CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045646	Bifidobacterium breve strain JSRL01 chromosome, complete genome	4 crisprs	cas3,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	0	19	0	0

1. NZ_CP045646

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045646_1

• CRISPR_ID: NZ_CP045646_1
• CRISPR_location: 1646212-1647191
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 14 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5

Consensus repeat of NZ_CP045646_1

Consensus_repeat	Method
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CRISPRCasFinder
ATTTCAATCCACGCTCCCCGGATGGGGA	CRT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	PILER-CR

spacers of NZ_CP045646_1

>1.1|1646245|36|NZ_CP045646|CRISPRCasFinder
GCTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTG
>1.2|1646314|35|NZ_CP045646|CRISPRCasFinder
CAGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAG
>1.3|1646382|35|NZ_CP045646|CRISPRCasFinder
TGTCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCA
>1.4|1646450|36|NZ_CP045646|CRISPRCasFinder
GTCGAAACATGTGTTTTCGCGCAACCTGAGATTTAC
>1.5|1646519|34|NZ_CP045646|CRISPRCasFinder
CGGTTCGGACGGCGCCATCGACCAGTGGGTGGAC
>1.6|1646586|34|NZ_CP045646|CRISPRCasFinder
GTCCGATGCCTGCTGACAAGGACAGGAAAGCACT
>1.7|1646653|36|NZ_CP045646|CRISPRCasFinder
TAGTAGATTTCCGCACCGTTGGCCTGCGACTCGAAA
>1.8|1646722|35|NZ_CP045646|CRISPRCasFinder
AACGGGATGGGAGCCGTGTTCAACTGGCTGTACCT
>1.9|1646790|34|NZ_CP045646|CRISPRCasFinder
ATCCGGGTGTGATTTTGAAGACCCTGCTTGACGA
>1.10|1646857|33|NZ_CP045646|CRISPRCasFinder
ATACACGTCGCCTTTGCCGTACATTGACGCGTA
>1.11|1646923|35|NZ_CP045646|CRISPRCasFinder
ACGGCCTGCCATGCGGTGAGGTTGCGTCCCGGTTT
>1.12|1646991|33|NZ_CP045646|CRISPRCasFinder
CTTGTCGAAGTTGGGGATGCGTCCCACGTTGGC
>1.13|1647057|34|NZ_CP045646|CRISPRCasFinder
ATGTTCAGGGCGGCGTTCATGTCCCGGTCGTGCA
>1.14|1647124|35|NZ_CP045646|CRISPRCasFinder
TCGGGTTTCGGGTTCGTCTCCCTGTCGTACGCGTT
>1.15|1646240|41|NZ_CP045646|CRT
GCGACGCTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTG
>1.16|1646309|40|NZ_CP045646|CRT
GCGACCAGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAG
>1.17|1646377|40|NZ_CP045646|CRT
GCGACTGTCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCA
>1.18|1646445|41|NZ_CP045646|CRT
TCGACGTCGAAACATGTGTTTTCGCGCAACCTGAGATTTAC
>1.19|1646514|39|NZ_CP045646|CRT
TCGACCGGTTCGGACGGCGCCATCGACCAGTGGGTGGAC
>1.20|1646581|39|NZ_CP045646|CRT
GCGACGTCCGATGCCTGCTGACAAGGACAGGAAAGCACT
>1.21|1646648|40|NZ_CP045646|CRT
GCGACTAGTAGATTTCCGCACCGTTGGCCTGCGACTCGAA
>1.22|1646716|41|NZ_CP045646|CRT
AGCGACAACGGGATGGGAGCCGTGTTCAACTGGCTGTACCT
>1.23|1646785|39|NZ_CP045646|CRT
GCGACATCCGGGTGTGATTTTGAAGACCCTGCTTGACGA
>1.24|1646852|38|NZ_CP045646|CRT
GCGACATACACGTCGCCTTTGCCGTACATTGACGCGTA
>1.25|1646918|40|NZ_CP045646|CRT
GCGACACGGCCTGCCATGCGGTGAGGTTGCGTCCCGGTTT
>1.26|1646986|38|NZ_CP045646|CRT
GCGACCTTGTCGAAGTTGGGGATGCGTCCCACGTTGGC
>1.27|1647052|39|NZ_CP045646|CRT
GCGACATGTTCAGGGCGGCGTTCATGTCCCGGTCGTGCA
>1.28|1647119|40|NZ_CP045646|CRT
GCGACTCGGGTTTCGGGTTCGTCTCCCTGTCGTACGCGTT
>1.29|1646315|35|NZ_CP045646|PILER-CR
CAGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAG
>1.30|1646384|35|NZ_CP045646|PILER-CR
TGTCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCA
>1.31|1646453|36|NZ_CP045646|PILER-CR
GTCGAAACATGTGTTTTCGCGCAACCTGAGATTTAC
>1.32|1646523|34|NZ_CP045646|PILER-CR
CGGTTCGGACGGCGCCATCGACCAGTGGGTGGAC
>1.33|1646591|34|NZ_CP045646|PILER-CR
GTCCGATGCCTGCTGACAAGGACAGGAAAGCACT
>1.34|1646659|35|NZ_CP045646|PILER-CR
TAGTAGATTTCCGCACCGTTGGCCTGCGACTCGAA
>1.35|1646728|35|NZ_CP045646|PILER-CR
AACGGGATGGGAGCCGTGTTCAACTGGCTGTACCT
>1.36|1646797|34|NZ_CP045646|PILER-CR
ATCCGGGTGTGATTTTGAAGACCCTGCTTGACGA
>1.37|1646865|33|NZ_CP045646|PILER-CR
ATACACGTCGCCTTTGCCGTACATTGACGCGTA
>1.38|1646932|35|NZ_CP045646|PILER-CR
ACGGCCTGCCATGCGGTGAGGTTGCGTCCCGGTTT
>1.39|1647001|33|NZ_CP045646|PILER-CR
CTTGTCGAAGTTGGGGATGCGTCCCACGTTGGC
>1.40|1647068|34|NZ_CP045646|PILER-CR
ATGTTCAGGGCGGCGTTCATGTCCCGGTCGTGCA
>1.41|1647136|35|NZ_CP045646|PILER-CR
TCGGGTTTCGGGTTCGTCTCCCTGTCGTACGCGTT

CRISPR arrays and Neighbor proteins around NZ_CP045646_1

CRISPR arrays

The CRISPR arrays of NZ_CP045646_1

>merge|NZ_CP045646|1|1646212-1647191|CRISPRCasFinder,CRT,PILER-CR
ATAGGAACCCACGCTCCCCAGATGGGGAGCGACGCTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCAGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAGATTTCAATCCACGCTCCCCGAATGGGGAGCGACTGTCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCAATTTCAATCCACGCTCCCCGGATGGGGATCGACGTCGAAACATGTGTTTTCGCGCAACCTGAGATTTACATTTCAATCCACGCTCCCCGGATGGGGATCGACCGGTTCGGACGGCGCCATCGACCAGTGGGTGGACATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTCCGATGCCTGCTGACAAGGACAGGAAAGCACTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTAGTAGATTTCCGCACCGTTGGCCTGCGACTCGAAATTTCAATCCACGCCCCCCCGGATGGGGAGCGACAACGGGATGGGAGCCGTGTTCAACTGGCTGTACCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACATCCGGGTGTGATTTTGAAGACCCTGCTTGACGAATTTCAATCCACGTTCCCCGGATGGGGAGCGACATACACGTCGCCTTTGCCGTACATTGACGCGTAATTTCAATCCACGCTCCCCGGATGGGGAGCGACACGGCCTGCCATGCGGTGAGGTTGCGTCCCGGTTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTTGTCGAAGTTGGGGATGCGTCCCACGTTGGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACATGTTCAGGGCGGCGTTCATGTCCCGGTCGTGCAATTTCAATCCACGCTCCCCGGATGGGGAGCGACTCGGGTTTCGGGTTCGTCTCCCTGTCGTACGCGTTATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP045646|1|1|1646212-1647191|CRISPRCasFinder
ATAGGAACCCACGCTCCCCAGATGGGGAGCGAC	GCTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAG
ATTTCAATCCACGCTCCCCGAATGGGGAGCGAC	TGTCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCA
ATTTCAATCCACGCTCCCCGGATGGGGATCGAC	GTCGAAACATGTGTTTTCGCGCAACCTGAGATTTAC
ATTTCAATCCACGCTCCCCGGATGGGGATCGAC	CGGTTCGGACGGCGCCATCGACCAGTGGGTGGAC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCCGATGCCTGCTGACAAGGACAGGAAAGCACT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TAGTAGATTTCCGCACCGTTGGCCTGCGACTCGAAA
TTTCAATCCACGCCCCCCCGGATGGGGAGCGAC	AACGGGATGGGAGCCGTGTTCAACTGGCTGTACCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATCCGGGTGTGATTTTGAAGACCCTGCTTGACGA
ATTTCAATCCACGTTCCCCGGATGGGGAGCGAC	ATACACGTCGCCTTTGCCGTACATTGACGCGTA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACGGCCTGCCATGCGGTGAGGTTGCGTCCCGGTTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTTGTCGAAGTTGGGGATGCGTCCCACGTTGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGTTCAGGGCGGCGTTCATGTCCCGGTCGTGCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGGGTTTCGGGTTCGTCTCCCTGTCGTACGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP045646|1|1|1646212-1647186|CRT
ATAGGAACCCACGCTCCCCAGATGGGGA	GCGACGCTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTG
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACCAGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAG
ATTTCAATCCACGCTCCCCGAATGGGGA	GCGACTGTCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCA
ATTTCAATCCACGCTCCCCGGATGGGGA	TCGACGTCGAAACATGTGTTTTCGCGCAACCTGAGATTTAC
ATTTCAATCCACGCTCCCCGGATGGGGA	TCGACCGGTTCGGACGGCGCCATCGACCAGTGGGTGGAC
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACGTCCGATGCCTGCTGACAAGGACAGGAAAGCACT
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACTAGTAGATTTCCGCACCGTTGGCCTGCGACTCGAA
ATTTCAATCCACGCCCCCCCGGATGGGG	AGCGACAACGGGATGGGAGCCGTGTTCAACTGGCTGTACCT
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACATCCGGGTGTGATTTTGAAGACCCTGCTTGACGA
ATTTCAATCCACGTTCCCCGGATGGGGA	GCGACATACACGTCGCCTTTGCCGTACATTGACGCGTA
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACACGGCCTGCCATGCGGTGAGGTTGCGTCCCGGTTT
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACCTTGTCGAAGTTGGGGATGCGTCCCACGTTGGC
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACATGTTCAGGGCGGCGTTCATGTCCCGGTCGTGCA
ATTTCAATCCACGCTCCCCGGATGGGGA	GCGACTCGGGTTTCGGGTTCGTCTCCCTGTCGTACGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGA

>NZ_CP045646|1|1|1646281-1647191|PILER-CR
ATTTCAATCCACGCTCCCCGGATGGGGAGCGACC	AGCCCTCGCTGCCGGTCTGAGCCTTGCCGTACAGA
TTTCAATCCACGCTCCCCGAATGGGGAGCGACTG	TCCCGCTCCTTAGTACCAGTTGTGGGCGAGCCAAT
TTCAATCCACGCTCCCCGGATGGGGATCGACGTC	GAAACATGTGTTTTCGCGCAACCTGAGATTTACATT
TCAATCCACGCTCCCCGGATGGGGATCGACCGGT	TCGGACGGCGCCATCGACCAGTGGGTGGACATTT
CAATCCACGCTCCCCGGATGGGGAGCGACGTCCG	ATGCCTGCTGACAAGGACAGGAAAGCACTATTTC
AATCCACGCTCCCCGGATGGGGAGCGACTAGTAG	ATTTCCGCACCGTTGGCCTGCGACTCGAAATTTCA
ATCCACGCCCCCCCGGATGGGGAGCGACAACGGG	ATGGGAGCCGTGTTCAACTGGCTGTACCTATTTCA
ATCCACGCTCCCCGGATGGGGAGCGACATCCGGG	TGTGATTTTGAAGACCCTGCTTGACGAATTTCAA
TCCACGTTCCCCGGATGGGGAGCGACATACACGT	CGCCTTTGCCGTACATTGACGCGTAATTTCAAT
CCACGCTCCCCGGATGGGGAGCGACACGGCCTGC	CATGCGGTGAGGTTGCGTCCCGGTTTATTTCAATC
CACGCTCCCCGGATGGGGAGCGACCTTGTCGAAG	TTGGGGATGCGTCCCACGTTGGCATTTCAATCC
ACGCTCCCCGGATGGGGAGCGACATGTTCAGGGC	GGCGTTCATGTCCCGGTCGTGCAATTTCAATCCA
CGCTCCCCGGATGGGGAGCGACTCGGGTTTCGGG	TTCGTCTCCCTGTCGTACGCGTTATTTCAATCCAC
GCTCCCCGGATGGGGAGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045646.1|WP_095256858.1|1635851_1636604_+|phosphoserine-phosphatase-SerB	unknown	unknown	gnl|CDD|319803
NZ_CP045646.1|WP_021649100.1|1640048_1641062_+|methionyl-tRNA-formyltransferase	unknown	unknown	gnl|CDD|234567
NZ_CP045646.1|WP_003830251.1|1643385_1643670_+|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl|CDD|234744
NZ_CP045646.1|WP_014484096.1|1655203_1655437_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040
NZ_CP045646.1|WP_131068280.1|1664633_1665176_-|hypothetical-protein	unknown	unknown	gnl|CDD|379250
NZ_CP045646.1|WP_074525147.1|1641356_1643219_-|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|237104
NZ_CP045646.1|WP_014483515.1|1643955_1645176_+|methionine-adenosyltransferase	unknown	unknown	gnl|CDD|235374
NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl|CDD|187820
NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP045646.1|WP_025341852.1|1648800_1649562_+|ATP-binding-protein	unknown	unknown	gnl|CDD|366760
NZ_CP045646.1|WP_014483522.1|1633507_1635082_-|proteasome-ATPase	unknown	unknown	gnl|CDD|200312
NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187782
NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP045646.1|WP_003830263.1|1635135_1635831_-|DedA-family-protein	unknown	unknown	gnl|CDD|223659
NZ_CP045646.1|WP_025341850.1|1636651_1638961_+|primosomal-protein-N'	unknown	unknown	gnl|CDD|237844
NZ_CP045646.1|WP_080685065.1|1647346_1648804_+|IS21-family-transposase	unknown	unknown	gnl|CDD|226950
NZ_CP045646.1|WP_014483523.1|1632734_1633448_+|HAD-family-phosphatase	unknown	unknown	gnl|CDD|319790
NZ_CP045646.1|WP_021649099.1|1639205_1639910_+|HAD-family-phosphatase	unknown	unknown	gnl|CDD|319790
NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|378245

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	6.8e-59	193.8	0.0
NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	1.4e-32	107.8	0.0
NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.6e-27	88.6	0.2
NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	4.1e-95	312.9	0.8
NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	6.8e-138	454.1	0.0
NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	cas8c	pfam09709_cas8c_CAS-I-C	7e-98	323.2	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP045646.1|WP_095256858.1|1635851_1636604_+|phosphoserine-phosphatase-SerB	gnl|CDD|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.9082e-100
NZ_CP045646.1|WP_021649100.1|1640048_1641062_+|methionyl-tRNA-formyltransferase	gnl|CDD|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	2.33225e-126
NZ_CP045646.1|WP_003830251.1|1643385_1643670_+|DNA-directed-RNA-polymerase-subunit-omega	gnl|CDD|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.88678e-17
NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.07596e-31
NZ_CP045646.1|WP_131068280.1|1664633_1665176_-|hypothetical-protein	gnl|CDD|379250	pfam13542, HTH_Tnp_ISL3, Helix-turn-helix domain of transposase family ISL3.	8.25072e-05
NZ_CP045646.1|WP_074525147.1|1641356_1643219_-|dihydroxy-acid-dehydratase	gnl|CDD|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP045646.1|WP_014483515.1|1643955_1645176_+|methionine-adenosyltransferase	gnl|CDD|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	2.89068e-107
NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	3.77456e-177
NZ_CP045646.1|WP_025341852.1|1648800_1649562_+|ATP-binding-protein	gnl|CDD|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.5351e-54
NZ_CP045646.1|WP_014483522.1|1633507_1635082_-|proteasome-ATPase	gnl|CDD|200312	TIGR03689, pup_AAA, proteasome ATPase. In the Actinobacteria, as shown for Mycobacterium tuberculosis, some proteins are modified by ligation between an epsilon-amino group of a lysine side chain and the C-terminal carboxylate of the ubiquitin-like protein Pup. This modification leads to protein degradation by the archaeal-like proteasome found in the Actinobacteria. Members of this protein family belong to the AAA family of ATPases and tend to be clustered with the genes for Pup, the Pup ligase PafA, and structural components of the proteasome. This protein forms hexameric rings with ATPase activity. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.78462e-83
NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.39737e-29
NZ_CP045646.1|WP_003830263.1|1635135_1635831_-|DedA-family-protein	gnl|CDD|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	8.02095e-44
NZ_CP045646.1|WP_025341850.1|1636651_1638961_+|primosomal-protein-N'	gnl|CDD|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP045646.1|WP_080685065.1|1647346_1648804_+|IS21-family-transposase	gnl|CDD|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.9506e-19
NZ_CP045646.1|WP_014483523.1|1632734_1633448_+|HAD-family-phosphatase	gnl|CDD|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.86359e-35
NZ_CP045646.1|WP_021649099.1|1639205_1639910_+|HAD-family-phosphatase	gnl|CDD|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.4378e-46
NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	gnl|CDD|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	7.20591e-90

