMLPEAVEALTAHLSVTGNASSLHAAGRRARRTVEEARESLADALGARPSEVVLTSGGTEADNLAVKGLYWARRDADPARTRVLASPVEHHAVLDAVDWLGEHEGATVEYLPVDPYGRVHPDALREAIARNPDDVALATVMWANNEIGTVLPIRELADVAAEFGVPLHSDAVQAFGQLPVDFASSGLAAMTVSAHKIGGPYGIGALLLGREYTPVPVLHGGGQERHVRSGTLDVPAVASFAVAGRLATEQRAWFAREIGALRDDLVEAVRAAVPDALLGGDPDPAGRLPANAHFTFPGCEGDSLLLLLDAQGIECSTGSACTAGVAQPSHVLLATGTDPDLARGTLRFSLGHTSTEADVEAVAKAIGPAVDRARTAGLT

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Crispr_ID: NZ_CP045643_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_7

3586299-3586420

Orphan

Consensus_repeat	Method
ACGGACAGCGGGTCGGCCGGGCAGCCGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP045643_7

>merge|NZ_CP045643|7|3586299-3586420|CRISPRCasFinder
TCCGTCCGCCGGTCCGACGGACAGCGGGTCGGCCGGGCAGCCGGTCTACGAGCAGCGGGTCGGCGGGTCTGACGGGCAGCCGATCAACGGGCAGCGGGTCGGCCGGGCAGCCGGGCAGCCGG

>NZ_CP045643|7|7|3586299-3586420|CRISPRCasFinder
TCCGTCCGCCGGTCCGACGGACAGCGGG	TCGGCCGGGCAGCCGGTCT
ACGAGCAGCGGGTCGGCGGGTCTGACGG	GCAGCCGATCAACGGGCAG
CGGGTCGGCCGGGCAGCCGGGCAGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153288797.1\|3578019_3580149_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|366030
NZ_CP045643.1\|WP_153288812.1\|3599356_3601300_+\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|236101
NZ_CP045643.1\|WP_153288805.1\|3588814_3589753_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224094
NZ_CP045643.1\|WP_153288799.1\|3581396_3582407_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP045643.1\|WP_153288804.1\|3587741_3588803_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP045643.1\|WP_153288800.1\|3582412_3583396_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224094
NZ_CP045643.1\|WP_153288801.1\|3583388_3584312_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223674
NZ_CP045643.1\|WP_153288796.1\|3577648_3577843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288808.1\|3593237_3595145_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|273597
NZ_CP045643.1\|WP_153288798.1\|3580318_3581404_-\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP045643.1\|WP_153288807.1\|3590822_3592445_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP045643.1\|WP_153288806.1\|3589745_3590672_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223674
NZ_CP045643.1\|WP_153288810.1\|3598228_3598516_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288802.1\|3584374_3586012_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP045643.1\|WP_153288811.1\|3598535_3599357_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288803.1\|3586600_3587749_-\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP045643.1\|WP_153288793.1\|3575906_3576353_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP045643.1\|WP_153288795.1\|3577380_3577590_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP045643.1\|WP_153288809.1\|3595372_3597628_-\|ABC-transporter-family-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173866
NZ_CP045643.1\|WP_153288794.1\|3576508_3577384_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153288797.1\|3578019_3580149_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|366030	pfam00326, Peptidase_S9, Prolyl oligopeptidase family.	5.67214e-45
NZ_CP045643.1\|WP_153288812.1\|3599356_3601300_+\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|236101	PRK07803, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP045643.1\|WP_153288805.1\|3588814_3589753_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.54125e-81
NZ_CP045643.1\|WP_153288799.1\|3581396_3582407_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.13688e-180
NZ_CP045643.1\|WP_153288804.1\|3587741_3588803_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.91096e-180
NZ_CP045643.1\|WP_153288800.1\|3582412_3583396_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.74779e-86
NZ_CP045643.1\|WP_153288801.1\|3583388_3584312_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.47952e-107
NZ_CP045643.1\|WP_153288808.1\|3593237_3595145_-\|translational-GTPase-TypA	gnl\|CDD\|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
NZ_CP045643.1\|WP_153288798.1\|3580318_3581404_-\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	2.27094e-153
NZ_CP045643.1\|WP_153288807.1\|3590822_3592445_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	3.31887e-121
NZ_CP045643.1\|WP_153288806.1\|3589745_3590672_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	8.02539e-111
NZ_CP045643.1\|WP_153288802.1\|3584374_3586012_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	9.12326e-115
NZ_CP045643.1\|WP_153288803.1\|3586600_3587749_-\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	5.05822e-157
NZ_CP045643.1\|WP_153288793.1\|3575906_3576353_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.34439e-14
NZ_CP045643.1\|WP_153288795.1\|3577380_3577590_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	8.94807e-20
NZ_CP045643.1\|WP_153288809.1\|3595372_3597628_-\|ABC-transporter-family-substrate-binding-protein	gnl\|CDD\|173866	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold. LpqW is one of key players in synthesis and transport of the unique components of the mycobacterial cell wall which is a complex structure rich in two related lipoglycans, the phosphatidylinositol mannosides (PIMs) and lipoarabinomannans (LAMs). Lpqw is a highly conserved lipoprotein that transport intermediates from a pathway for mature PIMs production into a pathway for LAMs biosynthesis, thus controlling the relative abundance of these two essential components of cell wall. LpqW is thought to have been adapted by the cell-wall biosynthesis machinery of mycobacteria and other closely related pathogens, evolving to play an important role in PIMs/LAMs biosynthesis. Most of periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the LpqW protein. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	6.67233e-64
NZ_CP045643.1\|WP_153288794.1\|3576508_3577384_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	2.81697e-07

>NZ_CP045643.1|WP_153288802.1|3584374_3586012_-|ABC-transporter-substrate-binding-protein
MRGATHAKWAAGAAAIALAATGCGSGGGGGGGGGGSGSGVVSSSWGDPQNPLEPANTNEVQGGKVLDMIFRGLKRYDAKTGAAQDMLAQKIDTSDSQNFTITVKSGWKFSNGEAVTARSFVDAWNYGASLKNNQKNAYFFGYIDGYDKVHPDTGSQSADKLSGLKVTGTDTFTVKLNQKFSTFPDTLGYVAYAPLPKAFFDDHAAWLKKPVGNGPYSVSSYSKGSLMSLRKWDGYSGTDKAQNDGVDLKVYTDNNTAYTDLLAGNLDLVDDVPASQLKNVKTDLGGRYINTPAGIIQTLAFPFYDKNWDKSGSEKVRKGLSMAIDRAQITDTIFQKTRTPASDWTSPVLGKDGGFQDGLCGGSCTYNPTEAKKLIQEGGGLPGGQLKISYNADTGSHKEWVDAVCHSVNNALGNDKACVGNPIGTFADFRNQITQHKMSGPFRAGWQMDYPLIQNFLQPLYYTNASSNDGKWSNKDFDKLVDRANAETDRAKAVSLFQQAEGVVRDNMAAIPLWYQNGSAGYSDRVSNVALNQFSVPVYDEIKVS
>NZ_CP045643.1|WP_153288801.1|3583388_3584312_-|ABC-transporter-permease-subunit
MGRYVIRRLLQMIPVFIGATLLIFLMVNVMGDPIAGLCGERQCDPATAAQLRKEFGLDQPVWQQYLTYMGNVFTGDFGTAFNGQPVTELMGSAFPVTIRLTIVAILFEIVIGITLGVITGLRRGRPVDSGVLLLTLVVISVPTFVTGLLLQLLLGVQWGWIKPSVSPDAAFGELIVPGLVLASVSLAYVTRLTRTSIAENRRSDYVRTAVAKGLPRRRVITKHLLRNSLIPVVTFIGTDIGALMGGAIVTERIFNIHGVGYQLYQGIVRQNTQTVVGFVTVLVIVFLVANLLVDLLYAVLDPRIRYA
>NZ_CP045643.1|WP_153288800.1|3582412_3583396_-|ABC-transporter-permease-subunit
MPEQPPFDQQGAIAATGMGGAMDLAASEAETLEKTPGGPLGTGPQEKPRSLWSDAWRDLRRNPVFIVAGLVILFLVVISVWPSLIASQNPLKCDLAKAQQGSQPGHPFGFDGQGCDVYTRTVYGTRVSITVGVCATLGVAILGSVLGGLAGYFGGASDGILSRITDIFFAIPVVLGGLVLLSVVTSNTVWPVIGFMVLLGWPQISRIARGSVITTKQNDYVQAARALGASNSRMLLRHITPNAVAPVIVVATIALGTYISLEATLSYLGVGLKPPTVSWGIDISSASAYIRQAPHMLLWPAGALAITVLAFIMLGDAVRDALDPKLR
>NZ_CP045643.1|WP_153288799.1|3581396_3582407_-|ATP-binding-cassette-domain-containing-protein
MLLEVRDLHVEFRTRDGVAKAVNGVTYGVDEGETLAVLGESGSGKSVTAQAVMGILDMPPGRITGGEILFQGKDLLKFKEDERRKVRGAEMAMIFQDALSSLNPVLSVGDQLGEMFTVHRGMSRKDARAKAVELMDRVRIPAAAQRVRDYPHQFSGGMRQRIMIAMALALEPALIIADEPTTALDVTVQAQVMDLLAELQRELNMGLILITHDLGVVADVADRIAVMYAGRIVESAPVHDIYKAPAHPYTKGLLESIPRLDQKGHELYAIKGLPPNLMHIPPGCAFNPRCPMAQDICRTEVPPLAEVDEGGGERASACFFWRETLDAGTTGGGSRA
>NZ_CP045643.1|WP_153288798.1|3580318_3581404_-|dipeptide-ABC-transporter-ATP-binding-protein
MPEALLEVSGLVKHYPLTRGILFRKQIGAVRAVDGVDFHLGRGETLGIVGESGCGKSTVAKMLVNLERPTAGVIKYKGEDITRMSGRALKAVRRNIQMVFQDPYTSLNPRMTVGDIIGEPYEIHPEVAPKGDRRKRVQDLLDVVGLNPEYINRYPHQFSGGQRQRIGIARGLALRPEIIVADEPVSALDVSVQAQVINLMASLQDEFDLSYVFIAHDLSIVRHISDRVGVMYLGRIVETGRDAEIYDHPTHPYTQALLSAVPVPDPEAREHRERIILAGDVPSPANIPSGCRFRTRCWKAQERCALEVPLLAVPAVFRHTEGPAAHASACHFAEEKQVVPPEGSLDDSPPGAPDDPPSERA
>NZ_CP045643.1|WP_153288797.1|3578019_3580149_+|prolyl-oligopeptidase-family-serine-peptidase
MTTEPPSFPRRYARTQRFTLGAPRAFTVSPDGSRVVFLRSPSGTDRANQLWVLDVADGQERVAADPAALLGGAGEHLSAAERARRERSREGGAGVVGYATDNAVEVASFALSGRLFTAELRAGTARELRVPGPVIDPRPSPDGRLVAYVSKGALRVVGAEGEDDRALARRDPGTDPETVSYGMAEFIAAEEMDRSRGFWWSPESDRLLVARVDDAPVRRWWISDPAQPEHAPQQVAYPSAGTDNADVRLFVITLDGTRTEVAWNRAQYPYLAHVHWSAAGAPLILVQARDQRSQLFLAVDPETGKTRMVHADEDRQWLDLFHGVPCWSPTGQLVRIVDEGGARVLAFGERPLTGPQLHVRAVLDVSDDDVLVAASAGAAAASPETGEVHVYRVNELGVERLSQEPGVHSAVRSGRVTVLVSAVPGEPGTQVQVLREGKRAAIVTSYAEHPGMSPRVTLTEGGARKIPCALLMPTDYDGESPLPVLMDPYGGPHGPRVLAAHNAHLTSQWFADQGFAVIVADGRGTPGRSPAWEKAVRDDFTLTLDDQIDALHGLAERYPLDLSRVAIRGWSFGGWLAGLAVLRRPDVFHAGIAGAPVTDWRLYDTHYTERYLGDPATAGQAYAKSSLITEEGLSAPAEPHRPLMIVHGLADDNVVVAHALRLSSALLAAGRPHEVLPLSGVTHMTPQEQVAENLLLLQVDFLKRSLGMG
>NZ_CP045643.1|WP_153288796.1|3577648_3577843_-|hypothetical-protein
MALSISAVVLLAIIVFILVKKSGLKAGHAVVCVLFGFYLASSTIAPTISDLTTNVADMIGSFKF
>NZ_CP045643.1|WP_153288795.1|3577380_3577590_+|DUF397-domain-containing-protein
MIRNASSGDGSELKWFKSTYSDGPDGNSCVEIATTPNTVHVRDSKHADGPRLALTPDAWAGFVSYASRG
>NZ_CP045643.1|WP_153288794.1|3576508_3577384_+|helix-turn-helix-domain-containing-protein
MSVDTEAGRLRSEADEPGWEVDPDDDWGVAVVATVGRQLKLRREAAGMRAAEFGRAVGYGEDMVYKIEGGKRIPQPEFLDRADEVLGAGGLLSAMKEDVAKVRYPKKVRELAKMEAQAVELGAYVGLSLHGLLQTPTHARALFEAWQPAYAPEEAERMVAARMARKAIFERSPAPALCFVQEEATLRRPVGGTMVWRQQLEHLLEVGRLRNVTLQVMPTNADAHPGLSGKIEVLKFADGTAVGRSDGAYNGRPISDPKQLRILELRYGTIRAQALTPRESLAFIERVLGET
>NZ_CP045643.1|WP_153288793.1|3575906_3576353_-|ATP-binding-protein
MNQESAAPEVQTGTPIRDFSVLLSPTPRGARLARLLATEQLRAWGIALDRAPHIVAELAANAATHGRVPGRDFRLTLHVVGDTLRIELSDTRDDRLPRVLPGTAPDAECGRGLVLVDALAGRWGTAPGPPPRKTVWAELALPPEPGHS
>NZ_CP045643.1|WP_153288803.1|3586600_3587749_-|dipeptide-ABC-transporter-ATP-binding-protein
MADPTKSAEPTDATPNVSEVELADTHSVEEEIAALEAPVDRGEPILQVRNLVKHFPLTQGIVIKRQIGAVKAVDGVSFDLYQGETLGIVGESGCGKSTVAKLLMSLEQATAGEVFYKGQDITRLSGRALKAVRRNIQMIFQDPYTSLNPRMTVGDIIGEPFDIHPEVAPKGDRRGKVKELLDVVGLNPEYINRYPHQFSGGQRQRIGIARGLALNPEIIICDEPVSALDVSVQAQVINLMARLQDEFNLSYIFIAHDLSIVRHISDRVGVMYLGKMAEIGTDEQIYEHPTHPYTQALLSAVPVPDPEARERRERIILTGDVPSPANPPSGCSFRTRCWKAQDKCAEQVPLLAVPEVFKGLDTPAAHDSACHFAEQKDVVHAA
>NZ_CP045643.1|WP_153288804.1|3587741_3588803_-|ATP-binding-cassette-domain-containing-protein
MTDIDSKDAIPAPRSGDGGKTAPLLEVRDLHVEFQTREGVVRAVNGVNYSVNSGETLAVLGESGSGKSVTAQAIMGILDMPPARIPKGEIRFYGQDMLTMSNEERRKLRGARIAMIFQDALSSLNPVLSVGYQLGEMFRVHQGLSRKQAKAKAIELMDRVKIPGAAARVNDYPHQFSGGMRQRIMIAMALALEPDLIIADEPTTALDVTVQAQVMDLLAELQREYQMGLILITHDLGVVADVADKIAVMYAGRIVETAPVHELYKRPAHPYTSGLLDSIPRLDQKGQELYAIKGLPPNLLKVPSGCAFNPRCEHAQDICRTERPALVQVTERDGTELPGRASACHFWKETIHG
>NZ_CP045643.1|WP_153288805.1|3588814_3589753_-|ABC-transporter-permease-subunit
MSEKTIERPTTDEAALAKEIEAEEKVAARQASLLKDGWADLRKRPMFIVTGLVILCLLALAIAPSLFTSRSPFSDGFCQLQNSMSGPTSGHLFGFDVQGCDIYTRAVYGTRNSIVVGVVTTIATTLIGGLVGMLAGLIGGWADALLSRITEVFAGLPLLIGGLLIMSVWGGGDVWSVSFIMAILGWPQVFRIMRGEVIANKYNDYVMAARALGASSWRIAFRHILPNTLAPVIVITTMNLGVYIGAEAALSYLGIGIQYPNISWGVMISDAQDRFLTSPHALLFPAGALSITVLAFIMLGDVVRDAFDPKMR
>NZ_CP045643.1|WP_153288806.1|3589745_3590672_-|ABC-transporter-permease-subunit
MGRYVVRRLLQVIPVLIGVTFIIFCLVFALPGDPIQALAGDKRADPNIAAILRAHYHLNEPLYQQYWHYISGVFTGDLGETYNGRAISDIVSERFPVTLKLGLTSFAIEAVIGVLAGILSALKRGKFLDNVVLVATLVLISIPVFVFGSVLQLEFGMSLKLTPVAGIEKGWPQSYILPAIVLAATSMAYIARLVRSSMTESIRADYVRTAIAKGLPRRRVIGVHALRNSMIPVVTFLGFDLGALMGGAIITERVFNMPGLGGQLAQSLYLRERPVVVGLVTLLVLIYLVANLVVDLLYAVLDPRIRYE
>NZ_CP045643.1|WP_153288807.1|3590822_3592445_-|ABC-transporter-substrate-binding-protein
MRGAKSAKWVAIAAVVALGATACGGGGGDSSSGSGKGNGVVSVEIGEPQNSLVPSNTYETEGGQVINALFTGLTKLDASNKVVNAMAESIETKDNKVWTIKLKSGYTFHNGEKVTAQSFVDAWNYGANQTNAQQTNPLFSHIAGYSDLNPGEGKKPSTDKMSGLKAVDDSTLQVTLSGEFSAFPSQLSFTAFVPLPQAFFKDPKGFGEAPIGNGPFEMKGKFKHNELIATTKYDKYPDASKIEVKGVNFKIYSNQDTAYKDLVAGNLDSLLTIPTSGLPTYKKDLPNRTIDEADSAVGYIGFPIKYNKAFQNADLRKSISMAIDRQTIADKVFLGARTPADDYISPIIDGYRKGACGDACTLNVAKAKELYKKSGGLPGNKLELGYNADGGHKEWIEAVANQLQQNLGLKVTAKPFEQFQTILNDLDAKKYQGAFRMAWSMDYPDAEDYLRPVFSKDAIANGSNYSGYVNESFEKLLVKGDQAPTHEDAVKYYQQADDVLLKDMPYIPVYFYTLNAGFSDKIKSMKVAGHQILWDTVKLS
>NZ_CP045643.1|WP_153288808.1|3593237_3595145_-|translational-GTPase-TypA
MATRHDIRNVAIVAHVDHGKTTLVDAMLKQAGAFAAHAAESLDDRMMDSNDLEREKGITILAKNTAVKYHPKDGGEVITINIIDTPGHADFGGEVERGLSMVDAVVLLVDASEGPLPQTRFVLRKALQARLPVILCINKTDRPDSRIDEVVNEAYDLFLDLDADEDQIEFPIVYACARDGVASLTKPADGTVPADSDSLEPFFSTILQSVPAPSYDEDAPLQAHVTNLDADNFLGRIALLRVEQGELRKGQTVTWIKRDGTMSNVRITELLMTEALTRKPAEKAGPGDICAVAGIPDIMIGETLADTENPIALPLITVDEPAISMTIGTNTSPLVGRGGTGKGAENKAAVKDRKVTARQVKDRLDRELVGNVSLRVLDTERPDAWEVQGRGELALAILVEQMRREGFELTIGKPQVVTQEIDGKVHEPVERMTIDVPEEHMGAVTQLMGVRKGRMDNMSNHGSGWVRLEFVVPSRGLIGFRTEFLTGTRGTGIAHSIHEGHEPWFGPLSTRNNGSLVADRAGAVTAFAMTNLQERGVLFTDPGTEVYEGMIVGENSRSDDMDVNITKEKKLTNMRSASADSFEAIVPPRKLSLEQSLEFCRDDECVEVTPESVRIRKVNLDGRERARAASRAKNG
>NZ_CP045643.1|WP_153288809.1|3595372_3597628_-|ABC-transporter-family-substrate-binding-protein
MSHDGVGLRAVMRSVAFLTAGALAVPVLTACSADDEEKVSPVAAQDIAPAGRDQVTDGGTLRWAVDAVPATLNTFQADADTTTSRVAGAVLPSLYRLDRNGRPQLNPDYLESAKVVDEEPKQVVLYKLNQQAVWSDGREIGADDFAAQWRALSGKDSAYWTARNAGYDRIEKIERGKNNLEVRVTFSRPYADWKSLFSPLYPKDVMGAAATFNDGARSKLNVTAGPFALQSVDSKTGEIHLTRNPRWWGRPAKLAEIALVAVPRDQRATALAANRIDMADVDPEQANRITLAAGARGSAPLEGPSTPSTPGTTLSPAKALRSWAVAHGSDEAAARDEAGVREKLRQAAAQYASEQSSLSGFVVRKSLEPAYTQLALNGSEGPLADERVRRAVARALDRDELAQAVLKPLGLPAVPVGSHLALAGQQAYADNSGALGSHDAKEAQALLVDAGWVPGGPVKEEKKDKEKGKAAGSEGKKAAPGSEPESDDGSYIGDEDNKPAGIDRAKADPAGEAEEYRTTHSDEQTATRFDGKRYARHDTRQGGAPGAYAPKGTAAPAGAASGVLAKDGKPLTLRFVLPSGPGSESLNTVADHISRMLERIGIRTETTKVAGDSYFKDHIASGQYDLALYSWPASAFPATDARPIFAKPVPAADGSLTVEQNYTRVGTDQVDQLFDQAIGTLDESEERALVRKADARIWAAAGSIPLYQRPQLTAVRPNLANAGSFGFQTPLYEDMGFLKKGAKPSATPSTP
>NZ_CP045643.1|WP_153288810.1|3598228_3598516_+|hypothetical-protein
MSVHDELTSVQRCLDDLLRSMGRLEQQIGGGLDMRRVRADADHLRESVALLRESAPGLTKPPRPDLVSIPDTPYDNSLWTDSDDEGLGARDRHAP
>NZ_CP045643.1|WP_153288811.1|3598535_3599357_+|hypothetical-protein
MATGTEPHPNSGGVRTGTRAAIAAPHLRTDRWWLAPAATAAGLLAFIVYSTWRAFADTDYYAAPYVSPFYSPCLAERCRSMDGGPNADLFGSWWGISPAIIILVFPLGFRLTCYYYRKAYYRGFWASPPACAVAEPHKKYTGETRFPLILQNIHRYFFYAAILVAGTLTYDTVLSFRDEHHHWGHMGLGTLVFLLNITLIWAYTLSCHSCRHIVGGKLKHFSKHPVRYRMWQWVGKLNARHMLLAWASLVSVALADFYVFLVASGAFDDPRFF
>NZ_CP045643.1|WP_153288812.1|3599356_3601300_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MSVVDRQEWDVVVVGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMGNVNSGDNWQVHFRDTMRGGKFLNQWRMAELHATEAPDRVWELETWGALFDRTADGRISQRNFGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDKKETGDYESRLKVYQECTVTRVMKDGNDVSGVFCYERESGRFFVLDAPSVVIATGGIGKSFKVTSNSWEYTGDGHALALLAGAPLLNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSDGKRFMFDYIPDVFKEKYAQSEEEGDRWYEDPDHNRRPPELLPRDEVARAINSEVKAGRGSPHGGVFLDVSTRMPADVIRRRLPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVDSESAAARGVPGLFAAGEVAGGMHGSNRLGGNSLSDLLVFGRRAGLHAAEYAAGRAGDRPAVDDVQVDTAAAEALRPFSAEGPVPGEDNGRPPENPYTLHQELQQAMNDLVGIIRREAEMEQALEKLADLRVRARRAGVEGHRQFNPGWHLALDLRNMLLVSECVARAALERTESRGGHTREDHPAMERAWRRVNLLCRLTDPTGGLAATDPVRGQIDLTRENTEPIRPDLLALFEKEELVKYLAEEELYE

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Crispr_ID: NZ_CP045643_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_8

3763251-3763454

Orphan

Consensus_repeat	Method
GGCCGGCGTCCGGAGCCGCGTCC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP045643_8

>merge|NZ_CP045643|8|3763251-3763454|CRISPRCasFinder
GGTCCGGGTCCGGGCCGGCGTCCGGAGCCGCGTCCGGGACCCGGGTATAGGTCGGTGTCCGGGGCCTGGACCCGGGCAGAGGTCGGCGTCCGGAGCCGCGTCCCGTCGGGTCCGGGCCCCGGGTCAGCGTCCAGGGTCACGTCCGGGTCCCGTTGCGGGTCAGCATCCGGGCCCAGCTACAGGTCGGCGTCCGGGGCCAGGTCG

>NZ_CP045643|8|8|3763251-3763454|CRISPRCasFinder
GGTCCGGGTCCGGGCCGGCGTCC	GGAGCCGCGTCCGGGACCCGGGTATA
GGTCGGTGTCCGGGGCCTGGACC	CGGGCAGAGGTCGGCGTCCGGAGCCGCGTCCCGTCGG
GTCCGGGCCCCGGGTCAGCGTCC	AGGGTCACGTCCGGGTCCCGTTGCGGGTCAGCATCCGGGCCCAGCTACA
GGTCGGCGTCCGGGGCCAGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153288941.1\|3773946_3775383_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143429
NZ_CP045643.1\|WP_153288931.1\|3759686_3759815_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153288926.1\|3750880_3752062_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|128563
NZ_CP045643.1\|WP_153288936.1\|3767225_3768050_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
NZ_CP045643.1\|WP_054233631.1\|3766687_3767125_+\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|372719
NZ_CP045643.1\|WP_153288939.1\|3771560_3771779_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224042
NZ_CP045643.1\|WP_153288938.1\|3770237_3771461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227829
NZ_CP045643.1\|WP_153288929.1\|3757025_3758627_+\|methylmalonyl-CoA-carboxyltransferase	unknown	unknown	gnl\|CDD\|227136
NZ_CP045643.1\|WP_153288935.1\|3764000_3764963_-\|DeoR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP045643.1\|WP_153288934.1\|3761347_3763120_+\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP045643.1\|WP_153288930.1\|3758651_3758861_+\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP045643.1\|WP_153288940.1\|3771962_3772610_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|371225
NZ_CP045643.1\|WP_153288932.1\|3759856_3760477_+\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|178901
NZ_CP045643.1\|WP_153292932.1\|3753658_3754174_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP045643.1\|WP_153288927.1\|3752230_3753037_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181069
NZ_CP045643.1\|WP_153288937.1\|3768380_3770018_+\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP045643.1\|WP_153288928.1\|3756019_3756895_-\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP045643.1\|WP_153292933.1\|3765130_3766630_-\|NAD(P)H-quinone-dehydrogenase	unknown	unknown	gnl\|CDD\|236112
NZ_CP045643.1\|WP_153288933.1\|3760492_3760993_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292934.1\|3772945_3773941_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|188646

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153288941.1\|3773946_3775383_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143429	cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.	0
NZ_CP045643.1\|WP_153292933.1\|3765130_3766630_-\|NAD(P)H-quinone-dehydrogenase	gnl\|CDD\|236112	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed.	0
NZ_CP045643.1\|WP_153288926.1\|3750880_3752062_-\|diguanylate-cyclase	gnl\|CDD\|128563	smart00267, GGDEF, diguanylate cyclase. Diguanylate cyclase, present in a variety of bacteria.	2.13076e-39
NZ_CP045643.1\|WP_054233631.1\|3766687_3767125_+\|gamma-glutamylcyclotransferase	gnl\|CDD\|372719	pfam13772, AIG2_2, AIG2-like family. This family is found in bacteria and metazoa.	3.3105e-23
NZ_CP045643.1\|WP_153288939.1\|3771560_3771779_-\|hypothetical-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	1.22543e-06
NZ_CP045643.1\|WP_153288938.1\|3770237_3771461_+\|hypothetical-protein	gnl\|CDD\|227829	COG5542, COG5542, Predicted integral membrane protein [Function unknown].	4.71308e-07
NZ_CP045643.1\|WP_153288929.1\|3757025_3758627_+\|methylmalonyl-CoA-carboxyltransferase	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP045643.1\|WP_153288935.1\|3764000_3764963_-\|DeoR-family-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	8.77496e-83
NZ_CP045643.1\|WP_153288934.1\|3761347_3763120_+\|biotin/lipoyl-binding-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP045643.1\|WP_153288930.1\|3758651_3758861_+\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	1.94758e-07
NZ_CP045643.1\|WP_153288940.1\|3771962_3772610_-\|PH-domain-containing-protein	gnl\|CDD\|371225	pfam10756, bPH_6, Bacterial PH domain. This domain has a bacterial type PH domain structure. This domain was previously known as DUF2581. This family is conserved in the Actinomycetales. Although several members are annotated as RbiX homologs, RbiX being a putative regulator of riboflavin biosynthesis, the function could not be confirmed.	2.072e-05
NZ_CP045643.1\|WP_153288932.1\|3759856_3760477_+\|septum-formation-inhibitor-Maf	gnl\|CDD\|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	5.38887e-95
NZ_CP045643.1\|WP_153292932.1\|3753658_3754174_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.76967e-06
NZ_CP045643.1\|WP_153288927.1\|3752230_3753037_-\|enoyl-CoA-hydratase	gnl\|CDD\|181069	PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.	1.16307e-72
NZ_CP045643.1\|WP_153288937.1\|3768380_3770018_+\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP045643.1\|WP_153288928.1\|3756019_3756895_-\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	1.73489e-60
NZ_CP045643.1\|WP_153288936.1\|3767225_3768050_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	2.09793e-136
NZ_CP045643.1\|WP_153292934.1\|3772945_3773941_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|188646	cd00959, DeoC, 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.	8.33092e-76