Protein sequences

>NZ_CP045646.1|WP_014483515.1|1643955_1645176_+|methionine-adenosyltransferase
MTEEHRLISAESVTEGHPDKVCDQISDAILDDLLAQDPSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGAQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDNDQPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHKVEIQVAYAIGVADPVSINVETFGTEQGVTRGQIAAAVRKVFDLRPAAIIDELDLKRPIYLKTAAYGHFGRMDVEFPWEKTDKVEELKAAIAGE
>NZ_CP045646.1|WP_003830251.1|1643385_1643670_+|DNA-directed-RNA-polymerase-subunit-omega
MAFGTDPTPDGLANPPIDDLMQHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLVEYQNNEKPLSIAFREIDEGLLEETLGEDDTNEGN
>NZ_CP045646.1|WP_074525147.1|1641356_1643219_-|dihydroxy-acid-dehydratase
MTEMRSAKIMSGRVFAGARALYRAAGVSGDDMGKKPIIAIANSFDEFLPGHVHLNKVGRIVSEAIREAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCADALICIPNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLADGTVKSTDLIDVMYATADDSVSDEELLNYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAQQVVKIAHQYYDDSDDSVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDIERISHTVPCICKASPSGKWEISDVHRAGGITGILGELERAGKLHTNVHSIDYPTLEAKLADWDIMRPTCTEEAKQMYKAAPGHIISPEPWTHTTLFDSLDRDRVNGAIHDIDHPEIHEGGLAVLRGNLAPDGCVVKTAGVPPEIWKFRGPALVVDSQEQAIEVILNDTLKPGMALVIRYEGPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPVALIKNGDIIDIDIEARSVNVELTDEQLDERRRELEAGDGYVAHRDRHVSQALKAYAAFARSADKGATRDPELINKLSGLA
>NZ_CP045646.1|WP_021649100.1|1640048_1641062_+|methionyl-tRNA-formyltransferase
MLKLVFAGTPDVAVPSLQAFAADSRFEVVGVITRPDAPTGRGRKLTPSPVKAAAVELGLTVIDAKPRSPEFMEALNGLHADIAAVIAYGNILPKSVLDAVPMGWYNLHFSNLPKWRGAAPAQRAIWNGDPTTGADVFKVGEGLDDGPIIASLTVELTGRETSGELLTRLAEEGAPMYVDALAAVGDGTAIFTPQPAEGLEYAHKITVEDARINWADPAETIDRQIRACTPHPGAWTELFAEGLIADSGEANEESADLTTAVKPLTLHILAAQPADQTNPNTPIDLDPGELKVGKKNVWAGTGTGTLELTQVKAQGKKAMRAADWARGAHLSPTACVK
>NZ_CP045646.1|WP_021649099.1|1639205_1639910_+|HAD-family-phosphatase
MKGWPGEPDMDYNVLVADGEAATNAGKPITDVIFDFGNVLIYWDPAAVLIPRYSQKTIDAFLDNDISGFYDVNDLMDGGTSTEEAIAIMRERKGDKWADILDYYIKNFRDSLTGIVPGARVLVDDLKAAGIGVWGLSNWEASLFHVAEEQCDILQKLDGKLVSGFVKLRKPHKEIYDAALKEFGIKADGALFIDDKAMNIVGSNDAGIRGVRFQNPVKLRELLIANGVNIPDVQ
>NZ_CP045646.1|WP_025341850.1|1636651_1638961_+|primosomal-protein-N'
MTTSDAQQLTLDGLAPRKRRKRAPAEHTPAEHDPIAQVVLDVQALHLGQTFDYFIDEKDSDAAQPGVLVRVRFGGQRVGGVIWSRTSTSDTPRSSIRYIERVLSPDALVPASMREDIGLIANAYGGTRANILRFAVPPRVAKVEAEQRLTASFRRPVGGSLPDNVQGGFAGRGTLPDGTHPSGSSFEVADSVSEGAAQAYRRIAANYGEANVLNDALHGQRFQSFVFDSLPGAQEWQRNMAWMVATSLSAGKSAVVELPTMREVEDLLPVLRNYGLKPFSPTPSGGWIGDVAVLNAQMPAADRYRAYLAVALGQVKVIIGTRAVMYAPVEGPALFAILEDAAYQNMDGMMPYPQARGVMRLRAKSHGGVFVAMANARTVQSQWENTGPGTVETPVSGYSTAIHPLASPLKDATPWVRWLNRDELARLADATIGARVPHTAVRALSKALESGPVLLSIPQDSTSEALSCAKCHRQARCAKCSGPLQLPADRSESAPRCQWCGAASIHWTCPGCGHERMRVVRVGAAGTAAELAGLFRSVPMVLSSKAQGLVRDVPCKPMIVIATPGFEPRVRPVSNERGAAGHEYRAVAILDAWTSLYALGVDARLDTLTAWMRAVSLCAPRSRGGQALILGETDPAIAQSLMMWDSRILASKDLDERMETGMPPTVAAACVWGRRDAVMTLMQRIGALGGDWAVCGELPGMLGPVPIAQPDTVDARELEATADRVKAVVRVPQSQRAELAIRLHRETARHVASREPGELRFRIDPKDLI
>NZ_CP045646.1|WP_095256858.1|1635851_1636604_+|phosphoserine-phosphatase-SerB
MSQGFSRIESMTQEDVHFIDKSAESEVGALGGSADSVPTLAEPGLLVMDVDSTLIDEEVIDELGEAAGSGEEIAKVTERAMRGELEFCDALRARVALLEGLPVSVFDTVHDKLHFTKGALELIDTLHAHGWKVGVVSGGFHEVVDKLAAEGHIDYWIANRLEVADGRLTGKVLGEIVCKTVKLHALREWAKQLDIPMSQTVAVGDGANDIPMIQAASLGIAFCAKPKTQLAADEAINDRDLMHVLDYLRR
>NZ_CP045646.1|WP_003830263.1|1635135_1635831_-|DedA-family-protein
MELATALAANPTPICTTSEGGLIGTITEWLITLMETIGGVGVALAIALESVFPPIPSEVILPLAGFTAARGTLSLPGAIIWATIGSLLGAWTLYGISRWVGLHRINRAADKIPGVSRKDVSKANDWFTRYGTWSVLIGRVIPVVRSLISIPAGFNRMNFLQFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIVAVVVVIVWFAVKKVRTVVRNRKAQHGE
>NZ_CP045646.1|WP_014483522.1|1633507_1635082_-|proteasome-ATPase
MGEAENLAELNDRLMAKNHALAEALNRAGKELTKAKSQLAQLAQPPLTFATMVKIDSTHTDEDGVQHASAEVISGTRRMIVPVAANVNASRLAAGSTVVLNEKLVLVEQRDADTVGQIRVVKQILDDGRLIVVDASGNPVLVRRSSALSLTAISQGDRIIVDPSVRLAIELLPNEGDRDLVLEETPDVTFADIGGLDSEIGRIRDAVQLPFQHRALFERYDLKPPKGVLLYGPPGNGKTMIAKAVANALCEGGCDMDGDGSINGREQQVKGVFLSVKGPELLNKYVGESERLIRLIFQRARERAAEGKLVVVFIDEMDSLLRTRGSGVSSDVETTIVPQFLSELDGVESLDNVMVIGASNRVDMIDPAVLRPGRLDVKIRIDRPSGEAAASIVRHYLTDDLPLEQGLDADALSRVLVRDIYTRSERRHLADVRDERGTWNALFLADVVSGASLKNIVDRAKTHAVKASIASGKDVALDATLLGRAVEDEFAETRDSLLDADPVQWARVNGFDAGRVTAIRAVGR
>NZ_CP045646.1|WP_014483523.1|1632734_1633448_+|HAD-family-phosphatase
MKGWPGESELNIPFNEVIAYDAAAAHARQPIANVIFDFGNVLVDWDPQALFMPRYSEKRIEDFLDNDISGFYDACDRMDAGASPAEGIAWIRETHGERWAEMLAYYFDNFLDSLTGTIPGMRVLVHDIKAAGLGVWGLSNWQRETIGEAENAYEILRMLNGRVISSEVHMRKPDTAIYMKALESFGIDAATTVFVDDRASNVIGANRAGIRCIRFRDERGLRETLIDAGVPIPAVAE
>NZ_CP045646.1|WP_080685065.1|1647346_1648804_+|IS21-family-transposase
MPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDGLSARPPVRRRRGSVIDEWLPMIEGMLAEDRETWRKQRHTATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAGFLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSNIGPSRLMPGENAECTCQALRNLFEWLGGVPERIVYDNAAGVGRKRFDRIRLTRLFQAFQAHYGFEYTFRNPYSGHEKGGVEARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLGLGDKDHYRKGESQTGLFDEDRKALLPLPAKPFDVVTWTRMKADKYGNITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRVITHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAMPDPLREWIDAQDEATRRDSLRALLHADGESGWRAAVAGMLEILESTGGTDRAGVCLAAARHASGLGPVAYDDPVDLSEYDIAYTKEDE
>NZ_CP045646.1|WP_025341852.1|1648800_1649562_+|ATP-binding-protein
MNQKNGRTGPGPLRERARSLFISQATIDETLEWATPRQLDAIDRMLATELANREASKRARLMRQARFPVTKSLDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGRGKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGALDSLLRDLARADLIILDEFGYVPFDIDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLIEFTGPSRRVSQALMFGKTDNQ
>NZ_CP045646.1|WP_014484096.1|1655203_1655437_-|hypothetical-protein
MTMVESLPTYSSAEAEARSKGDNLISMINVYLAGYAAAGMPVDVETTGKTLHALPADTVLRTDADFDAFEHEVLGDD
>NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2
MMVVVAYDVNTETPDGKRRLRSVAKTCMKYGQRVQNSVFECSVTPSDYLILKHDLAEIMDEMCDSLRYYNLGSKYASKIEHRGRQRHVPVDGVMML
>NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQLLNTLYVTSEDVYLSLKNDNVIVQQGDNTLGRIPLRSLESIISFSYKGASPALMGKCSELGVGLSFFSPRGWYYCSILGEKNRNVLLRREQFRFADDESEALPFARSFIIGKIYNCRWVLERTKRDHALRVNSERIAAQSEKLRQSLANVRNCTSIDELRGVEGLAAKDYFFTFDNLILRDKDDFFFQQRSRRPPLDRANALLSFVYSLLTSDCIAALQGVGLDPYVGFLHTDRPGRASLALDLVEEFRPAIADRFVLTLINTGVIKPSQFEVRENGGVFLSEGGRKTVLAAWQKRKQETITHPFFGEKIPWGLVPHVQALLLNRAIRGDLDAYPPFMWK
>NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4
MKEPTDYPEDDWLALSGLQHFAFCRRQWALIHIEQQWQDNYLTTAGSLEHDRAHDYSESETRGNLLIMRDLRVFSRRLGITGACDVVEFRQSDEGVPLHGRAGTWLPYPVEYKHGVPKQVDADRLQLCAEAMCLEEMLACSIPEGSLFYQQTKRRERVQFDESLRGQIVAMTSEMHDLFSRGHTPKVRPSKACRACSLSDICLPKIAKTRSAHQFIEESVQAGVEGVAG
>NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTSLQHKIDFVLTFAVENANPNGDPLNGNRPRTTAEGLGEMSDVAEKRKIRNRLQDAGERIFVQSTDRTDDGEKSLSDRWKAFTKTLSKEDQKDREALSYRACEQWIDVRSFGQVFAFKGKEKEGDASVSIPVRGPFTIQSAFSLEPIAIDDVQITKSVNGETTDTNKKSSDTMGMKHRVSGRAVYVTHGSISPQLAEKTGFTEKDAEKIKEALLTLFENDESSARPAGSMEVVNLAWFTHNSKAGQYSSAKVHRTAKVDEEGVITVDTTHIPGLHYEVLEGR
>NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG
MSLWSSLLQTYDAVNSSAGITPLNEDVNKTLLPLYHTTLKTQLQVTLDENGYPTIKRDNADIEIIAPCTEQSMGRSGTVLPPHPLFDQLQYIDTNYDPVKHESYLSQLASWKGDNAKLNAIYQYLSQHSIIEEARAQGIGIDPKKDSKIGVRFAVHVRHGDYEPNVWADHAIRDLWIAHEEQVRHGASLGTDLFGETLYKPSTNFPKKIVNVNGNAKLISANDNTNFTFRGRFANRDEALSIDTLTSQKIHTTLRWLAANNGTLTGSQDIVIWAIDGHPTDNVFDPTGNSRDVAEQVDDRTDSEKLIDANVQTYANYAKQFGKLLRGYGNEKVLQQMQQHSRRIVVTIFDAATSGRLSVTFYRELSQNEYIESVLQWHEDAAWYLTCFDNKNSASTDDEAPRGSKKSSDKLKPIPYIGAPSFADIINCVYSTDDHSSDSYRRFAKYVKKQLVECMFSNAGLPASLLQPAFHKVIRPLSYDSLSVWQHDFEVACSMWKKYYIDQDKRLPLNERNNITMDLDEKRTDRDYLFGQLLALADNYEYRVLLRQSGGRTPDRTTNAVKLMNNFVAKPSTTWLTLRQQLNPYIISSTNGMFFQNEVDEVMSKFKEGDFESNKPLSSLFLLGYSHKRRQLIQRADAAKQLKEQNIENKGE
>NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5
MEKHRNSIEYVIYGDYALFSEVATRTGGEKNSYQIPTYQALKGITESIYWKPTIVWVIDAVRVMNKIQTEGKGIRPIKMSGGNDLSYYTYLKKVKYQVLAHFEWNEQREDLRVDRNENKHHNIAKRSVNLGGRRDIFLGTRECQGYVEPCEFGSGEGFYDGYGDWQFGFEFHSFIYPDENPEHDFIAQFWRPIMHDGIIQFERPDSTQLDQRIIRRNQHVKDFIEGRNFSMAEE
>NZ_CP045646.1|WP_131068280.1|1664633_1665176_-|hypothetical-protein
MRQMWGAWPAVRPAGRAPLAASRHRLRQAPAGARAPEGRLRGARGDRRDGAVARRKSAYTRDFERQVAWLSVHAPRSAVSALMRVDWKSVGPICRRVPLGHRGVLEARREDRPPPLRHPAHHPVRTIQRSPGGRQQQDQDHHQDRLRLQEPRQPHRPGHAQMRRPQPPTPRTPITRKPDQ

Crispr_ID: NZ_CP045646_2

• CRISPR_ID: NZ_CP045646_2
• CRISPR_location: 1651375-1654379
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 44 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5

Consensus repeat of NZ_CP045646_2

Consensus_repeat	Method
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CRT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CRISPRCasFinder
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	PILER-CR

spacers of NZ_CP045646_2

>2.1|1651408|35|NZ_CP045646|CRT
TCGCCAGACCGAAATCCACGCTCAGGCACTCCAAA
>2.2|1651476|36|NZ_CP045646|CRT,CRISPRCasFinder
GACCTCGCGGACCTCATCCTCGACACCATCAGCAGG
>2.3|1651545|33|NZ_CP045646|CRT,CRISPRCasFinder
GGTGGCGGGAAACATCATCGGTCGTGGACAAAT
>2.4|1651611|35|NZ_CP045646|CRT,CRISPRCasFinder
TGCGCCATATCCCCTTTGATCTGCCCGTCAAGGCG
>2.5|1651679|35|NZ_CP045646|CRT,CRISPRCasFinder
CTTGGGTTCCGCTCATGCGTTTACTTTCCTTCTTG
>2.6|1651747|35|NZ_CP045646|CRT,CRISPRCasFinder
CTCTTCCTGGTCTCCGGCTTCCACTCGCGTGAGGC
>2.7|1651815|36|NZ_CP045646|CRT,CRISPRCasFinder
GGTGCGGCTCGCTCTGTGGGATCTCGCCTGTCGGGT
>2.8|1651884|36|NZ_CP045646|CRT,CRISPRCasFinder
GACGTTCTTGCCCAGGCTGATCCTGCGATTGACCCT
>2.9|1651953|36|NZ_CP045646|CRT,CRISPRCasFinder
CCAGACACCACGACCCCGGCTGCGGTACACGATACG
>2.10|1652022|33|NZ_CP045646|CRT,CRISPRCasFinder
TGATCGCCGTGATCACGGAGGTCACCACGGTTA
>2.11|1652088|36|NZ_CP045646|CRT,CRISPRCasFinder
TGCCGGTCAGCAGGTTCGCCATGCCCTCGCCGTCCA
>2.12|1652157|35|NZ_CP045646|CRT,CRISPRCasFinder
TGACGAATGGCGGAATCCACTGCCTACGCCTCAAA
>2.13|1652225|35|NZ_CP045646|CRT,CRISPRCasFinder
GTGGTCGGCGGGCAGAAGCCCTTCTGGTCGCTGAG
>2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder
TTTTCGGGCTTTTTTATTTGGTTTGTGGGGATAA
>2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder
AGGTTGGTGATGCGGCGGCGCTGTTCGAGGATGC
>2.16|1652427|36|NZ_CP045646|CRT,CRISPRCasFinder
GTAGCTTTCCTCGACGTGCCCGCCGAACCGGCCGGG
>2.17|1652496|36|NZ_CP045646|CRT,CRISPRCasFinder
GCGGGGCGCGATCGCATCCATGCAGTTCGGCGTGGC
>2.18|1652565|35|NZ_CP045646|CRT,CRISPRCasFinder
GCGCTTGTTCGTGTTCGCTGTTCCCGCCACCGCGA
>2.19|1652633|34|NZ_CP045646|CRT,CRISPRCasFinder
TCGGGCTCCTGATCGTCATCATCTACTTCCAGAT
>2.20|1652700|34|NZ_CP045646|CRT,CRISPRCasFinder
CATACACCGTCCTTGGCTGGGTTCGACTGCAAGG
>2.21|1652767|35|NZ_CP045646|CRT,CRISPRCasFinder
CACGGCTTACTGCCGTGGGGTATATTATTGTTTAT
>2.22|1652835|37|NZ_CP045646|CRT,CRISPRCasFinder
TCCATGCTCGGTGTCCAGATGCTCTCCGGATATGATG
>2.23|1652905|35|NZ_CP045646|CRT,CRISPRCasFinder
CGGGCATATCAATATCCGTCGTGCCCGAAGCGCTG
>2.24|1652973|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
GTTTACGTTCCCCGGTTGCGATTTGTTTCACGTG
>2.25|1653040|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
>2.26|1653106|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
>2.27|1653172|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
AAGTCAACCTCAGCCGCATTGTAACAGGAGGTGA
>2.28|1653239|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
GGAAGCAAGACCGCGCCATGGGCCACCCGACTT
>2.29|1653305|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CTCCGGTTTGTTCCATACGGTCACGCCACGTTC
>2.30|1653371|36|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
TTGCGCCGTGGGTACCGACGTGACGCCGAGCGCGTT
>2.31|1653440|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
GTTTTAATGTGATTTAATGGGACTGTTGCTGAATT
>2.32|1653508|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CGGGTTGGTCTGCTGGGTCATCTCATTGATAACGG
>2.33|1653576|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
GGGAGGTTGCCACGCCCTGCTGTTCCATCTCGT
>2.34|1653642|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
GATATGATGCAATGTATCATCCAGCCCAATGGAG
>2.35|1653709|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CACAATGGAGTTTCGGACGCCGCTTGCAGGTCTT
>2.36|1653776|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
AAGTCGCCACGTCGAAATTCGGACAGTTTCTACGC
>2.37|1653844|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CTATTTCAACATGCGCTACCGGACGCTGGACATG
>2.38|1653911|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
TACGGGACACGCTACAACACCGCCTACTCGCTCCT
>2.39|1653979|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
TGTGCAGCGTATTCACGCTGCCACATCGCGTTG
>2.40|1654045|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
GGTTCGTCTGCTGGGTCATCTCATTGATAACAG
>2.41|1654111|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
TATGCGTTCAATATTTTCTGCGTCATATCATCG
>2.42|1654177|36|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CGGTTCAGTTGGCGCGGACTGCCGCCCACCGTAGAT
>2.43|1654246|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
ACGTTTGCCATCACTGTAATGACGTAGCACGGC
>2.44|1654312|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR
CCGGGACGTGGTGTCGGCGGAGGAAGGCCACGCAA