>NZ_CP045643.1|WP_153288934.1|3761347_3763120_+|biotin/lipoyl-binding-protein
MRKVLIANRGEIAVRVARACRDAGIASVAVYAEPDRDAVHVRAADEAFALGGDTPATSYLDIAKVLKAAGDSGADAVHPGYGFLSENAEFAQAVLDAGLIWIGPPPQAIRDLGDKVAARHIAQRAGAPLVAGTPDPVSGADEVVAFAKEHGLPIAIKAAFGGGGRGLKVARTLEEVPELYDSAVREAVAAFGRGECFVERYLDKPRHVETQCLADTHGNVVVVSTRDCSLQRRHQKLVEEAPAPFLSDAQVAELYSSSKAILKEAGYVGAGTVEFLVGMDGTISFLEVNTRLQVEHPVTEEVAGIDLVREMFRIADGAELGYGDPELRGHSFEFRINGEDPGRGFLPAPGTVTTFAPPSGPGVRLDAGVESGSVIGPAWDSLLAKLIVTGATREQALQRAARALDEFTVEGMATAIPFHRAVVRDPAFAPELTGSADPFTVHTRWIETEFVNEIPAFTAPADTDTDDETGRETVVVEVGGKRLEVSLPSSLGMSLARTGLAAGAKPKRRAAKKSGPVASGDTLASPMQGTIVKIAVEEGQEVKEGDLIVVLEAMKMEQPLNAHRSGTVKGLSAEVGASITSGAAICEIKD
>NZ_CP045643.1|WP_153288933.1|3760492_3760993_-|hypothetical-protein
MVRRPVAWVAAIVLFVEAVGIALLNWFLGVVVDRQNMSLAGLDSDMMSASSKIGGLVFGLYFALCGVAALLVALRGRAPGVLGRILLISAAVVHGLLGAFTVGLVGWGAFAFMMVVVGLIVFTLLAFGPAAGPADAAPVDGGSGADGANGGGGGAPVAAPPAPSAS
>NZ_CP045643.1|WP_153288932.1|3759856_3760477_+|septum-formation-inhibitor-Maf
MTDQPRRRLVLASQSPARLNLLRQAGLAPEVIVSGVDEDAVSAPTPAELALALAEAKASVVAARPEVSGALVIGCDSVLDLDGQALGKPADAEEATARWKAMRGRAGTLQTGHCIHDTATKRYASATASTVVRFGEPTDAEIAAYVASGEPLHVAGAFTLDGRSAPFIEGIDGDHGNVIGISLPLVRRLLGELGVGITELWTPREK
>NZ_CP045643.1|WP_153288931.1|3759686_3759815_+|hypothetical-protein
MLWSDPENEPPKELRDMQDMLRRLGVLMALAMLLAMIVLGLM
>NZ_CP045643.1|WP_153288930.1|3758651_3758861_+|acyl-CoA-carboxylase-subunit-epsilon
MNIKVVRGNPTPEELAAALAVVQVRAAAAAGTPSGAAGTRDAWADPSRIATRRLPRPGASTWTRTYWPA
>NZ_CP045643.1|WP_153288929.1|3757025_3758627_+|methylmalonyl-CoA-carboxyltransferase
MSEPEELHHPDIHTTAGKLADLRRRVQEATHAGSARAVEKQHAKGKLTARERIDLLIDEGSFVELDEFAQHRSTDFGMEQNRPYGDGVVTGYGMVDGRPVAVFSQDFTVFGGALGEVFGQKIMKVMDFALKTGCPVIGINDSGGARIQEGVSALGMYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNAVSGVAHHMAGDEKDAIEYVKQLLSYLPSNNLSEPPVFPEEADLAITDEDRELDTIVPDSANQPYDMHTVIEHVLDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDIDASEKAARFVRTCDAFNVPVITFVDVPGFLPGVGQEHTGIIRRGAKLIYAYAEATVPLITVITRKAFGGAYDVMGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIAAVTDPDEAEATRARLIQEYEDALLNPYTAAERGYIDAVIMPSDTRSHLVRGLRQLRTKRESLPPKKHGNIPL
>NZ_CP045643.1|WP_153288928.1|3756019_3756895_-|biotin--[acetyl-CoA-carboxylase]-ligase
MTPRDASDANDNRWSDLDRPPLNATALRRALVRDGADGGLWSDLQVVAGTGSTNSDLVGLAVSGKADEGTVLVAEEQNAGRGRLDRRWTAPARSGLFFSVLLKPTGVPVERWGWLPLLTGVAVATALSRVAGVDTALKWPNDLLVTVDGGERKAGGILAERAGSDAVVVGIGINVTLREDELPVPGAGSLALAGATTTDRDTVLRAVLRSLEQWYGKWVAAGGDPDASGLQETYAAGCATLGRVVRAELPGDRSITGEAVAVDGDGRLVLATEEGVQQPVGAGDIVHLRPA
>NZ_CP045643.1|WP_153292932.1|3753658_3754174_+|hypothetical-protein
MAPDGVTGIGGGAEAEPRPGVADDGALDASPTVWAAPSARPATAGAPARGGAGATPAAGASPGATASTGPSGAAGATGPTGRAGTTGPSATARPGARPPGGAGAPVDDAPDTTGIPTAPVPSQPPAAPAPHPTPGATTHAPAPAPKPASPGLCVPIVGICVNSLTDPLGHG
>NZ_CP045643.1|WP_153288927.1|3752230_3753037_-|enoyl-CoA-hydratase
MVEQGDERRFGEFVAVRRHEYVAELALDRPKAMNAVSTEMARSLAGACAALAADPDVRVVVLTSTHERAFCVGADLKERNSFTDADLMRQRPVARAAYTGVLELPMPTVAAVHGFALGGGFELALSCDLIVADRTAVLGLPEVSVGVIPGGGGTQLLPRRVGAARAAELIFSARRLEAVEARELGLVDELVEEGRDRAEALALAARVAANSPVGLRAAKRALRLGQGLDLRAGLEVEDAAWRSVAFSGDRAEGVAAFNEKRKPQWPGR
>NZ_CP045643.1|WP_153288926.1|3750880_3752062_-|diguanylate-cyclase
MGEDRRLRAVVELAQGMAAAQTPRESWRAAALGACHALSGSFAALSVWERELGRLRVLVNVGERAPDEEEFPEGEAYPVHQFPEIVEFLHERWAGGGGPNAWVETADGPAGDRAGERGPGAPPSAGCGRVAALRRRGRGCCVVAPVVLHGRAWGELYVARPASEPFFDRPDADFATVLASVVAAGIAQTEQLEEARRLAFTDALTGLANRRAVDVRLDEAIGRHRAEGVVVSLVVCDLNGLKRVNDTRGHAVGDRLLERFGSVLSLCGAMLPGTLAARLGGDEFCLLAVGPPADEVVRVAAELCRRAADLELGEGVACGVASTGDPIGPVRSARRLFRLADAAQYRAKAVRAARPVVAGRAGPDDPVVRLADAPPPAEGERRRFRGRHEQRRP
>NZ_CP045643.1|WP_153288935.1|3764000_3764963_-|DeoR-family-transcriptional-regulator
MFAAERRQLILEMVRANGAVSLRELARVVQTSEVTVRRDVRALEAEGLLDRRHGGAVLPGGFTRESGFPQKSHLATAEKTAIADLAAGLVEEGEAIVVGAGTTTQELARRLARVPGLTVVTNSLLVAQALAHANRVEVVMTGGTLRGSNYALVGSGAEQSLQGLRVSRAFLSGSGLTAERGLSTSNMLSASVDRALVQAAGEVVVLADHTKLGTDTMFQTVPTDLITRLVTDEPPAHDDRAVTELQALADQGVQIAVAGQSGGGTGGDTAPAGRQPRRDVPLPGPRRGQVPGAGPQLRSATSLGEQSPGERARVADLRRR
>NZ_CP045643.1|WP_153292933.1|3765130_3766630_-|NAD(P)H-quinone-dehydrogenase
MRGRRPPGRRHLEACGTMEYVTRIVIIGGGPGGYEAALVAAQLGAEVTVVDCDGLGGASVLTDCVPSKTLIATAEVMTTFDSSYEELGIIVADDTPPSERSARVVGVDLGKVNRRVKRLALAQSHDITASVTRAGARVLRGRGRLEGMQSLDGSRKVVVRAADGTEETLVADAVLIATGGHPRELPDAQPDGERILNWTQVYDLDELPEELIVVGSGVTGAEFAGAYQALGSRVTLVSSRDRVLPGEDPDAAAVLEDVFRRRGMNVMARSRAESAKRVGDRVEVTLSDGRVISGSHCLMAVGAIPNSSGMGLEEAGVKVRDSGHIWTDKVSRTTAPGVYAAGDVTGIFALASVAAMQGRIAMYHFLGDAVTPLNLKTVSSNVFTDPEIATVGYSQADVDAGKIDARVVKLPLLRNPRAKMQGIRDGFVKIFCRPGTGIVVGGVVVAPRASELIHPISIAVDNNLTVEQIANAFTVYPSLSGSIAEVARQLHTRKLTDEG
>NZ_CP045643.1|WP_054233631.1|3766687_3767125_+|gamma-glutamylcyclotransferase
MSLYAAYAGNLDPRLMTRRAPHSPLRATGWLNGWRLTFGGEHMGWEGALVTLVEAPRSQVFVALYDIAPLDEDSMDRWEGVGLDIYRRMRVRVHTLEGEEPAWVYVLNGYEGGLPSARYLGEIADAAESAGAPHDYVMELRKRPC
>NZ_CP045643.1|WP_153288936.1|3767225_3768050_+|purine-nucleoside-phosphorylase
MNASLLPDDIHGDPYAAADAAATRLRELTGAETHDVALVMGSGWAPAADALGSPEAEFPVTELPGFPPPAVEGHGGKVRSYLIGDKRALVFLGRTHYYEGRGVAAVAHGVRTAVAAGCKTLVLTNGCGGLRADMRPGQPVLISDHINLTATSPIVGANFVDLTDLYSPRLRALCKEVDPTLEEGVYAQFTGPHYETPAEIRMARAIGADLVGMSTVLEAIAAREAGAEVLGISLVTNLAAGMTGEPLNHEEVLQAGRDSATRMGALLTQVLDRL
>NZ_CP045643.1|WP_153288937.1|3768380_3770018_+|phospho-sugar-mutase
MQDELIARAEAWLAEDPDAETREELAKLIDARDVTELAARFSGTLQFGTAGLRGELGAGPMRMNRAVVIRAAAGLAAYLKAKGETGGLVVIGYDARHKSADFARDTAAVMTGAGLRAAVLPRPLPTPVLAYAVRHLGAVAGVEVTASHNPPRDNGYKVYLGDGSQIVPPADAGIAAEIDAVTRLDTVPRPDSGWETLDEGVLNAYLARTDAVLDEGSPRTARTVYTAMHGVGKDVLLAAFARAGFPAPVLVAEQAEPDPDFPTVAFPNPEEPGAMDLAFAKARETDPDLIIANDPDADRCAVAVKGREGTDWRMLRGDEVGTLLARHLVDRGARGTFAESIVSSSLLGRIAEKAGLAYEETLTGFKWIARVEDLRYGYEEALGYCVDPEGVRDKDGITAALLITELASRLKEDGRTLLDLLDDIAVEHGLHATDQLSVRVEDLSVIANAMRSLRERPPTLLAGLPVTKAEDLTLGTDRLPPTDGLRYTLDGARVIVRPSGTEPKLKCYLEVVVPVGSHAGLPAAHAEAAELLTAIKRDLSAAAGI
>NZ_CP045643.1|WP_153288938.1|3770237_3771461_+|hypothetical-protein
MSPTASRPTSAPSRNSPGGLLPDATPSGRLPGAAAGLAASLRTQLGRAAPALLAYAAVRLVGLLVLALWAHAQHHGVRPILATQWDANWYLGIARHGYAHRLGTAHDANNLAFFPLYPFLVRAVAALTPGTAATAGLLITVAASFLAAWGVFAVGHRLHGRRAAVLLTVLWAALPVGLVQWMGYTESLFTAFAAWSLYAVLSERWLWAGWLAALSGLTRPTGIAVAAAVTVTALLALRHRFSSRALVAAAVAPAGWLAYVGWVGLRLGRWDGYFAVQRLWHNEWDGGAETLRRMREVLVTDSTPELFLVMVTVTLAACTALYVLCVWDRQPLPLLLFTGVLLLIVLGSGGVYFPRARFLLPGFPLLLPVALYLSRASRRFLTLALGTAVLGGAYCGAYMVLVWPSAP
>NZ_CP045643.1|WP_153288939.1|3771560_3771779_-|hypothetical-protein
MRPTSGRRSPRRGEGPAREGLRQPGGAFFLAEQGTPGGIVEHESTDAMFDNPRDPRDPRDPRTTDYVNGRFG
>NZ_CP045643.1|WP_153288940.1|3771962_3772610_-|PH-domain-containing-protein
MTTPDHQPPPPDASHPESRDRIYRSSAGIAGGVVLLAIIGWLGIDALVSGHGRTPWLTLAALILLVPLVSAFTLRPAVFANEERLRVRNPFRVIVVPWSAIATLRSGYSNEVVTTDGAKYQLWSIPVSLRSRKRAAKRQARGAAADSGGRVSPATASPAPARAQADQAMDDLRELAEAHPATEGGQGAVSVRWAYEVMGPALAGAVVLAILLAVG
>NZ_CP045643.1|WP_153292934.1|3772945_3773941_+|deoxyribose-phosphate-aldolase
MPTTAPSPKHSTSLEQGGAPTHALGDVTSSDSTLRRFLHGLPGVDAVGLEARAASLGTRSIKTTAKAYAIDLAISMVDLTTLEGADTPGKVRALGVKAVHPDPTDRTAPATAAVCVYPDMVATAKEAVAGSGVKVASVATAFPAGRAALDVKLADVRDAVAAGADEIDMVIDRGAFLAGHYLKVYDEIVAVKEASGAARLKVIFETGELSTYDNIRRASWLGMLAGADFIKTSTGKVAVNATPSNTLLMLEAVRDFRAQTGVQVGVKPAGGIRTTKDAVKFLVLVNETAGEDWLDNHWFRFGASSLLNDLLMQRQKLATGRYSGPDYVTVD
>NZ_CP045643.1|WP_153288941.1|3773946_3775383_+|aldehyde-dehydrogenase-family-protein
MASAFEYAPAPESRAVVDIAPSYGLFIDGEFTEAADGKVFKTVSPSTEEVLSEVARAGAEDVDRGVKAARRAFEKWSALPGSERAKYLFRIARIIQERSRELAVLETLDNGKPIKETRDADLPLVAAHFFYYAGWADKLDHAGFGANPRPLGVAGQVIPWNFPLLMLAWKIAPALATGNTVVLKPAETTPLSALFFADICRQAGLPKGVVNILPGYGDAGAALVEHPDVNKVAFTGSTAVGKAIARQVAGTDKKVTLELGGKGANIVFDDAPIDQAVEGIVTGIFFNQGQVCCAGSRLLVQESIQDELLDALKRRLSTLRLGDPLDKNTDIGAINSAEQLARITSLVEQGAAEGAERWSPACELPSSGYWFAPTLFTNVTQAHTIARDEIFGPVLSVLTFRTPDEAVAKANNSQYGLSAGIWTEKGSRILAVAGKLRAGVIWSNTFNKFDPTSPFGGYKESGFGREGGRHGLEAYLDV

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Crispr_ID: NZ_CP045643_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_9

3972396-3972580

Orphan

Consensus_repeat	Method
GCGATGTCGACGACGATGACGTCGACGCCCGCGTCGATGAGGGCCTGCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP045643_9

>merge|NZ_CP045643|9|3972396-3972580|PILER-CR
GATGCCGTCGACGCCCGCGTCGATGAGGGCCTGCGCGCCGTCACGGGTGGCGATGTTGCCGCCGATGACGTCGACGCCCGCGGAGTTCGACTTGATCTTGGCGACCATGTCGCCGACCAGGCGGGAGTGGCCGTGCGCGGTGTCGACGACGATGAAGTCGACGCCCGCCTCGATGAGGGCCTGGG

>NZ_CP045643|9|1|3972396-3972580|PILER-CR
GATGCCGTCGACGCCCGCGTCGATGAGGGCCTGCGCGCCGTCACGGGTG	GCGATGTTGCCGCC
GATGACGTCGACGCCCGCGGAGTTCGACTTGATCTTGGCGACCATGTCG	CCGACCAGGCGGGAGTGGCCGTGCGCGGTGTCGACGACGATGAAGTCGACGCCC
GCCTCGATGAGGGCCTGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153289081.1\|3978066_3978840_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP045643.1\|WP_153289071.1\|3956277_3957954_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP045643.1\|WP_153289072.1\|3959890_3962989_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP045643.1\|WP_153292954.1\|3963194_3965474_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP045643.1\|WP_060901476.1\|3980819_3981128_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP045643.1\|WP_153289074.1\|3968252_3969461_+\|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|223749
NZ_CP045643.1\|WP_153292953.1\|3958104_3959724_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP045643.1\|WP_153289079.1\|3976125_3977022_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176115
NZ_CP045643.1\|WP_153289083.1\|3982263_3982581_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153289082.1\|3979076_3980705_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP045643.1\|WP_153289076.1\|3970528_3971653_-\|GuaB3-family-IMP-dehydrogenase-related-protein	unknown	unknown	gnl\|CDD\|236322
NZ_CP045643.1\|WP_153292955.1\|3981457_3982210_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|366688
NZ_CP045643.1\|WP_153289069.1\|3952093_3954091_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP045643.1\|WP_003948568.1\|3974652_3975264_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP045643.1\|WP_153289080.1\|3977266_3978004_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP045643.1\|WP_153289075.1\|3969583_3970162_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237871
NZ_CP045643.1\|WP_153289073.1\|3966284_3967991_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223651
NZ_CP045643.1\|WP_153289078.1\|3975654_3975984_+\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP045643.1\|WP_153289070.1\|3954198_3956145_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP045643.1\|WP_148010063.1\|3973820_3974396_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236607

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153289081.1\|3978066_3978840_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	4.54165e-79
NZ_CP045643.1\|WP_153289071.1\|3956277_3957954_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.02512e-99
NZ_CP045643.1\|WP_153289072.1\|3959890_3962989_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.42506e-20
NZ_CP045643.1\|WP_153292954.1\|3963194_3965474_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.72475e-102
NZ_CP045643.1\|WP_060901476.1\|3980819_3981128_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	2.87295e-49
NZ_CP045643.1\|WP_153289074.1\|3968252_3969461_+\|nucleotide-sugar-dehydrogenase	gnl\|CDD\|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	5.57152e-124
NZ_CP045643.1\|WP_153292953.1\|3958104_3959724_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.23386e-102
NZ_CP045643.1\|WP_153289079.1\|3976125_3977022_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.0912e-58
NZ_CP045643.1\|WP_153289082.1\|3979076_3980705_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP045643.1\|WP_153289076.1\|3970528_3971653_-\|GuaB3-family-IMP-dehydrogenase-related-protein	gnl\|CDD\|236322	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein.	0
NZ_CP045643.1\|WP_153292955.1\|3981457_3982210_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|366688	pfam01522, Polysacc_deac_1, Polysaccharide deacetylase. This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase. It also includes chitin deacetylase from yeast, and endoxylanases which hydrolyzes glucosidic bonds in xylan.	3.38978e-31
NZ_CP045643.1\|WP_153289069.1\|3952093_3954091_+\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	6.4526e-37
NZ_CP045643.1\|WP_003948568.1\|3974652_3975264_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.73082e-50
NZ_CP045643.1\|WP_153289080.1\|3977266_3978004_+\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	1.86444e-66
NZ_CP045643.1\|WP_153289075.1\|3969583_3970162_+\|hypothetical-protein	gnl\|CDD\|237871	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional.	2.88243e-05
NZ_CP045643.1\|WP_153289073.1\|3966284_3967991_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	6.724e-164
NZ_CP045643.1\|WP_153289078.1\|3975654_3975984_+\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	4.18126e-28
NZ_CP045643.1\|WP_153289070.1\|3954198_3956145_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.05313e-99
NZ_CP045643.1\|WP_148010063.1\|3973820_3974396_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236607	PRK09648, PRK09648, RNA polymerase sigma factor ShbA.	4.99677e-91

>NZ_CP045643.1|WP_153289076.1|3970528_3971653_-|GuaB3-family-IMP-dehydrogenase-related-protein
MTEIEIGRGKRGRRAYAFDDIAVVPSRRTRDPKEVSIAWQIDAYRFELPFLAAPMDSVVSPATAIRIGELGGLGVLNLEGLWTRYEDPQPLLDEIAALDAETATRRLQEIYAAPIKEELIGQRIKEVRDSGVVTAAALSPQRTAQFSKAVVDAGVDIFVIRGTTVSAEHVSGAAEPLNLKQFIYELDVPVIVGGCATYTAALHLMRTGAAGVLVGFGGGAAHTTRNVLGIQVPMATAVADVAAARRDYMDESGGRYVHVIADGGVGWSGDLPKAIACGADSVMMGSPLARATDAPGKGHHWGMEAVNEELPRGKKVDLGTVGTIEEILTGPSHIPDGSMNIFGALRRAMATTGYSELKEFQRVEVTVADSQHKR
>NZ_CP045643.1|WP_153289075.1|3969583_3970162_+|hypothetical-protein
MSQPTPPPVPPAGNPYAGEPADRPPVPQQGVPQQDAPAAPQGAPQPGFPVAPFAPAAPARGNFALGLAAALGAGLVSAVLYGIVIGLTKHEIGYAAVGVGFLVGIAAGRAGGRSQSLPVAGVIFSVAAIYLGQLIGEAMIIAKQVGVGFNEVFFDHLGFVQDSWKADADPLTFVFFAVAAYVAFQSARKAGL
>NZ_CP045643.1|WP_153289074.1|3968252_3969461_+|nucleotide-sugar-dehydrogenase
MPADLAVIGLGHLGLPLAQAAVAAGVSTLGYKTGPEGGSLTPAELRRMLSGGFRPTTDAAELGRVRTAVICAPTPPGPDGAHDLAQVASAARTLAAHLRPHTTVILESPVHPGTTDDFLLPLLEDGSGLRAGRDFHLAYSPSRVDPGNRDFGPANTPKIIGGLTPACTESAAAFYGRLTDKVVRARGPREAETVQLLETNYRHVNIALVNEMAVLCHDLGVDLWDVIRCAETKPFGFQAFRPGPGVGGHGIPQDLTGRAPRSLRMVELAQQVNSHMPQYVIQRAAALLNEHGKSARAARVLLLGVTYKADLADQQGTPAHEIALRLMELGASVSYHDPLVPAWSVLGHPVPRADSLYEAAADADLTILLQQHRTYDLQGLSVKAQLLLDTRGATPTGAAHRL
>NZ_CP045643.1|WP_153289073.1|3966284_3967991_-|FAD-dependent-oxidoreductase
MRTARLGPAERVESLAGMAERELDVLVVGAGVVGAGTALDAVTRGLSTGLVEARDWASGTSSRSSKLIHGGLRYLEMLDFALVREALKERGLLLERLAPHLVKPVPFLYPLQHKGWERLYAGSGVALYDAMSMTSGHGRGLPTHRHLSRGKALRVAPALKKDALVGALQYYDAQMDDARYVATLVRTAAAYGAKVANRARVTGFLREGERVVGARVRDVEGGGEYEIHAKQVVNATGVWTDDTQAMVGERGQFHVRASKGIHLVVPKDRIHSSTGLILRTEKSVLFVIPWGRHWIIGTTDTDWDLDKAHPAASSADIDYLLEHVNSVLSVPLTRDDVQGVYAGLRPLLAGESDATSKLSREHTVAHPVPGLVVVAGGKYTTYRVMAKDAVDEAVHGLDQRVAECVTEDTPLLGAEGYRALWNARARIAQRTGLHVVRVEHLLNRYGVLAEEVMDLIATDPALGEPLPAAEDYLKAEIVYAASHEGARHLDDVLTRRTRISIETFDRGTRSAREAAELMAPVLGWDKDQIEREVEHYEKRVEAERESQRQPDDLTADAARLGAPDIVPL
>NZ_CP045643.1|WP_153292954.1|3963194_3965474_-|protein-kinase
MSDAERAGASRQDKSERLLAGRYRLGDVLGRGGMGTVWRAQDETLGRTVAVKELRFPSSIDEDEKRRLITRTLREAKAIARIRNNGAVTVFDVVDEDNRPWIVMELVEGKSLAEVIREDGVLTPKRAAEVGLAILDVLRSAHREGILHRDVKPSNVLISDDGRVVLTDFGIAQVEGDPSITSTGMLVGAPSYISPERARGHKPGPAADLWSLGGLLYASVEGVPPYDRGSAIATLTAVMTEPVEQPKNAGPLENVIYGLLAKDPEQRLDNERARAMLSEVVRAPEPRAAVPEPVDATKVVSLPPLPDDESRGGRSGGSGAKRGEEAGERFRGALRSVRKAASAAGAATAAATARAKSTGTAGTGAVGAEGAAAKTPTVPGPAAPAGTTPSKPADGKAAAAGAGAVTPGPRTAGADVSREPGARGGATVGLNSGPVGGPGAKDTAGSADSTRVVEAAGSTGSTGAGGAAGGSGAGRSPGSGWPVAPERPARPAPRASLTDVVPRRTLVVIAVVLALVVIGTVLALTLGGGDDSDAKGGKSGDTKTSASSGANAGSGGKDANKGAQTDNGGKKDDSSAPDGGGTAGATPGTDASGDASGSDDAGGSGGGGKESGSEGSAVESTYHGDQGFSIGLPKGWKYLSTDLAGARFTGPDGQKLLVGWTTTPKNDPVADWKNQERDMVRSQYQKVRIEKVDYRGWNTADWEFTYQEGGTKFRSIDRGFVVNDHQGYALMYTAKASAWDSDLRKDTWQTLTKTFQPKP
>NZ_CP045643.1|WP_153289072.1|3959890_3962989_-|protein-kinase
MDEYAGRVLADRYRLPLPPPDEDEFAESRAFDTYSGQEVHVRQVPLPEVVEAEVLDADGLPEGFVARDGGVRRATARTTRRPAEPAVRRAIEAAQAAAQIPDHPRLDQVFDVFAEGGSLWIVSELVPAKPLAALLAEKPLSPYRAAEVAADVLTALRVLHAHGWVHRNITERTVLVCDDGRVMLTGLAVGAAEEALCGYDPVPVRDFEGPAGAEGAPGGPGAPGAPGAPGPAGTRTSRVARAPQAPQIPRGSWASGGESAGQPRNAGSPGADSGTGHGPGVSRGVGGAPGATSPGGTFGAVVAGAQGSDAEAARRAAIEARAENGTPVAEPPAAGSAALARRALEAGGDARAARAGAIAAYRAGARAAARVHEQQRGGPAALPAPRPASPADSSAPPAQASGHIVEQRPETPPPGQIADPYGVAHTRAWHGAQPRPGTVGPGQGVAPDTGQGSGQSQGHDTGHGFGQGRDTGDRFGQGTDTGRGFAQDADRGRGFGQGTDPGGTRGHGHDIGQTAGNPIAQGPGQGPGQGQGQGQGLGRGGDQARTALPGGAAGHGPPELSRAGASALVPGQQRSAVPVPPSGRWDELVAGTPPRRGPATALAAERARQARMAVVGPVTERWAPEQAGPVHENWQLAAPIGPATDLWALGALLFRAVQGHAPYPEENTAELVQLVCAEPPAYAEECGPLRPVVESLLRQDPTERLDFEELRGWLRSLVRSAPEPEAGAHVVAAPPVDPRRLPIVRRRGELVRRRRAGLPATSPHARHKRARNDRPVRPAGRAVREGPRRLGRNLVLLVLLLLAAAVAYAMVFMPKNDRTNGSDGSPADSAGQLSPAPRNSSGTGADGSASSEPRPDQTSPGDDRSPSGQAGSPGTGSKAPGVPAGFTLRKDSAGFQVAVADGWDRSPKNGRGQVVYSHGDFELIVVPGRDSTATYGSDPLTYQRERESELQPFRDSTWATSSGMRRIDVGGRTMAEGQFTWQNSAGQELYVRNLVIVSGGRYHIVQVRGPEAETDEVTRLYEQASATYQVTG
>NZ_CP045643.1|WP_153292953.1|3958104_3959724_-|protein-kinase
MQGLLLAGRYRLVESIGSGGMGRVWRAHDEVLHRAVAVKELTAALYVTESDRAVLLARTHAEARAAARINHSAVVTVHDVLDHDSRPWIVMELVEGNSLADAVNEQGRIESAEAARIGLWVLRALRAAHEAGVLHRDVKPGNVLLSSDRRVLLTDFGIAQVEGDTTITRTGEIVGSVDYLAPERVRGHDPGPASDLWALGATLYTAVEGRSPFRRTSPIGTMQAVVEEEPAEPVNAGALGPVLAALLRKDPADRPSAAQAEQMLAEAAGGPPDTTRSHGQTGQTGYDTTRTGTGSGTRAQTAPATPFPAVTNETVPAPPKRHRLRTVALVVALAAIVGGGGAVAVQHFGKGGPGGSASGPSAPGASTRTSATPSDKGGQADGPTGWERRHDPVGFSVSLPKGWQRSVSIDEDGLRQVDYTPDKGKHLVRVAVDTAPDFSTSYDHMKYLDRRISGRLQNYEQLRLKEELFRDQPGVRWEYTWNALAKDAPHHFPGPYHAIDVGYMASDGIEYAIYEASPADDWDTTKKEFDRILRSFQEG
>NZ_CP045643.1|WP_153289071.1|3956277_3957954_-|protein-kinase
MGTQGENVRVIAGRYRLEARIGRGGMGVVWRAADQLLGRQVAVKEVALDDSLSADEARQQRDRTLREARAVAQLHHPHIIVVHDVVEEAERPYIVMELIDGGSLAERISADGPVDAREAARIGIALLGALRRAHDAGILHRDLKPANVLMEAGTDRVVLTDFGIAQVAGATTLTESGSFVGSPEYTAPERMSGARTGPESDLWSLGALLCTVLSGESPFRRDSLGGILHAVVMDEIRPPAQAAPLLPVVRGLLERDPDRRLDAVEAERLLLAFRQTGRTPRPAPPGYTPTQRNVPRRRPVPPDAAPPVPSAGTPVTAVSERSTKGSARGLLVAALVAALVGAGVSAAALLAHDGGDRGGGGGRAGTPAASTSPARGASASASASVSHEVSPATAHPTVTVTRERTPSAAGRTAPAGYRTVHDPDGYALAVPDGFTRDPQGERIFYMSPGQTFRIGIKVSDPVVGGPLVVMRSADADGPSTNPGYHDGTVTPTTHAGRSAALWEFTWEGFTEAEGARHTYDLCWEEGGRMYDVWVSAPVGRVTEAKKYFDVAVDTFAAS
>NZ_CP045643.1|WP_153289070.1|3954198_3956145_-|protein-kinase
MSSDGGVTQGADEPTSFALRPPRPVTPAEQQGVPHPGNPYADPARSAPRTQAGPPPPAQSAQPQPQPGPRSGPPQPHPHAQSEPHAQSAHAQSAHAESAHQPSQHPPRSGTAHPRPPRPPESAPPRSPQGSPAQDPGTGRLVAGRYRLLAKLGHGGMGTVWRAEDETVDREVAVKEPRLPDHLPERERANAFERMRREARAAARLDHPAVVNVHDVAVVDGRPWIVMELVRGRSLGAALEEGTLGAREAARIGLEVLGALEAAHAAGILHRDVKPDNVLLGPHGRVVLTDFGIARIEGETSLTDTGGFVGSPEYIAPERVLGQRPGPSCDLWSLGVVLYAATEGVSPFRRSNTPATLQSVLNSTPAAPASAKGPLAEAINGLLDKDPSRRLRADRVRRLLTEAAEPPARTPTETARTPTETVRVPEDGGTGGATRTGGTGRGGVRVPRAALFGLGAAVVAAAVAAYLVIANPFAGPLPDGWGKHHEKDITATLAVPAGYQRSTPDRTSDKGHWVTYTDWSGGIWIGLGVSRASEDASHQIKDSSAAQMYADNGDFKQSGAYALDMPEGPRTVPRETTYRGGRSAENTVVYMTNDSQDPRPRELRMFYYKSSAGDMYKLTVSYPGKGDFTARGREVARAAIANLDIDKR
>NZ_CP045643.1|WP_153289069.1|3952093_3954091_+|glycosyltransferase
MATPTVSVIIAAYNAMPYVTRTISSVAEQTIGTERLEVIVVDDGSTDGTAAELDRLTDVHPGLLRVVRQENSGGPAAPRNAGLDLARGEFVFFLDADDRLGPEALERMVAMAEENGTDVVLGKMVGGGGREAPTSMFRRNEPKTDVFTSRVYWTLSPMKLFRRDLLERHGLRFPTDLPTGEDQPFVASAYLHASGISVVADYDCVHWVLRDDGTNITATTSGSEPRLRYLARMVDLITDNVPPGPGRDRLAHRHLTVEVRSLVHSHLALETRERQRETLARLTRVITPLLHDGLRGELSAMAWLRLHLVRHDMPGELLELDRFEDESKESGVATPLVVDRGRAYARYPFFRDPARAVPDDCYDVTGQVGTRHHVSRAELRGTVLRLAGYAYLHRVATQDVTTELVLRERESGTEHRLPVTHTATPGLGAYEDEGRYTYDTAGFEARVDIETAAGAAPLDDGLWDISLAVGAQGLSREVRIGGKRGEDVSGVADTRVVDTPRDVRAVTLYTTKPHGNFTLDLGERKHRVLSHLKLAPARWNASTPTELLVSGRWTLGAYPDGPLELVLSGDGGATAVFPATRTPHGDTFTARVPAADLPAGVWSGELRLSGWSVTLPPLPENLTAAKWRRRGTPWYAKPLSGGSERFALRVGKTGLVKTVAGRVRP
>NZ_CP045643.1|WP_148010063.1|3973820_3974396_-|sigma-70-family-RNA-polymerase-sigma-factor
MRDDETTVIGALVHRAVDGDEQATHDLLAHVHPLALRYCRTRLSRLPGDARHFVEDLAQEVCVAVLLALPRYKDTGRPFEAFVFAIAAHKVADLQRAAMRHPGSTAVPSDEMPERPDDSLGPEERALLSSDAEWAKKLMANLPENQRELLLLRIAVGLTAEETGQMLGMSPGAVRVAQHRALSRLRALAEQ
>NZ_CP045643.1|WP_003948568.1|3974652_3975264_-|response-regulator-transcription-factor
MTSVLVCDDSPLAREALRRAVATVPGVERVTTAANGEEVLRRWGADRSDLILMDVRMPGLGGVETVRRLLSADPGARIIMLTVAEDLDGVALAVAAGARGYLHKDASRAELRATVTQALADPTWRLAPRRLRSAEMGAAPTLTAREIQVLEGMSHGRSNAEIGRELFLSEDTVKTHARRLFKKLGASDRAHAVALGFRWGLVR
>NZ_CP045643.1|WP_153289078.1|3975654_3975984_+|WhiB-family-transcriptional-regulator
MADFSRLPGPNADLWDWQLLAACRGVDSSLFFHPEGERGAARSARENSAKEVCMRCPVRAQCAAHALAVREPYGVWGGLTEDEREELMGRARNRLVTASATGSGSASNT
>NZ_CP045643.1|WP_153289079.1|3976125_3977022_-|LysR-family-transcriptional-regulator
MIEARHLRVLRAVAATGSFSAAGRELGCTQPAVSQQMKALESSVGTPLLIRTGREMRLTQAGEALARHAAGIIAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPTALAALRAAHPGTRVSLEEAEPPESVDKLRDGDCDIALAFRYEGAAGVEEWDDLVVRPLLRDRLVGLVPEGHRLARAGSVTIGELAGEPWIAGCPRCRGQLVEVCRREGFVPRIDFATDDYPAVVGLVGAGLGVAVLPELAIESVRPKGACAVTVEPAVRREIVALTLPDLAQVPAVAATLDQLARAAAR
>NZ_CP045643.1|WP_153289080.1|3977266_3978004_+|MOSC-domain-containing-protein
MQLLSLNVGRPLAVPHTDPAVGVTGIDKRPVAGPVRVTAPGPKGVGASGLAGDTVCDLRHHGGDDQAVYAVAREDLDDWERELGRPLVNGAFGENLTTRGLDVSGARIGERWRVGSELVLEVTSGRIPCRTFQEHLGERGWVKRFTRKAAPGAYLRVIEPGEIRAGDPIEVVHRPEHEVTVAVEFRAMTTERELLPRLLAAGPALHPEASAAAEKYVARQGGQLSAQHAGGAAGDNVGTAGAGRV
>NZ_CP045643.1|WP_153289081.1|3978066_3978840_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTTALITGSTAGIGAAFARRLAADGHNLVLVARDTERLAEQATELHDRHGIEAEVLTADLATDDGIETVARRLSDRRNPVDLLINNAGFGNKGRYLEVSMADELTMLKVHCEAVLRLTSAATAAMRERGRGGVVNVASVAAFVPRGTYGASKAWVVQFTQGAAKDLAGSGVRLMALAPGFVRTEFHQRAGMGTDNIPNWMWLDADKLVAAALADLARGKTLSIPDPRYKALMGVVKVAPRGLLGGITSKTGRKYGPQ
>NZ_CP045643.1|WP_153289082.1|3979076_3980705_-|chaperonin-GroEL
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVELDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGIDAAVKAVCEELLATARPIDEKSDIAAVAALSAQDSQVGELIAEAMDKVGKDGVITVEESNTFGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILIHQGKISSIQDLLPLLEKVIQANASKPLLIIAEDVDGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDLATLTGGQVIAEEVGLKLDQVGLDVLGTARRVTVTKDDTTVVDGGGDHDAVVGRVNQIKAEIENTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALVHAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNAATGEYGDLVKSGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEADAGHGHGHGHSH
>NZ_CP045643.1|WP_060901476.1|3980819_3981128_-|co-chaperone-GroES
MTTTSSKVAIKPLEDRVVVQPLDAEQTTASGLVIPDTAKEKPQEGVVLAVGPGRFENGERLPLDVSTGDIVLYSKYGGTEVKYNGEEYLVLSARDVLAIIEK
>NZ_CP045643.1|WP_153292955.1|3981457_3982210_-|polysaccharide-deacetylase-family-protein
MAAVLATVLLAGCAQSVDPIERLGKKAAQEVRRTRPHGPAAATYRRWGLSAPLAPAPRPPARSGVRRDRTGLVPVVGRVPTHDKVVFLTYDDGAERDPRFVDMVRELRLPVSMFLTDSVVGPGYGHFARLREVGASVQNHTLDHASLRGLPYAGQRAEICGQQEKLKARFGIRPRLFRPPYGTYDTTTLRAAADCGVTAVVLGREADSHRLRPGDILSGFEEPNLTAATTRLLRRIQAEGFTPARLENYL
>NZ_CP045643.1|WP_153289083.1|3982263_3982581_-|hypothetical-protein
MRSVRQADKNDAKGTVALSGITALTVIGLVSGRAGGGSAEVRPAPGRQQGPHAPAAGPLGSYATRLLIRLRGTKDRRAAMPDMIRRFLDEVTGEGYAVARLGDHL

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Crispr_ID: NZ_CP045643_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_10

4150970-4151059

Orphan

Consensus_repeat	Method
CACGCGGGCGCGGACGCCGGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_10

>merge|NZ_CP045643|10|4150970-4151059|CRISPRCasFinder
CACGCGGGCGCGGACGCCGGGACACGCTCCACGCCAGGGCCGGCCCCACGCCGGTCCGGGCCGGGCGCACGCGGGCGCGGACGCCGGGAC

>NZ_CP045643|10|9|4150970-4151059|CRISPRCasFinder
CACGCGGGCGCGGACGCCGGGAC	ACGCTCCACGCCAGGGCCGGCCCCACGCCGGTCCGGGCCGGGCG
CACGCGGGCGCGGACGCCGGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153289195.1\|4137549_4138242_-\|demethylmenaquinone-methyltransferase	unknown	unknown	gnl\|CDD\|234689
NZ_CP045643.1\|WP_153289208.1\|4155600_4156503_-\|4-hydroxybenzoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|183814
NZ_CP045643.1\|WP_153289199.1\|4143443_4144244_-\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|224900
NZ_CP045643.1\|WP_153292968.1\|4150008_4150938_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366711
NZ_CP045643.1\|WP_153289210.1\|4158105_4158516_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379161
NZ_CP045643.1\|WP_153289211.1\|4158722_4159826_+\|abortive-phage-infection-protein	unknown	unknown	gnl\|CDD\|381626
NZ_CP045643.1\|WP_153289196.1\|4138313_4139105_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376607
NZ_CP045643.1\|WP_153289198.1\|4142172_4143372_-\|dehypoxanthine-futalosine-cyclase	unknown	unknown	gnl\|CDD\|274731
NZ_CP045643.1\|WP_153289202.1\|4151118_4151778_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP045643.1\|WP_153289201.1\|4147792_4149691_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341233
NZ_CP045643.1\|WP_153289206.1\|4154269_4154725_-\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214628
NZ_CP045643.1\|WP_153289203.1\|4151862_4152165_-\|DUF4229-domain-containing-protein	unknown	unknown	gnl\|CDD\|379415
NZ_CP045643.1\|WP_153289204.1\|4152260_4152800_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP045643.1\|WP_153289209.1\|4156499_4157951_-\|menaquinone-biosynthesis-decarboxylase	unknown	unknown	gnl\|CDD\|163413
NZ_CP045643.1\|WP_153289207.1\|4154885_4155569_-\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241
NZ_CP045643.1\|WP_153292967.1\|4144338_4146123_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP045643.1\|WP_153289197.1\|4139984_4140461_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP045643.1\|WP_153289205.1\|4152919_4154083_-\|aminofutalosine-synthase-MqnE	unknown	unknown	gnl\|CDD\|213851
NZ_CP045643.1\|WP_148009945.1\|4147416_4147620_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP045643.1\|WP_153289200.1\|4146224_4147073_-\|menaquinone-biosynthesis-protein	unknown	unknown	gnl\|CDD\|270352