CRISPR arrays and Neighbor proteins around NZ_CP045646_2

CRISPR arrays

The CRISPR arrays of NZ_CP045646_2

>merge|NZ_CP045646|2|1651375-1654379|CRT,CRISPRCasFinder,PILER-CR
GAAACACCGACTTGACTAAAAACAGGGAGCGACTCGCCAGACCGAAATCCACGCTCAGGCACTCCAAAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGACCTCGCGGACCTCATCCTCGACACCATCAGCAGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTGGCGGGAAACATCATCGGTCGTGGACAAATATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGCGCCATATCCCCTTTGATCTGCCCGTCAAGGCGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTTGGGTTCCGCTCATGCGTTTACTTTCCTTCTTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTCTTCCTGGTCTCCGGCTTCCACTCGCGTGAGGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTGCGGCTCGCTCTGTGGGATCTCGCCTGTCGGGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACGACGTTCTTGCCCAGGCTGATCCTGCGATTGACCCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCCAGACACCACGACCCCGGCTGCGGTACACGATACGATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGATCGCCGTGATCACGGAGGTCACCACGGTTAATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGCCGGTCAGCAGGTTCGCCATGCCCTCGCCGTCCAATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGACGAATGGCGGAATCCACTGCCTACGCCTCAAAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTGGTCGGCGGGCAGAAGCCCTTCTGGTCGCTGAGATTTCAATCCACGCTCCCCGGATGGGGAGCGACTTTTCGGGCTTTTTTATTTGGTTTGTGGGGATAAATTTCAATCCACGCTCCCCGGATGGGGAGCGACAGGTTGGTGATGCGGCGGCGCTGTTCGAGGATGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTAGCTTTCCTCGACGTGCCCGCCGAACCGGCCGGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGCGGGGCGCGATCGCATCCATGCAGTTCGGCGTGGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACGCGCTTGTTCGTGTTCGCTGTTCCCGCCACCGCGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACTCGGGCTCCTGATCGTCATCATCTACTTCCAGATATTTCAATCCACGCTCCCCGGATGGGGAGCGACCATACACCGTCCTTGGCTGGGTTCGACTGCAAGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCACGGCTTACTGCCGTGGGGTATATTATTGTTTATATTTCAATCCACGCTCCCCGGATGGGGAGCGACTCCATGCTCGGTGTCCAGATGCTCTCCGGATATGATGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGGGCATATCAATATCCGTCGTGCCCGAAGCGCTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTTTACGTTCCCCGGTTGCGATTTGTTTCACGTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCAATCGGCAGACCGTATCCTCGGTCGTTAATCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCAATCGGCAGACCGTATCCTCGGTCGTTAATCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACAAGTCAACCTCAGCCGCATTGTAACAGGAGGTGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGAAGCAAGACCGCGCCATGGGCCACCCGACTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTCCGGTTTGTTCCATACGGTCACGCCACGTTCATTTCAATCCACGCTCCCCGGATGGGGAGCGACTTGCGCCGTGGGTACCGACGTGACGCCGAGCGCGTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTTTTAATGTGATTTAATGGGACTGTTGCTGAATTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGGGTTGGTCTGCTGGGTCATCTCATTGATAACGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGGAGGTTGCCACGCCCTGCTGTTCCATCTCGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACGATATGATGCAATGTATCATCCAGCCCAATGGAGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCACAATGGAGTTTCGGACGCCGCTTGCAGGTCTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACAAGTCGCCACGTCGAAATTCGGACAGTTTCTACGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTATTTCAACATGCGCTACCGGACGCTGGACATGATTTCAATCCACGCTCCCCGGATGGGGAGCGACTACGGGACACGCTACAACACCGCCTACTCGCTCCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGTGCAGCGTATTCACGCTGCCACATCGCGTTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTTCGTCTGCTGGGTCATCTCATTGATAACAGATTTCAATCCACGCTCCCCGGATGGGGAGCGACTATGCGTTCAATATTTTCTGCGTCATATCATCGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGGTTCAGTTGGCGCGGACTGCCGCCCACCGTAGATATTTCAATCCACGCTCCCCGGATGGGGAGCGACACGTTTGCCATCACTGTAATGACGTAGCACGGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACCCGGGACGTGGTGTCGGCGGAGGAAGGCCACGCAAATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP045646|2|2|1651375-1654379|CRT
GAAACACCGACTTGACTAAAAACAGGGAGCGAC	TCGCCAGACCGAAATCCACGCTCAGGCACTCCAAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GACCTCGCGGACCTCATCCTCGACACCATCAGCAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTGGCGGGAAACATCATCGGTCGTGGACAAAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCGCCATATCCCCTTTGATCTGCCCGTCAAGGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTTGGGTTCCGCTCATGCGTTTACTTTCCTTCTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCTTCCTGGTCTCCGGCTTCCACTCGCGTGAGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTGCGGCTCGCTCTGTGGGATCTCGCCTGTCGGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GACGTTCTTGCCCAGGCTGATCCTGCGATTGACCCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCAGACACCACGACCCCGGCTGCGGTACACGATACG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGATCGCCGTGATCACGGAGGTCACCACGGTTA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCCGGTCAGCAGGTTCGCCATGCCCTCGCCGTCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGACGAATGGCGGAATCCACTGCCTACGCCTCAAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGGTCGGCGGGCAGAAGCCCTTCTGGTCGCTGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTTTCGGGCTTTTTTATTTGGTTTGTGGGGATAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGTTGGTGATGCGGCGGCGCTGTTCGAGGATGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTAGCTTTCCTCGACGTGCCCGCCGAACCGGCCGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGGGGCGCGATCGCATCCATGCAGTTCGGCGTGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGCTTGTTCGTGTTCGCTGTTCCCGCCACCGCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGGGCTCCTGATCGTCATCATCTACTTCCAGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CATACACCGTCCTTGGCTGGGTTCGACTGCAAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACGGCTTACTGCCGTGGGGTATATTATTGTTTAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCCATGCTCGGTGTCCAGATGCTCTCCGGATATGATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGGCATATCAATATCCGTCGTGCCCGAAGCGCTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTTACGTTCCCCGGTTGCGATTTGTTTCACGTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTCAACCTCAGCCGCATTGTAACAGGAGGTGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGAAGCAAGACCGCGCCATGGGCCACCCGACTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCCGGTTTGTTCCATACGGTCACGCCACGTTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTGCGCCGTGGGTACCGACGTGACGCCGAGCGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTTTAATGTGATTTAATGGGACTGTTGCTGAATT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGGTTGGTCTGCTGGGTCATCTCATTGATAACGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGGAGGTTGCCACGCCCTGCTGTTCCATCTCGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GATATGATGCAATGTATCATCCAGCCCAATGGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACAATGGAGTTTCGGACGCCGCTTGCAGGTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTCGCCACGTCGAAATTCGGACAGTTTCTACGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTATTTCAACATGCGCTACCGGACGCTGGACATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TACGGGACACGCTACAACACCGCCTACTCGCTCCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGTGCAGCGTATTCACGCTGCCACATCGCGTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTTCGTCTGCTGGGTCATCTCATTGATAACAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TATGCGTTCAATATTTTCTGCGTCATATCATCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGTTCAGTTGGCGCGGACTGCCGCCCACCGTAGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACGTTTGCCATCACTGTAATGACGTAGCACGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGGGACGTGGTGTCGGCGGAGGAAGGCCACGCAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP045646|2|2|1651443-1654379|CRISPRCasFinder
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GACCTCGCGGACCTCATCCTCGACACCATCAGCAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTGGCGGGAAACATCATCGGTCGTGGACAAAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCGCCATATCCCCTTTGATCTGCCCGTCAAGGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTTGGGTTCCGCTCATGCGTTTACTTTCCTTCTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCTTCCTGGTCTCCGGCTTCCACTCGCGTGAGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTGCGGCTCGCTCTGTGGGATCTCGCCTGTCGGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GACGTTCTTGCCCAGGCTGATCCTGCGATTGACCCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCAGACACCACGACCCCGGCTGCGGTACACGATACG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGATCGCCGTGATCACGGAGGTCACCACGGTTA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCCGGTCAGCAGGTTCGCCATGCCCTCGCCGTCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGACGAATGGCGGAATCCACTGCCTACGCCTCAAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGGTCGGCGGGCAGAAGCCCTTCTGGTCGCTGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTTTCGGGCTTTTTTATTTGGTTTGTGGGGATAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGTTGGTGATGCGGCGGCGCTGTTCGAGGATGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTAGCTTTCCTCGACGTGCCCGCCGAACCGGCCGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGGGGCGCGATCGCATCCATGCAGTTCGGCGTGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGCTTGTTCGTGTTCGCTGTTCCCGCCACCGCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGGGCTCCTGATCGTCATCATCTACTTCCAGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CATACACCGTCCTTGGCTGGGTTCGACTGCAAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACGGCTTACTGCCGTGGGGTATATTATTGTTTAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCCATGCTCGGTGTCCAGATGCTCTCCGGATATGATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGGCATATCAATATCCGTCGTGCCCGAAGCGCTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTTACGTTCCCCGGTTGCGATTTGTTTCACGTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTCAACCTCAGCCGCATTGTAACAGGAGGTGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGAAGCAAGACCGCGCCATGGGCCACCCGACTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCCGGTTTGTTCCATACGGTCACGCCACGTTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTGCGCCGTGGGTACCGACGTGACGCCGAGCGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTTTAATGTGATTTAATGGGACTGTTGCTGAATT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGGTTGGTCTGCTGGGTCATCTCATTGATAACGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGGAGGTTGCCACGCCCTGCTGTTCCATCTCGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GATATGATGCAATGTATCATCCAGCCCAATGGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACAATGGAGTTTCGGACGCCGCTTGCAGGTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTCGCCACGTCGAAATTCGGACAGTTTCTACGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTATTTCAACATGCGCTACCGGACGCTGGACATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TACGGGACACGCTACAACACCGCCTACTCGCTCCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGTGCAGCGTATTCACGCTGCCACATCGCGTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTTCGTCTGCTGGGTCATCTCATTGATAACAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TATGCGTTCAATATTTTCTGCGTCATATCATCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGTTCAGTTGGCGCGGACTGCCGCCCACCGTAGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACGTTTGCCATCACTGTAATGACGTAGCACGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGGGACGTGGTGTCGGCGGAGGAAGGCCACGCAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP045646|2|2|1652940-1654379|PILER-CR
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTTACGTTCCCCGGTTGCGATTTGTTTCACGTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CAATCGGCAGACCGTATCCTCGGTCGTTAATCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTCAACCTCAGCCGCATTGTAACAGGAGGTGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGAAGCAAGACCGCGCCATGGGCCACCCGACTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCCGGTTTGTTCCATACGGTCACGCCACGTTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTGCGCCGTGGGTACCGACGTGACGCCGAGCGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTTTAATGTGATTTAATGGGACTGTTGCTGAATT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGGTTGGTCTGCTGGGTCATCTCATTGATAACGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGGAGGTTGCCACGCCCTGCTGTTCCATCTCGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GATATGATGCAATGTATCATCCAGCCCAATGGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACAATGGAGTTTCGGACGCCGCTTGCAGGTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTCGCCACGTCGAAATTCGGACAGTTTCTACGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTATTTCAACATGCGCTACCGGACGCTGGACATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TACGGGACACGCTACAACACCGCCTACTCGCTCCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGTGCAGCGTATTCACGCTGCCACATCGCGTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTTCGTCTGCTGGGTCATCTCATTGATAACAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TATGCGTTCAATATTTTCTGCGTCATATCATCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGTTCAGTTGGCGCGGACTGCCGCCCACCGTAGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACGTTTGCCATCACTGTAATGACGTAGCACGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGGGACGTGGTGTCGGCGGAGGAAGGCCACGCAA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045646.1|WP_095256858.1|1635851_1636604_+|phosphoserine-phosphatase-SerB	unknown	unknown	gnl|CDD|319803
NZ_CP045646.1|WP_021649100.1|1640048_1641062_+|methionyl-tRNA-formyltransferase	unknown	unknown	gnl|CDD|234567
NZ_CP045646.1|WP_003830251.1|1643385_1643670_+|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl|CDD|234744
NZ_CP045646.1|WP_014484096.1|1655203_1655437_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040
NZ_CP045646.1|WP_131068280.1|1664633_1665176_-|hypothetical-protein	unknown	unknown	gnl|CDD|379250
NZ_CP045646.1|WP_074525147.1|1641356_1643219_-|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|237104
NZ_CP045646.1|WP_014483515.1|1643955_1645176_+|methionine-adenosyltransferase	unknown	unknown	gnl|CDD|235374
NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl|CDD|187820
NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187782
NZ_CP045646.1|WP_095256878.1|1669574_1670540_-|ribokinase	unknown	unknown	gnl|CDD|238579
NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP045646.1|WP_080685065.1|1647346_1648804_+|IS21-family-transposase	unknown	unknown	gnl|CDD|226950
NZ_CP045646.1|WP_025341850.1|1636651_1638961_+|primosomal-protein-N'	unknown	unknown	gnl|CDD|237844
NZ_CP045646.1|WP_042994273.1|1665593_1668902_-|mupirocin-resistant-isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235681
NZ_CP045646.1|WP_003830263.1|1635135_1635831_-|DedA-family-protein	unknown	unknown	gnl|CDD|223659
NZ_CP045646.1|WP_025341852.1|1648800_1649562_+|ATP-binding-protein	unknown	unknown	gnl|CDD|366760
NZ_CP045646.1|WP_021649099.1|1639205_1639910_+|HAD-family-phosphatase	unknown	unknown	gnl|CDD|319790
NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|378245