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153289195.1\|4137549_4138242_-\|demethylmenaquinone-methyltransferase	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	4.20206e-132
NZ_CP045643.1\|WP_153289208.1\|4155600_4156503_-\|4-hydroxybenzoate-octaprenyltransferase	gnl\|CDD\|183814	PRK12888, ubiA, 4-hydroxybenzoate octaprenyltransferase.	1.75424e-173
NZ_CP045643.1\|WP_153289199.1\|4143443_4144244_-\|prepilin-peptidase	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.63759e-13
NZ_CP045643.1\|WP_153292968.1\|4150008_4150938_+\|hypothetical-protein	gnl\|CDD\|366711	pfam01575, MaoC_dehydratas, MaoC like domain. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase. The MaoC protein is found to share similarity with a wide variety of enzymes; estradiol 17 beta-dehydrogenase 4, peroxisomal hydratase-dehydrogenase-epimerase, fatty acid synthase beta subunit. Several bacterial proteins that are composed solely of this domain have (R)-specific enoyl-CoA hydratase activity. This domain is also present in the NodN nodulation protein N.	4.74961e-09
NZ_CP045643.1\|WP_153289210.1\|4158105_4158516_+\|hypothetical-protein	gnl\|CDD\|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	2.80155e-07
NZ_CP045643.1\|WP_153289211.1\|4158722_4159826_+\|abortive-phage-infection-protein	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	2.28363e-07
NZ_CP045643.1\|WP_153289196.1\|4138313_4139105_-\|acyltransferase-family-protein	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	1.1207e-07
NZ_CP045643.1\|WP_153289198.1\|4142172_4143372_-\|dehypoxanthine-futalosine-cyclase	gnl\|CDD\|274731	TIGR03699, menaquin_MqnC, dehypoxanthine futalosine cyclase. members of this protein family are involved in menaquinone biosynthesis by an alternate pathway via futalosine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP045643.1\|WP_153289202.1\|4151118_4151778_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.99547e-16
NZ_CP045643.1\|WP_153289201.1\|4147792_4149691_-\|AMP-binding-protein	gnl\|CDD\|341233	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases. This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
NZ_CP045643.1\|WP_153289206.1\|4154269_4154725_-\|AsnC-family-transcriptional-regulator	gnl\|CDD\|214628	smart00344, HTH_ASNC, helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli).	2.51359e-33
NZ_CP045643.1\|WP_153289203.1\|4151862_4152165_-\|DUF4229-domain-containing-protein	gnl\|CDD\|379415	pfam14012, DUF4229, Protein of unknown function (DUF4229). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 95 and 122 amino acids in length.	9.56792e-18
NZ_CP045643.1\|WP_153289204.1\|4152260_4152800_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.48099e-12
NZ_CP045643.1\|WP_153289209.1\|4156499_4157951_-\|menaquinone-biosynthesis-decarboxylase	gnl\|CDD\|163413	TIGR03701, mena_SCO4490, menaquinone biosynthesis decarboxylase, SCO4490 family. Members of this protein family are putative decarboxylases involved in a late stage of the alternative pathway for menaquinone, via futalosine, as in Streptomyces coelicolor and Helicobacter pylori. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP045643.1\|WP_153289207.1\|4154885_4155569_-\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	3.1732e-66
NZ_CP045643.1\|WP_153292967.1\|4144338_4146123_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.87387e-85
NZ_CP045643.1\|WP_153289197.1\|4139984_4140461_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.1668e-05
NZ_CP045643.1\|WP_153289205.1\|4152919_4154083_-\|aminofutalosine-synthase-MqnE	gnl\|CDD\|213851	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP045643.1\|WP_148009945.1\|4147416_4147620_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.01403e-36
NZ_CP045643.1\|WP_153289200.1\|4146224_4147073_-\|menaquinone-biosynthesis-protein	gnl\|CDD\|270352	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold. This group includes the SCO4506 protein from Streptomyces coelicolor and related hypothetical proteins. SCO4506 is an ortholog of Ttha1568 (MqnD) from Thermus thermophilies HB8. MqnD is an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. SCO4506 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.40778e-109

>NZ_CP045643.1|WP_153292968.1|4150008_4150938_+|hypothetical-protein
MTARPSPGTATRTLTAPPALTPHLLRGALLSPFKHPRADAPVPPDRLVLQDLRVDLAHLAAYERICGFATGSDALPVTYPHVLGFPLAMRLMASRPFPLPLLGLVHTSIEIGQRRAAAATGTYELAVHVEGLAPHRRGTEARVVTEARAGGELVWASRSTYLARHRSPGGALSAATEPAPPPAPAPAGNADAVTRPLPARAEWRLGGDVGRRYGAVSGDRNPLHLYPFTARLFGFPRPLAHGMWTVARCLAEQGPQGPVRVHADFKAPVLLPGTVTYAADGPAFELRAPGDPGRPHLTGEVRPADPGRV
>NZ_CP045643.1|WP_153289201.1|4147792_4149691_-|AMP-binding-protein
MPSPYHSPPSLVEPEIRRLDGIVREVSVPPLAAPVTHGSLADIPFDNAGEAPGEPVLSRKDADGGWKDVTAAEFAAEVLAVAKGLIAEGLAPGDRIAIMARTTYEWTLLDFAAWAAGLVTVPVYPTSSAFQVRWILQDSGAVALATETVAQASALGPERDRIPDLRHMWVFEKGHVERLAERGRDVPDQEVAVRRGVLGPDTLATVIYTSGTTGRPKGCVLTHGNFFAEIDNAIELLHPIFRSRTSDAASMLLFLPLSHVFGRMVAVACLRARVRLGHAPSLRTEDLLADLASFRPTFLLAIPYVLEKVFNTGRATAEKLGRGASFDRAARIACRYGEAVEARQHGTGPGPSRALRVARALYDPLVYRRIRNALGGKVRYAICGGSPLGRRLAAFYAGAGIDIYEGYGLTEATAAATVTPPLKPRLGTVGWPMPGTRVRIAGDGEVLLSGGQIFRGYWDPHAGGVVGAAPDGWFATGDIGELDDGGYLSITGRKKEILITAGGKSVAPAPLENWLRSHPLIAQCIVLGDRRPYVTALVTLDLDGITHWRQMIGKHPVPPELLVDDPELNVIIQRAIDEANKLVSRPESIRRFAVLPVDFTEEAGHVTPTLKLKRAAIERDFGKEIESLYLKQ
>NZ_CP045643.1|WP_148009945.1|4147416_4147620_+|cold-shock-protein
MATGTVKWFNAEKGFGFIAQEGGGPDVFVHYSAINASGFRSLEENQAVSFDVTQGPKGPQAENVTPL
>NZ_CP045643.1|WP_153289200.1|4146224_4147073_-|menaquinone-biosynthesis-protein
MDNSRTRPRVGHIQFLNCLPLYWGLARTGTLLDFELTKDTPEKLSEKLVRGDLDIGPITLVEFLKHADELVAFPDIAVGCDGPVMSCVIVSKVPLDQLDGARVALGSTSRTSVRLAQLLLAESVGVQPSYYTCPPDLSLMMQEADAAVLIGDAALRANLLDGPKFGLQVHDLGTLWKEWTGLPFVFAVWAARRDYLEREPLVTRKVHEAFLSSRDLSLDEVSKVAEQAARWEAFDERVLEQYFTTLDFRFGAPQLAAVREFARRVGSTTGFPADVRVELLKS
>NZ_CP045643.1|WP_153292967.1|4144338_4146123_-|protein-kinase
MQPLGVDEPTVVGPYRLLGRLGSGGMGRVYLGRSAGGRTVAVKIVHPHFALDEEFRARFRREVEAARRVGGAWTAPVLDADPEAPVPWVATGYAAGPSLAAAVADAGPLPVPSVRVLGAGLAEALGAVHVLGLVHRDVKPSNVLLTLDGPLLIDFGIARATDGTASLTSTGVSVGSPGYMSPEQILGKAVTGAADVFSLGAVLVYAATGESPFPGDSSAALLYKVVHEEPRLGSLEGELRDLAAACLAKNPAGRPAPAEVAARLAPGGAARSVTAGWLPGPLVEQVSRGAVQLLNLEAAEAAPPGPVGFDSPSAGSDSGPGTPGSGTSRAGTPQVGTSGAGPHATGGVFGPPPSMPPYPDRPAHPAHPTYVPDQREPRDAAEARTGHSTGPGREPGKLSVSLATTSVPGTDGRGRRVSCTLALAVAGALAAVTVGSAFLFDLLPGGDHSSDSGGADSTASRPAASPDTSGPADTEPGPVPAKYLGTWEGDGYALDGKLPAGTFRVTLHRAAAGEEVGTFRSTDLIGGVCEDVLVLRKVTDQRLTATSVARKSNPGTCTTGSHEVRLTPAGGDLKYDTDNPDAGDPVARMSKLPN
>NZ_CP045643.1|WP_153289199.1|4143443_4144244_-|prepilin-peptidase
MDPVLWLTAVAAAWGAAVGVLVPRAAHRFSVEPDEAWRDRCPGGHTITGVAGGWLGPARCAECAGRTVPVASGAAGRPPRLAAAASYGPRTPLVALTTALVCAGLSLATGTRPELGAWLLLAPLGVLLALVDFGVQRLPDVLTLPLAGLALALLGAAAVVPEHTGDWPTALFGALALGCAFFLLFLVNPNGMGFGDVKLAVGLGAVLGWYGWGTVVLGTFAGFLFGGLYGLGLVLARRAGRRTSIPFGPFLIAGAYVGLLMGAYAA
>NZ_CP045643.1|WP_153289198.1|4142172_4143372_-|dehypoxanthine-futalosine-cyclase
MTEKADLQSVLDRAAEGGRITPEEALDLYRDAPLHALGAAADAVRRRRYAGTEHIATYIIERNINYTNVCVTACKFCAFYAAPKDTAKGWTRDLDDILRRCAETVELGGTQIMFQGGHHPDYGVEYYEKHFSAIKENFPQLVIHSLGASEVEHMARISEVSVEEAITRIHQAGLDSFAGAGAELLPARPRKAIAPLKESGERWLEIMETAHGLGVESTSTMLMGTGETNAERIEHLRMIRDVQDRTGGFRAFIPYTYQPENNHLKGRTQATLFEYLRMIAIARLFFDNVAHIQGSWLTTGKEVGQLSLHYGADDLGSIMLEENVVSSAGAKHRSNRMEIIDLIRKAGRVPAQRATTYEHIVVHDDPADDPVDERVMSHISSTAIAGGTAHPELKLLASN
>NZ_CP045643.1|WP_153289197.1|4139984_4140461_-|hypothetical-protein
MQSESAVENRAQGRGRRRERGNGPDEGPVFVDNSGRRAHLLRRISVLAGAVCLGYALVLGMTFMGWGTSLTPSSLFPFSGDRAGSAPGGAFPPRGGAAPTGPGGGATPTGPGGGATPTGPRGGATPTGRPTATSPSGAPSGASSPAPAPSESASPGAH
>NZ_CP045643.1|WP_153289196.1|4138313_4139105_-|acyltransferase-family-protein
MLVHDWMPGWQIVFWIVPVGDPPGDAWGTQAREILWYLRTYLWFVLLSPLLLKVFRRAPVPALLLSLVPVVVLRCGWQPPYDRFGGGLTDFATFLFCWLAGFAHREGVLRRPRPAPVIAASLALLALGGWYAFAHQAEYGTYDLDEIPVAQAFWSAGFVMLLMYVKAHYRVDFARLARFRRLDRTVTIFNGRAVTIYLWHEIALVAAVPPIDRFWKVPAFEKWLPLESHWFMLGVGWVLIWIAIPLFGWVEDVAARKKPRRFP
>NZ_CP045643.1|WP_153289195.1|4137549_4138242_-|demethylmenaquinone-methyltransferase
MTRASLDKQPHEVASMFDDVAERYDLTNDLLSLGQDRVWRREVAKAVDARPAQKILDLAAGTATSSLPFARTGAYVVPCDFSLGMLRVGKKNHPWLPLTAGDATKLPFKDDTFDAVTISFGLRNVQDTDTALSELYRVTKPGGRVVICEFSHPTWAPFRTVYTEYLMRALPPVARAVSSNPDAYVYLAESIREWPDQPALAERLRKAGWSKVAWRNLTGGVVALHRGFKA
>NZ_CP045643.1|WP_153289202.1|4151118_4151778_-|TetR-family-transcriptional-regulator
MGAVKNKRMPRAVREQQMLDAAVRTFGQRGYRSASMDEIADLAGVSKPLVYLYLNSKEDLFTACIRREAVALTAAVRAGVGPGLTADRQLWEGLRAFFTHTAQNPDGWSVLHRQARTHGEPFAAEVAAMREELVAFVTELILVAAREAHRDPSLPEHEVAGLAEALVGAAESLAAWANATPGVSAKQAAATLMNFAWAGLGGLMENRPWSPPPPLDSHG
>NZ_CP045643.1|WP_153289203.1|4151862_4152165_-|DUF4229-domain-containing-protein
MGRYTLMRLGIFAGCLVVVWGLVYSGIAPRGLGDSNYMWVVLLALVISAPISFVVLRKERDRASAQVVARVDRARANLEENRRQEDHVDDATRGAQSQTS
>NZ_CP045643.1|WP_153289204.1|4152260_4152800_-|GNAT-family-N-acetyltransferase
MPLTFTLFTEDTKPTPALPDQLLALWTDVSNAGGAVGFVPPVTPADIRPRAEAHLSAMAEGRTRLLAAFTADGRLAATAFLSFNDHPLMRHWAWLYTVMVDPALQGRGYGAELLREAERQARDLGLDALRLTCRGGEGLERFYASCGYKEVGRVPEAIRVAPGDDRDDIVMLLPLPRVE
>NZ_CP045643.1|WP_153289205.1|4152919_4154083_-|aminofutalosine-synthase-MqnE
MDVGLKRELEDKVRAGERLTREDGIALYESDDLAWLGGLAHEVRTRKNGDVVHFNVNRHLNMTNVCTASCAYCSFQRKPGEKDAYTMRIEEAVRLAKAMENEHLTELHIVNGLHPNLPWRYYPRSLSELKKALPNVSLKAFTATEIHHFETISGMSASDILDELIEAGLESLTGGGAEIFDWEVRQHIVDHRTHWEDWSRIHRLAHSKGLKTPATMLYGHIEEPRHRVDHVLRLRELQDETGGFQVFIPLRYQHDFVDVKDGKVRNKLQARTQMATGAEALKTFAVSRLLFDNVPHVKVFWVMHGVQTAQLALQHGADDMDGSVVEYKITHDADNYGTPNKLTREDLLDLIRDAGFRPVERNTRYEIIREYDGADPARRDEPQPMRV
>NZ_CP045643.1|WP_153289206.1|4154269_4154725_-|AsnC-family-transcriptional-regulator
MDAVDRQLIQALRENGRASYAELGRLVGLSGPSVTDRINRLEAAGVIIGYRATVDSASLGLGVTALIGISLSDAADHEDVAHRMRDLGEIEDCWFIAGDDSFMLKVRASDVDGLEKTIRRLSGTKGVSRTRTTIVLSTKWENRVGELPEEE
>NZ_CP045643.1|WP_153289207.1|4154885_4155569_-|UbiX-family-flavin-prenyltransferase
MKPGQTQRRPWIVGVSGASGTPYAAAVLRALLAAGESVDLVVSRASRLTLLDETGLSFRDAHWRDDLREWLARGADGKPGTFDAFEEHLDAVRHWSAGDLAAGPSSGSYPAQGMLIVPASTACVAGVALGLSKDLLQRAASVTLKEGRRLVVSVRETPLSGQTLRHLVSLDDAGATVLPASPAFYAGATHIQDLVDFVAGRVLDAAGVEHRLYRRWEGELGGGSRAT
>NZ_CP045643.1|WP_153289208.1|4155600_4156503_-|4-hydroxybenzoate-octaprenyltransferase
MSSASAALPQPGRTKAFLRLVMIEHSVFALPFAYIAALTAMYELDENIHWGRLFLVTVAMVGLRTFAMAANRIIDREIDARNPRTAHRELVTGAMSVKHAWTGALVALVFFLGAAALLNPLCLALAPVAVIPMVVYPYGKRFTNFPQAILGLAQAMGPIGGWLAITGEWSWNAVILGLAVGVWIGGFDLIYACQDVETDREVGVLSVPARFGIPAAVRGARVCHAVTTALFVWYALATDAGVFFWFGLVIVAAAFLYEHSIVKPHDLSRLNRAFFSVNGFIGIALFVCALLDLLVRGLTV
>NZ_CP045643.1|WP_153289209.1|4156499_4157951_-|menaquinone-biosynthesis-decarboxylase
MAYDDLRSLLRALEREGDLKRIKAEVDPYLEVGEIVDRVQKAGGPALLFENVRGSAMPLAMNVFGTDRRLLKALGLKSYGEISEKIGGLLRPELPHGFVGVREAFGKLGAMAHVPPKKVKEAPVQEVVLRGDDVDLDALPALFTWPQDGGSFFNLGLTHTKDPESGIRNLGLYRLQRHDKRTIGMHWQIHKDSRNHYQVAARRGERLPVAIAFGCPPAVTYASTAPLPGDIDEYLFAGFIQGKRIEMVDCKTVPLQVPAQAEVVLEGWLEPGETLPEGPFGDHTGFYTPQEPFPALTIDCVTMRKRPLLQSIVVGRPPTEDGPLGRATERFFLPLLKIIVPDIVDYHLPEAGGFHNCAIVAIDKKYPKHAQKVMHAVWGAHMMSLTKLIVVVDSDCDVHDLHEVAWRALGNTDYSRDLTVVEGPVDHLDHASYQQFWGGKAGIDATRKWPEEGYTRDGGWPEMVLSDPQTAATVDRRWKEYGL
>NZ_CP045643.1|WP_153289210.1|4158105_4158516_+|hypothetical-protein
MLRYLPFLLVLALWIYAFIDCLNTPEEEVRGLPKVVWVIIILLFGEVLVGPVAWLVAGRTRRGGPVGAAATGWRRDQGAPYVAPDDNPEFLKSLGADKPERPDRDEALLKDWEADLQRREEELRRREQQSKSDDDA
>NZ_CP045643.1|WP_153289211.1|4158722_4159826_+|abortive-phage-infection-protein
MRGISRARFLGMAAAGAAAAVLPAGRAGATDGRRGLTYRGAVYEVADGETPGTGWSARRMRGDLRALAHDLHADSVKVTGDGVERLAATATEAAERGLRVWLEPTLGDVPERDILDHLAETGRCAERLRRQGAGVHLSVGCEFVLYVPGIVPGANVQERVENLLAGTFDPVRMARRLHRFTARAAGVGRSVFRGRLTYAAAQDEDVDWGLFDLVGVDYYGFFRHRDAYVRDLARYTRFGKRVAVMEFGCCTFEGAPERGGMGWDVVDHGKEPPEIKEGIVRSERAQAAYLTDVLSVFESMGLYAAMAYTFVTPDAPHRPRDPRHDLDTASYSLVKAVEDRRPEAPGRYWEPKESFRALARQYARHGR

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Crispr_ID: NZ_CP045643_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_11

4511140-4511774

Orphan

Consensus_repeat	Method
TTGTTGTTNTTGTTGTTGTTGTT	CRT

9 spacers

The CRISPR arrays of NZ_CP045643_11

>merge|NZ_CP045643|11|4511140-4511774|CRT
TTGTTGTTGTTATTGTTGTTGTTGTTACCCCCACCTCCGTTGTTGTTGTTATTGTTGTTGTTCCCGCCTCCGCCGTTGTTGTTGTTGTTGTTGTTGTTGTTCGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTCCCGCCTCCGCCGTTGTTGTTGTTATTGTTGTTGTTGTTCGCGCCCCGGCCTCCGTTGTTGTTATTGTTGTTGTTGTTCCCGCCTCCGCCGTTGTTGTTGTTATTGTTGTTGTTGTTCGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTCCCGCCTCCGCCGTTGTTGTTGTTATTGTTGTTGTTGTTCGCGCCCCGGCCTCCGTTGTTGTTATTGTTGTTGTTGTTCCCGCCCCCGCCGTTGTTGTTGTTATTGTTGTTGTTGTTCGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTCCCGCCCCCGCCGTTGTTGTTGTTATTGTTGTTGTTGTTCGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTCGCGCGACCTCCGCGGTTGTTATTGTTGTTGTTGTTATTGTTGTTGTTCGCGCGCCTACCTCGGTTGTTGTTGTTGTTATTGTTGTT

>NZ_CP045643|11|1|4511140-4511774|CRT
TTGTTGTTGTTATTGTTGTTGTT	GTTACCCCCACCTCCGTTGTTGTTGTTATTGTTGTTGTTCCCGCCTCCGCCGTTG
TTGTTGTTGTTGTTGTTGTTGTT	CGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTCCCGCCTCCGCCGTTG
TTGTTGTTATTGTTGTTGTTGTT	CGCGCCCCGGCCTCCGTTGTTGTTATTGTTGTTGTTGTTCCCGCCTCCGCCGTTG
TTGTTGTTATTGTTGTTGTTGTT	CGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTCCCGCCTCCGCCGTTG
TTGTTGTTATTGTTGTTGTTGTT	CGCGCCCCGGCCTCCGTTGTTGTTATTGTTGTTGTTGTTCCCGCCCCCGCCGTTG
TTGTTGTTATTGTTGTTGTTGTT	CGCGCCCCGGCCTCCGTTGTTGTTGTTGTTATTGTTGTTGTTCCCGCCCCCGCCG
TTGTTGTTGTTATTGTTGTTGTT	GTTCGCGCCCCGGCCTCCG
TTGTTGTTGTTGTTATTGTTGTT	GTTGTTGTTCGCGCGACCTCCGCGGTTGTTA
TTGTTGTTGTTGTTATTGTTGTT	GTTCGCGCGCCTACCTCGG
TTGTTGTTGTTGTTATTGTTGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153289471.1\|4526879_4531634_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334197
NZ_CP045643.1\|WP_153289458.1\|4501792_4503631_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP045643.1\|WP_153293003.1\|4516825_4517872_+\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|274824
NZ_CP045643.1\|WP_153289460.1\|4504979_4507262_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP045643.1\|WP_153289461.1\|4507553_4509059_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP045643.1\|WP_153289466.1\|4515558_4516053_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153289464.1\|4512387_4514979_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP045643.1\|WP_153289462.1\|4509417_4510446_+\|YIP1-family-protein	unknown	unknown	gnl\|CDD\|377418
NZ_CP045643.1\|WP_148012414.1\|4499461_4499908_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133387
NZ_CP045643.1\|WP_153289456.1\|4499912_4501100_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237665
NZ_CP045643.1\|WP_153289467.1\|4518171_4518681_-\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|225145
NZ_CP045643.1\|WP_153289465.1\|4515139_4515469_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153289470.1\|4524141_4526313_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP045643.1\|WP_153289468.1\|4518691_4519267_-\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
NZ_CP045643.1\|WP_153289459.1\|4503726_4504746_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_CP045643.1\|WP_153289472.1\|4531637_4532027_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153289457.1\|4501133_4501796_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|184546
NZ_CP045643.1\|WP_153293001.1\|4497191_4497692_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153293002.1\|4497831_4498902_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380650
NZ_CP045643.1\|WP_153289469.1\|4520378_4523702_+\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|379232

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153289471.1\|4526879_4531634_-\|hypothetical-protein	gnl\|CDD\|334197	pfam00656, Peptidase_C14, Caspase domain.	4.3474e-10
NZ_CP045643.1\|WP_153289458.1\|4501792_4503631_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP045643.1\|WP_153293003.1\|4516825_4517872_+\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|274824	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.	3.26774e-52
NZ_CP045643.1\|WP_153289460.1\|4504979_4507262_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	3.72349e-80
NZ_CP045643.1\|WP_153289461.1\|4507553_4509059_+\|hypothetical-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	2.92697e-06
NZ_CP045643.1\|WP_153289469.1\|4520378_4523702_+\|ATP/GTP-binding-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	5.63802e-08
NZ_CP045643.1\|WP_153289462.1\|4509417_4510446_+\|YIP1-family-protein	gnl\|CDD\|377418	pfam04893, Yip1, Yip1 domain. The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases.	4.31042e-13
NZ_CP045643.1\|WP_148012414.1\|4499461_4499908_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133387	cd01279, HTH_HspR-like, Helix-Turn-Helix DNA binding domain of HspR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator HspR and related proteins, N-terminal domain. Heat shock protein regulators (HspR) have been shown to regulate expression of specific regulons in response to high temperature or high osmolarity in Streptomyces and Helicobacter, respectively. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.09349e-44
NZ_CP045643.1\|WP_153289456.1\|4499912_4501100_-\|molecular-chaperone-DnaJ	gnl\|CDD\|237665	PRK14295, PRK14295, molecular chaperone DnaJ.	0
NZ_CP045643.1\|WP_153289467.1\|4518171_4518681_-\|phosphoribosyltransferase	gnl\|CDD\|225145	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only].	5.49698e-35
NZ_CP045643.1\|WP_153289470.1\|4524141_4526313_-\|hypothetical-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	3.92869e-09
NZ_CP045643.1\|WP_153289468.1\|4518691_4519267_-\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	9.56991e-97
NZ_CP045643.1\|WP_153289459.1\|4503726_4504746_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	3.7246e-30
NZ_CP045643.1\|WP_153289457.1\|4501133_4501796_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|184546	PRK14163, PRK14163, heat shock protein GrpE; Provisional.	6.04643e-115
NZ_CP045643.1\|WP_153289464.1\|4512387_4514979_+\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	1.64069e-24
NZ_CP045643.1\|WP_153293002.1\|4497831_4498902_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380650	cd19995, PBP1_ABC_xylose_binding-like, periplasmic xylose-like sugar-binding component of the ABC-type transport systems. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	5.11178e-94

>NZ_CP045643.1|WP_153289462.1|4509417_4510446_+|YIP1-family-protein
MSQLGPKARSAGPGPARHCARPGTFDYVAGFRIGRGRDNRAPQARPQQHQPSYGQQAPQGGREPYGYPPAPSRQQPYGGQPYGGGQQPYGRGQQGGGQQGGWPQAGGPGGGEPEYFGDGHPQQGPDPYAANSPGHTQAFSVGEDPYSQGETYRAGQAAAPPVGPRLHWKDLLKGIVTSPKQTFLQMRDYTMWAPALIVTFLYGLLAVFGFDGAREDAISATLSNAVPIVLTTAVAIVISTFILGVVTHTLARQLGGDGAWQPTVGLSMLIMSITDTPRLIVAMFFGGDASFVQLLGWVTWVAAGALLTLMVSRSHDLPWPKALAASAIQLIAILSIIKLGTF
>NZ_CP045643.1|WP_153289461.1|4507553_4509059_+|hypothetical-protein
MHKQHPYHRPRALQLALATATAAALTGGLLTFSAATASAADSTTVPAADFNGDGIGDVAFSASGAYVSGHKYAGQVVALYGTATGVSAAKRSTISQNTAGVPGTAEAGDAFGAETAYADFNGDGYDDLAVSSPHEKVGTDTDGGGLAVLWGSPSGLTGKAVTISDPATSSHDLWGKNLAAGDFDGDGKADLAVGSTSSTIYVYKGGITSGGAAGLARTTIKPPIQSGGTARGPLNLTAGDINGDGRTDLVVDGFETKTDYGWNTNYYVPGTANGLSVSAAKTLKTGIITAVGDINGDGFGDIVSGAPWDNTKLSDGTTPPDSAYGGKVNITYGSASGPASTAGISQSTGSVPGTAEKNDSFGYELDLGDINHDGYQDLVVSTAYEDLDGHADAGMVTVLYGSAQGVNTSSGAQAFAQSTPGVPGNDEKGDLFGVDVKLDDVTGDGRADLLVGSYENAGDGTITYLPSNGTKITTTGSRSVWPADAGVSTTGSPAFGANFAD
>NZ_CP045643.1|WP_153289460.1|4504979_4507262_+|4Fe-4S-dicluster-domain-containing-protein
MQLAAIIVSLTLTVVGVALIARAVAQIYRFIKLGQPLPAGSRTDAWKARSITLAKEFVGHTRMNRWGIVGVAHWFVAVGFLTLGLTIVTAYGQLFKADWTLPVLGDWLPYELYTEFIALFTTLGILVLIAIRQLNRPSKPGRKSRFAGSKTGQAYFVEAVILVIGLAIMTLRGLEGAIHGVHHYEAAYWASYPLVAAFKGLSLGTLQTLVYLTAMIKLGVTMGWAITVGLNTNMGVAWHRFLAFPNIWFKRNADGATALGGLLPMTSGGKDIDFTDPGDDDVFGVSQVEQFSWKGLLDFSTCTECGRCQSQCPAWNTGKPLSPKLLIMSLRDHAHAKAPYLLAGGGKDMEGNEKASAEALADVPAAALAEAERPLIGTAEENGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQVMIESAFPSEAGTMLKNLEKKGNPWGLAKKQRLEWTKEVDFEIPVVGRDIEDLTEVEYLYWVGCAGALEDRAKKTTKAFAELLHMAGVKFAIMGGDEKCTGDSARRLGNEPLFQELGMENVAALNMAFGEETDDEGNTTPESRKPKSAKKIVATCPHCLNTIGNEYPQLGGDYEVIHHTQLLQHLIDEGKLLPVTPVEGLITYHDPCYLGRHNKIYTPPREIMSAVPGLRQQEMHRHKERGFCCGAGGARMWMEERIGKRINNERVDEALSLNPDIVSTACPFCLVMLTDSVNGKKNDGKAKESVQVVDVAQLLLDSVRTPVDPAGAAEAESEPEPEPVK
>NZ_CP045643.1|WP_153289459.1|4503726_4504746_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MLYGIAAATAALFLAAVLAALLRSLALRLGAVERRQGRVVALLGGPAVIVATAFVAGVGDWTGVAPLGPAAGRLLVAGVGVGALGLVADLRPVPLPVRAAVVTAAAALTVPFEVLGLPVGVVAVGWIVLVAHAFTCLDHADGVMGTVAVVTAFALSGCAAAEVMDGPATLLSVLAAALTGLLMHGRLPARIVPGRCGGLFAGFVLASAAVLVHAGREAGPGVGAVFALTVVATADAALVLVSRRRAGRPLSRGAQDHLVHRLRHLGLTARGAAVLVGATGFAGALVGMLIDLRWVGATAALWVAGGAVVAVLILLRVPADGANVPGKPQVGGHLRVRNR
>NZ_CP045643.1|WP_153289458.1|4501792_4503631_-|molecular-chaperone-DnaK
MARAVGIDLGTTNSVVSVLEGGEPTVITNAEGARTTPSVVAFAKNGEVLVGEVAKRQAVTNVDRTIRSVKRHMGTDWKIELDGKHFNPQQMSAFILQKLKRDAEAYLGEKVTDAVITVPAYFNDSERQATKEAGEIAGLNVLRIVNEPTAAALAYGLDKDDQTILVFDLGGGTFDVSLLEIGDGVVEVKATNGDNHLGGDDWDQRVVDYLVQQFRSGHGVDLAKDKMALQRLREAAEKAKIELSSSTETSINLPYITASAEGPLHLDEKLTRAQFQQLTADLLERCKTPFHNVIKDAGINLSEIDHVVLVGGSTRMPAVAELVKELTGGNEANKGVNPDEVVAIGAALQAGVLKGEVKDVLLLDVTPLSLGIETKGGIMTKLIERNTTIPTKRSEIFTTAEDNQPSVQIQVYQGEREIAAYNKKLGMFELTGLPPAPRGVPQIEVAFDIDANGIMHVTAKDLGTGKEQKMTVTGGSSLPKDEVNRMREEAEKYAEEDHARREAAESRNQGEQLVYQTEKFLKDNEDKVPGDVKTEVEASVEELKAALKGEDTAEIRTATEKVAAVSQKLGQAMYADAQAGGAEGAAGADQARAEDDVVDAEIVDEDRKDGAA
>NZ_CP045643.1|WP_153289457.1|4501133_4501796_-|nucleotide-exchange-factor-GrpE
MTEETPGFEEKPDVPSGATPDDAEPKDAPSAEGASPAGDASAAAQTAGLTAQLDQVRTALGERTADLQRLQAEYQNYRRRVERDRIAVKELAIASLLTELLPVLDDIGRAREHGELVGGFKSVAESLETVAAKMGLQQFGKEGEPFDPMIHEALMHSYAPDVTETTCVAILQPGYRFGERTIRPARVAVAEPQPGAQSVKSDDTTAEAADDKESGGPDEG
>NZ_CP045643.1|WP_153289456.1|4499912_4501100_-|molecular-chaperone-DnaJ
MSTKDFIEKDYYKVLGVPKDATEAEIKKAYRKLAREFHPDANKGNAKAEERFKEISEANDILGDAKKRKEYDEARALFGNGGFRPGPGAGGGNFNFDLGDLFGGGAQGGAGGGAGGFGGGIGDVFGGLFNRGGAGTGTRTQPRRGQDIDTEVTLSFTEAVDGATVPLRMTSQSPCKACSGTGDKNGTPRVCPTCVGTGQVARGSGGGFSLTDPCPDCKGRGLIAEHPCLECSGSGRAKSSRTMQVRIPAGVTDSQRIRLRGKGGPGERGGPAGDLYVTVHVDAHPVFGRKGDNLTVTVPVTFAEAALGGEVRVPTLGGPPVTLKLPPGTPNGRTMRARGKGAVRKDGTRGDLLVTVEVSVPTDVSGKARDALEAYREATADEDPRAELFQAAKGA
>NZ_CP045643.1|WP_148012414.1|4499461_4499908_-|MerR-family-transcriptional-regulator
MDGRRRNPYELTEETPVYVISVAAQLSGLHPQTLRQYDRLGLVSPDRTPGRGRRYSARDIELLRTVQQLSQDEGINLAGIKRIIELENQVAALQSRVVELESALDGAAATMRQREAAVHASYRRDLVPYQEVQQTSALVVWRPKRSPE
>NZ_CP045643.1|WP_153293002.1|4497831_4498902_-|substrate-binding-domain-containing-protein
MAVSLAGCGVVDGIGGSDSKASPTKGDDIKVGLLLPEKANTRYEKFDHPIIEQQVKKLTNGKGRVLSANAEQSASKQNIQLQQMVDDKVDVLLVDAVDSKAIASGVRKAKAAGIPVIAYDRLAEGPIDAYISFDNELVGEVQAKELLKAMGSNAATKQIVMMNGAVTDPNAAQFKAGAMSVLDGKVQIARKYDTKDWDPANAKSNMLEAISAMGASNIAGVYAANDGIAGAVIDAMKTVGVSNLPPVTGQDAELDAVQRILAGDQYMSVYKSYPQEATAAAEMAVAKVQGRGIEFDALTRDKVDSPTTQKIPAQLVPVVALSKDNIQETVLQDNIYKVSEICTAKYKAACAAAHIK
>NZ_CP045643.1|WP_153293001.1|4497191_4497692_-|hypothetical-protein
MAMIGLFWITEESVYVGAEPAGNGRGVRLTPEGLEAVGTGQKGFWAWRDVRAVTVHDAQVRSSTRWLVNSVMDTMLDVATGGGEAPPAFELHVRTDAEKTGLTVYTAAVGGYVQSEYELSLDLLDRFVEGTADVARLLEWGSAEGGGVTPWRAAREALLRSWAAAT
>NZ_CP045643.1|WP_153289464.1|4512387_4514979_+|AAA-family-ATPase
MDLLEREAVLQDLAGHLQAAVSGPGRLALVRGEAGIGKTTVVHHLARQADPSIRVLVGACDPLATPRPLGPLMDLAPRLGPAVRTGLTGALAGTCRSDEVFDCLLADLTASPSLLVVEDVHWADEATMDLLRYLARRLTSVPSLVVATYRDDEVGRTHHLTALLGTLAGYPWVYRHDLAPLSRSAVARLATGHAVDAEQLHHLSAGNPFIVTEILAAPAETIPATVREAVAGRLAGLSAAARTVVDVLAVLGHRVSPPLLAGVLPAPEEALEEAVACGIVRTVGQATEFRHELTRLAVLEAVPAASRLRIHRQALTAMRSGPVTADDLALLADHSEAAGDPAAVLEYAPAAADHAAATDAHREAAAQYARALRYADSLPSDRQTSLLEGHAQACLLSGRLDEGVESCRTAVRLHRAAGDRPREGDNLRRLSYWLWAAGRTAESRQTALDAMRMLDGLGPSRELAWAHLNLCQLACYEHEAVAETDSHAEKAIALGERFGDTEVVVQARFHAAAARMLSEGHGWEDCERAVDSAMAQDPPADAGSLALVMCWFAALQRDVDRTAAAVSRAEAHCLDHDLLFHLLSSRAWGSWGLLNRGSWTQAADAAQEVLSHPHSPPVVRALTLTVLGLVRARQGEVQVWPLLDQAASLVDANCLTATGLGWEARVEAAWLAGDDERVRAEARRGLDASQDRSHPWLSGPLACWIRRAGGTPPRVPAAGPHALELAGDWSGAAALWDTLGCPYDAALARLSGDAPALHQALAVFESLGARSAVARTRAVMRSRGVRPIRRGPRAATRANPYGLTNRELDVLKLLNEDLSDAEIAARLYITPKTAGHHVGAVLNKLGVHTRHEAARKLHHSDRR
>NZ_CP045643.1|WP_153289465.1|4515139_4515469_+|hypothetical-protein
MKKAFLRSVGLTAACCCMALGAWSTSAGEADALSQKSQAAFTKSALQCYATHGSPNDIVCYRNSWKAEFRHGEVVYVPILIQVPAPANPPSVTTVDSLNDIHPSTTSPG
>NZ_CP045643.1|WP_153289466.1|4515558_4516053_-|hypothetical-protein
MSTLAGAVVGVSSALIAERIRWRRDQQRDGSQTRRVVYSEFLMALSRGHSDMRTVVLQVDRSTGDRLYGDLHQALDGSGVWRFRQSLSLTASAEIIQLAVKACDALTRMRDGLIEDPDVRGDAYFRIRADLWRENARLREAMRKDLGMDGPPDPEVGQYRYPTT
>NZ_CP045643.1|WP_153293003.1|4516825_4517872_+|beta-propeller-fold-lactonase-family-protein
MVAPQPAQAVPPGTYAYVTNFNANTVSVINTRTNTVAVMVPVGNAPWEVAVSPNGTRTYVTNRADDTVSVINTATDTVVATVPVGLEPLGVAVSPDGTRAYVTNFSANTVSVIKTKTNTVVATIPVGAAPIGVAVSPNGTRAYVTNSDADTVSVIKTKTNTVVATIPVGAFPFGVAVSPNGTRAYVTNLNDDTASVIKTKTNTVVATIPVGDAPQGVAVSPNGTRAYVVNADAGTVSVIKTKTNTVVATIPVGAAPREVAVSPNGTRAYVTNANADTVSVIKTATNTVGATIPVGDLPFGVAIGVVPCPGHGKPGHGKPDHGKPGHGKPGHDRSTTATVPASGNCTPA
>NZ_CP045643.1|WP_153289467.1|4518171_4518681_-|phosphoribosyltransferase
MTAARENLTYERFGTAVRELAQTIVDDGYEPDIVLSIARGGVFVAGGLAYALDCKNIHLVNVEFYTGVGTTLEMPVMLAPVPNVIDFSDKKVLITDDVADTGKTLKLVHDFCVDTVAEVRSAVIYEKPHSLVKCEYVWKRTDEWINFPWSVLPVVRKSGEPITPSKEAL
>NZ_CP045643.1|WP_153289468.1|4518691_4519267_-|dCTP-deaminase
MLLSDKDIRAEIDAGRVRIDPYDESMVQPSSVDVRLDRYFRVFENHRYPHIDPAIEQADLTRLVEPEGDEPFILHPGEFVLASTYEVITLPDDLASRLEGKSSLGRLGLVTHSTAGFIDPGFSGHVTLELSNLATLPIKLWPGMKIGQLCMFQLSSPAEFPYGSDRYGSRYQGQRGPTASRSFLNFHRTQV
>NZ_CP045643.1|WP_153289469.1|4520378_4523702_+|ATP/GTP-binding-protein
MPSSCLSGGTVARLGRPRHRPTLGSRSARLGPPTVRTAAVLATALALSLPLVAVPSSAAAAPQPAPAAGEFVLPAAPRAVPRATQILNAGTSGFLWAQEGDDRLLWTDYATGAATALEQRLDVPVQYDIDSGYFREAASSRPGYYGDGSDTVALYSEEDSQVTLLQGAGASGGTTVVPVPEYHTYQGTFGSTVVTSTSGVNGNPNAYQLWRVEDGGGVGQTPVTGLPDGAGNIVVDDGDARSVILRYDTDEDSWGHWGIVDLATGAFSTLPDRVDPEDGWEVTGFRLGADSVLRLRSGRGKADVYDRDDLSAPARTFDTGALSYEAAYGIVGDKLLGVEPVSPGDNKYRGQPLWALTSDGTDTDLIKVMDPAAHQIVQAPDGSVLVAGAEQYVEQGDLDWGVHRIALATDGSLTRSRLSAVRPMPARINGLSLGSGILTTADNSTLYEPGTIIGAYRSTWLTTSGTPGVARTTVDGLVSGRDGDCAADATRCIPMFADGTGRHGRRDATESGLTMLRTNGATAWGPTLDTGDDSPELNDLSGRYAVIDGASSGDQYISEFPDGSAGKVLQERDGVAAAVWGNTLWSGAATGGKVTATRLPSGTVVESFTTRNGCTPSSLQAVGRWVYWTCVDSWGDVQGSGVYDRAAKRTATAPAGRVLLGDGYLVQHIGGTNSDSGLTLFDLHGGLPSSGSSTDLPSRKLVNWTELGRYGTGVSGIRTSWTVDRFGGGVAYADDEQRVHLVPTGVPASALSAIDSTVTSGPASWSGTWWLSKPAASWKATVRHKASGATVRTVSGSAARGLLKAAWDGKDSAGRLVTNGAYTWTLTAQPADGQGAALTISGTIAVTAGAAARRDYAGNDGVGDVLTLNSSGTLTIQRGTGTGTLGSKVSGAGWPTTARFVPFGDLSGDRCNDVLVRLSSGALRAYRPACGKAATPSTPYTSLEPSDWGQYDVLTSPGDVSGDGRPDLIARNASTGTVYLYKGTSTGKLSARVKLYDNWKTYKKVVGAGDLNGDGIDDLLAQDKSNILYRYEGTGRGTFKARVKVFSNWGASYNAVVGVGDITGDGRADLVSRDTSGNLYRNNGDGKGSFGGRTKIATGWQGYKAVV
>NZ_CP045643.1|WP_153289470.1|4524141_4526313_-|hypothetical-protein
MTSQFRAVLGIALTPVLALAAAAPAAAHTTAAVAATGTTATATGTASAAVETGAPGPWGTRTTHAPNPDPVSASGGVSTLESAGNGALVSLTGDGPSRSTRIRPAGSTRWLAPQTWPGAGGYNTELVSLGDGSVRLVWRAERADDHNNYWLKVATLTPGATAFSEPEYVAAVPEKGYHHLAAAPDGRLVAVWSVSGVVKAAEKAGPRAAWTAPADLNAQPPSGSRNISAMDLAVAKDGTALLVWQWQASKAVVALEKAPGASAWTAVQGFPVPGVDLARPKVFADPQGGFDVFYDDTAHLMHTRRPVGATQWSPPRSAANYGSTYGMTAPVYLPDGDLFVAGGPGYSTGPWYAVRSAATGAWQPYTQPFSTHKKVRAVDAAATSGGTVTVTWREGYSSEEYTMAAVFKGGTWSAPRRLSATSAQFTGVPLVAADELGRPVVLWDEYKRTETNSFVLDGVYQATTTSRALPKWRDYTDDGKADLFGRNSTGLKVYAGDATKLSAGQRASGWPTGTLVLPFGDLDGDRCDDVFVRYPNGEARVYPTICGGLPDQQSFHVKVSSDWSGYDAVVSPGDMTGDGRADLLTRSASTGKLYLYANNGAGGFKARSLAGSGFGGYKRLIAAGDLDGDGKNDLLAIDASNELWRFRGTGAGTFTPRSLVFKDWGTSYKDVVGGLDLSGDGRADLISLDKDGRAWLNRGNGHGGFDNRSQVGKATNWSDIRIS
>NZ_CP045643.1|WP_153289471.1|4526879_4531634_-|hypothetical-protein
MVGEYRALLIGVHQYCEDSDFGLLKGPPNDLREMDRVLRDPVSGLFTVKGRLLNPKTGDLRIGVQKFLDGASRDDHLLLYYSGHGETSSRKRQLCLTSAESSRATLDSSGLSFDECYEWITDSPARSVTVILDCCRSGVAVKSGGPDFGEVEALFSGEEEPQSKTVKVLAAGTGYQTTADADSDDGTSPFTARLIAALTDSAQADELGLVSFDSVVAAMKATQNDSTPRLQAWGTHQDGGGPYLAQRAGHARHAMEQAGLKEMAFSRRGGAEYDGRTVHVRVAQVERIAMQLADRSPTTMFVSGPLGTGKTWILCDVIDRLTDEDWEIRTFLPSREPEDAHKLLTALRTYAAQLRASTDKLCLVVIDGIEWSDIWAEFVIGLQDLTERDDLGVGVLASLEIQRGQIQPDHEHKSWQVSGDRLVQPVVARSATEFIAEVLSAAWNPHVADWSADRLNRARNSLQELIGTDLWAATRLGPLWHASDAEEQVIRAVWEERLGPVSPAQSAALRKVAALGRFNLWCPLADALNAGDALVRLGPEFSERNEAVRLNSGFLCRAILARRESGGRVSYSYERRAADPVARQVITQHLSAMLLASHRQKDVITTLSRLRYDRRVFTDVVRKLSQGSARRPSAWDTWAEGWEDLAPVVHILSYLRTALPPAQAGELGDRLCQHVVDQAHDDLPLPVVVAALELLRDINRGRRRPAAFTEARDRLTDIAERQLAEHRWPAALRRRLLRLLRQMKWLTEENIERVGPLLLRPASPSVPEDLKIVFDFVRTVSRGRTTDALRAALATWDVVTEDLVRAPEEGNKPSGPERLAVRGILARYVYDDEFADDLLRQLMVALRKATAWQLNETLVASARLDKRFAADIVGRLDVDTWSTGVYRNAPPIAVAKLLSTLGNIRADIAVRTLYRADGTADTALADELAAPMRDDGDAVSASMLLKAAVRCEEQRGLLEGGFAQYLSHALGADFLADTLAHNTRLTIVNHLVEGYAKARTPLIESVRDEALCVVEDQIEHSGSEVGPRLALILSDEDALGQSFVTELITRGVIRRSTILARMLHIHNPGALAAFHELGVALFPGIETDFVNGVEASGHSWTQTRMFDNLADEGNVILALRAARSVAATLVLSGRHDAGGVILDAYQRAYQTGHPGQEWSRRVLEADDIELAEGIRLLRSLRAADARRVTEENLFRLSQAVRRSSPRVLADLLAAVAEVSSEAGERLLAMCQEAELLNDAFDDLIVDGDLFSQAASLYGLTTVEDRLYTRVVPTEMAERFHQDWTLQIQVINNPGLVQTLMRVAGNSGPGAALSVVRVVNIGSLRRRLERRNRGDAGGFTQLICILAELAPHLLSDLVDLDDARWLMWEAPMNLLGGLAESLAAAGVATEADISGMLALRLNVASEKVPRRQLSGYLLGAGWAAWTVARLGGRLRLDHMFSMWTANSVVPQHLLWALAWFEQDAWMQPLMNEAFEALSRRDGPPESPGAAAAILTVCEALDREPPRYDSADSLASWGHALRAEPAWIRALLASARQGGPVHTALRQEWAPWGTQRLQASLRWRAHDWRSVPGEALSDLLRLTRDA
>NZ_CP045643.1|WP_153289472.1|4531637_4532027_-|hypothetical-protein
MESIRTRAEVRIEAASQQYARTDPAFLEQVLELRTDLSRAGVEVLDGDGAGKKGIGEIEPVVQAVVFGGPGLVALCGVAKVWLRQRGHRVLRITVRDSVGDEHVVLAEGKNVSDEMLLAFSRDVGKRLG

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Crispr_ID: NZ_CP045643_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_12

6297655-6297741

Orphan

Consensus_repeat	Method
GAGGGGGCCGGAGCGGAGCCGGAGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_12

>merge|NZ_CP045643|12|6297655-6297741|CRISPRCasFinder
GAGGGGGCCGGAGCGGAGCCGGAGAGTCCGGAACGGAGCCGGAGGGGGCCGGAGCGGAGCCGGAGAGTCCGGAACGGAGCGGGAGGG

>NZ_CP045643|12|10|6297655-6297741|CRISPRCasFinder
GAGGGGGCCGGAGCGGAGCCGGAGAG	TCCGGAACGGAGCCGGAGGGGGCCGGAGCGGAGCC
GGAGAGTCCGGAACGGAGCGGGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153290750.1\|6308593_6309199_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153290745.1\|6300561_6301599_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|336482
NZ_CP045643.1\|WP_153290751.1\|6309378_6310155_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224332
NZ_CP045643.1\|WP_153290746.1\|6302393_6303734_-\|acetyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|223848
NZ_CP045643.1\|WP_153290735.1\|6283446_6284361_+\|sirohydrochlorin-chelatase	unknown	unknown	gnl\|CDD\|225049
NZ_CP045643.1\|WP_153290740.1\|6290976_6292905_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP045643.1\|WP_153290748.1\|6306412_6307630_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153290734.1\|6282480_6283209_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225500
NZ_CP045643.1\|WP_153290749.1\|6307701_6308613_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223267
NZ_CP045643.1\|WP_153290743.1\|6296448_6296754_-\|YtxH-domain-containing-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153290738.1\|6287202_6289113_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP045643.1\|WP_153290736.1\|6284423_6285797_+\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
NZ_CP045643.1\|WP_153290739.1\|6289360_6290653_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP045643.1\|WP_153290742.1\|6294841_6296296_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|198375
NZ_CP045643.1\|WP_153290741.1\|6292904_6294638_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP045643.1\|WP_153293130.1\|6305866_6306406_+\|toxin-antitoxin-system,-toxin-component-family-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153290737.1\|6285890_6287156_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
NZ_CP045643.1\|WP_153290747.1\|6303726_6305295_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236096
NZ_CP045643.1\|WP_153293129.1\|6298026_6298776_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP045643.1\|WP_153290744.1\|6298952_6300497_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153290745.1\|6300561_6301599_-\|rod-shape-determining-protein	gnl\|CDD\|336482	pfam06723, MreB_Mbl, MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.	2.99705e-142
NZ_CP045643.1\|WP_153290751.1\|6309378_6310155_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	3.24025e-69
NZ_CP045643.1\|WP_153290746.1\|6302393_6303734_-\|acetyl-CoA-carboxylase	gnl\|CDD\|223848	COG0777, AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism].	3.18011e-50
NZ_CP045643.1\|WP_153290735.1\|6283446_6284361_+\|sirohydrochlorin-chelatase	gnl\|CDD\|225049	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism].	3.0841e-28
NZ_CP045643.1\|WP_153290740.1\|6290976_6292905_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP045643.1\|WP_153290734.1\|6282480_6283209_-\|hypothetical-protein	gnl\|CDD\|225500	COG2949, SanA, Uncharacterized membrane protein [Function unknown].	2.99873e-52
NZ_CP045643.1\|WP_153290749.1\|6307701_6308613_+\|hypothetical-protein	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	0.00152354
NZ_CP045643.1\|WP_153290738.1\|6287202_6289113_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP045643.1\|WP_153290736.1\|6284423_6285797_+\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP045643.1\|WP_153290739.1\|6289360_6290653_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	3.07776e-164
NZ_CP045643.1\|WP_153290742.1\|6294841_6296296_-\|sugar-kinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	6.79432e-115
NZ_CP045643.1\|WP_153290741.1\|6292904_6294638_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.15662e-158
NZ_CP045643.1\|WP_153290737.1\|6285890_6287156_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	3.60757e-73
NZ_CP045643.1\|WP_153290747.1\|6303726_6305295_-\|AMP-binding-protein	gnl\|CDD\|236096	PRK07787, PRK07787, acyl-CoA synthetase; Validated.	0
NZ_CP045643.1\|WP_153293129.1\|6298026_6298776_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.73245e-49
NZ_CP045643.1\|WP_153290744.1\|6298952_6300497_-\|GAF-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.38805e-15

>NZ_CP045643.1|WP_153290743.1|6296448_6296754_-|YtxH-domain-containing-protein
MRYRLTFVAGLAVGYVLGTRAGRERYEQLKKSARQLAQNPAVRNTAETAAQQGRQAAGKAYHAVSEKMGDHVPASVTQRVRSLRERNTNGAGEDDWGTTNT
>NZ_CP045643.1|WP_153290742.1|6294841_6296296_-|sugar-kinase
MGIVAGLDSSPDFTRIVVCDTDTGAVLRQGYAPHPVESTEGGGRPSDVDPQAWLLSLGEAAGGGLLEGVQAIGVSAQQNGLVPLDAQGNTVRPALVGGDKRAQVAAADLIDALGGREAWAQAVGCVPQAAQPVTKLRWLSRTEPDAAQRTALLLQAHDWLVWQLLGRPMRRTTDRGGASGTGYWSAATGAYRPDLVDLALGHQATLPEVLGPSEAAGTTPEGLLISAGTGETMAAAFGLGIGLGDAVVSLGASGSVMAVHTEALADPSGMITSLADATGLHLPVVTTLNAVRTLRGATELLGLSDLESLSELAMKSTPGSHGLVLLPYLEGERTPNLPHTAGTLSGLRRESMRPEHLARAAFEGMLCGLADALDVLRGRGVDVRRVFLLGAAAELPAVQAAAPALFGAQVVVPQPADYAALGAARQAAWALGVSQGTLDPRLPPVWQGAVAQVLEPGEELAVGQAVRQQYVSVREQTHPGAFRA
>NZ_CP045643.1|WP_153290741.1|6292904_6294638_-|ATP-binding-cassette-domain-containing-protein
MLIRLLRTYLSPYKKPISLLVFLQFLQTCATLYLPTLNAHIIDNGVVKGDTGYILSFGALMIGISLVQVFCNIGAVYYGARTASAVGRDIRAAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLALMTFTLLVSAPIMCVGGIVLALGLDVPLSAILVAVVPLLGIGVTLIVRRLRPLFRTMQVRLDTVNRVLREQITGNRVIRAFVRDDYEKDRFRGANTELTKMSLATGRMLALMFPMVMTVVNLSSIAVVWFGAHRIASGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTSSSVVPPTAPVLELRRHGHLEIRGAGFRYPGAEEPVLKSIDLVARPGEVTAVIGSTGSGKSTLLGLVPRLFDATDGQVLVDGEDVASVEPQLLARTVGLVPQKPYLFAGTVASNLRYGNPDATDEELWHALEVAQAKGFVEQLDNGLHSAIAQGGTNVSGGQRQRLAIARTLVQRPEIYLFDDSFSALDYATDAALRAALSEETAEATVVIVAQRVSTIRDADRIVVLDEGRVVGTGRHHELMADNETYREIVLSQLTEAEAA
>NZ_CP045643.1|WP_153290740.1|6290976_6292905_-|ATP-binding-cassette-domain-containing-protein
MAGPMGRMMAGGGPDQRSLDFKGSGKRLLAQFKPERVTLYVMLCAVVLSVGLSVVGPKILGKATDLVFAGIIGRQMPAGSSKAEVLAGMRARGDGGMADMLSGTDFTPGKGIDFGAVGDVLLLALCTFLVAGLLMAVATRLVNRAVNKTVFHMREDLQAKLSRLPLSYFDKRQRGEVLSRATNDLDNIQQTLQQSMGQLVNSLLTIVGVLVMMFWVSWLLALVALVTVPISFFVATRIGKRSQPHFVQQWRVTGKLNAHIEEMYTGHTLVKVFGRQEESAAQFAEQNEELYEAGFKAQFNSGVMQPLMMFVSNLNYVLVAVVGGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANMVQSGVASAERVFELLDAEEQAADPVPAARPDELRGRVALQNVSFRYDPERPLIEDLSLKVEPGHTVAIVGPTGAGKTTLVNLLMRFYDVTGGRVTLDGVDIASMSRDELRSAIGMVLQDTWLFGGTIAENIAYGASRDVTRGEIEEAARAAHADRFVRTLPDGYDTVIDDEGSGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMAKLAHGRTSFVIAHRLSTIRDADTILVMEDGSIVEQGAHAELLAAGGAYARLYQAQFAQAVAEVD
>NZ_CP045643.1|WP_153290739.1|6289360_6290653_+|sigma-70-family-RNA-polymerase-sigma-factor
MPESSERGRPARGGFPIPAVPPNDYGMDSGEAAAPIPDVPLPHASAATFLEVAPVQTQTLTQTDNPTDTEPGAVAALPPQSRAAHHPEAEPEEAPPEPDGPPPDAVDVETEAPEPVEPLRTRTADTGGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEERLRLATDLDSQLALDLDKLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAAHLDLPSERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
>NZ_CP045643.1|WP_153290738.1|6287202_6289113_+|DNA-primase
MAGRINDEDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTITFVMKVDHLSFSEAVERLAGQAGITLRYEEGGYNPSHQRGERIRLVEAHKAAAQFYIDQLDTSPEADTGRKFLAERGFDQAAAAHFGVGYSPQGWDHLTRYLRGKGFSDKELLLSGLSQEGRRGPIDRFRGRLMWPIRDIGGEVVGFGARKLYEADNGPKYLNTPDTAIYRKSQVLYGIDLAKKEIAKTSRAVVVEGYTDVMACHLAGITTAIATCGTAFGGDHIKILRRLLMDNGSARVIFTFDGDSAGQKAALRAFEDDQKFAAETYIAVAPDGMDPCELRLAKGDEAVADLVEPRTPLFEFALRHIVARYDLETPAGRASALDEAAPVVARIKNTGAQHEVAVQLAGMLGILDTQFVVKRVAQLARWARDRGGKGPAGPAPAGQRPQQTYAAVQTPHGGPALNLRNPVFATERELLKLALQRPELVSPAFDAYGIDEFTAPPYAAVRQAIMEAGGAEYGAQDPQEYLVLVREAAPDNTVRAMVTELAVEAIMRKTVDETYAGDQLVMVRRRAVERRVVDVQGALARASAHGDPAQLTAVQNELWVLQQYGQALRERGAEAL
>NZ_CP045643.1|WP_153290737.1|6285890_6287156_+|NAD(P)/FAD-dependent-oxidoreductase
MVDADQTFVIVGGGLAGAKAAETLRAEGFTGRVILICDERDHPYERPPLSKGYLLGKEERDSVFVHEPAWYAQNDVELHLGQTVDAIDRTAKTVRFGDDGTLVHYDKLLLATGAEPRRLDIAGTDLAGVHHLRRLAHAERLKGVLAALGRDNGHIVIAGAGWIGLEVAAAAREYGAEVTVVEPEATPLHSVLGPELGQLFTELHREHGVRFHFGARLTEIVGQDGMVLAARTDDGEEHPAHDVLAAIGAAPRTGLAEAAGLEIAPRAQGGGIAVDERLRTSDPDIHAAGDVAAFPHPLFGTRLRVEHWANALNGGPAAARAMLGRETTYDRVPYFFSDQYDVGLEYSGWAPPGTYDQVVIRGDAGKRQFIAFWLKDGRVLAGMNVNVWDVTEPIQQLIRSRAQVDAEALADPHVPLDSLLP
>NZ_CP045643.1|WP_153290736.1|6284423_6285797_+|deoxyguanosinetriphosphate-triphosphohydrolase
MEGTAPKAFEHHPGPEEYDESAVERWAAEPDKRPGRTAFQRDRARVLHSSALRRLAGKTQVVTPGTLPQGLDSARTGGTLDRAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVEAACLSHDLGHPPFGHNGEQALNEFARDCGGFEGNAQSLRLLARIEPKRFVPSKETGELVSVGLNLTRATLDAATKYPWPRGAHPTAPGSPKFGVYEDDRPVFDWIREGAPPTRTCFEAQVMDWADDVAYSVHDVEDGLHAGHIDPGCLYAEPERQEIFAVAVGRYVSADTDPAELAEALDRLLDQDWWPHGYDGSAIAQARLKDATSQLIGRFCLAAEGATRTTYGLGRLTRYGAELVVPRAARLECAVLKAVADRYVMQRAEQELLRADQRIVVAELAEALTARAPDGLDPQFRALFDEAPDDRARKRVIVDQIASLTDASARSLHLRLTTRPTAGGGV
>NZ_CP045643.1|WP_153290735.1|6283446_6284361_+|sirohydrochlorin-chelatase
MTASQPPHDEPPTGTGARLLPGAPLDSTAQLMRAITSRLGSRLGLVALDGTPRPARPPLVLVAHGSRDPRALATVSALAERVREMRPHLSVRLGHIELDEPLLAATLASIDTARDPRAVLVPLLLSRGHHVKRDVPDAVAAVPGLRARVATPLGPHPLLVETLYARLVEAGWHTRTSDAARRGSGVVLAAAGSRDPEAALDTRHTARLLAERLGVPVVAAYASAATPTVPAAVRAMAARGRHRVAVASYFTAPGRFATACAEAAPWIAAAPLGAHPAMARLVLHRYDQALATPEPASERELAAT
>NZ_CP045643.1|WP_153290734.1|6282480_6283209_-|hypothetical-protein
MLRLPRPSTRRPSSARLKRLPRLPRTRAGQRRAVQVIMLLCVLALLPATWLYVVTGDRLRTTADVPRTGVAVVFGAGLWDGEPSPYLAHRLDAAARLYRAGRIEVVLVTGDNSREDYDEPDAMRAYLTRHGVPDGRIVSDYAGFDTWDSCVRARKIFGIHEAVLISQGFHIRRAVELCRAAGVRSYGVGVDAKHDVTWYYGGAREVFAAGKALLDVVFEPDPRFLGRKEPGVARALAAAGAR
>NZ_CP045643.1|WP_153293129.1|6298026_6298776_-|SDR-family-oxidoreductase
MTQRRVVVSGGGTGIGLATAEAFAADGDRLVLLGRREEVLRKAADALNGRFGESTATWCAADLADPEQVGTVRDFVTADETPVDVLVANAGGNAAAAHDGTLASIADGYRRNFDANVLTAVLLTEALLPHIRRPGGRVVQLSSIASLRGTGSYGGSKGWINTYTYDLAQRVGPEGITVNAVAPGFVGDTEFFGDRATPEFVASRVAQSLTGQPGHPSEIAAAVRYVASPEAAYLTGQLLHINGGAALGR
>NZ_CP045643.1|WP_153290744.1|6298952_6300497_-|GAF-domain-containing-protein
MTDPVPRLPALLEAVLCVGSDLELRATLQHIVDAAADLTGARSAALDITDPGDAGLLEIRTARPPSAGPDRHPRERPADALGVPILVDDAAFGNLYVAGRRGGPFTDEDEQLLRMLATQAGVAIGNARLYETARQRERWIEGAAAVTTALLTGEDAADALTTVAERARMLADASAGLILQPTAEGGMKIVTAATPAAPGGPAAAGDPGDIVGTTIEPGSPLLRHLLAGEPVFIDDSATDPRLTTHVRHRFGPNMMLPLQSGGRLIGTLVLPRDRGGRPYSEAERLLAAQFASQAALALVLADAQHSRERLAVYEDRDRIARDLHDLVVQRLFATGMMLESTQRRSSGAAEAELREILGRAVDELQSTVQEVRTAIFALQQPPADAPTTLRGKVLRETASAAAALGFQPSTRFTGAVEALVPEPVVGHLLTALRRALTSAARRPGVSRVEVTVDATTRLPDGRPGVRLTVFHDGGTGKGGMVDDGAEEGDTNQGETSEGDTDGGTGTTVVWQSPL
>NZ_CP045643.1|WP_153290745.1|6300561_6301599_-|rod-shape-determining-protein
MTASLEQLRRCHFAVDLGAARTRVYVKGAGLVVDQPSVAAINTKNGALIAVGEFAEKMTGRTPDYIRVMRPVSGGTVVDIEMAQRMLRQLLGDKVRRTLRRKPRLRAAACTPHDADPLAQRATIETLVGLGARRVELVDTLIAAAVGCGLPVERPEATMIMVCGAAATQVAVLSLGSIVTAERIPVGGEAVDRAIVQHLRHQHELMLPSQSVRPLQLALSGNGLTPHGPTSTEIHGRDVATGLARSVQVDTAAVRDAIQTPLTAVLDGIGKVLRACPPDLVADLADRGIMMVGGSALLPGLDQMLRHATGMPVHIAERPDVCAVQGLGYMLEGKIEPLTLEPLPG
>NZ_CP045643.1|WP_153290746.1|6302393_6303734_-|acetyl-CoA-carboxylase
MTDRLPAREAIALVTDGFTELRVPIRHFRPDGPLAWQGYDEARSRAAARTGEDESVVCGSAVVGGTRVALIAFEFGFLGGSLGERTGDRLEAAYTHAREHRLPVVSLVATGGSRMQEGMLALTQLQRVARQSALTREAGLPQIAVVRDPTTGGGWATLGAGSDVTLALPGAQVGFAGSRVRPPGADPAAYTAEAQVASGAVDAVVPEESLRETLALWLALLSAPSAEAAPVPAALGAPGLPATGRDAVDRARSPERPRAEAYLDAYFSRRAAISGDRCGGTDPGVLCGFGSGPKGRTVAYAAQCGTATRPAGYRTAARLIRLAGRLGVPVLTLVDTPGAANDARAEREGAGSAIADLFAAVATARTPVTTLVIGEGGSGGALALAAPDNTWATPDSYFSVIAPELAAAILKRPANEVRATADQLRIRPQDLLDLGVVRGIADHAGK
>NZ_CP045643.1|WP_153290747.1|6303726_6305295_-|AMP-binding-protein
MSSLFPALVSGSTARRPALRFGDRSLTYAELAASAGALAARLEGRERIAVWATPSLETAVGVVAALLARVPAVPLNPKSGASELGHIVSDSAPSLVLAGEGDDLPSPVRELERLDVVTHPAGEVVARYPSEPDDPAAPALVVYTSGTTGPPKGAVVPRRAIASTLDALADAWRWTGDDVLVHGLPLFHVHGLVLGVLGPLRRGGAVRHLGRFSAEGVTRELNAGATMLFGVPTMYHRLAEALEGDAELAKALGRARLLVSGSAALPVHDHERITAATGRPVVERYGMTETLMNTSVRVDGPARPGTVGVPLPGVGLRLVEEDGSTLASYDADGTPTGSYDAGGNPTGAYDGESVGEIQVRGPNLFTEYLNRPDATAAAFTADGWFRTGDMAVRDADGCVRIVGRKATDLIKSGGYKIGAGEIENALLEHPAVREAAVTGEPDDDLGERIVAWVVTGDAPAPGLDRELADHVAGRLAPHKRPRSVRFLSALPRNDMGKILKRALPDALADSRPRTGPSDVSHD
>NZ_CP045643.1|WP_153293130.1|6305866_6306406_+|toxin-antitoxin-system,-toxin-component-family-protein
MRALAVELSRTLKRRLDTPVDVRELAGALCEEMSRRRDGRPVQLRFERFPDEIEVTGLWMEFHDFDLVIVEERAESVQQLVILGHELWHMSAGHAHSHHHFAGAAAARALSDDPRWQEIALTVAARNGSHEADEAEAEDFGLHLASVFRSWVTGSRPQGPADPVGRAIQASLGYRGPQD
>NZ_CP045643.1|WP_153290748.1|6306412_6307630_+|hypothetical-protein
MDPSHFLAGIYISFWIPIAVLAAALAIKLPSIVTLWKDPLLRAVGGLLVLACAVFVCAAPPTITWTNRVTGVPNISAPLLYSLVTAFGGSCLLMITTWRGGATDRSGATRRATRWIVGAYAGVIVALWVLFALADAPVERIRDLDTYYARTPFMRELIVLYLLAHTGACLITSKLIWNWIRTDGLDVWLRGGLKFLGVGYTVNLVYDATKAVAVGARWSGHDLDWLSTALAPPVASLSAVLIAVGFILPHAGQYLHRRARTRLGLWRLRPLYRLVRTVVGGRAPVRLRATPELRLMRRETFIRDALLHLARFLDEDRRRTAYEAAVALGFEAGRARALAHAVTVQDAVRTGRRTRRDDVTALLVDPDTGNLLAEIEAVSRALRRPGDIRAVRAVAAVPAERVPAR
>NZ_CP045643.1|WP_153290749.1|6307701_6308613_+|hypothetical-protein
MESAVARTAARPRIALATYRPEEGTASADRDLPVLKGALDDAGARAEIVYWDDPAADWADFDLVVIRSTWDYSWRVAEFVAWAERVAKLTRLANPAAVVRWNTDKRYLGELAASGVPTVPTRYLAPGDPADLPDGHEYVVKPTSGAGARLAARYRPEERETALRHLARMHEKGLTAMVQPYLRGVDTAGERALQFFGGRFLHAARKGAVLAPGTAYDADKVPHPRLEVWQPAPAELAVAERALAAVPDGPDGDALLYARVDVVDGDDGQPCVMELELVEPNLFLRLHPESVPVVAEAIIRAAR
>NZ_CP045643.1|WP_153290750.1|6308593_6309199_-|hypothetical-protein
MDPMPAKRPAGPFTPLDFQLVLLRRMADHNPDLVDDARRELGVSLADMREANRRWQAMLHAPRSRSAAHRYRSVLGTPESVTPRRIGDLACEALLWPVPLWPDLRFEVLALANGVVWNEWLVRAPGAAAPVLRTLDDLTPWSCTVDEAARAFAPARPLEGTAPTRWGLALTAPDASGVRRECAAEFTWGLLQRVAVSGRPG
>NZ_CP045643.1|WP_153290751.1|6309378_6310155_+|helix-turn-helix-domain-containing-protein
MGRLVPAVTRALDILELFLDGDGTLSAPDIVRRLQLPRTTVHELVTTLAARSYIVQMPGQPGRYRLGVRPYQLGSRYAEQLDLAAEGQQVARSVAETCDETVHVAILEGTDVIYIAKVDSTHAVRMVSAAGRRLPAHCTSVGKMLLASLPGPELASRIPDDADLSAMTPNSITEPGALREALAEIRRRGVAVESRESNPDVSCVAAPVRDRTGRVVAALSISVPMIRWSDERRAELEQLAAKGAAELSERLGHRSVAG