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	6.8e-59	193.8	0.0
NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	1.4e-32	107.8	0.0
NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.6e-27	88.6	0.2
NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	4.1e-95	312.9	0.8
NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	6.8e-138	454.1	0.0
NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	cas8c	pfam09709_cas8c_CAS-I-C	7e-98	323.2	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP045646.1|WP_095256858.1|1635851_1636604_+|phosphoserine-phosphatase-SerB	gnl|CDD|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.9082e-100
NZ_CP045646.1|WP_021649100.1|1640048_1641062_+|methionyl-tRNA-formyltransferase	gnl|CDD|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	2.33225e-126
NZ_CP045646.1|WP_003830251.1|1643385_1643670_+|DNA-directed-RNA-polymerase-subunit-omega	gnl|CDD|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.88678e-17
NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.07596e-31
NZ_CP045646.1|WP_131068280.1|1664633_1665176_-|hypothetical-protein	gnl|CDD|379250	pfam13542, HTH_Tnp_ISL3, Helix-turn-helix domain of transposase family ISL3.	8.25072e-05
NZ_CP045646.1|WP_074525147.1|1641356_1643219_-|dihydroxy-acid-dehydratase	gnl|CDD|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP045646.1|WP_014483515.1|1643955_1645176_+|methionine-adenosyltransferase	gnl|CDD|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	2.89068e-107
NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	3.77456e-177
NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.78462e-83
NZ_CP045646.1|WP_095256878.1|1669574_1670540_-|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	3.11265e-105
NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.39737e-29
NZ_CP045646.1|WP_080685065.1|1647346_1648804_+|IS21-family-transposase	gnl|CDD|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.9506e-19
NZ_CP045646.1|WP_025341850.1|1636651_1638961_+|primosomal-protein-N'	gnl|CDD|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP045646.1|WP_042994273.1|1665593_1668902_-|mupirocin-resistant-isoleucine--tRNA-ligase	gnl|CDD|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP045646.1|WP_003830263.1|1635135_1635831_-|DedA-family-protein	gnl|CDD|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	8.02095e-44
NZ_CP045646.1|WP_025341852.1|1648800_1649562_+|ATP-binding-protein	gnl|CDD|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.5351e-54
NZ_CP045646.1|WP_021649099.1|1639205_1639910_+|HAD-family-phosphatase	gnl|CDD|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.4378e-46
NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	gnl|CDD|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	7.20591e-90