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Crispr_ID: NZ_CP045643_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_13

7130037-7131092

Orphan

Consensus_repeat	Method
TTCCGNCGNGACGACCGN	CRT

19 spacers

The CRISPR arrays of NZ_CP045643_13

>merge|NZ_CP045643|13|7130037-7131092|CRT
TTCCGACGTGACGACCGTCCCAGCGGGCCGCGTCGTGACGACCGTGACCGTGGTGGCTTCCGCAAGGACGGTGACCGGCCGGCCTTCCGCCGTGACGACCGCGGTGAGCGTCGTGAGGGGGATCGTCCGCCGTTCCGTCGTGACGAGCGTTCTGGCGGTGCGCCGCGTCGTGACGACGATCGTGGTGGCGGTTTCCGTCGTGACGACAACCGTGGCGGTAGCGGGAGTGGTGGCGGTTTCCGTCGTGACGACAACCGTGGCAGCAGCGGCGGCAGTGGCAGCAGTGGCGGTTTCCGTCGTGACGACAACCGTGGTGGCAGCGGCAGTGGTGGCGGGTTCCGTCGCGACGACCGACGTGACGATCGTCGGGGCGACGACCGCGGTGGTTTCCGTCGCGACGACCGCAACGACTTCCGGCGTGACGGTGACCGGCCGGCCTTCCGCCGCGACGACCGCGGTGAGCGTCGTGACGGGGATCGTCCGCCGTTCCGTCGTGACGAGCGTTCCGGCGGTGCGCCGCGTCGTGACGACGATCGTGGTGGCTTCCGTCGTGACGACAACCGTGGCGGTAGCGGGAGTGGTGGCGGTTTCCGTCGCGACGACAACCGTGGCAGCAGTGGCGGGTTCCGTCGCGACGACAACCGTGGTGGCAGCGGCAGTGGTGGCGGGTTCCGTCGCGACGACCGACGTGACGATCGTCGGGGCGACGACCGCGGTGGTTTCCGTCGCGACGACCGCAACGACTTCCGGCGTGACGGTGACCGGCCGGCCTTCCGCCGCGACGACCGCGGTGAGCGTCGTGACGGGGATCGTCCGCCGTTCCGTCGTGACGAGCGTTCCGGCGGTGCGCCGCGTCGTGACGACCGTGGCGACCGTCGCGAGGGGGAGCGTCCCGCCTTCCGCCGTGACGACCGCCGCGATGACCGCGGCGGCGACAGCCGGGGCGGCGGCTTCCGCGGGCGTGACGACCGCGGCCGTGACGACCGTGGGCGCGGAGGCCCGCGCCGTGACGACCGGGGTGGCCGTCCCGGTGGCTTCCAGGGCCGTGACGACCGG

>NZ_CP045643|13|2|7130037-7131092|CRT
TTCCGACGTGACGACCGT	CCCAGCGGGCCGCGTCGTGACGACCGTGACCGTGGTGGCTTCCGCAAGGACGGTGACCGGCCGGCC
TTCCGCCGTGACGACCGC	GGTGAGCGTCGTGAGGGGGATCGTCCGCCG
TTCCGTCGTGACGAGCGT	TCTGGCGGTGCGCCGCGTCGTGACGACGATCGTGGTGGCGGT
TTCCGTCGTGACGACAAC	CGTGGCGGTAGCGGGAGTGGTGGCGGT
TTCCGTCGTGACGACAAC	CGTGGCAGCAGCGGCGGCAGTGGCAGCAGTGGCGGT
TTCCGTCGTGACGACAAC	CGTGGTGGCAGCGGCAGTGGTGGCGGG
TTCCGTCGCGACGACCGA	CGTGACGATCGTCGGGGCGACGACCGCGGTGGT
TTCCGTCGCGACGACCGC	AACGACTTCCGGCGTGACGGTGACCGGCCGGCC
TTCCGCCGCGACGACCGC	GGTGAGCGTCGTGACGGGGATCGTCCGCCG
TTCCGTCGTGACGAGCGT	TCCGGCGGTGCGCCGCGTCGTGACGACGATCGTGGTGGC
TTCCGTCGTGACGACAAC	CGTGGCGGTAGCGGGAGTGGTGGCGGT
TTCCGTCGCGACGACAAC	CGTGGCAGCAGTGGCGGG
TTCCGTCGCGACGACAAC	CGTGGTGGCAGCGGCAGTGGTGGCGGG
TTCCGTCGCGACGACCGA	CGTGACGATCGTCGGGGCGACGACCGCGGTGGT
TTCCGTCGCGACGACCGC	AACGACTTCCGGCGTGACGGTGACCGGCCGGCC
TTCCGCCGCGACGACCGC	GGTGAGCGTCGTGACGGGGATCGTCCGCCG
TTCCGTCGTGACGAGCGT	TCCGGCGGTGCGCCGCGTCGTGACGACCGTGGCGACCGTCGCGAGGGGGAGCGTCCCGCC
TTCCGCCGTGACGACCGC	CGCGATGACCGCGGCGGCGACAGCCGGGGCGGCGGCTTC
CGCGGGCGTGACGACCGC	GGCCGTGACGACCGTGGGCGCGGAGGCCCGCGCCGTGACGACCGGGGTGGCCGTCCCGGTGGCTTC
CAGGGCCGTGACGACCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153291369.1\|7121512_7122046_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|182339
NZ_CP045643.1\|WP_153293193.1\|7131182_7132040_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|367841
NZ_CP045643.1\|WP_153291363.1\|7116614_7116854_+\|DUF320-domain-containing-protein	unknown	unknown	gnl\|CDD\|367652
NZ_CP045643.1\|WP_153291368.1\|7120847_7121354_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP045643.1\|WP_153291370.1\|7122085_7122871_-\|sporulation-protein	unknown	unknown	gnl\|CDD\|369195
NZ_CP045643.1\|WP_153291379.1\|7139245_7140151_+\|NAD-kinase	unknown	unknown	gnl\|CDD\|235121
NZ_CP045643.1\|WP_153291373.1\|7133484_7134513_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319832
NZ_CP045643.1\|WP_153291371.1\|7123056_7123698_+\|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl\|CDD\|234840
NZ_CP045643.1\|WP_153291365.1\|7118332_7119124_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP045643.1\|WP_153291367.1\|7119819_7120755_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP045643.1\|WP_153291366.1\|7119251_7119686_+\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP045643.1\|WP_153293194.1\|7138156_7138426_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153291375.1\|7135700_7136744_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|227119
NZ_CP045643.1\|WP_153291377.1\|7137715_7138063_-\|sterol-binding-protein	unknown	unknown	gnl\|CDD\|379708
NZ_CP045643.1\|WP_153291362.1\|7116155_7116401_+\|DUF320-domain-containing-protein	unknown	unknown	gnl\|CDD\|367652
NZ_CP045643.1\|WP_153291374.1\|7134660_7135704_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|182464
NZ_CP045643.1\|WP_153291376.1\|7136755_7137610_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP045643.1\|WP_153291372.1\|7132105_7133398_-\|DUF1015-family-protein	unknown	unknown	gnl\|CDD\|377633
NZ_CP045643.1\|WP_153291378.1\|7138433_7139249_+\|TlyA-family-rRNA-(cytidine-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|224110
NZ_CP045643.1\|WP_153291364.1\|7117422_7118211_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153291369.1\|7121512_7122046_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	8.34108e-61
NZ_CP045643.1\|WP_153293193.1\|7131182_7132040_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|367841	pfam04147, Nop14, Nop14-like family. Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production.	1.1497e-06
NZ_CP045643.1\|WP_153291363.1\|7116614_7116854_+\|DUF320-domain-containing-protein	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	2.30682e-16
NZ_CP045643.1\|WP_153291368.1\|7120847_7121354_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	1.95614e-16
NZ_CP045643.1\|WP_153291370.1\|7122085_7122871_-\|sporulation-protein	gnl\|CDD\|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	5.34478e-107
NZ_CP045643.1\|WP_153291379.1\|7139245_7140151_+\|NAD-kinase	gnl\|CDD\|235121	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	5.53452e-171
NZ_CP045643.1\|WP_153291373.1\|7133484_7134513_+\|HAD-hydrolase-like-protein	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.34168e-100
NZ_CP045643.1\|WP_153291371.1\|7123056_7123698_+\|DNA-3-methyladenine-glycosylase	gnl\|CDD\|234840	PRK00802, PRK00802, DNA-3-methyladenine glycosylase.	1.07735e-86
NZ_CP045643.1\|WP_153291365.1\|7118332_7119124_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	4.35387e-93
NZ_CP045643.1\|WP_153291367.1\|7119819_7120755_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	2.27617e-67
NZ_CP045643.1\|WP_153291366.1\|7119251_7119686_+\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	1.43471e-15
NZ_CP045643.1\|WP_153291375.1\|7135700_7136744_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	1.27804e-108
NZ_CP045643.1\|WP_153291377.1\|7137715_7138063_-\|sterol-binding-protein	gnl\|CDD\|379708	pfam14864, Alkyl_sulf_C, Alkyl sulfatase C-terminal. This domain is found at the C-terminus of alkyl sulfatases. Together with the N-terminal catalytic domain, this domain forms a hydrophobic chute and may recruit hydrophobic substrates.	8.7965e-07
NZ_CP045643.1\|WP_153291362.1\|7116155_7116401_+\|DUF320-domain-containing-protein	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	1.06911e-16
NZ_CP045643.1\|WP_153291374.1\|7134660_7135704_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	7.47898e-91
NZ_CP045643.1\|WP_153291376.1\|7136755_7137610_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.54362e-136
NZ_CP045643.1\|WP_153291372.1\|7132105_7133398_-\|DUF1015-family-protein	gnl\|CDD\|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	1.43309e-124
NZ_CP045643.1\|WP_153291378.1\|7138433_7139249_+\|TlyA-family-rRNA-(cytidine-2'-O)-methyltransferase	gnl\|CDD\|224110	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].	1.4782e-100

>NZ_CP045643.1|WP_153291371.1|7123056_7123698_+|DNA-3-methyladenine-glycosylase
MIAAPDRTPLTREFFDRPVLEVAPDLLGRVLVRATPDGPIELRLTEVEAYDGPDDPGSHAYRGRTARNGVMFGPPGHVYVYFTYGMWFCMNLVCGPAGRPSGVLLRGGEVIEGAELARKRRLSARNDKELAKGPARLATALGVDRSLDGADACAPEGGPLTLLRGTPVGSDQVRNGPRTGVAGDGGVHPWRFWAANDPTVSPYRAHTPRRRST
>NZ_CP045643.1|WP_153291370.1|7122085_7122871_-|sporulation-protein
MGFKRLLASLGAGGASVETVLTEVNVVPGGVVQGEVRIQGGSVNQAIEGLSVGLQAKVEVEGHDDQEYKQDIEFAKLRLGGAFELQAGAVHAVPFGLDIPWETPITTIDGQSLRGMHIGVTTELEIARAIDSGDLDPINVHPLPAQQAILNAFIQLGFRFKNADMERGHIRGSRQKLPFYQEIEFFPPSQYRGLNQVELSFVADDREMDVILEMDKKPGLFSEGSDSYRSFQVGLHDFQGTDWAGYLNQWLSEVGSKRSWF
>NZ_CP045643.1|WP_153291369.1|7121512_7122046_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MTELKRAPLPHDFHPPVPAFTVTSEDVASGAVLKDAQVYSAGNTSPQLSWEGFPAGTKSFAVTCFDPDAPTGSGFWHWVVFDIPASVTELVAGAGTGKFEGLPDGAVQVRNDYGTNDFGGAAPPAGDPAHRYLFTVYAVDQEKLGPDAEASPAYVGFNLRFHTLARAQLMGEYAAPA
>NZ_CP045643.1|WP_153291368.1|7120847_7121354_-|HNH-endonuclease
MRDTLVLNASFEPLSTVTLNRAVVLVLQDKAVVEQAHPELRMRGAALDIPVPRVIRLCRYVRVPFRRQAPWSRRGVLVRDRHRCAYCGRRATTVDHVVPRAQGGRDSWLNTVASCAEDNHRKAARTPEQAGMPLLRQPFEPTPADAMLLTLDRDDLDALPEWLVQPAA
>NZ_CP045643.1|WP_153291367.1|7119819_7120755_+|SPFH/Band-7/PHB-domain-protein
MAPIIIVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDSIRNRIDLREQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRDKRAAILTAEGIRQSQILTAEGEKQSAILRAEGEAKAAALRAEGEAQAIRTVFESIHAGDADQKLLAYQYLQMLPKIAEGDANKLWIVPSEIGDALKGLSGAMGNFGPMGGGSGNSGAERREKPSVTD
>NZ_CP045643.1|WP_153291366.1|7119251_7119686_+|NfeD-family-protein
MDDINAWVWWLVGAAALGIPLVVTAMPEFGMLAVGAAAAAVTAGLGGGVVIQVLVFSAVSVALIAVVRPIATRHRSQRPQLVSGVEALKGRQAVVLERVDGSGDGRIKLAGEIWSARALDTGQAYEVGQEVDVVDIEGATAIVM
>NZ_CP045643.1|WP_153291365.1|7118332_7119124_+|ATP-binding-cassette-domain-containing-protein
MSDVLELEDVSVVREGRALVDQVSWSVKEGERWVILGPNGAGKTTLLNLASSYLFPSQGTATILGETLGKVDVFELRPRIGVAGIAMAEKLPKRQTVLQTVLTAAYGMTAGWHEDYEDIDEQRARAFLDRLGMSDYLDRRFGTLSEGERKRTLIARALMTDPELLLLDEPAAGLDLGGREDLVRRLGRLARDPIAPSMIMVTHHVEEIAPGFTHVLMIRQGKVLAAGPLELELTSRNLSRCFGLPLIVEQVGERWTAHGLPMA
>NZ_CP045643.1|WP_153291364.1|7117422_7118211_-|hypothetical-protein
MLSEPRSGRLAAWGNALLAGFVSPDDAVLAIVGEDALHRVEGLPGEAGPVGLTLALGRLRALGVAGLRVALPAPGHPLGLSGPADFNARALDAEEAVVCHGAALGLVPEVYEAGPAGDVHVEVVWHCLPVREAPPADVPSLGEAERELAEALREATDVLSRLDVAGSGPVAEAAVDAYRARAERGREVLAPGYPPRAVRVLELAQRVGLLISVAYENGHGGAVSASEMAARAEALRPVERTARRAQVAAYNAFVEERERGAR
>NZ_CP045643.1|WP_153291363.1|7116614_7116854_+|DUF320-domain-containing-protein
MNIAKKAAMALTLAGIAAGASAGAAVADAGAQGAAVRSPGLASGNVVQLPVHIPVNVVGDSVNVVGLLNPAFGNTGVNG
>NZ_CP045643.1|WP_153291362.1|7116155_7116401_+|DUF320-domain-containing-protein
MKNLKKATAVAMVAGGLVAAGAGMASATDGSWAAGQAAGSPGVVSGNVIQAPVHIPVNAVGNSVNVIGLLNPAFGNLGLNH
>NZ_CP045643.1|WP_153293193.1|7131182_7132040_+|tetratricopeptide-repeat-protein
MQSLPKGLAEEVSRNLVMVARLIDEDPEGAYAYSRIALRLASRVAAVREAAGFAAYASQKYSEALAEFRAARRMTGSVDLWPVMADCERGMGRPEKALEMAGAPDVQKLDKAGQVEMRLVAAGARRDMGQLDAAIVTLQSPELASHSVQPWTARLRYAYADALLAAGREDEARDWFAKAVESDKDGSTDASDRLAELDGVEFVDAMAEDENDSEAGSVREADQGIRAEVDDVDDVDDVDEVDEIDDEDLDDAEDERDEERDEERDEDRAGDGAEERGDDKDAPRG
>NZ_CP045643.1|WP_153291372.1|7132105_7133398_-|DUF1015-family-protein
MNTAGPAEETPVRSGLDLAPFRGVRYDPDRVGSLAAVTSPPYDVIVRPDGLLHLESADPHNIVRLILPQDATPHARNRQAADTLHAWLSKGVLTTDTEPGLYVYEQRDDDMLQRGIIGTLRLSEPSDGVVLPHEDVMPHIVADRAALMRATSANLEPLLLTYRGTGSRVGTAAVIERTAEREPLLSTTTEDGLSHRLWAVTDPADLAEIQTDLGRHQALIADGHHRWATYLRLRAEHPSPSPWDFGLVLLVDTARYPLRVRAIHRLLHGLPVAEALAALTDSFRVRRLDVPLPKALEALASAAAEGNAFLLAGDGSFHLVDRPDPDLLSRTIPADHPEAWRTLDATVLHATLLAHVWGIPEDSPAHIAYIHDTEATVAKAELDGGTAVLLHPVHEEVVRDLARQGVTMPRKSTSFGPKPASGLVLRALSD
>NZ_CP045643.1|WP_153291373.1|7133484_7134513_+|HAD-hydrolase-like-protein
MSQTVRTRPEGSERALSEAYDTALLDLDGVVYAGGNAIDHAVESLGTARSGGMHLAYVTNNALRTPDAVAEHLGELGVPTDAGDVITSAQAAARLISEQVPAGARVLVIGGEGLRVALRERGLEPVESADDDPAAVVQGYGGPDLRWARFAEACYAIARGVPWFASNTDLTIPSARGIAPGNGAAVEVVRIATGAEPQVAGKPLPPMHRETILRTGAKRPLVVGDRLDTDIEGAFNGEVDSLLVLTGVTDGAQLLAAPPRHRPTYVDADLRGLLTGQPAIGQEGDGFRCGGWTATAGSERLELSGDGEALDGLRALCAAAWTAAGDGTCALDGAKALARLGL
>NZ_CP045643.1|WP_153291374.1|7134660_7135704_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MLVDSPPEQRAETAPAPPNRWAIRAVGLVVSAAVLVLVALASIAIGAKAVPLDQVWHGLFHDTGTYADVVVGDRLSRTVLGLLVGAALGLSGAVLQALTRNPLADPGLLGINAGASAAVVTAITYFGVTSVSGYVWFAFFGAAAVGALVWFLGGSRGATPVRLALAGTAISAALYGYLQAVMIMDDAALGKMRFWTVGSLASATDSTIRQVLPFLVAGTVLALGLARPLNAMAMGDDTARALGANLNRTRALSMAAATVLCGAATAACGPIVFVGLMVPHAVRSFTGPDLRWILPYATLLSPVLLLGADVTGRIIARPAELQVGIVTAVLGGPVFIYLVRRRRTAQL
>NZ_CP045643.1|WP_153291375.1|7135700_7136744_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MSTTRTRSLRARGGLSVRFDVRALVVVVLLMVAALAASVVLIGTGDFPIPAVDVLRTLAGDGNAGQEFIVNDLRLPRVLVGLLVGASLGLGGAIFQSVSRNPLGSPDVLGLGQGATAGALIMIVLFSGTANQVALGALVGGLVTGVAIYLLAWKRGVHGYRLVLVGIGVSAIVTAVNGYLLTKADLVDAARAVVWMTGSLNGRDWAQVWPLLAMCAVLVPLVLANARGLRMMEMGDDVSYALGVRVERVRLLMMLSAVLLTAGATAAAGPVGFVALTAPQLARRLTRSPGPNLVPSMCMGAALLIVADWASQRAFGADQLPVGVVTGVLGGIYLLWLLVTERKAGRI
>NZ_CP045643.1|WP_153291376.1|7136755_7137610_+|ATP-binding-cassette-domain-containing-protein
MSAPANENPQRSTVNRLSADNVTLGYDQRVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLKPSEGRVLLDGQVIQSMPAKKVARTLGLLPQSSIAPDGITVGDLVGRGRYPHQGLLRQWSTEDERVVRESMASTGVAELADRYVDELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLDLCAELHEERGRTLVAVLHDLNHAARYATHLIALRDGRVVAEGAPRDIVTAELVEEVFGLRCQVIDDPETGTPLVVPAARKARVAVSAAEGS
>NZ_CP045643.1|WP_153291377.1|7137715_7138063_-|sterol-binding-protein
MATTEECRAALDKLSDNLAGAEGDVRGAAALDRSLSCRITDLDITFVGRLEDGRIEVLDTISGPPREKAQIRLTMSGDDLIAMVNGNLHFAKAWGSGRVKLEAGLLDLFRLRSLL
>NZ_CP045643.1|WP_153293194.1|7138156_7138426_+|hypothetical-protein
MPAEDTPDVRDPAEPAYDPAAPAPLDVERVPTGSAEVDAQLDRLGDADHLATDGHLEVYEDVHRGLRDALTALDARPGPPAPPSYDRRS
>NZ_CP045643.1|WP_153291378.1|7138433_7139249_+|TlyA-family-rRNA-(cytidine-2'-O)-methyltransferase
MAGVARRRLDAELVRRKLARSREHAGQLIAAGRVTVGKTLATKSATQVETAAAIVVTQDDNDPDYVSRGGHKLAGALAAFVPRGLRVEGRRALDAGASTGGFTDVLLRAGAAHVVAVDVGYGQLAWSLQSDERVTVKDRTNVRELTLEAIDGEPVDLVVGDLSFIPLGLVLPALVRCAAPDADLVMMVKPQFEVGKERLGSGGVVRSPELRAEAVRGVAGRAAELGLGVEGVTASPLPGPSGNVEYFLWLRAGSPELDPADVDRAVAEGPR
>NZ_CP045643.1|WP_153291379.1|7139245_7140151_+|NAD-kinase
MTQTRARTVFLLAHTGRPAAIRSAELVVQGLLRSGLGVRVLEAEAADLPLPPEVELVREATPQCLDGCELLIVLGGDGTLLRGAEFARASGVPMLGVNLGSVGFLAEAERDDLDKVVDRVVTKAYEVEERMTVDVVVHRNGDIVHTDWALNEAAVQKVSAEKLLEVILEIDGRPVTGFGCDGIVCATPTGSTAYAFSAGGPVVWPEVEALLMVPISAHALFAKPLVTSPDSVLAVEVLPHIPPGVLWCDGRRTVELPPGARVEVRRGAVPVRLARLHHASFTDRLVAKFALPVAGWRGAPH

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Crispr_ID: NZ_CP045643_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_14

8265929-8266006

Orphan

Consensus_repeat	Method
TCCCGTGCTGGCTTGGTGCTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045643_14

>merge|NZ_CP045643|14|8265929-8266006|CRISPRCasFinder
TCCCGTGCTGGCTTGGTGCTGACCAAAAGCCCATGTCATCACCCGTCTTCACCCGTCCCGTGCTGACTTGGTGCTGAC

>NZ_CP045643|14|11|8265929-8266006|CRISPRCasFinder
TCCCGTGCTGGCTTGGTGCTGAC	CAAAAGCCCATGTCATCACCCGTCTTCACCCG
TCCCGTGCTGACTTGGTGCTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153292214.1\|8272314_8273943_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|188352
NZ_CP045643.1\|WP_153292213.1\|8268327_8268657_+\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP045643.1\|WP_153293277.1\|8271076_8272321_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224089
NZ_CP045643.1\|WP_153292202.1\|8254995_8256171_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|213815
NZ_CP045643.1\|WP_153292205.1\|8259125_8260733_+\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|223885
NZ_CP045643.1\|WP_153292215.1\|8273939_8275106_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173849
NZ_CP045643.1\|WP_153292216.1\|8275105_8276578_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|223395
NZ_CP045643.1\|WP_153292217.1\|8276567_8276834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292208.1\|8262348_8264274_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|376570
NZ_CP045643.1\|WP_153293275.1\|8268756_8269812_+\|4-hydroxyphenylpyruvate-dioxygenase	unknown	unknown	gnl\|CDD\|273528
NZ_CP045643.1\|WP_153292203.1\|8257120_8257666_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153293276.1\|8269823_8270978_+\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|376451
NZ_CP045643.1\|WP_153292211.1\|8266329_8267148_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153293274.1\|8256244_8257015_+\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP045643.1\|WP_153292207.1\|8261312_8262113_+\|3-hydroxybutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|211705
NZ_CP045643.1\|WP_153292201.1\|8253640_8254987_+\|Tellurium-resistance	unknown	unknown	gnl\|CDD\|376767
NZ_CP045643.1\|WP_153292206.1\|8260778_8261252_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240032
NZ_CP045643.1\|WP_153292204.1\|8257751_8258825_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225844
NZ_CP045643.1\|WP_153292209.1\|8264317_8265706_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP045643.1\|WP_153292212.1\|8267531_8267870_+\|transposase	unknown	unknown	gnl\|CDD\|379129

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153292214.1\|8272314_8273943_+\|hypothetical-protein	gnl\|CDD\|188352	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain. SagB of Sterptococcus pyogenes participates in the maturation of streptolysin S from a ribosomally produced precursor polypeptide. Chemically similar systems operate on highly diverse sets of bacteriocin precursors in numerous other bacteria. This model describes a domain within SgaB and homologous regions from other proteins, many of which appear to be involved in biosynthesis of secondary metabolites. While some substrates may be intermediates in non-ribosomal peptide syntheses, others are involved in heterocycle-containing bacteriocin biosynthesis, and can be found near SgaC-like (see TIGR03603, cyclodehydratase) and SgaD-like (see TIGR03604, "docking") proteins. Members of this domain family are heterogeneous in length, as many have a partial second copy of the domain represented here. The incomplete second domain scores below the cutoffs to this model in most cases.	8.38098e-19
NZ_CP045643.1\|WP_153292213.1\|8268327_8268657_+\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	2.72189e-26
NZ_CP045643.1\|WP_153293277.1\|8271076_8272321_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.66045e-67
NZ_CP045643.1\|WP_153292202.1\|8254995_8256171_-\|glycosyltransferase	gnl\|CDD\|213815	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.	3.77558e-161
NZ_CP045643.1\|WP_153292205.1\|8259125_8260733_+\|apolipoprotein-N-acyltransferase	gnl\|CDD\|223885	COG0815, Lnt, Apolipoprotein N-acyltransferase [Cell envelope biogenesis, outer membrane].	2.11829e-90
NZ_CP045643.1\|WP_153292215.1\|8273939_8275106_+\|hypothetical-protein	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	4.01643e-50
NZ_CP045643.1\|WP_153292216.1\|8275105_8276578_+\|AMP-binding-protein	gnl\|CDD\|223395	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	5.47569e-67
NZ_CP045643.1\|WP_153292208.1\|8262348_8264274_+\|GAF-domain-containing-protein	gnl\|CDD\|376570	pfam01590, GAF, GAF domain. This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyze ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regulating catalytic activity by binding to the regulatory GAF domain(s). The opposite hydrolysis reaction is catalyzed by phosphodiesterase. cGMP-dependent 3',5'-cyclic phosphodiesterase catalyzes the conversion of guanosine 3',5'-cyclic phosphate to guanosine 5'-phosphate. Here too, cGMP regulates catalytic activity by GAF-domain binding. Phytochromes are regulatory photoreceptors in plants and bacteria which exist in two thermally-stable states that are reversibly inter-convertible by light: the Pr state absorbs maximally in the red region of the spectrum, while the Pfr state absorbs maximally in the far-red region. This domain is also found in FhlA (formate hydrogen lyase transcriptional activator) and NifA, a transcriptional activator which is required for activation of most Nif operons which are directly involved in nitrogen fixation. NifA interacts with sigma-54.	3.60891e-15
NZ_CP045643.1\|WP_153293275.1\|8268756_8269812_+\|4-hydroxyphenylpyruvate-dioxygenase	gnl\|CDD\|273528	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase. This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see . In some bacterial species, this enzyme has been studied as a hemolysin. [Energy metabolism, Amino acids and amines].	7.83736e-97
NZ_CP045643.1\|WP_153293276.1\|8269823_8270978_+\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	2.23245e-148
NZ_CP045643.1\|WP_153293274.1\|8256244_8257015_+\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	9.06591e-48
NZ_CP045643.1\|WP_153292207.1\|8261312_8262113_+\|3-hydroxybutyrate-dehydrogenase	gnl\|CDD\|211705	TIGR01963, D-beta-hydroxybutyrate_dehydrogenase, 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.	1.97811e-125
NZ_CP045643.1\|WP_153292201.1\|8253640_8254987_+\|Tellurium-resistance	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	4.22424e-66
NZ_CP045643.1\|WP_153292206.1\|8260778_8261252_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.94322e-53
NZ_CP045643.1\|WP_153292204.1\|8257751_8258825_-\|hypothetical-protein	gnl\|CDD\|225844	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane].	1.4314e-08
NZ_CP045643.1\|WP_153292209.1\|8264317_8265706_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0
NZ_CP045643.1\|WP_153292212.1\|8267531_8267870_+\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.36064e-18