Protein sequences

>NZ_CP045646.1|WP_025341852.1|1648800_1649562_+|ATP-binding-protein
MNQKNGRTGPGPLRERARSLFISQATIDETLEWATPRQLDAIDRMLATELANREASKRARLMRQARFPVTKSLDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGRGKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGALDSLLRDLARADLIILDEFGYVPFDIDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLIEFTGPSRRVSQALMFGKTDNQ
>NZ_CP045646.1|WP_080685065.1|1647346_1648804_+|IS21-family-transposase
MPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDGLSARPPVRRRRGSVIDEWLPMIEGMLAEDRETWRKQRHTATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAGFLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSNIGPSRLMPGENAECTCQALRNLFEWLGGVPERIVYDNAAGVGRKRFDRIRLTRLFQAFQAHYGFEYTFRNPYSGHEKGGVEARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLGLGDKDHYRKGESQTGLFDEDRKALLPLPAKPFDVVTWTRMKADKYGNITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRVITHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAMPDPLREWIDAQDEATRRDSLRALLHADGESGWRAAVAGMLEILESTGGTDRAGVCLAAARHASGLGPVAYDDPVDLSEYDIAYTKEDE
>NZ_CP045646.1|WP_014483515.1|1643955_1645176_+|methionine-adenosyltransferase
MTEEHRLISAESVTEGHPDKVCDQISDAILDDLLAQDPSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGAQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDNDQPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHKVEIQVAYAIGVADPVSINVETFGTEQGVTRGQIAAAVRKVFDLRPAAIIDELDLKRPIYLKTAAYGHFGRMDVEFPWEKTDKVEELKAAIAGE
>NZ_CP045646.1|WP_003830251.1|1643385_1643670_+|DNA-directed-RNA-polymerase-subunit-omega
MAFGTDPTPDGLANPPIDDLMQHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLVEYQNNEKPLSIAFREIDEGLLEETLGEDDTNEGN
>NZ_CP045646.1|WP_074525147.1|1641356_1643219_-|dihydroxy-acid-dehydratase
MTEMRSAKIMSGRVFAGARALYRAAGVSGDDMGKKPIIAIANSFDEFLPGHVHLNKVGRIVSEAIREAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCADALICIPNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLADGTVKSTDLIDVMYATADDSVSDEELLNYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAQQVVKIAHQYYDDSDDSVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDIERISHTVPCICKASPSGKWEISDVHRAGGITGILGELERAGKLHTNVHSIDYPTLEAKLADWDIMRPTCTEEAKQMYKAAPGHIISPEPWTHTTLFDSLDRDRVNGAIHDIDHPEIHEGGLAVLRGNLAPDGCVVKTAGVPPEIWKFRGPALVVDSQEQAIEVILNDTLKPGMALVIRYEGPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPVALIKNGDIIDIDIEARSVNVELTDEQLDERRRELEAGDGYVAHRDRHVSQALKAYAAFARSADKGATRDPELINKLSGLA
>NZ_CP045646.1|WP_021649100.1|1640048_1641062_+|methionyl-tRNA-formyltransferase
MLKLVFAGTPDVAVPSLQAFAADSRFEVVGVITRPDAPTGRGRKLTPSPVKAAAVELGLTVIDAKPRSPEFMEALNGLHADIAAVIAYGNILPKSVLDAVPMGWYNLHFSNLPKWRGAAPAQRAIWNGDPTTGADVFKVGEGLDDGPIIASLTVELTGRETSGELLTRLAEEGAPMYVDALAAVGDGTAIFTPQPAEGLEYAHKITVEDARINWADPAETIDRQIRACTPHPGAWTELFAEGLIADSGEANEESADLTTAVKPLTLHILAAQPADQTNPNTPIDLDPGELKVGKKNVWAGTGTGTLELTQVKAQGKKAMRAADWARGAHLSPTACVK
>NZ_CP045646.1|WP_021649099.1|1639205_1639910_+|HAD-family-phosphatase
MKGWPGEPDMDYNVLVADGEAATNAGKPITDVIFDFGNVLIYWDPAAVLIPRYSQKTIDAFLDNDISGFYDVNDLMDGGTSTEEAIAIMRERKGDKWADILDYYIKNFRDSLTGIVPGARVLVDDLKAAGIGVWGLSNWEASLFHVAEEQCDILQKLDGKLVSGFVKLRKPHKEIYDAALKEFGIKADGALFIDDKAMNIVGSNDAGIRGVRFQNPVKLRELLIANGVNIPDVQ
>NZ_CP045646.1|WP_025341850.1|1636651_1638961_+|primosomal-protein-N'
MTTSDAQQLTLDGLAPRKRRKRAPAEHTPAEHDPIAQVVLDVQALHLGQTFDYFIDEKDSDAAQPGVLVRVRFGGQRVGGVIWSRTSTSDTPRSSIRYIERVLSPDALVPASMREDIGLIANAYGGTRANILRFAVPPRVAKVEAEQRLTASFRRPVGGSLPDNVQGGFAGRGTLPDGTHPSGSSFEVADSVSEGAAQAYRRIAANYGEANVLNDALHGQRFQSFVFDSLPGAQEWQRNMAWMVATSLSAGKSAVVELPTMREVEDLLPVLRNYGLKPFSPTPSGGWIGDVAVLNAQMPAADRYRAYLAVALGQVKVIIGTRAVMYAPVEGPALFAILEDAAYQNMDGMMPYPQARGVMRLRAKSHGGVFVAMANARTVQSQWENTGPGTVETPVSGYSTAIHPLASPLKDATPWVRWLNRDELARLADATIGARVPHTAVRALSKALESGPVLLSIPQDSTSEALSCAKCHRQARCAKCSGPLQLPADRSESAPRCQWCGAASIHWTCPGCGHERMRVVRVGAAGTAAELAGLFRSVPMVLSSKAQGLVRDVPCKPMIVIATPGFEPRVRPVSNERGAAGHEYRAVAILDAWTSLYALGVDARLDTLTAWMRAVSLCAPRSRGGQALILGETDPAIAQSLMMWDSRILASKDLDERMETGMPPTVAAACVWGRRDAVMTLMQRIGALGGDWAVCGELPGMLGPVPIAQPDTVDARELEATADRVKAVVRVPQSQRAELAIRLHRETARHVASREPGELRFRIDPKDLI
>NZ_CP045646.1|WP_095256858.1|1635851_1636604_+|phosphoserine-phosphatase-SerB
MSQGFSRIESMTQEDVHFIDKSAESEVGALGGSADSVPTLAEPGLLVMDVDSTLIDEEVIDELGEAAGSGEEIAKVTERAMRGELEFCDALRARVALLEGLPVSVFDTVHDKLHFTKGALELIDTLHAHGWKVGVVSGGFHEVVDKLAAEGHIDYWIANRLEVADGRLTGKVLGEIVCKTVKLHALREWAKQLDIPMSQTVAVGDGANDIPMIQAASLGIAFCAKPKTQLAADEAINDRDLMHVLDYLRR
>NZ_CP045646.1|WP_003830263.1|1635135_1635831_-|DedA-family-protein
MELATALAANPTPICTTSEGGLIGTITEWLITLMETIGGVGVALAIALESVFPPIPSEVILPLAGFTAARGTLSLPGAIIWATIGSLLGAWTLYGISRWVGLHRINRAADKIPGVSRKDVSKANDWFTRYGTWSVLIGRVIPVVRSLISIPAGFNRMNFLQFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIVAVVVVIVWFAVKKVRTVVRNRKAQHGE
>NZ_CP045646.1|WP_014484096.1|1655203_1655437_-|hypothetical-protein
MTMVESLPTYSSAEAEARSKGDNLISMINVYLAGYAAAGMPVDVETTGKTLHALPADTVLRTDADFDAFEHEVLGDD
>NZ_CP045646.1|WP_003833383.1|1655901_1656192_-|CRISPR-associated-endonuclease-Cas2
MMVVVAYDVNTETPDGKRRLRSVAKTCMKYGQRVQNSVFECSVTPSDYLILKHDLAEIMDEMCDSLRYYNLGSKYASKIEHRGRQRHVPVDGVMML
>NZ_CP045646.1|WP_014484097.1|1656248_1657280_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQLLNTLYVTSEDVYLSLKNDNVIVQQGDNTLGRIPLRSLESIISFSYKGASPALMGKCSELGVGLSFFSPRGWYYCSILGEKNRNVLLRREQFRFADDESEALPFARSFIIGKIYNCRWVLERTKRDHALRVNSERIAAQSEKLRQSLANVRNCTSIDELRGVEGLAAKDYFFTFDNLILRDKDDFFFQQRSRRPPLDRANALLSFVYSLLTSDCIAALQGVGLDPYVGFLHTDRPGRASLALDLVEEFRPAIADRFVLTLINTGVIKPSQFEVRENGGVFLSEGGRKTVLAAWQKRKQETITHPFFGEKIPWGLVPHVQALLLNRAIRGDLDAYPPFMWK
>NZ_CP045646.1|WP_014484098.1|1657281_1657971_-|CRISPR-associated-protein-Cas4
MKEPTDYPEDDWLALSGLQHFAFCRRQWALIHIEQQWQDNYLTTAGSLEHDRAHDYSESETRGNLLIMRDLRVFSRRLGITGACDVVEFRQSDEGVPLHGRAGTWLPYPVEYKHGVPKQVDADRLQLCAEAMCLEEMLACSIPEGSLFYQQTKRRERVQFDESLRGQIVAMTSEMHDLFSRGHTPKVRPSKACRACSLSDICLPKIAKTRSAHQFIEESVQAGVEGVAG
>NZ_CP045646.1|WP_014484099.1|1658009_1658861_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTSLQHKIDFVLTFAVENANPNGDPLNGNRPRTTAEGLGEMSDVAEKRKIRNRLQDAGERIFVQSTDRTDDGEKSLSDRWKAFTKTLSKEDQKDREALSYRACEQWIDVRSFGQVFAFKGKEKEGDASVSIPVRGPFTIQSAFSLEPIAIDDVQITKSVNGETTDTNKKSSDTMGMKHRVSGRAVYVTHGSISPQLAEKTGFTEKDAEKIKEALLTLFENDESSARPAGSMEVVNLAWFTHNSKAGQYSSAKVHRTAKVDEEGVITVDTTHIPGLHYEVLEGR
>NZ_CP045646.1|WP_014484100.1|1658864_1660823_-|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG
MSLWSSLLQTYDAVNSSAGITPLNEDVNKTLLPLYHTTLKTQLQVTLDENGYPTIKRDNADIEIIAPCTEQSMGRSGTVLPPHPLFDQLQYIDTNYDPVKHESYLSQLASWKGDNAKLNAIYQYLSQHSIIEEARAQGIGIDPKKDSKIGVRFAVHVRHGDYEPNVWADHAIRDLWIAHEEQVRHGASLGTDLFGETLYKPSTNFPKKIVNVNGNAKLISANDNTNFTFRGRFANRDEALSIDTLTSQKIHTTLRWLAANNGTLTGSQDIVIWAIDGHPTDNVFDPTGNSRDVAEQVDDRTDSEKLIDANVQTYANYAKQFGKLLRGYGNEKVLQQMQQHSRRIVVTIFDAATSGRLSVTFYRELSQNEYIESVLQWHEDAAWYLTCFDNKNSASTDDEAPRGSKKSSDKLKPIPYIGAPSFADIINCVYSTDDHSSDSYRRFAKYVKKQLVECMFSNAGLPASLLQPAFHKVIRPLSYDSLSVWQHDFEVACSMWKKYYIDQDKRLPLNERNNITMDLDEKRTDRDYLFGQLLALADNYEYRVLLRQSGGRTPDRTTNAVKLMNNFVAKPSTTWLTLRQQLNPYIISSTNGMFFQNEVDEVMSKFKEGDFESNKPLSSLFLLGYSHKRRQLIQRADAAKQLKEQNIENKGE
>NZ_CP045646.1|WP_015439067.1|1660825_1661530_-|type-I-C-CRISPR-associated-protein-Cas5
MEKHRNSIEYVIYGDYALFSEVATRTGGEKNSYQIPTYQALKGITESIYWKPTIVWVIDAVRVMNKIQTEGKGIRPIKMSGGNDLSYYTYLKKVKYQVLAHFEWNEQREDLRVDRNENKHHNIAKRSVNLGGRRDIFLGTRECQGYVEPCEFGSGEGFYDGYGDWQFGFEFHSFIYPDENPEHDFIAQFWRPIMHDGIIQFERPDSTQLDQRIIRRNQHVKDFIEGRNFSMAEE
>NZ_CP045646.1|WP_131068280.1|1664633_1665176_-|hypothetical-protein
MRQMWGAWPAVRPAGRAPLAASRHRLRQAPAGARAPEGRLRGARGDRRDGAVARRKSAYTRDFERQVAWLSVHAPRSAVSALMRVDWKSVGPICRRVPLGHRGVLEARREDRPPPLRHPAHHPVRTIQRSPGGRQQQDQDHHQDRLRLQEPRQPHRPGHAQMRRPQPPTPRTPITRKPDQ
>NZ_CP045646.1|WP_042994273.1|1665593_1668902_-|mupirocin-resistant-isoleucine--tRNA-ligase
MSENVYPKVNEGGETAHVAPNPSFPQMEETVLNYWDKDDTFQKSVERNPSGDHSQNEFVFFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVDQIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVDFEHGYKTLNIPYMESVMWAFKQLYDKGLAYQGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVAVKMRDEEDAYAVFWTTTPWTVPTNFAIVVGADIDYVEVRPTEGKFAGKKFYFGKPLLEHYTKELGENYEVVRELKGSELAGRRYYPVFPYFAGEKAETEGNVPGPNGYTIFTADYVDTVEGTGLVHQAPYGEDDMNTLNAHGVKSTDVLDAGCRFTSQCPEYEGMYVFDANLPILRNLRAGDGPLAEIPEDQRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVSVTKIKPRLLELNQQINWIPENVKGGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLEELKADFGDYPRDKDGNVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQHFPADYIVEYIGQTRGWFYLLHVMATALFDRPAFKNVICHGIVLGSDGQKMSKHLRNYPDVNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAANGGAGFDARQLRADEVAGLPQMDRYLLARTRRLVERVEKSLNEFAISDACDAVSDFIDVLTNWYIRNTRDRFWNEDATAFNTLYTVLEAFMRVLAPLAPMEAESVWRGLTGGESVHLADWPYVVDEKTGADTELGRVLVDDPVLVAAMEKVREVVSGTLSLRKSAKIRVRQPLAKLTVVAEDVDAVKAYDELLKSELNVKDIEFCTMEDAGSQGLKIVHELRVNARAAGPRLGKQVQFAIKASKSGDWSVNASGAPVVSTPSGDLELVEGEYELINRVEEENAAEAAASVSAALPTGGFVILDTALDDDLLAEGYARDAIRAVQDARKAADLDIADRISLVLTVPAADVAKVEQFKDLIAHETLATSFEVKEGAELAVEVAKA
>NZ_CP045646.1|WP_095256878.1|1669574_1670540_-|ribokinase
MLGLLDDIVASRSRISVIGSMNVDYTVTTKRLPKPGETVNGGPLTLLPGGKSANQASAAARIGAQVRMFGAVGEDANADFLLEHLRDAGVDTSHIAAVAGPSGTTVITVDANGENTIVYSAGSNGEVSVDYVRQSSDALVAADVLGLCLESPMETVTACARLCHDAGLKVLLNDSPFVAELPAELIEASDILLVNEHEMAQLLGIAEPDDDDWDGLDWSDVARQMHDFGFNQAVITLGGDGSVVIDGDDIYRIAPVAVEAIDTTGCGDAFMGTVLAGLASGHALADSAQLASYVSAYAATGFGAQASYGTAAQIRERFGAK