>NZ_CP045643.1|WP_153292209.1|8264317_8265706_-|MFS-transporter
MASETTAPPPPATNLKRIVAASLIGTTIEWYDFFLYGSAAALVFNKLFFPGSDPLVGTLLSFLTYAVGFAARPIGALVFGHYGDRLGRKKLLVLSLLLMGGATFAIGLLPTHATVGAAAPVLLTALRLVQGFALGGEWGGAVLLVSEHGDAKRRGFWASWPQTGAPAGQLLATGVLSLLTATLSDDSFVAWGWRVPFLLSGVLVVVGLWIRLSVDESPVFQEALARSEARGRTRESAAERLPLVSVLRHHWRDVLVAMGARMAENISYYVITAFILVYATTSAGVSRQTALNAVLIASAVHFAVIPAWGALSDRIGRRPVYLLGAAGVGLWMFPFFSLIDTGGFGNLILAVTVGLVLHGAMYAPQAAFFSEMFATRMRYSGASIGAQFASVAAGAPAPLIATALLSDYGSSTPISLYVIAAAVLTLIAVGVAEETRHRDLAGVADHDEAEATVPAADARSTA
>NZ_CP045643.1|WP_153292208.1|8262348_8264274_+|GAF-domain-containing-protein
MSRDHEQSAERSADNAETPFLQLLARGAPAEAYEQPVLLARAESCPAARVAALEEAKQLALRVRSEMEGRRRREAELSALFETAHDLAGLRDVDAVLRAIVQRARSLLGTDVAYLSLHDEAEGDTYMRVTEGSVAARFQQLRLGMGEGLGGLVAQTARPYVTDDYFKDDRFQHTRAIDAGVQDEGLVAILGVPLMIGPHVIGVLFAADRRARIFEREQIALLGSFAALAAAAIDTANRLTETRSALDRLGRAHEIIRDRSGVIERASDIHDRLAELVLRGGGVHDVAAAVSEVLDGTVEFTGTDTAPGAALQASRTEGHAVRHGQDWVAAVAAGGELLGALVLGGHPGLDPVDQRTFERAAMVTSLLLLARRSAAEAEQRVRGELLDDLLDVRDRDPRLLRERATRLHADLDAVHVVLAARLDTTAADADREADARRRLWSAASHLAATGHGLAAARDGGTVLLLPLGPDETATDLARRTAGQLGTAVQEAVTVGASAPLEDLAAHPEAVAAAYAEGQRCLEALRLLGRAGDGAAAEDFGFLGLLLAGDRDISGFVGRTIGRVVDYDQQRGTDLLRTLDAYFACGMSPARTKDDLHVHVNTVAQRLERVGRLLGEDWQSPARVLEIQLALRLHRLSTTARH
>NZ_CP045643.1|WP_153292207.1|8261312_8262113_+|3-hydroxybutyrate-dehydrogenase
MTSPSALPGPHAPSSGLDGRTALVTGAAGGIGRACVLRLAGEGARVRAVDLDAAGLDELAELARGLPGTVEPHPLDLTDLDAAERAAEGTDVLVNNAGLQTVRPIEEFPPEDFRTMLTVMLEAPFRLIRGALPHMYGQGWGRIVNVSSVHGLRASAFKSAYVAAKHGLEGLSKTAALEGAPHGVTSNCVNPAYVRTPLVERQLADQARAHDVPEERVLSEVLLRDSAVKRLVEPDEVADAVAYLCGPRSSFVTGTSLVMDGGWTAH
>NZ_CP045643.1|WP_153292206.1|8260778_8261252_+|NUDIX-domain-containing-protein
MATPDFIRTIRASAGHQLLWLPGVTAIVFDDEGRVLLGRRTDTGKWSVVGGIPDPGEQPAACAVREVFEETAVHCVVERVVLVQALDPVTYENDDTCQFMDVTFRCRAVGGEARVNDDESLEVGWFSVDALPELNEFAMFRIKQALSTAPAWFDTTT
>NZ_CP045643.1|WP_153292205.1|8259125_8260733_+|apolipoprotein-N-acyltransferase
MTATATPVDEPEQLEPHAAPASRGARLARRYAPAAAAALSGVLLYVSFPPRTVSWLALPAFAVFAWVLRGRSWKAGLGLGYLFGLGFLLPLLVWTGVEVGPGPWLALVAVEAVYIALVGAGITLVSRLPLWPLWAAAVWIAGEAARARAPFGGFPWGKIAFGQADGVFLPLAALGGTPVLGFGVVLCGFGLYEVVRQVVDGRRTGVVRRGAAAVALLSVAVPLAGAFAARSLVSDKAEDGTATVAVVQGNVPRAGLEFNAQRRAVLDYHARETERLAAEVKAGKVARPDFVLWPENSSDVDPFTNSDARAVIDTAAKAIGVPISVGGVVERDGKLYNEQILWDPVKGPLDTYDKRQVQPFGEYLPLRSLLGAINKNWTTMVRQDFSRGHKPGVFTMDGTGVGLVTCYEAAFDWAVRSTVTDGAQIISVPSNNATFDRSEMTYQQLAMSRVRAVEHSRTVTVPVTSGVSAVIMPDGKITRRTGMFVADSLVQKVPLRSSETPATRLGILPEMLLVLVAAGGLGWAGARAVRGRRAV
>NZ_CP045643.1|WP_153292204.1|8257751_8258825_-|hypothetical-protein
MTSAAGTTAVNERRNVSDAAGVVVLGSCAVWSLITAAVHDGRPEGVLLAVLAMAAGYASGRILGAVAPVAAPCAGALAGLGLALTARYTTPGPQVTVVLGHTGATAALLTLSVAAACCAAWAARPPALRLALRLLAVGITVTAAVLGSAAGCALGAAVLLCSLAADRVRRRALGLGGLTLAAALVTSTAWAIAEDALPDGLTASLEGQLTEHRVLLWRDALHLAGRNPALGVGPGRYGELSPTIAQAPLPDGKPHSAALQQVAEQGVVGALLLAALFCWVLYSLWRSPRSTPIALTAGAALTALAVIASVGNALSFTTVTAGAGLLAGLATARPLADGCPDNAVKEDERLWAHRLEP
>NZ_CP045643.1|WP_153292203.1|8257120_8257666_+|hypothetical-protein
MRDHPHGQYIPHSDVWTGRATNRVQWLPALAGAACIALGIELAVDSTWNSGVAALAMSVVGCIAAGLLVLFGTLAFVHVAVKVDKDSLEVRCGHVGLPRRRIPLADVVGADFAPSVTPWQWGGWGYRWRPEKGTAVIVRRGEGMVLRLGDGHTFTITVDNAEAAVRVIRDRLRPATPGTVI
>NZ_CP045643.1|WP_153293274.1|8256244_8257015_+|glutamate-racemase
MDSGIGLLAAATAVRRLRPDADLVLSSAPDTMPWGPRTPQYVNEQALAVAEAAAEHRPDALIVACNTASVHALPALRARLEPDVPVIGTVPAIKPAAAGGGPVAIWATPATTGSPYQRGLIREFAEGVAVTEVPCPGLADAVEHGDQAGIDAAIAAAAALTPGDVRAVVLGCTHYELVAQRIRAAVQRPGLPPLVLHVSAGAVAAQALRRIGAVPDPGAVAEGTVTVLLGGRVGTLPEPALGYDEGRLLQAVGSAR
>NZ_CP045643.1|WP_153292202.1|8254995_8256171_-|glycosyltransferase
MSAVAWTAVGSLAAWLWLLLGQGFFWRTDLRLPPCREPDAWPPVCVVVPARDEAGVLPASLPTLLAQDYPGRAEVFLVDDGSSDGTGELARELARAHGGLPLTVESPGEPPAGWTGKLWAVRHGIALARTREPVYLLLTDADIAHAPDSLRTLVAAARTGGFDLVSQMARLRVESVWERLVVPAFVYFFAQLYPFRRIAVRGSRTAAAAGGCVLLRADTAERARIPDAVRHAVIDDVALARAVKGVGGHIWLGLAERVDSVRPYPRLRDLWHMVSRSAYTQLRHNPLLLLGTVLGLVLVYLVPPLALVTGLVAGNTGASAAGGLAWLLMTATYLPMLRYYRQPWWLAPLLPVTAFLYLLMTVDSAVRHYRGRGAAWKGRTYARPDTALDER
>NZ_CP045643.1|WP_153292201.1|8253640_8254987_+|Tellurium-resistance
MSKGSNVPVPTSALRVEMGWSSGPGVPDADASALLLVSGKVRSDGDFVFYNQPEHSSGAVRHEGKRDAGGRVTDTLLVDLARVEPAVETVVLAASADGGTFGQVPGLYVRVLDAGRGAEVARFDSGDATVETAFVLGEFYRRQGAWKFRAVGQGYGSGLEGLATDYGIAVDEPQHATPSAAPPAPAPSPRPATPPPAASPPPAPGTRVAGPPPPVPTPAAVTPPPPPIPPAPPQAPVRLSKVTLTKEAPSVSLAKQGGTSGSMRVNLNWQVRKQFSGWGSKRGRAVAMHADLDLDLCALYELSDGSKGVVQALGNAFGALHQPPYIHLDGDDRTGAVASGENLTVNLDHRRSFRRILIFVTIYEGARSFADLHATVTLQPTNGAAVDFSLDECTVPSTVCALALITNSGGDLIVQREARYLVPERGVSPQRTVDRVYGWGMNWTPGRK
>NZ_CP045643.1|WP_153292211.1|8266329_8267148_+|hypothetical-protein
MDVYVEATLDPLGAADRGAVLVDWFERAFSGPFAELVHQEERAEFGVQTGTSVRQSGGSRRSNMSHLGRNRARLRVELEQSPDWVVTEFYGDDTLGRVQCSYFPEEGGWSKLVVGLQAGSLRLADPKYCADLVDFLAQAVDDLNPVFARIERDSFSDWSNIEAALTRNLDDSLPEGREFLRGYAWVTVCPQELAIRLGGPETLAASGAFHRVVPLRKGGVLLQASETLAGYTDHVVERVFAALAPVLPEGQPHPDPAHPDLRFVLRDAADAR
>NZ_CP045643.1|WP_153292212.1|8267531_8267870_+|transposase
MSTRPWVVGDGLWALIELLLPPRPEKSPGPQPVADRLCLRGILYVLHNDMAWQLLPLELEFGSGQTCWRRLDRRQQAGVVDRLHRMPAARPSERPDPQRHPNPAVEPGVHPT
>NZ_CP045643.1|WP_153292213.1|8268327_8268657_+|MbtH-family-NRPS-accessory-protein
MRAGHSHRPPSGNSLPAPWFRIRVPASAISGHAEKWSTLVTNPFDDPDGVFFVLINDELQYSLWPAFADVPPGWAVAREAGTHRDSVAFIEENWTDMRPKSLVDRMAGH
>NZ_CP045643.1|WP_153293275.1|8268756_8269812_+|4-hydroxyphenylpyruvate-dioxygenase
MYVGDAPSVAADFVDGYGFEVFATAEGHGPEGAARSLALRHGGIVLVVTEALDSAHPAAGFVERHGDGIADIALTGADVRAAFRHAVERSAVVLTEPAERDGYVTAVLASGFDDVRHTLVQRPEDERERPGPLPGFVPAPEAGPAPAESPELTLLDHIAVSVRTGELADSTTYYERVFGFHTVYEELMVQGTEAMDSKAVRNAAGDVTFTVLAPSADHDAGHIGDFLERHGSGGIHHLAFATEDIATSIARLTKRGVNFLETPDVYYERLADRLTLARYSAAELREAGILADEDHDGQLFQIFTRTTHPRRTLFFEIIERLGADTFGSGNVRALYEAVQAERSDGSQERVQ
>NZ_CP045643.1|WP_153293276.1|8269823_8270978_+|alpha-hydroxy-acid-oxidizing-protein
MSPATTNACLLTPADAEEHARLALPPTVERFVNGAAGTGLTLRANREALDRVCLVPRVLTDVSSPVTAGRLLGVDAKMPVAVAPMAYQRAVHEDGELATAGAARDLGVPFTVSMFSSHSVEEIAAVGATMWFQVYWLRDRGRTVELLRRAEAAGCVAVMLTVDTPRMGRRLDDLRAGFSLPDGVKAAHFRDLSGPGPGDPTPGVSEVAAQTAALVDPSLSWSDIEWLREQTRLPLILKGVLDPLDARRAVRHGVDAVVVSNHGGRQLDGAVASVDALPAVAEAADGCCEVLLDSGVRSGTDIIKAVALGATGVLLGRPVLWGLAAGGGEGAKHVLRLVQEELEHALALAGCPDLGAASRLRTVTADGRTGAVLERARGDMVGAR
>NZ_CP045643.1|WP_153293277.1|8271076_8272321_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MNFLNEIAGRYPGALSLAAGAPYEGFYDVEDVHRCLRRFCEHLRADRGYSEEQVRRTLLQYGRTKGIVHDLIARHLSVDEGMDADPESIVVTVGFQEGLFLTLRTLRRDARDVLLAVTPAYVGATGAARLLDMPVHPVAGGPGGVDTDDLVRHIRAARGAGLRPRACYLVPDFANPSGVRIPLDLRHELLDIARREDILLLEDNPYGLFPLKGERLPTLKALDTARSVVYLGSLSKTVFPGTRVGYVMADQLVADGAGGSVRLADHLARVKSMITVNTSPLAQAVVGGRLLEHGCSLERANAREAVFYRRGLERLSDGLARRFPAPCPVTWNAPDGGFFVVVSVPFEVTDALLERSAREHRVLWTPLHPFYDSPGPMRQLRLSCSALPPDGIDEALDRFAVFVRARAAEDGIRW
>NZ_CP045643.1|WP_153292214.1|8272314_8273943_+|hypothetical-protein
MVRHGPRRAADRAPDMRKAGVRDGMDVEELVDPLLAQFLEETRLRSETQVPPRATEPGPRPEMHQRWLALAEVLSVGYGERAGAVITKGRTLMRARTTPSAGALYPFDVLVAFQSTAGYRIYHYDAADCCLHSPFPVGDQDLAALLGMPQAWERMPAAVVAVVGRPWKSMRKYGRRGYRYTHLDGGHAAANIALAAADAGFTPAVHLRFDRHRAARLFAVDGRCREPQALVALSAPAGGQTWQGADGAGHANPFAVPVWRHEGDAGSERPDAAECDNWLDISSISTYGGESSPPPHWGTVRSVTCADEATDTADDILLPGADTAPTPPFPQVAVERTSAKGFLPGALDRASLGRALAGLRGSLAVDSADGPLVGLRVLARTVEGIAPGSYAYVPQTHALSPRGGDGASSESVAAACVNQDVVRDAAVLIALHAPMRALRGRHGRQGLAELHFHAAAAAQRICLGGCAHDVGVTCLGGFDAERIAELTMLNSSEEVIYVLAAGVPDASAVKWDRAPIAYSHGARRTSGAPEQIRGEESVVVPR
>NZ_CP045643.1|WP_153292215.1|8273939_8275106_+|hypothetical-protein
MSNSILSARMTDAHRELGERARAYFTPRWLEQWRAAPGGPLRKDVWPELAERGFLGVSLPREHGGQGLGLLGALVVGEALAQVGDSGVALGMHVHNEVAGEWLTSAADPTLRERYLPKLLSGELLACQCDTDPSAQEPTTAVRDGDRLILRGQKKFVVNGAQADLCFVSARLDGQPAVVVVEKDAPGVRVTHAYDKLGTRSIDSALLEFDDVEVPADRVVARSGVSQLMRWNRVMSRMRFLIAVDAWLIHRMLLTHIVDYSTNRELGGRALSAWPINAHALARARADQELMEAGITDGYLRLTEGGSTVPEIAELKWFCVERATELASLSTDLEGGAGYMWDSVALRAHAQLRGLRMSGGSQTTMLTIANHSMACRAELGDQDRAGVA
>NZ_CP045643.1|WP_153292216.1|8275105_8276578_+|AMP-binding-protein
MTAEHSLDEVFLRACEEHGNRRALVGDGEELTYDQFAGRVRERAAALSELLADDDRRVAIHAANSVDYLVSYYALVIDRRLPLLVDAQFGALELQGIDDSCGVDVYLTDRPDTFPLPATTRTVPGSRLALATPVRPHPRPPAPEPHPATATCRFTSGTTGAPKCLEFSHAAIHSAARAWADGTGLRAGDRVLCLAAFTNGLAFNTSLLPVFLTGAELHLYRGLPTSGGITRALRRSRATRLVAFPLAYRLLTQAAEPDHAAFATVTRAISAAAALDPAIRSAFHTRYGIQIADYYGIAETGPCTFERDSHRTTGLGTPLPGVTLRIDADPAGRSQVHVRTASMATRCLNVPGALEARTGPDGFYATGDTGSLDAGRLHITGRIGGPINLAGRKIDPTEIERVALALDGVLDCVCFADTDTRGETVLHLVLSGPRTPRRAEVVKVCQVGLAPYKVPGWVSVLEAIPRSSAGKVRLSELKELLRTGAPAHDR
>NZ_CP045643.1|WP_153292217.1|8276567_8276834_+|hypothetical-protein
MTADTDRTDLHREIERLVEVATGRVVTAADLRAADGALDRAGVNSIGYINLMEGLELRFGAVVDPEADPQYLMSVDSIVSFVRAQKRP

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Crispr_ID: NZ_CP045643_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_15

8716586-8716791

Orphan

Consensus_repeat	Method
CTGCTCCCCGCGNGTGCGGGGATGGNN	CRT

3 spacers

The CRISPR arrays of NZ_CP045643_15

>merge|NZ_CP045643|15|8716586-8716791|CRT
CTGCTCCCCGCGCGCGGGGATGGTCCCCTCTTCGATCCGGCGAACCTGGGCGGGAAGGTCTGCTCCCCGCGCGTGCGGGGATGGTCCCAGGGACGAGGTCTTCGGGTCTGCTCACCAGTTCTGCTCCCCGCGTGTGCAGGGATGGCCCCCGCTCCTGACTCCGCTTGTCGGGGTCTTACGCCTGCTCCCCGCGCGTGCGGGGATGG

>NZ_CP045643|15|3|8716586-8716791|CRT
CTGCTCCCCGCGCGCGGGGATGGTC	CCCTCTTCGATCCGGCGAACCTGGGCGGGAAGGT
CTGCTCCCCGCGCGTGCGGGGATGG	TCCCAGGGACGAGGTCTTCGGGTCTGCTCACCAGTT
CTGCTCCCCGCGTGTGCAGGGATGG	CCCCCGCTCCTGACTCCGCTTGTCGGGGTCTTACGC
CTGCTCCCCGCGCGTGCGGGGATGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153292538.1\|8725687_8726128_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292532.1\|8715480_8716457_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP045643.1\|WP_153293318.1\|8706486_8706708_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP045643.1\|WP_153292527.1\|8709662_8710184_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP045643.1\|WP_153292525.1\|8705688_8706345_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP045643.1\|WP_153292536.1\|8721246_8721831_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379154
NZ_CP045643.1\|WP_153292533.1\|8717938_8718913_+\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|185714
NZ_CP045643.1\|WP_153292542.1\|8730808_8731785_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP045643.1\|WP_153292530.1\|8712706_8713051_+\|DUF2750-domain-containing-protein	unknown	unknown	gnl\|CDD\|378546
NZ_CP045643.1\|WP_153292534.1\|8718985_8719876_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225943
NZ_CP045643.1\|WP_153292539.1\|8727452_8728429_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP045643.1\|WP_153292535.1\|8720132_8720786_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|377115
NZ_CP045643.1\|WP_153292529.1\|8711751_8712270_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292528.1\|8710435_8711050_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153293319.1\|8714030_8715311_+\|IS701-family-transposase	unknown	unknown	gnl\|CDD\|379252
NZ_CP045643.1\|WP_153292540.1\|8728588_8729710_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|379267
NZ_CP045643.1\|WP_153292531.1\|8713047_8713880_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP045643.1\|WP_153292526.1\|8707083_8707443_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292537.1\|8723351_8723681_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292541.1\|8729735_8730293_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153292542.1\|8730808_8731785_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	9.31447e-21
NZ_CP045643.1\|WP_153292532.1\|8715480_8716457_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	9.65941e-21
NZ_CP045643.1\|WP_153293318.1\|8706486_8706708_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.91868e-20
NZ_CP045643.1\|WP_153292527.1\|8709662_8710184_-\|hypothetical-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.00026056
NZ_CP045643.1\|WP_153292525.1\|8705688_8706345_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.87939e-18
NZ_CP045643.1\|WP_153292536.1\|8721246_8721831_+\|hypothetical-protein	gnl\|CDD\|379154	pfam13384, HTH_23, Homeodomain-like domain.	0.00583978
NZ_CP045643.1\|WP_153292533.1\|8717938_8718913_+\|ATP-dependent-DNA-ligase	gnl\|CDD\|185714	cd07905, Adenylation_DNA_ligase_LigC, Adenylation domain of Mycobacterium tuberculosis LigC-like ATP-dependent DNA ligases. Bacterial DNA ligases are divided into two broad classes: NAD-dependent and ATP-dependent. All bacterial species have a NAD-dependent DNA ligase (LigA). Some bacterial genomes contain multiple genes for DNA ligases that are predicted to use ATP as their cofactor, including Mycobacterium tuberculosis LigB, LigC, and LigD. This group is composed of ATP-dependent DNA ligases similar to Mycobacterium tuberculosis LigC. ATP-dependent polynucleotide ligases catalyze phosphodiester bond formation using nicked nucleic acid substrates with the high energy nucleotide of ATP as a cofactor in a three step reaction mechanism. DNA ligases play a vital role in the diverse processes of DNA replication, recombination and repair. Members of this group contain adenylation and C-terminal oligonucleotide/oligosaccharide binding (OB)-fold domains, comprising a catalytic core unit that is common to all members of the ATP-dependent DNA ligase family. The adenylation domain binds ATP and contains many of the active-site residues. The common catalytic core unit comprises six conserved sequence motifs (I, III, IIIa, IV, V and VI) that define this family of related nucleotidyltransferases.	6.53458e-66
NZ_CP045643.1\|WP_153292530.1\|8712706_8713051_+\|DUF2750-domain-containing-protein	gnl\|CDD\|378546	pfam11042, DUF2750, Protein of unknown function (DUF2750). This family is conserved in Proteobacteria. The function is not known.	1.7729e-16
NZ_CP045643.1\|WP_153292539.1\|8727452_8728429_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.12828e-20
NZ_CP045643.1\|WP_153292535.1\|8720132_8720786_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|377115	pfam03734, YkuD, L,D-transpeptidase catalytic domain. This family of proteins are found in a range of bacteria. It has been shown that this domain can act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. This gives bacteria resistance to beta-lactam antibiotics that inhibit PBPs which usually carry out the cross-linking reaction. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue. Several members of this family contain peptidoglycan binding domains. The molecular structure of YkuD protein shows this domain has a novel tertiary fold consisting of a beta-sandwich with two mixed sheets, one containing five strands and the other, six strands. The two beta-sheets form a cradle capped by an alpha-helix. This family was formerly called the ErfK/YbiS/YcfS/YnhG family, but is now named after the first protein of known structure.	0.00120569
NZ_CP045643.1\|WP_153293319.1\|8714030_8715311_+\|IS701-family-transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.99885e-88
NZ_CP045643.1\|WP_153292540.1\|8728588_8729710_+\|IS630-family-transposase	gnl\|CDD\|379267	pfam13565, HTH_32, Homeodomain-like domain.	6.53442e-10
NZ_CP045643.1\|WP_153292531.1\|8713047_8713880_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.65622e-21
NZ_CP045643.1\|WP_153292534.1\|8718985_8719876_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	3.53098e-14

>NZ_CP045643.1|WP_153292532.1|8715480_8716457_+|IS5-family-transposase
MTRRQLTNAQWKFIEPYLPIGRYGPYPERLREQFEGVIWRFRSSGQWREMPAEFGPWATVYGRFRVWRDAAVFTDLLEGLIAEGARMGRTDLSLVSVDSTTVRAHHDAAGLRVSKHLMEALEEAAQEQEAARPKRGGPEEQNGHTERRRVRRRHKLRLREALLGRSRGGLTSKIHLAADRRCRPLALVLTVGQAGDSPQFVPVLAKVRIRLPAGPPRTKPGAVAADKAYSSHDNRAYLRKRGIKAVIPEKRDQAANRKKKGTRGGRPVSHDADLYKERNTVERLINKLKAWRGIATRYDKTPDSYLAGLHLRAAMIWIDDLIKTT
>NZ_CP045643.1|WP_153293319.1|8714030_8715311_+|IS701-family-transposase
MDLHEVRRVRATLALFVADVFASVPRKDQRAKGDCYLRGLMLDGRRKSIQAMAARLPDGNEQNLQQFVNQSTWDPVPVQRRINERLLPLVDPVAWVIDDVSMPKDGRMSVGVAPQYCGALGKRANCQVAVSVHAASDTASCPLQWRLFLPEDWAADGHRRTRTQVPPEVIHREKWRLALDMLDALADWGMTPPAVVSDAAYGTNAHLRAALSERGLTYVLSVRSDVSAHPFDAQPMAPDRKGDIGCWPQPRYRQKAPSVAALATALGREAFTPLTWRQGSKGELRSRFAAVRVRPAGKAVERPIKAAASAGQGWWDGVLPDCWLLAEWPAGADAPSEYWLSNLPPDTPIADLVRLAKVRWRIEHDYRELKHGLGLDHFEGRSWPGWHHHVTLVTAAQAFLTEQRLAPKAPHPASPSTRSSTLSKTP
>NZ_CP045643.1|WP_153292531.1|8713047_8713880_-|IS5-family-transposase
MTRCGRWSSRCSPGWTVVEPLFPRVDRRARHPGRKRHPDRLVFQGILFVLHTGIAWEHLPQELGFGSGMTCWRRLAEWTEAGVWSRLHEVLLAKLRAANALDFSRAVVDGSHIRALKGGPKTGRSPVDRGRAGSKHHLITDATGIPLAVTLTGGNRNDVTQLVPLLQAVPPVRGKHGRPRRRPDVVLGDRGYDHDKYRRLVRDLGVKPLIARRGTEHGSGLGTQRWVVERAFAHLHWFRRLRIRWEIRDDIHEAFLALGCALICWRRLRVLASDVVS
>NZ_CP045643.1|WP_153292530.1|8712706_8713051_+|DUF2750-domain-containing-protein
MSQSGSQAAAFFRDVRQSGVVWLVRDDDGSPAPLSADGTRSLPFWSTSARAQRAAKIWGHGLRVESTLLEGWCDRELPDAAREGLMIGINWSGPRLVGWSFTPMEVLNRLAAAD
>NZ_CP045643.1|WP_153292529.1|8711751_8712270_+|hypothetical-protein
MVRYVHFQLATIFEVGAAIGVTAPVVLGVHGLPQSNYALPLLCVLGASALFGLLAVSTRSGWLGGEKRDFENAVPLADPETVLPAPRESMRRSFDGSFVVIVALPTLVFGLLWGPWVISWGLFFVPERIVKGVYMFFWERRHGVLLWRGKVEEQPLGKDQFLYSSPRIATLG
>NZ_CP045643.1|WP_153292528.1|8710435_8711050_-|hypothetical-protein
MYEDWFEDDELNTEQKAFVDVVRESARSWPECDPMDTVALVFEPEEEEADGRAAAQESQWEPPAEHAAYYAALDEAIARGDERVTLIVDLVDRHEGRKSSVFMCVGATILGDRVFCSERHTQNWQDPEPTRHVQPLTSAGPPKHLGRIAAAWFEKIVHSAIIAGRGGLRFVPQGTALPPSHRWVRNGPRNDPSDRPYLKPALRP
>NZ_CP045643.1|WP_153292527.1|8709662_8710184_-|hypothetical-protein
MTRNGSFGETWARLTEWLAVMAPESLAAVRPPVAREGILPELGELYAHCDGTLPTEAGRFLVSGCGLLSVEESVSLRARLVSLVDGPDVEADWWRLDWVPWAANHDGASCLFVDTGPGPGRGAIGYFFQESGGEAQLWPSLTAFLVALADAVEEGTSFVGETPVVNGGALGWD
>NZ_CP045643.1|WP_153292526.1|8707083_8707443_+|hypothetical-protein
MGGSLLVGAALGLVLGAVLALAPGRLTSHGLVRRLLAGAVAGTLFLGEVVVSAEGGILPVLVMLMAIPVVGVLAAACSGDIAGSSRRHAWLWSRTLLRADFRALAWRGRLRAAVDLLWN
>NZ_CP045643.1|WP_153293318.1|8706486_8706708_+|DUF397-domain-containing-protein
MRNGTRASSLGVRWVKSRHSNAEGNCVEVAPLHEGGVALRNSRDPDGPALIYTAAELAAFLAGAKDGEFDHLV
>NZ_CP045643.1|WP_153292525.1|8705688_8706345_-|ATP-binding-protein
MDNSSGVNRTVGAPDLTSHQGDAVSLSARQAPSPAGGRAAPRAGRTLPAGLPVDGAPDRVPGQERAGRVEPTGDVPRSASLRITESPQGFAQARDFTRRTLGRWALGDRSDDAVLVVTELATNALLHAAPQARAGQSGVWLKLTLRRAHVVCAVTDQSDSPPLCPRTDGALEVHGRGLRIVEALSEHWGWTRSPAGKTVWAMLPAPPRHTSPAWQGPA
>NZ_CP045643.1|WP_153292533.1|8717938_8718913_+|ATP-dependent-DNA-ligase
MTWTLPDPMLTSPTPLPRLTPGWTGEPKWDGFRALLHTDAGQVVLRSRRGTEMSPAFPDIAAAAVQLPDATALDGELVVWEDDRLAFERLQNRLQRRGAAAAQAAQDWPAHFVAFDLLRLSGTDTTAWPYQRRRAALESVFTSWGLTAPWTLSPSTTNPDSIREWLTWTTVGIEGVVFNRLNEPYRPAARSCRKYEVRETTEAIAGAITSQLSTRTTLLLGRYNNHKQLQYIGRTTTLPHTAGSAVAGLLTAAPAGHPWTGWSFSAGWGSRETLDVTMVEPELVVEVSADVARDPVGRWRHPARWHRARTDLTPNDIPRSATSP
>NZ_CP045643.1|WP_153292534.1|8718985_8719876_-|helix-turn-helix-domain-containing-protein
MAEALGDGTGDPLGRELSSLLRAWWENSVQAQGRKPTQEALARQIGVTQATLSRYLSPAHPLMAPADTVRVLHAALGAPPEELEKAVALACGVRSEQRPTASALMPARKRRLPEGRGARRNLAIAAMMAGALIAVWSVGRTVLETGRTVKPVAAPAHPNATQWPLVRKGETSSLTWTVQRLLKAHHHQLRTDGIFGSETRAQVIAFQKKRGLQPDGKVGKDTWPMLVLPASPGDTGPQVEAVQDLLHRAGQPSDITGVYTAATQRMVRSFQRQQGLPDTGAVDEKTWLSLTSTEPT
>NZ_CP045643.1|WP_153292535.1|8720132_8720786_+|L,D-transpeptidase-family-protein
MPKNPSSGVRAALIGASALAALASGLMTAPSHAAAPTGPTPGRHGIPLADHTFSRIDPHTTLKFIRNRNNPRHSLLQVVRYGRVAVQFRAGSGAGLGERKDAGRNECASGKGWLPKGTYTVGTPDTRYNGDLIKGYAIPLSDKACTNGTKRTQLFIHSEMTRAGGQAPAVPGKDVRQRWDHDYDYESAGCIKLTPGNIKKLFRNLARFPLPTKLTVI
>NZ_CP045643.1|WP_153292536.1|8721246_8721831_+|hypothetical-protein
MVTVEVTAAAVEQRLSAGELSCPDCGGVLARWGWGRLRGLRGPDGVVSVRPRRARCRDCEATHILLPVLSLVRRADAVEVVGAGLELAAAGWGCRRIAERLGRPVTTVRGWLRCWSRRVGRTAAVFTSLLVALADDPAAMLPTAAGSAAQDAVCAVTGFAFAARARLEMLKVPTWLLVSAACHGRLLAPGWPPA
>NZ_CP045643.1|WP_153292537.1|8723351_8723681_-|hypothetical-protein
MTDHPKTGLGDVLAHVANCDHDGEEPDLSGGRRVEYVVTGIRGALVDARAVEDPTKKYVSTAAVLAQNLKTEVGSLPGCHFSCRVVPGNPGTFFVDFQMAPEPGAQASA
>NZ_CP045643.1|WP_153292538.1|8725687_8726128_+|hypothetical-protein
MHRTTLKMLVGLAPFLLLTGCVGSQPTTKVAVDRITGSWAGPHGEKFTISADRTFTTSGLDSKKLAVTRCPGKPSEGGWSFYVSEGHGTEIGEKTAKSGSWIGLSFHGAAENCHFDLAVVDGGKALCATDDRDLPCGLDVKFTRRS
>NZ_CP045643.1|WP_153292539.1|8727452_8728429_-|IS5-family-transposase
MTRRQLTNAQWKFIEPYLPIGRYGPYPERLREQFEGVIWRFRSSGQWREMPAEFGPWATVYGRFRVWRDAAVFTDLLEGLIAEGARMGRTDLSLVSVDSTTVRAHHDAAGLRVSKHLMEALEEAAQEQEAARPKRGGPEEQNGHTERRRVRRRHKLRLREALLGRSRGGLTSKIHLAADRRCRPLALVLTVGQAGDSPQFVPVLAKVRIRLPAGRPRTKPGAVAADKAYSSHGNRAYLRKRGIKAVIPEKRDQAANRKKKGTRGGRPVSHDADLYKERNTVERLINKLKAWRGIATRYDKTPDSYLAGLHLRAAMIWIDDLIKTT
>NZ_CP045643.1|WP_153292540.1|8728588_8729710_+|IS630-family-transposase
MVAEPVRVRRLTDQEKQTLQRIVRRGSTSSVGFRRAMMLLASAGGNRASAIAQLVQADEDTVRDVIHRFNEIGLACLDPQWAGGRPRLLTPDEEDFVVQMATTRPTKLGQPFTRWSIRKLAACLRKVRGRVIRIGREALRCLLARRGITFQRTKTWKESPDPDRDTKLDRIEHVLHHFPDRVFAFDEFGPLGIRPTMGSDWAPAGHPERHPATYHRTHGVRYFHGCYSISDDTIWGVNRRKKGAVNTLAAFRSIRAARPDGAPIYVILDNLSAHKGDKIRRWAKKNRVELCFTPTYASWANPIEAHFGPLRQFTIANSHHCNHTVQTRALHAYLRWRNTNARHPDVLAAQRRERARIRSEKGIRWGGRPAVAA
>NZ_CP045643.1|WP_153292541.1|8729735_8730293_-|hypothetical-protein
MAGPTLVIEFAEPVSSTALTEFSALMRGISTHFEQRRNGYFDVNVPVERLGMEVPTAHDAQGVDGQRPFLVYLMGPEVGDESIFEAEHADEPEVEAVLGFRPTHAVNVSAGCNRGIDHAATALLAAAVVDVLGGVVKAELLEGQEAVVAGLPGVLGFTHEEYPMVLGTAEFLRAWVDQPGFRLVK
>NZ_CP045643.1|WP_153292542.1|8730808_8731785_-|IS5-family-transposase
MTRRQLTNAQWKFIEPYLPIGRYGPYPERLREQFEGVIWRFRSSGQWREMPAEFGPWATVYGRFRVWRDAAVFTDLLEGLIAESARMGRTDLSLVSVDSTTVRAHHDAAGLRVSKHLMEALEEAAQEQEAARPKRGGPEEQNGHTERRRVRRRHKLRLREALLGRSRGGLTSKIHLAADRRCRPLALVLTVGQAGDSPQFVPVLAKVRIRLPAGPPRTKPGAVAADKAYSSHDNRAYLRKRGIKAVIPEKRDQAANRKKKGTRGGRPVSHDADLYKERNTVERLINKLKAWRGIATRYDKTPDSYLAGLHLRAAMIWIDDLIKTT

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Crispr_ID: NZ_CP045643_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045643_16

8871954-8872077

Orphan

Consensus_repeat	Method
CGCACGACCCGCACGACCCGCACGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP045643_16

>merge|NZ_CP045643|16|8871954-8872077|CRISPRCasFinder
CCGGCCGGCCGCACCACCCGCACGGCGCGGACGACCCGCACGACCCGCACGACCCGCACGGCGCGGACAGCACCGGCGGCGCGGACAGCACCGGCGGGATCGACGGCACGCACGACCCGCACGA

>NZ_CP045643|16|12|8871954-8872077|CRISPRCasFinder
CCGGCCGGCCGCACCACCCGCACGG	CGCGGACGACCCGCACGACC
CGCACGACCCGCACGGCGCGGACAG	CACCGGCGGCGCGGACAGCACCGGCGGGA
TCGACGGCACGCACGACCCGCACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045643.1\|WP_153292622.1\|8855473_8855866_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378714
NZ_CP045643.1\|WP_153292626.1\|8867432_8868407_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176870
NZ_CP045643.1\|WP_153292627.1\|8868437_8869967_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045643.1\|WP_153292625.1\|8865761_8866637_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276938
NZ_CP045643.1\|WP_153292624.1\|8862645_8863335_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP045643.1\|WP_153292632.1\|8876759_8878352_+\|methylmalonyl-CoA-carboxyltransferase	unknown	unknown	gnl\|CDD\|130187
NZ_CP045643.1\|WP_153292633.1\|8878791_8879616_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276938
NZ_CP045643.1\|WP_153293336.1\|8859390_8860443_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP045643.1\|WP_153292628.1\|8870194_8871181_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225002
NZ_CP045643.1\|WP_153292631.1\|8876534_8876732_+\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP045643.1\|WP_153292620.1\|8850488_8851304_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP045643.1\|WP_153292623.1\|8856440_8857544_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|367638
NZ_CP045643.1\|WP_153292621.1\|8853133_8854807_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225201
NZ_CP045643.1\|WP_153292630.1\|8874713_8875535_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276938

Protein	Function_ID	Function_description	E-value
NZ_CP045643.1\|WP_153292622.1\|8855473_8855866_-\|hypothetical-protein	gnl\|CDD\|378714	pfam11774, Lsr2, Lsr2. Lsr2 is a small, basic DNA-bridging protein present in Mycobacterium and related actinomycetes. It is a functional homolog of the H-NS-like proteins. H-NS proteins play a role in nucleoid organisation and also function as a pleiotropic regulator of gene expression.	2.31285e-13
NZ_CP045643.1\|WP_153292626.1\|8867432_8868407_+\|hypothetical-protein	gnl\|CDD\|176870	cd08861, OtcD1_ARO-CYC_like, N-terminal and C-terminal aromatase/cyclase domains of Streptomyces rimosus OtcD1 and related domains. This family includes the N- and C- terminal aromatase/cyclase (ARO/CYC) domains of Streptomyces rimosus OtcD1 and related domains. It belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. ARO/CYC domains participate in the diversification of aromatic polyketides by promoting polyketide cyclization. They occur in two architectural forms, didomain and monodomain. Didomain aromatase/cyclases (ARO/CYCs), contain two ARO/CYC domains, and are associated with C7-C12 first ring cyclized polyketides. Streptomyces rimosus OtcD1 is a didomain ARO/CYC. The polyketide Oxytetracycline (OTC) is a broad spectrum antibiotic made by Streptomyces rimosus. The gene encoding OtcD1 is part of oxytetracycline (OTC) gene cluster. Disruption of this gene results in the production of novel polyketides having shorter chain lengths (by up to 10 carbons) than OTC. Monodomain ARO/CYCs have a single ARO/CYC domain, and are often associated with C9-C14 first ring cyclizations, these latter domains belong to a different subfamily in the SRPBCC superfamily.	9.34252e-27
NZ_CP045643.1\|WP_153292625.1\|8865761_8866637_+\|hypothetical-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	1.75505e-53
NZ_CP045643.1\|WP_153292624.1\|8862645_8863335_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	9.62197e-13
NZ_CP045643.1\|WP_153292632.1\|8876759_8878352_+\|methylmalonyl-CoA-carboxyltransferase	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP045643.1\|WP_153292633.1\|8878791_8879616_+\|hypothetical-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	1.51985e-50
NZ_CP045643.1\|WP_153293336.1\|8859390_8860443_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	7.92459e-52
NZ_CP045643.1\|WP_153292628.1\|8870194_8871181_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	9.17993e-24
NZ_CP045643.1\|WP_153292631.1\|8876534_8876732_+\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	0.00168185
NZ_CP045643.1\|WP_153292620.1\|8850488_8851304_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	2.4031e-21
NZ_CP045643.1\|WP_153292623.1\|8856440_8857544_-\|transcriptional-regulator	gnl\|CDD\|367638	pfam03756, AfsA, A-factor biosynthesis hotdog domain. The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a HotDog domain.	3.9041e-22
NZ_CP045643.1\|WP_153292621.1\|8853133_8854807_+\|hypothetical-protein	gnl\|CDD\|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	1.96499e-17
NZ_CP045643.1\|WP_153292630.1\|8874713_8875535_-\|hypothetical-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	9.57437e-60