Crispr_ID: NZ_CP045646_3

• CRISPR_ID: NZ_CP045646_3
• CRISPR_location: 2010638-2010784
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP045646_3

Consensus_repeat	Method
AATCTCCTAAAATCCTGTCACTAAG	CRISPRCasFinder

spacers of NZ_CP045646_3

>3.1|2010663|36|NZ_CP045646|CRISPRCasFinder
TCAAAGCCAATGACAGATATTTAGGAAACCAACCCC
>3.2|2010724|36|NZ_CP045646|CRISPRCasFinder
ACTCACTTAGCGACAGTAATTTAGGACGACTGGGAT

CRISPR arrays and Neighbor proteins around NZ_CP045646_3

CRISPR arrays

The CRISPR arrays of NZ_CP045646_3

>merge|NZ_CP045646|3|2010638-2010784|CRISPRCasFinder
TTCGTCCTAAAATTCTGTCACTGAGTCAAAGCCAATGACAGATATTTAGGAAACCAACCCCAATCTCCTAAAATCCTGTCACTAAGACTCACTTAGCGACAGTAATTTAGGACGACTGGGATAATCTCCTAAAATCCTGTCGCTAAG

>NZ_CP045646|3|3|2010638-2010784|CRISPRCasFinder
TTCGTCCTAAAATTCTGTCACTGAG	TCAAAGCCAATGACAGATATTTAGGAAACCAACCCC
AATCTCCTAAAATCCTGTCACTAAG	ACTCACTTAGCGACAGTAATTTAGGACGACTGGGAT
AATCTCCTAAAATCCTGTCGCTAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045646.1|WP_042994334.1|2013624_2014830_-|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl|CDD|235596
NZ_CP045646.1|WP_015439251.1|2013067_2013295_-|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|236066
NZ_CP045646.1|WP_042994333.1|2012207_2013035_-|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl|CDD|180161
NZ_CP045646.1|WP_003829785.1|2009850_2010282_-|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
NZ_CP045646.1|WP_003829786.1|2009142_2009835_-|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
NZ_CP045646.1|WP_019727371.1|2000093_2001716_-|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl|CDD|227136
NZ_CP045646.1|WP_014484324.1|2019600_2019909_-|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|235510
NZ_CP045646.1|WP_025263283.1|2020095_2023113_-|Rne/Rng-family-ribonuclease	unknown	unknown	gnl|CDD|273254
NZ_CP045646.1|WP_042994331.1|1990571_2000054_-|type-I-polyketide-synthase	unknown