>NZ_CP045643.1|WP_153292628.1|8870194_8871181_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MPDLPGLPDLPGLPGLPRGAGLRGGGAPDLPGAAGPAGAVGAVADGAGSGVPLGPPLHVAGPEGPWEEVHDQLADRGHVLVHTTWGQWLAAALLDPGLRDLLGRDWPRYRQTAAPAGRLRFAASRMVLKHTAAAALHLPADALDLAYRPGGRPQLRGLAGVEVSLAHTDELIVVAVSRTGPIGVDAEPVTRRPSFDLLHPYVCTPAEAAGLAALPEDDRTARLLHLWTLKEAYTKALGHGMRRRFAAFGFSRDEQGRTVLLDEPAGAPRWILATHLVHDRYLVSVAHRPLRPVETASRPAAHPLEETRLPPAATLGWPLPGSSGAQPT
>NZ_CP045643.1|WP_153292627.1|8868437_8869967_+|hypothetical-protein
MAVTRPAVPAVLPAARLSGRGHGPAAPGSRRAVAHRYAALPPPLEVALAALRLEALLGDPWDAANPYGLPALTTTRTTGTDGTDGSDGSDGSDGSGAGEERAGLPAAAGLGRIRAADQLVRALRPVLRRDVALGAALAAALRPCPVPAALLGPAALLAATGTVLRQAARIVAGRCHGEPALRQWRPVLATVFADLLACESLTSVALRGPARPGALLPAVAGYVVPTVVADVLAQLELVLTECGHGPAGPEGRLLAKLIGDLPAAGVDAAAAGAWQTHLVRALPALALAPAESPRPPHTTALPALFRLADPHPHLSDPDPGPGLSGSDPDLCGPGPGPASVPGAGRPDGYGPDGYGLDGYAGAGESGDDGVVLSGLLRAAARPAGADAEGAALAGVARRLLSEQRALRRPCRTAGRDGVDGPAVRALADRQALLWLAAAVLGVQEAADDGRGLFLGGPHWALLALSGITERLGVPLPGPAPDPREQVWAELADRVRHGVDCDVYATRLLW
>NZ_CP045643.1|WP_153292626.1|8867432_8868407_+|hypothetical-protein
MSSRVHAGEDAVEVAAPAGVVYGLLADAVRWPVFLPSYVHVERLDFDGTQERLLVWEVADEAGAPGGHVRSWHTRRVLRPQDRTVVFEQEDQARPGLVTSGVWTVRPAGETRCVLALRQERVLPVLLAADDSRLRADADADVRSRLGLLRGAAEQWEELDELLLSFEDRIRVEGPAELVYDFLYRIEGWEERLPHVEGTRVREDAPGVQVVLADTCGAQGGTVTTRAVRLCFPHAGRIVYKETLTPRLLAAHSGEWSLLPDASGVTVVSAHRVMLRQDAVARELGENTSLLEARRHVHGWLSRADRQALDLAKWHAESTVRRLR
>NZ_CP045643.1|WP_153292625.1|8865761_8866637_+|hypothetical-protein
MDTDILGTLAVREKGISITPTAPKPRQVLALLVLHADQMVPVGMLSEELWGARPPRSARPTLQTYILQLRELITAALERDPGGRRTAKDVLLTVPGGYLLKSGEGSSDVREFERLAGLGYRAMDGADFPEAARHLRAALALWSGPPLADVQAGPHLATQVKRLEESRLCALDQRIEADLRLGRHRELLAELTVLVSRYPTHESLCGQYMLALYRSGRRGEALDAYQRLRATLVRGLGLEPSAALGKLQRSILMARPDGSPAAANATAGSGSGSGAPGTGPAGSGRLAAPVG
>NZ_CP045643.1|WP_153292624.1|8862645_8863335_+|TetR-family-transcriptional-regulator
MVRQERAIRTRRAILNAAASVFDERGYEAATIGEVLTRAGVTKGALYFHFPSKQALAEGVLAEQFSGFVLAPRASKLQELVDMGLALAYRMRRNPVVSASARLSLGQEMGVIFGTWTITTWLEATEKVLREAREQGELLPHVDPAESAWVFSAAWTGVQVYSHTLAGREDLERRVSALFEHLLPSIAVPAVLGKLVTDPARAAEVAAEGERLAAEAGELGDLDEVAAPA
>NZ_CP045643.1|WP_153293336.1|8859390_8860443_+|cytochrome-P450
MASAFTARRVALLGPRVEEIAGGLLDGVEEAAGRAAGGVVDVRELFALPLPGRVMLELFGIPEEFRGPLREIIDGFFDTAVSSGEAQRNYRALYSTMGELVAFKRRCPGEDLTSALIAAGGGGAAADGADGAGGAEGAGGSGGSGGVGGLEGVGGSGGVGGGGLSEKELVDNLIMLLSAGCEPTVNLLGNAVALLLGDPGQLELVRSGRVSWGDVVEEAVRVEAPGANAILRYAVEDVRVGETVIERGDALVMSFAAAGRDPGVHGPDAGVFDVTRGTRREHLSFGHGVHYCLGAPLARLEAEIALRALFGRFPRMRAAFRPGELPRTESFISNGPRVLPVVPGPAAAAV
>NZ_CP045643.1|WP_153292623.1|8856440_8857544_-|transcriptional-regulator
MTLLTVHQDNHPTPQPTPTPPPNPNPAPTTPMPRLTTTVPREYVHRSSLAEVFLTGSEKTGDNHYTLTAQWPRTHTFYTTPDNTHHDPLQAAETIRQTGLYLAHAELGVPLDHHFLMWNIHLTTHPQHLTIGPTPTDLTLTATCTTLRYKGKRLADFTMHITITRDGHTTATGGGQFTCLTPTTYQRLRQPHTTQPTPTPQTQPTTPTNPTNPTDPTPYGRHLPLDLVLTPTPQPHTWQLTPNPHHPILFDHTTDHIPGMVLLEAARQATHTHTHPTPTHLTTLHATFHRYTEHHTPTYITTTHTPTTADTTTGTGTAADTTTDTRTAADTETTTDTTTPTGTHTTHITATQNNTTVFTAHITTTPH
>NZ_CP045643.1|WP_153292622.1|8855473_8855866_-|hypothetical-protein
MTLEETQPSAELDCPFWHRERVPITAERDGLYGTFFDTLNETIGTWAEARLPEEGVYASLFAFFQEAADRLEGISSGDWRGPGRPARPRRFDPRPDDERIRLWARTNGYLVNDRGRIPASIREAYEVSQR
>NZ_CP045643.1|WP_153292621.1|8853133_8854807_+|hypothetical-protein
MARTPWGRRRLDRRLREHWQRATGHKDWGDDRIGTLLEGLGLSYPSDLEVRRLAAIPPGVELRATEVEEAWNQPDSPFRHVHITLGLLESLNRVGLVHITKDDDGGRWLTVPEGLHERLRSRWSAGEEADWHEQLVHNAFLLLKPGDPWWSLPAGAGYWWRHLVWHLRYCDPAQAAALVTFPGWQIAKIQRLGAQSLLADLALVDSPESRETASVINEVMGAEEHGSQLDPGKRAELLRALSPGPVPLPRADAGHHAGQQKSAVAGQPGGRQLSAVRGVLQLPRSTFGFALSPDGTWLVAVGDGGLVNVYDVETQDLRRVIRSPYDRLYDCAVSPDGSFIMTSAVGEKAQAWDAVSGEERLPFKVGTVGESVYGPDGMWVAYNSFTGSFVDPLTNERRGTKPTSKGMSHLALAADGSTLATRGRDSQVLLWDPRSGRLLAKLPDQPHSVHRIGLAGDGSWIAVGGPYDLRVLELPGNRERFTLEQNGTRFATTENWLAVPAARHVQIRSTRTGELLDTLEAHTDVVLDCRTSPDREHLMTFDRSGTLIVWDAAAIVP
>NZ_CP045643.1|WP_153292620.1|8850488_8851304_+|helix-turn-helix-domain-containing-protein
MATTLAGPRGAPLPLFCRPISENSQTEKTAEPRDTSHAHLAGEVIGRHQHGYHQLLYVSAGVLAVQTGEASWVASSARAVWIPAGIWHQHRVHGHSSVHTLGFAAHDVLLRSRAPVVVAVDTLVRELIIACSEPSLPQQEARHLRAVLRDRLRRALVEPLTLPTPNNSLLRQACALVAGDLRQPRTAAWLARSIGVSERTLARLFRSEFGMTYPQWRTNVRVFHAMVLLAEGASVSETGRQCGWATTSAFIDTFSRTMGQTPGTYRLAPGG
>NZ_CP045643.1|WP_153292630.1|8874713_8875535_-|hypothetical-protein
MRIQVLGPLNAEVNGGSIVPSAGKPRQILSLLALYPGRVMPVPTLMEEIWATQPPQSALTTLQTYILQLRRRLGTAMGPGAPGGAKEVLATRHGGYLLQIPPDSVDVHQYDRLTREGQVAFESGDDEVSAARFREALGLWEGPALVDVRLGPVLEIEVVRLEESRLVTVERRIDADLRLGRHAELIAELIELTARHPQHEGLHSQAMVALYRSGRQASALEVYRRLRVRLIEDLGVEPSPQLQRLHQAVLTVDPQLDVLAGPRHSSTYDLFTA
>NZ_CP045643.1|WP_153292631.1|8876534_8876732_+|acyl-CoA-carboxylase-subunit-epsilon
MGTPDQYEPVLRVERGRAGEEELAAPTVVPLALGAGGAPARRDRPLNGSRWWRRPRAYRGPRGRQ
>NZ_CP045643.1|WP_153292632.1|8876759_8878352_+|methylmalonyl-CoA-carboxyltransferase
MATTTAPAPVEPGPTDIRGRVAELHAIREAARLGPSEKATAAQHAKGKLTARERIALLLDENSFQEVEQLRRHRATGFGLEAKKPYTDGVITGWGTVEGRTVFVYAHDFRIFGGALGEAHATKIHKIMDMAIAAGAPLVSLNDGAGARIQEGVSALAGYGGIFQRNTKASGVIPQISVMLGPCAGGAAYSPALTDFVFMVRETSQMFITGPDVVKAVTGEEISQNGLGGADVHAETSGVAHFAYDDEETCLAEVRYLLAMLPQNNRENPPHTTAHDPAGRRGEILLDLVPADGNRPYDMTKVIEELVDDGDYLEVHERWARNIICALARLDGQVVGIVANQPQTLAGVLDIEASEKAARFVQMCDAFNIPILTLLDVPGFLPGVDQEHGGIIRHGAKLLYAYCNATVPRISLILRKAYGGAYIVMDSQSIGADLTYAWPTNEIAVMGADGAANVIFRRQIADAADPEAMRARMVKEYKAELMHPYYAAERGLVDDVIDPAETREVLIRSLAMLHAKHADLPSRKHGNPPQ
>NZ_CP045643.1|WP_153292633.1|8878791_8879616_+|hypothetical-protein
MDIDVLGALAVRENGVSITPTAPKPRQVLALLALRADQVVPVAALTEELWGNSPPRSARTTLQTYVLQLRELIAQALEHGRSGAKDVLMTLPGGYLLVSGGGSSDVREFERLAGEGYRAMDQGAFAEAARTLAGALQLWTGPAFADVTAGAQLAMETRRLEESRLCALDQRIEADLRLGRHRELLPELTVLTSRYRTHENLHAQFMLALHRSGRRSESLSVYHQLRATLVNDLGLEPSPRLRRLQHSIQTAAPETASVPAPFDGAGPPAPARAR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045643_2	2.1\|1251924\|17\|NZ_CP045643\|CRISPRCasFinder	1251924-1251940	17	NZ_CP045643.1	1251964-1251980	1	0.941
NZ_CP045643_2	2.1\|1251924\|17\|NZ_CP045643\|CRISPRCasFinder	1251924-1251940	17	NZ_CP045643.1	3806307-3806323	1	0.941
NZ_CP045643_2	2.1\|1251924\|17\|NZ_CP045643\|CRISPRCasFinder	1251924-1251940	17	NZ_CP045643.1	6961849-6961865	1	0.941
NZ_CP045643_2	2.1\|1251924\|17\|NZ_CP045643\|CRISPRCasFinder	1251924-1251940	17	NZ_CP045643.1	7839734-7839750	1	0.941
NZ_CP045643_12	12.1\|6297681\|35\|NZ_CP045643\|CRISPRCasFinder	6297681-6297715	35	NZ_CP045643.1	6297722-6297756	1	0.971
NZ_CP045643_7	7.1\|3586327\|19\|NZ_CP045643\|CRISPRCasFinder	3586327-3586345	19	NZ_CP045643.1	4873561-4873579	2	0.895
NZ_CP045643_11	11.7\|4511637\|19\|NZ_CP045643\|CRT	4511637-4511655	19	NZ_CP045643.1	4792097-4792115	2	0.895
NZ_CP045643_11	11.7\|4511637\|19\|NZ_CP045643\|CRT	4511637-4511655	19	NZ_CP045643.1	4928562-4928580	2	0.895
NZ_CP045643_16	16.1\|8871979\|20\|NZ_CP045643\|CRISPRCasFinder	8871979-8871998	20	NZ_CP045643.1	3025095-3025114	2	0.9
NZ_CP045643_16	16.1\|8871979\|20\|NZ_CP045643\|CRISPRCasFinder	8871979-8871998	20	NZ_CP045643.1	6776686-6776705	2	0.9
NZ_CP045643_16	16.1\|8871979\|20\|NZ_CP045643\|CRISPRCasFinder	8871979-8871998	20	NZ_CP045643.1	7294235-7294254	2	0.9

1. spacer 2.1|1251924|17|NZ_CP045643|CRISPRCasFinder matches to position: 1251964-1251980, mismatch: 1, identity: 0.941

tggcggggcacggcggc	CRISPR spacer
tggcggggcacggtggc	Protospacer
*************.***

2. spacer 2.1|1251924|17|NZ_CP045643|CRISPRCasFinder matches to position: 3806307-3806323, mismatch: 1, identity: 0.941

tggcggggcacggcggc	CRISPR spacer
tggcggggcccggcggc	Protospacer
********* *******

3. spacer 2.1|1251924|17|NZ_CP045643|CRISPRCasFinder matches to position: 6961849-6961865, mismatch: 1, identity: 0.941

tggcggggcacggcggc	CRISPR spacer
tggcggcgcacggcggc	Protospacer
****** **********

4. spacer 2.1|1251924|17|NZ_CP045643|CRISPRCasFinder matches to position: 7839734-7839750, mismatch: 1, identity: 0.941

tggcggggcacggcggc	CRISPR spacer
tggcggggcccggcggc	Protospacer
********* *******

5. spacer 12.1|6297681|35|NZ_CP045643|CRISPRCasFinder matches to position: 6297722-6297756, mismatch: 1, identity: 0.971

tccggaacggagccggagggggccggagcggagcc	CRISPR spacer
tccggaacggagcgggagggggccggagcggagcc	Protospacer
************* *********************

6. spacer 7.1|3586327|19|NZ_CP045643|CRISPRCasFinder matches to position: 4873561-4873579, mismatch: 2, identity: 0.895

tcggccgggcagccggtct	CRISPR spacer
tcggcccggcggccggtct	Protospacer
****** ***.********

7. spacer 11.7|4511637|19|NZ_CP045643|CRT matches to position: 4792097-4792115, mismatch: 2, identity: 0.895

gttcgcgccccggcctccg	CRISPR spacer
gttcgcgccccgacctgcg	Protospacer
************.*** **

8. spacer 11.7|4511637|19|NZ_CP045643|CRT matches to position: 4928562-4928580, mismatch: 2, identity: 0.895

gttcgcgccccggcctccg	CRISPR spacer
gtgcgcgccccggtctccg	Protospacer
** **********.*****

9. spacer 16.1|8871979|20|NZ_CP045643|CRISPRCasFinder matches to position: 3025095-3025114, mismatch: 2, identity: 0.9

cgcggacgacccgcacgacc	CRISPR spacer
cgcggacgacccggaccacc	Protospacer
************* ** ***

10. spacer 16.1|8871979|20|NZ_CP045643|CRISPRCasFinder matches to position: 6776686-6776705, mismatch: 2, identity: 0.9

cgcggacgacccgcacgacc	CRISPR spacer
cgagggcgacccgcacgacc	Protospacer
** **.**************

11. spacer 16.1|8871979|20|NZ_CP045643|CRISPRCasFinder matches to position: 7294235-7294254, mismatch: 2, identity: 0.9

cgcggacgacccgcacgacc	CRISPR spacer
cgcggacgacccggccgacc	Protospacer
*************  *****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045643_7	7.1\|3586327\|19\|NZ_CP045643\|CRISPRCasFinder	3586327-3586345	19	NZ_CP015740	Shinella sp. HZN7 plasmid pShin-04, complete sequence	95280-95298	0	1.0
NZ_CP045643_7	7.2\|3586374\|19\|NZ_CP045643\|CRISPRCasFinder	3586374-3586392	19	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	547912-547930	0	1.0
NZ_CP045643_16	16.1\|8871979\|20\|NZ_CP045643\|CRISPRCasFinder	8871979-8871998	20	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	232636-232655	1	0.95
NZ_CP045643_13	13.4\|7130247\|27\|NZ_CP045643\|CRT	7130247-7130273	27	NC_022536	Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence	133676-133702	4	0.852
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP021133	Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence	45141-45167	4	0.852
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	141017-141043	4	0.852
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	KM083128	Mycobacterium phage Sparky, complete genome	13685-13711	4	0.852
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_HG938357	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence	122615-122641	4	0.852
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	162006-162032	4	0.852
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	156511-156537	4	0.852
NZ_CP045643_13	13.11\|7130598\|27\|NZ_CP045643\|CRT	7130598-7130624	27	NC_022536	Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence	133676-133702	4	0.852
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP021133	Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence	45141-45167	4	0.852
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	141017-141043	4	0.852
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	KM083128	Mycobacterium phage Sparky, complete genome	13685-13711	4	0.852
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_HG938357	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence	122615-122641	4	0.852
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	162006-162032	4	0.852
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	156511-156537	4	0.852
NZ_CP045643_8	8.1\|3763274\|26\|NZ_CP045643\|CRISPRCasFinder	3763274-3763299	26	NZ_CP013298	Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence	38000-38025	5	0.808
NZ_CP045643_13	13.4\|7130247\|27\|NZ_CP045643\|CRT	7130247-7130273	27	NC_012849	Ralstonia pickettii 12D plasmid pRp12D02, complete sequence	141821-141847	5	0.815
NZ_CP045643_13	13.4\|7130247\|27\|NZ_CP045643\|CRT	7130247-7130273	27	MT843275	Serratia phage vB_SspM_BZS1, complete genome	44795-44821	5	0.815
NZ_CP045643_13	13.4\|7130247\|27\|NZ_CP045643\|CRT	7130247-7130273	27	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	230367-230393	5	0.815
NZ_CP045643_13	13.4\|7130247\|27\|NZ_CP045643\|CRT	7130247-7130273	27	MT840191	Bacteriophage sp. contig_8884 genomic sequence	3507-3533	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NC_019741	Microcoleus sp. PCC 7113 plasmid pMIC7113.05, complete sequence	16609-16635	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	43865-43891	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	231043-231069	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MN694606	Marine virus AFVG_250M830, complete genome	32676-32702	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	AP014502	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C54, * SEQUENCING IN PROGRESS *, 2 ordered pieces	8928-8954	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP017782	Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence	174821-174847	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	811529-811555	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1110992-1111018	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1227098-1227124	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	413298-413324	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	222469-222495	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	339141-339167	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	712722-712748	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	828867-828893	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	70555-70581	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	369978-370004	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	486084-486110	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MN855767	Bacteriophage sp. isolate 11, complete genome	2681-2707	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MH001449	Mycobacterium phage MooMoo, complete genome	21826-21852	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	KU886268	Freshwater phage uvFW-CGR-AMD-COM-C203, complete genome	30203-30229	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	339023-339049	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	678210-678236	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	113314-113340	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP022824	Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-1, complete sequence	198529-198555	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP016850	Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence	41699-41725	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	78999-79025	5	0.815
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	LR745207	uncultured phage genome assembly, chromosome: 1	52227-52253	5	0.815
NZ_CP045643_13	13.11\|7130598\|27\|NZ_CP045643\|CRT	7130598-7130624	27	NC_012849	Ralstonia pickettii 12D plasmid pRp12D02, complete sequence	141821-141847	5	0.815
NZ_CP045643_13	13.11\|7130598\|27\|NZ_CP045643\|CRT	7130598-7130624	27	MT843275	Serratia phage vB_SspM_BZS1, complete genome	44795-44821	5	0.815
NZ_CP045643_13	13.11\|7130598\|27\|NZ_CP045643\|CRT	7130598-7130624	27	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	230367-230393	5	0.815
NZ_CP045643_13	13.11\|7130598\|27\|NZ_CP045643\|CRT	7130598-7130624	27	MT840191	Bacteriophage sp. contig_8884 genomic sequence	3507-3533	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NC_019741	Microcoleus sp. PCC 7113 plasmid pMIC7113.05, complete sequence	16609-16635	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	43865-43891	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	231043-231069	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MN694606	Marine virus AFVG_250M830, complete genome	32676-32702	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	AP014502	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C54, * SEQUENCING IN PROGRESS *, 2 ordered pieces	8928-8954	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP017782	Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence	174821-174847	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	811529-811555	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1110992-1111018	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1227098-1227124	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	413298-413324	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	222469-222495	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	339141-339167	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	712722-712748	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	828867-828893	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	70555-70581	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	369978-370004	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	486084-486110	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MN855767	Bacteriophage sp. isolate 11, complete genome	2681-2707	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MH001449	Mycobacterium phage MooMoo, complete genome	21826-21852	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	KU886268	Freshwater phage uvFW-CGR-AMD-COM-C203, complete genome	30203-30229	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	339023-339049	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	678210-678236	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	113314-113340	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP022824	Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-1, complete sequence	198529-198555	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP016850	Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence	41699-41725	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	78999-79025	5	0.815
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	LR745207	uncultured phage genome assembly, chromosome: 1	52227-52253	5	0.815
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	KT997836	Uncultured Mediterranean phage uvDeep-CGR0-AD1-C123, complete genome	31635-31663	5	0.828
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1433934-1433962	5	0.828
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_012521	Rhodococcus opacus B4 plasmid pROB02, complete sequence	75190-75218	5	0.828
NZ_CP045643_13	13.4\|7130247\|27\|NZ_CP045643\|CRT	7130247-7130273	27	NC_048047	Caulobacter phage CcrBL9, complete genome	69349-69375	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	838632-838658	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	301895-301921	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MT818419	Mycobacterium phage Lolalove, complete genome	33501-33527	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MK524486	Mycobacterium phage Waleliano, complete genome	33490-33516	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MK468591	Mycobacterium phage Arissanae, complete genome	33913-33939	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MH513970	Mycobacterium phage Hangman, complete genome	33487-33513	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NC_042034	Mycobacterium phage ChrisnMich, complete sequence	32455-32481	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	KF493881	Mycobacterium phage JAMaL, complete genome	33674-33700	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	MT310870	Mycobacterium phage RawrgerThat, complete genome	33492-33518	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NC_028968	Mycobacterium phage BrownCNA, complete genome	33756-33782	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	82215-82241	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP008817	Ochrobactrum anthropi strain OAB plasmid 1, complete sequence	28037-28063	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NC_012849	Ralstonia pickettii 12D plasmid pRp12D02, complete sequence	141821-141847	6	0.778
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_MF600313	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence	227681-227707	6	0.778
NZ_CP045643_13	13.9\|7130493\|30\|NZ_CP045643\|CRT	7130493-7130522	30	NZ_CP017148	Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence	211476-211505	6	0.8
NZ_CP045643_13	13.11\|7130598\|27\|NZ_CP045643\|CRT	7130598-7130624	27	NC_048047	Caulobacter phage CcrBL9, complete genome	69349-69375	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	838632-838658	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	301895-301921	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MT818419	Mycobacterium phage Lolalove, complete genome	33501-33527	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MK524486	Mycobacterium phage Waleliano, complete genome	33490-33516	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MK468591	Mycobacterium phage Arissanae, complete genome	33913-33939	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MH513970	Mycobacterium phage Hangman, complete genome	33487-33513	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NC_042034	Mycobacterium phage ChrisnMich, complete sequence	32455-32481	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	KF493881	Mycobacterium phage JAMaL, complete genome	33674-33700	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	MT310870	Mycobacterium phage RawrgerThat, complete genome	33492-33518	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NC_028968	Mycobacterium phage BrownCNA, complete genome	33756-33782	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	82215-82241	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP008817	Ochrobactrum anthropi strain OAB plasmid 1, complete sequence	28037-28063	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NC_012849	Ralstonia pickettii 12D plasmid pRp12D02, complete sequence	141821-141847	6	0.778
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_MF600313	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence	227681-227707	6	0.778
NZ_CP045643_13	13.16\|7130826\|30\|NZ_CP045643\|CRT	7130826-7130855	30	NZ_CP017148	Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence	211476-211505	6	0.8
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	11380-11408	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	250938-250966	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	251207-251235	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	251345-251373	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	251483-251511	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	252166-252194	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	252304-252332	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	MT451981	Streptomyces phage Vondra, complete genome	36185-36213	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	MT451982	Streptomyces phage Cumberbatch, complete genome	36640-36668	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	MT451980	Streptomyces phage Ignacio, complete genome	37191-37219	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	362613-362641	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	291964-291992	6	0.793
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	236884-236912	6	0.793
NZ_CP045643_1	1.1\|806051\|40\|NZ_CP045643\|CRISPRCasFinder	806051-806090	40	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	226872-226911	7	0.825
NZ_CP045643_13	13.5\|7130292\|36\|NZ_CP045643\|CRT	7130292-7130327	36	MN693746	Marine virus AFVG_250M731, complete genome	33128-33163	7	0.806
NZ_CP045643_13	13.6\|7130346\|27\|NZ_CP045643\|CRT	7130346-7130372	27	NZ_CP026745	Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence	119588-119614	7	0.741
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	242425-242457	7	0.788
NZ_CP045643_13	13.13\|7130679\|27\|NZ_CP045643\|CRT	7130679-7130705	27	NZ_CP026745	Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence	119588-119614	7	0.741
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	242425-242457	7	0.788
NZ_CP045643_13	13.18\|7130952\|39\|NZ_CP045643\|CRT	7130952-7130990	39	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	24487-24525	7	0.821
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	350508-350536	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	460896-460924	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	149320-149348	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	4372-4400	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	279617-279645	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	HM486077	Tsukamurella phage TPA2, complete sequence	40834-40862	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_015210	Tsukamurella phage TPA2, complete genome	40834-40862	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP016082	Streptomyces sp. SAT1 plasmid unnamed2, complete sequence	21742-21770	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	693695-693723	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP045412	Roseovarius sp. THAF8 plasmid pTHAF8_b, complete sequence	77926-77954	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	601379-601407	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP045406	Roseovarius sp. THAF9 plasmid pTHAF9_b, complete sequence	16821-16849	7	0.759
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	68739-68767	7	0.759
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	NZ_CP022416	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence	380599-380631	8	0.758
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	957696-957728	8	0.758
NZ_CP045643_13	13.9\|7130493\|30\|NZ_CP045643\|CRT	7130493-7130522	30	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	240603-240632	8	0.733
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	NZ_CP022416	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence	380599-380631	8	0.758
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	957696-957728	8	0.758
NZ_CP045643_13	13.16\|7130826\|30\|NZ_CP045643\|CRT	7130826-7130855	30	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	240603-240632	8	0.733
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_009339	Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence	80795-80823	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP018075	Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence	143321-143349	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1257660-1257688	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	CP000663	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence	138462-138490	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	686345-686373	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	134943-134971	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	555411-555439	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	170111-170139	8	0.724
NZ_CP045643_16	16.2\|8872024\|29\|NZ_CP045643\|CRISPRCasFinder	8872024-8872052	29	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1969826-1969854	8	0.724
NZ_CP045643_4	4.1\|2344442\|41\|NZ_CP045643\|CRISPRCasFinder	2344442-2344482	41	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	302800-302840	9	0.78
NZ_CP045643_13	13.5\|7130292\|36\|NZ_CP045643\|CRT	7130292-7130327	36	MT776806	Mycobacterium phage MrMiyagi, complete genome	12833-12868	9	0.75
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	MT118296	Pseudomonas phage Epa19, complete genome	25367-25399	9	0.727
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	MT108731	Pseudomonas phage Epa43, complete genome	44547-44579	9	0.727
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	MT108725	Pseudomonas phage Epa5, complete genome	17459-17491	9	0.727
NZ_CP045643_13	13.8\|7130442\|33\|NZ_CP045643\|CRT	7130442-7130474	33	MH992213	Apis mellifera associated microvirus 15 isolate INH_SP_268, complete genome	1663-1695	9	0.727
NZ_CP045643_13	13.8\|7130442\|33\|NZ_CP045643\|CRT	7130442-7130474	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2958707-2958739	9	0.727
NZ_CP045643_13	13.8\|7130442\|33\|NZ_CP045643\|CRT	7130442-7130474	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	361316-361348	9	0.727
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	MT118296	Pseudomonas phage Epa19, complete genome	25367-25399	9	0.727
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	MT108731	Pseudomonas phage Epa43, complete genome	44547-44579	9	0.727
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	MT108725	Pseudomonas phage Epa5, complete genome	17459-17491	9	0.727
NZ_CP045643_13	13.15\|7130775\|33\|NZ_CP045643\|CRT	7130775-7130807	33	MH992213	Apis mellifera associated microvirus 15 isolate INH_SP_268, complete genome	1663-1695	9	0.727
NZ_CP045643_13	13.15\|7130775\|33\|NZ_CP045643\|CRT	7130775-7130807	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2958707-2958739	9	0.727
NZ_CP045643_13	13.15\|7130775\|33\|NZ_CP045643\|CRT	7130775-7130807	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	361316-361348	9	0.727
NZ_CP045643_15	15.1\|8716611\|34\|NZ_CP045643\|CRT	8716611-8716644	34	NZ_CP023738	Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence	71237-71270	9	0.735
NZ_CP045643_13	13.5\|7130292\|36\|NZ_CP045643\|CRT	7130292-7130327	36	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1047350-1047385	10	0.722
NZ_CP045643_13	13.8\|7130442\|33\|NZ_CP045643\|CRT	7130442-7130474	33	NZ_CP013069	Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence	243036-243068	10	0.697
NZ_CP045643_13	13.8\|7130442\|33\|NZ_CP045643\|CRT	7130442-7130474	33	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	73740-73772	10	0.697
NZ_CP045643_13	13.15\|7130775\|33\|NZ_CP045643\|CRT	7130775-7130807	33	NZ_CP013069	Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence	243036-243068	10	0.697
NZ_CP045643_13	13.15\|7130775\|33\|NZ_CP045643\|CRT	7130775-7130807	33	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	73740-73772	10	0.697
NZ_CP045643_13	13.7\|7130391\|33\|NZ_CP045643\|CRT	7130391-7130423	33	NZ_CP049751	Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence	47186-47218	18	0.455
NZ_CP045643_13	13.14\|7130724\|33\|NZ_CP045643\|CRT	7130724-7130756	33	NZ_CP049751	Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence	47186-47218	18	0.455

1. spacer 7.1|3586327|19|NZ_CP045643|CRISPRCasFinder matches to NZ_CP015740 (Shinella sp. HZN7 plasmid pShin-04, complete sequence) position: , mismatch: 0, identity: 1.0

tcggccgggcagccggtct	CRISPR spacer
tcggccgggcagccggtct	Protospacer
*******************

2. spacer 7.2|3586374|19|NZ_CP045643|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagccgatcaacgggcag	CRISPR spacer
gcagccgatcaacgggcag	Protospacer
*******************

3. spacer 16.1|8871979|20|NZ_CP045643|CRISPRCasFinder matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 1, identity: 0.95

cgcggacgacccgcacgacc	CRISPR spacer
cgcggacgacccgcacgaca	Protospacer
*******************

4. spacer 13.4|7130247|27|NZ_CP045643|CRT matches to NC_022536 (Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
ggtggcggtggcggaagtggtggcgct	Protospacer
 ********.****.********** *

5. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP021133 (Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcagcggtagcggtggcggt	Protospacer
 *************.**.********

6. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggcggtggtggcggc	Protospacer
 ********.*****.**********

7. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to KM083128 (Mycobacterium phage Sparky, complete genome) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcagcggcagcggcagtggtggcggg	Protospacer
 *..*.*********************

8. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_HG938357 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
agcggaggcagcggcagtggcggcggg	Protospacer
 *.** **************.******

9. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggccgtggtggcgcg	Protospacer
 ********.***** ********* *

10. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagtggcggcggg	Protospacer
 *.**.**************.******

11. spacer 13.11|7130598|27|NZ_CP045643|CRT matches to NC_022536 (Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
ggtggcggtggcggaagtggtggcgct	Protospacer
 ********.****.********** *

12. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP021133 (Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcagcggtagcggtggcggt	Protospacer
 *************.**.********

13. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggcggtggtggcggc	Protospacer
 ********.*****.**********

14. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to KM083128 (Mycobacterium phage Sparky, complete genome) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcagcggcagcggcagtggtggcggg	Protospacer
 *..*.*********************

15. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_HG938357 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
agcggaggcagcggcagtggcggcggg	Protospacer
 *.** **************.******

16. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggccgtggtggcgcg	Protospacer
 ********.***** ********* *

17. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 4, identity: 0.852

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagtggcggcggg	Protospacer
 *.**.**************.******

18. spacer 8.1|3763274|26|NZ_CP045643|CRISPRCasFinder matches to NZ_CP013298 (Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence) position: , mismatch: 5, identity: 0.808

ggagccgcgtccgggacccgggtata	CRISPR spacer
cccgccgcgtcggggacccggatata	Protospacer
   ******** *********.****

19. spacer 13.4|7130247|27|NZ_CP045643|CRT matches to NC_012849 (Ralstonia pickettii 12D plasmid pRp12D02, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
accggcggcagcggtagtggtggcggt	Protospacer
  .*****.***** ************

20. spacer 13.4|7130247|27|NZ_CP045643|CRT matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
ttcggcggtagcggtggtggtggcggt	Protospacer
. .*********** .***********

21. spacer 13.4|7130247|27|NZ_CP045643|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
ccgcgcggtggcgggggtggtggcggt	Protospacer
*   *****.*****.***********

22. spacer 13.4|7130247|27|NZ_CP045643|CRT matches to MT840191 (Bacteriophage sp. contig_8884 genomic sequence) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
aggggcggtagcgggagtggtagcagg	Protospacer
 * ******************.**.*

23. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NC_019741 (Microcoleus sp. PCC 7113 plasmid pMIC7113.05, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gctggtggcagcggcagtgatggtggt	Protospacer
  *****************.***.**

24. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
cgcggtggcagcggcagtggtgcagac	Protospacer
**.*******************  *.

25. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tgtggtgacagtggcagtggtggcgac	Protospacer
.******.***.*************.

26. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MN694606 (Marine virus AFVG_250M830, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggcggtggtggcgac	Protospacer
 ********.*****.*********.

27. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to AP014502 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C54, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gctggtggcggcggcggtggtggcggt	Protospacer
  *******.*****.**********

28. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP017782 (Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tctggcggcagcggcagtggtgccggc	Protospacer
. ***.**************** ***

29. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacggtggccgcggcggtggtggcggg	Protospacer
 ..****** *****.***********

30. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

31. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

32. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacggtggccgcggcggtggtggcggg	Protospacer
 ..****** *****.***********

33. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

34. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

35. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

36. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

37. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacggtggccgcggcggtggtggcggg	Protospacer
 ..****** *****.***********

38. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

39. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

40. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
actgctggcagcggtagtggtggcggc	Protospacer
  ** *********.***********

41. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MH001449 (Mycobacterium phage MooMoo, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tatggtggcggcggcggtggtggcggc	Protospacer
..*******.*****.**********

42. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to KU886268 (Freshwater phage uvFW-CGR-AMD-COM-C203, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggcggtggtggcgcc	Protospacer
 ********.*****.*********

43. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
atttgttgcagcggcagtgttggcggg	Protospacer
  * ** ************ *******

44. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggtggcggcggcggtggtggcggc	Protospacer
 *.******.*****.**********

45. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gggggtggcggcggcggtggtggcgga	Protospacer
 * ******.*****.**********.

46. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP022824 (Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
cgcggtggcggcggcagtggtgggctg	Protospacer
**.******.*************   *

47. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP016850 (Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggtggcagcggtagcggtggcggt	Protospacer
 *.***********.**.********

48. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
agaggtggcagcggcggtggcggcgga	Protospacer
 * ************.****.*****.

49. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to LR745207 (uncultured phage genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
actgatggcagtggcagtggtggcgag	Protospacer
  **.******.*************.*

50. spacer 13.11|7130598|27|NZ_CP045643|CRT matches to NC_012849 (Ralstonia pickettii 12D plasmid pRp12D02, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
accggcggcagcggtagtggtggcggt	Protospacer
  .*****.***** ************

51. spacer 13.11|7130598|27|NZ_CP045643|CRT matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
ttcggcggtagcggtggtggtggcggt	Protospacer
. .*********** .***********

52. spacer 13.11|7130598|27|NZ_CP045643|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
ccgcgcggtggcgggggtggtggcggt	Protospacer
*   *****.*****.***********

53. spacer 13.11|7130598|27|NZ_CP045643|CRT matches to MT840191 (Bacteriophage sp. contig_8884 genomic sequence) position: , mismatch: 5, identity: 0.815

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
aggggcggtagcgggagtggtagcagg	Protospacer
 * ******************.**.*

54. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NC_019741 (Microcoleus sp. PCC 7113 plasmid pMIC7113.05, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gctggtggcagcggcagtgatggtggt	Protospacer
  *****************.***.**

55. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
cgcggtggcagcggcagtggtgcagac	Protospacer
**.*******************  *.

56. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tgtggtgacagtggcagtggtggcgac	Protospacer
.******.***.*************.

57. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MN694606 (Marine virus AFVG_250M830, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggcggtggtggcgac	Protospacer
 ********.*****.*********.

58. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to AP014502 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C54, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gctggtggcggcggcggtggtggcggt	Protospacer
  *******.*****.**********

59. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP017782 (Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tctggcggcagcggcagtggtgccggc	Protospacer
. ***.**************** ***

60. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacggtggccgcggcggtggtggcggg	Protospacer
 ..****** *****.***********

61. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

62. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

63. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacggtggccgcggcggtggtggcggg	Protospacer
 ..****** *****.***********

64. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

65. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

66. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

67. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

68. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacggtggccgcggcggtggtggcggg	Protospacer
 ..****** *****.***********

69. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggaggtggcagcggaggtggtggcggc	Protospacer
 * *********** .**********

70. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggcggcagcggcagcggtggcggc	Protospacer
 *.**.***********.********

71. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
actgctggcagcggtagtggtggcggc	Protospacer
  ** *********.***********

72. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MH001449 (Mycobacterium phage MooMoo, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tatggtggcggcggcggtggtggcggc	Protospacer
..*******.*****.**********

73. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to KU886268 (Freshwater phage uvFW-CGR-AMD-COM-C203, complete genome) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggtggtggcggcggcggtggtggcgcc	Protospacer
 ********.*****.*********

74. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
atttgttgcagcggcagtgttggcggg	Protospacer
  * ** ************ *******

75. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggtggcggcggcggtggtggcggc	Protospacer
 *.******.*****.**********

76. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gggggtggcggcggcggtggtggcgga	Protospacer
 * ******.*****.**********.

77. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP022824 (Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
cgcggtggcggcggcagtggtgggctg	Protospacer
**.******.*************   *

78. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP016850 (Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ggcggtggcagcggtagcggtggcggt	Protospacer
 *.***********.**.********

79. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
agaggtggcagcggcggtggcggcgga	Protospacer
 * ************.****.*****.

80. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to LR745207 (uncultured phage genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.815

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
actgatggcagtggcagtggtggcgag	Protospacer
  **.******.*************.*

81. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to KT997836 (Uncultured Mediterranean phage uvDeep-CGR0-AD1-C123, complete genome) position: , mismatch: 5, identity: 0.828

caccggcggcgcggacagcaccggcggga	CRISPR spacer
tgcgggcggcgcgcacagcaccggcgaga	Protospacer
..* ********* ************.**

82. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 5, identity: 0.828

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ccgcggcggcgcggagatcaccggcggca	Protospacer
*  ************ * ********* *

83. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 5, identity: 0.828

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgcgggcggcgcggacatcgccggcggca	Protospacer
*.* ************* *.******* *

84. spacer 13.4|7130247|27|NZ_CP045643|CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 6, identity: 0.778

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
acgggcggtagcggtggtggtggcggg	Protospacer
   *********** .**********

85. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
agtggtggcggcggaagtggtggctcc	Protospacer
 ********.**** *********

86. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
cgtggtcgcagcggcggtggtggtcac	Protospacer
****** ********.*******. .

87. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MT818419 (Mycobacterium phage Lolalove, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

88. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MK524486 (Mycobacterium phage Waleliano, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

89. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MK468591 (Mycobacterium phage Arissanae, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tcgggtggcggcggcggtggtggcggt	Protospacer
.  ******.*****.**********

90. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MH513970 (Mycobacterium phage Hangman, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

91. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NC_042034 (Mycobacterium phage ChrisnMich, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

92. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to KF493881 (Mycobacterium phage JAMaL, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

93. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to MT310870 (Mycobacterium phage RawrgerThat, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

94. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NC_028968 (Mycobacterium phage BrownCNA, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

95. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gcaggcggcagcggcagcggtggcgga	Protospacer
   **.***********.********.

96. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP008817 (Ochrobactrum anthropi strain OAB plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tctggtcgcggcggcagtggtggcgct	Protospacer
. **** **.***************

97. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NC_012849 (Ralstonia pickettii 12D plasmid pRp12D02, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
accggcggcagcggtagtggtggcggt	Protospacer
  .**.********.***********

98. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_MF600313 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ccgcgtggcagcggcagtggcggcgct	Protospacer
*   ****************.****

99. spacer 13.9|7130493|30|NZ_CP045643|CRT matches to NZ_CP017148 (Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgagcgtcgtgacggggatcgtccgccg	CRISPR spacer
ggtgagcaccgtgacggggatcgtgtcgcg	Protospacer
*******..*************** .  **

100. spacer 13.11|7130598|27|NZ_CP045643|CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 6, identity: 0.778

cgtggcggtagcgggagtggtggcggt	CRISPR spacer
acgggcggtagcggtggtggtggcggg	Protospacer
   *********** .**********

101. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
agtggtggcggcggaagtggtggctcc	Protospacer
 ********.**** *********

102. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
cgtggtcgcagcggcggtggtggtcac	Protospacer
****** ********.*******. .

103. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MT818419 (Mycobacterium phage Lolalove, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

104. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MK524486 (Mycobacterium phage Waleliano, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

105. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MK468591 (Mycobacterium phage Arissanae, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tcgggtggcggcggcggtggtggcggt	Protospacer
.  ******.*****.**********

106. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MH513970 (Mycobacterium phage Hangman, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

107. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NC_042034 (Mycobacterium phage ChrisnMich, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

108. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to KF493881 (Mycobacterium phage JAMaL, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

109. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to MT310870 (Mycobacterium phage RawrgerThat, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

110. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NC_028968 (Mycobacterium phage BrownCNA, complete genome) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gccggtggcggcggctgtggtggcggt	Protospacer
  .******.***** **********

111. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gcaggcggcagcggcagcggtggcgga	Protospacer
   **.***********.********.

112. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP008817 (Ochrobactrum anthropi strain OAB plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
tctggtcgcggcggcagtggtggcgct	Protospacer
. **** **.***************

113. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NC_012849 (Ralstonia pickettii 12D plasmid pRp12D02, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
accggcggcagcggtagtggtggcggt	Protospacer
  .**.********.***********

114. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_MF600313 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence) position: , mismatch: 6, identity: 0.778

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
ccgcgtggcagcggcagtggcggcgct	Protospacer
*   ****************.****

115. spacer 13.16|7130826|30|NZ_CP045643|CRT matches to NZ_CP017148 (Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgagcgtcgtgacggggatcgtccgccg	CRISPR spacer
ggtgagcaccgtgacggggatcgtgtcgcg	Protospacer
*******..*************** .  **

116. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgccgggggcgccgacagcaccggccgac	Protospacer
*.**** ***** ************ *.

117. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgccgacggcaccgtgcggc	Protospacer
************ ***.******   **

118. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgccgacggcaccgtgcggc	Protospacer
************ ***.******   **

119. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgccgacggcaccgtgcgaa	Protospacer
************ ***.******   *.*

120. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgccgacggcaccgtgcggc	Protospacer
************ ***.******   **

121. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgccgacggcaccgtgcgaa	Protospacer
************ ***.******   *.*

122. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgccgacggcaccgtgcggc	Protospacer
************ ***.******   **

123. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to MT451981 (Streptomyces phage Vondra, complete genome) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgacggcggcgcggacggccccggcgaaa	Protospacer
*. *************.** ******..*

124. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to MT451982 (Streptomyces phage Cumberbatch, complete genome) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgacggcggcgcggacggccccggcgaaa	Protospacer
*. *************.** ******..*

125. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to MT451980 (Streptomyces phage Ignacio, complete genome) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgacggcggcgcggacggccccggcgaaa	Protospacer
*. *************.** ******..*

126. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ccccggcggcgcgggcaccaccggcaagg	Protospacer
* ************.** *******..*.

127. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgcgggcggcgcggacatcgccggcggcg	Protospacer
*.* ************* *.******* .

128. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 6, identity: 0.793

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgcgggcggcgcggacatcgccggcggcg	Protospacer
*.* ************* *.******* .

129. spacer 1.1|806051|40|NZ_CP045643|CRISPRCasFinder matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 7, identity: 0.825

ggtcgcgtccgtctccgccgcggtcgcgtccgccttcgcc	CRISPR spacer
cggcgccgtcgtctcggccgcggacgcgtccgccttcgcc	Protospacer
 * ***  .****** ******* ****************

130. spacer 13.5|7130292|36|NZ_CP045643|CRT matches to MN693746 (Marine virus AFVG_250M731, complete genome) position: , mismatch: 7, identity: 0.806

cgtggcagcagcggcggcagtggcagcagtggcggt	CRISPR spacer
ggcggcagcagcggcggcagcggcagcagcggcttc	Protospacer
 *.*****************.********.***  .

131. spacer 13.6|7130346|27|NZ_CP045643|CRT matches to NZ_CP026745 (Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacgccggcagcggcagtggtggcgat	Protospacer
 ..* .*******************.

132. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 7, identity: 0.788

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
ggcgacgatcgtcgcgacgacgaccgcgaagga	Protospacer
 *.*********** *.***********. **

133. spacer 13.13|7130679|27|NZ_CP045643|CRT matches to NZ_CP026745 (Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

cgtggtggcagcggcagtggtggcggg	CRISPR spacer
gacgccggcagcggcagtggtggcgat	Protospacer
 ..* .*******************.

134. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 7, identity: 0.788

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
ggcgacgatcgtcgcgacgacgaccgcgaagga	Protospacer
 *.*********** *.***********. **

135. spacer 13.18|7130952|39|NZ_CP045643|CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 7, identity: 0.821

cgcgatgac-cgcggcggcgacagccggggcggcggcttc	CRISPR spacer
-gggagggcgggcgacggcgacagccggggcgacggcttc	Protospacer
 * ** *.*  ***.*****************.*******

136. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
tatcggcggcgcgggcggcaccggcgcag	Protospacer
.*.***********.*.********* ..

137. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcagcgcggacagcagcgcgatgc	Protospacer
*******.************ **  . *

138. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ggccggcggcgctggcagcaccggcgcag	Protospacer
 .********** *.*********** ..

139. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
gggcaccggcgcggacggcaccggcggca	Protospacer
 . *. **********.********** *

140. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ggccggcggcgctggcagcaccggcgcac	Protospacer
 .********** *.*********** .

141. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to HM486077 (Tsukamurella phage TPA2, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
gaccggcggcgcggacggcaacggcaccg	Protospacer
 ***************.*** ****.  .

142. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_015210 (Tsukamurella phage TPA2, complete genome) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
gaccggcggcgcggacggcaacggcaccg	Protospacer
 ***************.*** ****.  .

143. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggcgcggacaccagcgtctacc	Protospacer
***************** ** ** * .

144. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgtcggcggcgcggccggcaccggcgccg	Protospacer
*..*********** *.*********  .

145. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP045412 (Roseovarius sp. THAF8 plasmid pTHAF8_b, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ctgtggcggcgcggaaatcaccggcggcg	Protospacer
*  .*********** * ********* .

146. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cttgagcggcgcggtcagcaccggcaggc	Protospacer
* . .********* **********.**

147. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP045406 (Roseovarius sp. THAF9 plasmid pTHAF9_b, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ctgtggcggcgcggaaatcaccggcggcg	Protospacer
*  .*********** * ********* .

148. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 7, identity: 0.759

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ggccggcggcgcgggcggcaccggcccgg	Protospacer
 .************.*.********  *.

149. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 8, identity: 0.758

cgtgacg-atcgtcggggcgacgaccgcggtggt	CRISPR spacer
-gcgccatctcgtcggggcgatgaccccggtggc	Protospacer
 *.* *.  ************.**** ******.

150. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 8, identity: 0.758

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
agcaacgatcgtcgcgacgacgaccgcgaagga	Protospacer
 *..********** *.***********. **

151. spacer 13.9|7130493|30|NZ_CP045643|CRT matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgagcgtcgtgacggggatcgtccgccg	CRISPR spacer
caacggcgtcgtgacgggtatcgcccgccc	Protospacer
 .  .************* ****.*****

152. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 8, identity: 0.758

cgtgacg-atcgtcggggcgacgaccgcggtggt	CRISPR spacer
-gcgccatctcgtcggggcgatgaccccggtggc	Protospacer
 *.* *.  ************.**** ******.

153. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 8, identity: 0.758

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
agcaacgatcgtcgcgacgacgaccgcgaagga	Protospacer
 *..********** *.***********. **

154. spacer 13.16|7130826|30|NZ_CP045643|CRT matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgagcgtcgtgacggggatcgtccgccg	CRISPR spacer
caacggcgtcgtgacgggtatcgcccgccc	Protospacer
 .  .************* ****.*****

155. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ggccggcggcgcgggcggcaccggcccag	Protospacer
 .************.*.********  ..

156. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP018075 (Streptomyces venezuelae strain NRRL B-65442 plasmid, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
actgggcggcgctggcagcaccggcggtg	Protospacer
  . ******** *.************ .

157. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgagccgggcgcgggcagcaccggcgggg	Protospacer
*.     *******.*************.

158. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggctcggccagcaccgagaccg	Protospacer
********** *** ********. .  .

159. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
atccggcggcgcgggcggcaccggcaatg	Protospacer
  ************.*.********.. .

160. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
caccggcggctcggccagcaccgagaccg	Protospacer
********** *** ********. .  .

161. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
cgagccgggcgcgggcagcaccggcgggg	Protospacer
*.     *******.*************.

162. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
ggccggcggcgcgggcggcaccggcccag	Protospacer
 .************.*.********  ..

163. spacer 16.2|8872024|29|NZ_CP045643|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.724

caccggcggcgcggacagcaccggcggga	CRISPR spacer
tggctgcggcgcagacagcaccggcgccc	Protospacer
.. * *******.*************

164. spacer 4.1|2344442|41|NZ_CP045643|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.78

----acccgcacccccacccgccccaccgccgacgaactcgacgt	CRISPR spacer
aaggacccg----gccgcccggcccaccgccgacgaactcgaccc	Protospacer
    *****     **.**** ********************* .

165. spacer 13.5|7130292|36|NZ_CP045643|CRT matches to MT776806 (Mycobacterium phage MrMiyagi, complete genome) position: , mismatch: 9, identity: 0.75

cgtggcagcagcggcggcagtggcagcagtggcggt	CRISPR spacer
agcaatggcagcggcagcagtggcagcagcggcggc	Protospacer
 *.....********.*************.*****.

166. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to MT118296 (Pseudomonas phage Epa19, complete genome) position: , mismatch: 9, identity: 0.727

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
gctgacgctcgtcggggcgaagaccgttgtata	Protospacer
  ***** ************ *****. **.

167. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to MT108731 (Pseudomonas phage Epa43, complete genome) position: , mismatch: 9, identity: 0.727

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
gctgacgctcgtcggggcgaagaccgttgtata	Protospacer
  ***** ************ *****. **.

168. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to MT108725 (Pseudomonas phage Epa5, complete genome) position: , mismatch: 9, identity: 0.727

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
gctgacgctcgtcggggcgaagaccgttgtata	Protospacer
  ***** ************ *****. **.

169. spacer 13.8|7130442|33|NZ_CP045643|CRT matches to MH992213 (Apis mellifera associated microvirus 15 isolate INH_SP_268, complete genome) position: , mismatch: 9, identity: 0.727

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gtggactgccggcgtgacgatgaccggcaacct	Protospacer
.  **** ***********.******** . *.

170. spacer 13.8|7130442|33|NZ_CP045643|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.727

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
cgcctcgatcggcatgacggtgaccggcctgcc	Protospacer
 .*  *  .****.*************** ***

171. spacer 13.8|7130442|33|NZ_CP045643|CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.727

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gcccacttccggcgtgccggtgcccggcgcgaa	Protospacer
. * ************ ***** *****  *

172. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to MT118296 (Pseudomonas phage Epa19, complete genome) position: , mismatch: 9, identity: 0.727

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
gctgacgctcgtcggggcgaagaccgttgtata	Protospacer
  ***** ************ *****. **.

173. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to MT108731 (Pseudomonas phage Epa43, complete genome) position: , mismatch: 9, identity: 0.727

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
gctgacgctcgtcggggcgaagaccgttgtata	Protospacer
  ***** ************ *****. **.

174. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to MT108725 (Pseudomonas phage Epa5, complete genome) position: , mismatch: 9, identity: 0.727

cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
gctgacgctcgtcggggcgaagaccgttgtata	Protospacer
  ***** ************ *****. **.

175. spacer 13.15|7130775|33|NZ_CP045643|CRT matches to MH992213 (Apis mellifera associated microvirus 15 isolate INH_SP_268, complete genome) position: , mismatch: 9, identity: 0.727

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gtggactgccggcgtgacgatgaccggcaacct	Protospacer
.  **** ***********.******** . *.

176. spacer 13.15|7130775|33|NZ_CP045643|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.727

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
cgcctcgatcggcatgacggtgaccggcctgcc	Protospacer
 .*  *  .****.*************** ***

177. spacer 13.15|7130775|33|NZ_CP045643|CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.727

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gcccacttccggcgtgccggtgcccggcgcgaa	Protospacer
. * ************ ***** *****  *

178. spacer 15.1|8716611|34|NZ_CP045643|CRT matches to NZ_CP023738 (Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence) position: , mismatch: 9, identity: 0.735

ccctcttcgatccggcgaacctgggcgggaaggt	CRISPR spacer
ccgccttcgatacggcgatcctgggcggcgcgca	Protospacer
** .******* ****** ********* . *

179. spacer 13.5|7130292|36|NZ_CP045643|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

cgtggcagcagcggcggcagtggcagcagtggcggt	CRISPR spacer
aggagcagcagcggcagcagcggcagcagttcgagc	Protospacer
 * .***********.****.*********   .*.

180. spacer 13.8|7130442|33|NZ_CP045643|CRT matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 10, identity: 0.697

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gcccacttccggcgtgccggtgcccggcgcaaa	Protospacer
. * ************ ***** *****  .

181. spacer 13.8|7130442|33|NZ_CP045643|CRT matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 10, identity: 0.697

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gcccacttccggcgtgccggtgcccggcgcaaa	Protospacer
. * ************ ***** *****  .

182. spacer 13.15|7130775|33|NZ_CP045643|CRT matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 10, identity: 0.697

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gcccacttccggcgtgccggtgcccggcgcaaa	Protospacer
. * ************ ***** *****  .

183. spacer 13.15|7130775|33|NZ_CP045643|CRT matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 10, identity: 0.697

aacgacttccggcgtgacggtgaccggccggcc	CRISPR spacer
gcccacttccggcgtgccggtgcccggcgcaaa	Protospacer
. * ************ ***** *****  .

184. spacer 13.7|7130391|33|NZ_CP045643|CRT matches to NZ_CP049751 (Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence) position: , mismatch: 18, identity: 0.455

-----cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
ccgaccgcggtggtcgccgcgacgatcggtgcc-----	Protospacer
     **.*..*.***.** *.***. . .**

185. spacer 13.14|7130724|33|NZ_CP045643|CRT matches to NZ_CP049751 (Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence) position: , mismatch: 18, identity: 0.455

-----cgtgacgatcgtcggggcgacgaccgcggtggt	CRISPR spacer
ccgaccgcggtggtcgccgcgacgatcggtgcc-----	Protospacer
     **.*..*.***.** *.***. . .**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

999393 : 1011937

Bacillus_phage(50.0%)

tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153286957.1\|999393_1000974_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	6.4e-68	34.5
WP_153286958.1\|1001067_1001511_+\|tail	phage tail protein	NA	NA	NA	NA
WP_153286959.1\|1001510_1001996_+	hypothetical protein	NA	NA	NA	NA
WP_153286960.1\|1005391_1005772_+	hypothetical protein	NA	NA	NA	NA
WP_153286961.1\|1005815_1006241_+\|tail	phage tail protein	NA	NA	NA	NA
WP_153286962.1\|1006299_1007037_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_153286963.1\|1007036_1008944_+	VgrG-related protein	NA	NA	NA	NA
WP_153286964.1\|1008984_1009425_+\|plate	baseplate protein	A0A1D8KR06	Synechococcus_phage	5.3e-12	31.6
WP_153286965.1\|1009424_1011383_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_153286966.1\|1011379_1011937_+\|tail	phage tail protein	NA	NA	NA	NA

DBSCAN-SWA_2

1135674 : 1209187

Bacillus_phage(20.0%)

transposase,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153287058.1\|1135674_1136651_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	8.4e-10	33.6
WP_153287059.1\|1136935_1138114_+	acyltransferase family protein	NA	NA	NA	NA
WP_153287060.1\|1138371_1140159_-	hypothetical protein	NA	NA	NA	NA
WP_153287061.1\|1140660_1142121_+	MFS transporter	NA	NA	NA	NA
WP_153287062.1\|1142328_1143279_-	hypothetical protein	NA	NA	NA	NA
WP_153287063.1\|1143696_1144434_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_153292722.1\|1144933_1145224_+	hypothetical protein	NA	NA	NA	NA
WP_153287064.1\|1145872_1146259_-	PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_153287065.1\|1146283_1146919_-	hydrolase	S4VRV8	Pandoravirus	1.1e-05	32.4
WP_153287066.1\|1147146_1148493_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_153287067.1\|1148604_1149357_-	thiamine biosynthesis protein ThiJ	NA	NA	NA	NA
WP_153287068.1\|1149621_1151004_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_153287069.1\|1151075_1151264_-	hypothetical protein	NA	NA	NA	NA
WP_153287070.1\|1152359_1153562_+	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_153292723.1\|1153614_1154310_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_153292724.1\|1154715_1155555_-	hypothetical protein	NA	NA	NA	NA
WP_153287071.1\|1156202_1158917_+	PAS domain S-box protein	A0A1V0SL97	Klosneuvirus	5.2e-17	25.8
WP_153287072.1\|1159188_1160103_-	YihY family inner membrane protein	NA	NA	NA	NA
WP_153287073.1\|1160092_1160677_-	hypothetical protein	NA	NA	NA	NA
WP_153287074.1\|1160676_1161723_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_153287075.1\|1161719_1161905_-	hypothetical protein	NA	NA	NA	NA
WP_153287076.1\|1161965_1162481_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_153292725.1\|1162907_1163432_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_153287077.1\|1164291_1164642_+	hypothetical protein	NA	NA	NA	NA
WP_153287078.1\|1164896_1165682_+	UTRA domain-containing protein	NA	NA	NA	NA
WP_153287079.1\|1165726_1167409_-	DUF971 domain-containing protein	NA	NA	NA	NA
WP_153287080.1\|1167712_1168576_+	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA
WP_153292726.1\|1168620_1168857_+	hypothetical protein	NA	NA	NA	NA
WP_153287081.1\|1169373_1169958_+	hypothetical protein	NA	NA	NA	NA
WP_153287082.1\|1170105_1170918_-	SDR family oxidoreductase	A0A0G2Y8L6	Acanthamoeba_polyphaga_mimivirus	8.8e-05	32.4
WP_153287083.1\|1171055_1172027_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_153287084.1\|1172219_1172849_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_153287085.1\|1172848_1173934_-	S-(hydroxymethyl)mycothiol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	1.6e-33	30.0
WP_153287086.1\|1174277_1176032_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.8e-64	30.6
WP_153287087.1\|1176178_1176475_-	hypothetical protein	NA	NA	NA	NA
WP_153287088.1\|1176648_1177014_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_153287089.1\|1177669_1178641_-	hypothetical protein	NA	NA	NA	NA
WP_153287090.1\|1178633_1179197_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_153287091.1\|1179374_1180988_+	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_153287092.1\|1180984_1181335_+	hypothetical protein	NA	NA	NA	NA
WP_153287093.1\|1181388_1182906_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_153287094.1\|1182930_1183779_-	MIP family channel protein	NA	NA	NA	NA
WP_153287095.1\|1183960_1185841_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_153292727.1\|1186156_1188139_-	GTP-binding protein	E4ZFJ7	Streptococcus_phage	4.8e-105	36.2
WP_153287096.1\|1188453_1189626_+	XshC-Cox1 family protein	NA	NA	NA	NA
WP_153287097.1\|1189699_1190227_-	YfcE family phosphodiesterase	NA	NA	NA	NA
WP_153287098.1\|1190312_1192757_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_153287099.1\|1193097_1195269_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_153292728.1\|1195583_1196888_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_153287100.1\|1197097_1197511_+	hotdog fold thioesterase	NA	NA	NA	NA
WP_153287101.1\|1198011_1198227_+	type A2 lantipeptide	NA	NA	NA	NA
WP_153287102.1\|1198318_1199128_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_153287103.1\|1199124_1201347_+\|bacteriocin	NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit	W8CYL7	Bacillus_phage	6.1e-32	25.4
WP_153287104.1\|1201348_1204162_+\|bacteriocin	NHLP bacteriocin export ABC transporter permease/ATPase subunit	F2Y2R6	Organic_Lake_phycodnavirus	2.1e-13	24.9
WP_153287105.1\|1204166_1204703_-	toxin	NA	NA	NA	NA
WP_153287106.1\|1204709_1205063_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_153287107.1\|1205267_1206767_+	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	4.1e-56	35.5
WP_153287108.1\|1206778_1208362_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_153287109.1\|1208740_1209187_-\|protease	protease inhibitor	NA	NA	NA	NA

DBSCAN-SWA_3

1392625 : 1460251

Streptomyces_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153287246.1\|1392625_1393384_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_153292740.1\|1393392_1393785_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153287247.1\|1393768_1394449_-	hypothetical protein	NA	NA	NA	NA
WP_153292741.1\|1394481_1396206_-	hypothetical protein	NA	NA	NA	NA
WP_153287248.1\|1396581_1396794_-	hypothetical protein	NA	NA	NA	NA
WP_153287249.1\|1397882_1398311_+	hypothetical protein	NA	NA	NA	NA
WP_153287250.1\|1398426_1398684_-	hypothetical protein	NA	NA	NA	NA
WP_153287251.1\|1399334_1400348_-	hypothetical protein	NA	NA	NA	NA
WP_153292742.1\|1400344_1400953_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_153287252.1\|1400952_1401261_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153292743.1\|1401490_1401985_+	transcriptional regulator	NA	NA	NA	NA
WP_153287253.1\|1402681_1403569_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_153287254.1\|1403810_1404359_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_153287255.1\|1405295_1405922_-	hypothetical protein	NA	NA	NA	NA
WP_153287256.1\|1406061_1406289_-	hypothetical protein	NA	NA	NA	NA
WP_153287257.1\|1407024_1407333_+	hypothetical protein	NA	NA	NA	NA
WP_153287258.1\|1407665_1408499_+	GlcNAc-PI de-N-acetylase	NA	NA	NA	NA
WP_153287259.1\|1408881_1410336_-	hypothetical protein	NA	NA	NA	NA
WP_153287260.1\|1410536_1411271_+	DUF1345 domain-containing protein	NA	NA	NA	NA
WP_153287261.1\|1411327_1413811_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_153287262.1\|1414443_1415559_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_153287263.1\|1415555_1418279_-	SpoIIE family protein phosphatase	A0A1J0MCT1	Streptomyces_phage	6.2e-10	44.6
WP_153292744.1\|1419343_1420675_+	M1 family peptidase	NA	NA	NA	NA
WP_153287264.1\|1421151_1423050_+	N-acetylmuramoyl-L-alanine amidase	B1ABI9	Lactococcus_phage	4.3e-10	36.8
WP_153287265.1\|1423372_1425466_-	FUSC family protein	NA	NA	NA	NA
WP_153287266.1\|1425767_1426982_+	dipeptidyl aminopeptidase	NA	NA	NA	NA
WP_153292745.1\|1427135_1428203_-	chitinase	NA	NA	NA	NA
WP_153287267.1\|1428587_1429013_-	hypothetical protein	NA	NA	NA	NA
WP_153287268.1\|1430011_1430485_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_153287269.1\|1430770_1431715_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.1e-30	34.8
WP_153287270.1\|1431711_1432560_+	ABC transporter permease	NA	NA	NA	NA
WP_153292746.1\|1432683_1433943_+	sensor histidine kinase	NA	NA	NA	NA
WP_153287271.1\|1433939_1434614_+	response regulator	NA	NA	NA	NA
WP_153287272.1\|1434873_1436064_-	MFS transporter	NA	NA	NA	NA
WP_153287273.1\|1436239_1437073_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153292747.1\|1437395_1438154_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	4.8e-21	34.8
WP_153287274.1\|1438780_1438945_+	hypothetical protein	NA	NA	NA	NA
WP_153287275.1\|1439118_1440453_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_153287276.1\|1440466_1440925_-	hypothetical protein	NA	NA	NA	NA
WP_153287277.1\|1441246_1441816_+	universal stress protein	NA	NA	NA	NA
WP_153287278.1\|1441922_1442870_-	MIP family channel protein	NA	NA	NA	NA
WP_153287279.1\|1443054_1443903_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_153287280.1\|1444348_1444873_+	hypothetical protein	NA	NA	NA	NA
WP_153287281.1\|1445745_1446135_-	hypothetical protein	NA	NA	NA	NA
WP_153287282.1\|1446144_1446432_-	hypothetical protein	NA	NA	NA	NA
WP_153287283.1\|1446759_1448994_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_153287284.1\|1449057_1449507_+	hypothetical protein	NA	NA	NA	NA
WP_153287285.1\|1450081_1450684_-	hypothetical protein	NA	NA	NA	NA
WP_153292748.1\|1450747_1451113_-	hypothetical protein	NA	NA	NA	NA
WP_153287286.1\|1452998_1454209_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.2e-31	34.3
WP_153287287.1\|1454306_1454738_+\|transposase	transposase	NA	NA	NA	NA
WP_153287288.1\|1454662_1455283_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153287289.1\|1455337_1456573_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153287290.1\|1457014_1457419_-	hypothetical protein	NA	NA	NA	NA
WP_153292749.1\|1458244_1458568_+	DUF4240 domain-containing protein	NA	NA	NA	NA
WP_153287291.1\|1458652_1460251_+\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

8713047 : 8731785

Paenibacillus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153292531.1\|8713047_8713880_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153293319.1\|8714030_8715311_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_153292532.1\|8715480_8716456_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	8.4e-10	33.6
WP_153292533.1\|8717938_8718913_+	ATP-dependent DNA ligase	NA	NA	NA	NA
WP_153292534.1\|8718985_8719876_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153292535.1\|8720132_8720786_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_153292536.1\|8721246_8721831_+	hypothetical protein	NA	NA	NA	NA
WP_153292537.1\|8723351_8723681_-	hypothetical protein	NA	NA	NA	NA
WP_153292538.1\|8725687_8726128_+	hypothetical protein	NA	NA	NA	NA
WP_153292539.1\|8727452_8728429_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	8.4e-10	33.6
WP_153292540.1\|8728588_8729710_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153292541.1\|8729735_8730293_-	hypothetical protein	NA	NA	NA	NA
WP_153292542.1\|8730808_8731785_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-09	33.6

DBSCAN-SWA_5

8796329 : 8845824

uncultured_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153292584.1\|8796329_8796764_+\|transposase	transposase	NA	NA	NA	NA
WP_153292585.1\|8796760_8797507_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_153292586.1\|8798383_8799280_+	RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_153292587.1\|8800836_8803524_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_153292588.1\|8803791_8804031_+\|transposase	transposase	NA	NA	NA	NA
WP_153293331.1\|8804093_8804351_-	hypothetical protein	NA	NA	NA	NA
WP_153292589.1\|8804462_8804639_-	hypothetical protein	NA	NA	NA	NA
WP_153292590.1\|8804644_8805220_-	hypothetical protein	NA	NA	NA	NA
WP_153292591.1\|8806738_8806930_+	hypothetical protein	NA	NA	NA	NA
WP_153292592.1\|8807813_8809049_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_153293319.1\|8810054_8811335_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_153292593.1\|8811526_8811820_+	hypothetical protein	NA	NA	NA	NA
WP_153292594.1\|8811885_8812026_+	hypothetical protein	NA	NA	NA	NA
WP_153292595.1\|8812125_8813232_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_153292596.1\|8813347_8813692_+	hypothetical protein	NA	NA	NA	NA
WP_153292597.1\|8814465_8815146_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_019075709.1\|8815395_8815755_-	hypothetical protein	NA	NA	NA	NA
WP_153292598.1\|8816682_8817402_+	hypothetical protein	NA	NA	NA	NA
WP_153292599.1\|8817519_8817912_-	alkylmercury lyase	NA	NA	NA	NA
WP_153292600.1\|8819037_8819493_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_153292601.1\|8819564_8820935_-	SidA/IucD/PvdA family monooxygenase	NA	NA	NA	NA
WP_153292602.1\|8821179_8821545_+	metalloregulator ArsR/SmtB family transcription factor	A0A218MNF3	uncultured_virus	3.1e-10	48.5
WP_153293332.1\|8821475_8821892_+	hypothetical protein	NA	NA	NA	NA
WP_153292603.1\|8821911_8822973_-	SidA/IucD/PvdA family monooxygenase	A0A2H4J2Q2	uncultured_Caudovirales_phage	2.4e-71	49.8
WP_153292604.1\|8823010_8824120_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_153292605.1\|8824116_8824425_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_153292606.1\|8824644_8825064_+	phosphotyrosine protein phosphatase	A0A2H4PQT9	Staphylococcus_phage	2.6e-16	42.7
WP_153292607.1\|8825675_8825885_+	hypothetical protein	NA	NA	NA	NA
WP_153293319.1\|8825978_8827259_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_153293333.1\|8827364_8827682_-	hypothetical protein	NA	NA	NA	NA
WP_153292608.1\|8828007_8828682_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_153292609.1\|8828966_8829398_-	protein phosphatase	NA	NA	NA	NA
WP_153293334.1\|8830079_8830583_+	ferredoxin	NA	NA	NA	NA
WP_153292610.1\|8831337_8831784_+	hypothetical protein	NA	NA	NA	NA
WP_153292611.1\|8832176_8832722_+	hypothetical protein	NA	NA	NA	NA
WP_153292612.1\|8833980_8834721_+	hypothetical protein	NA	NA	NA	NA
WP_153292613.1\|8834666_8835176_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_153292614.1\|8835576_8836533_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_153292615.1\|8836544_8836850_+	hypothetical protein	NA	NA	NA	NA
WP_153292616.1\|8838548_8843015_+	hypothetical protein	NA	NA	NA	NA
WP_153292617.1\|8843532_8844591_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153292618.1\|8844741_8845824_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	3.5e-25	32.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045643

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection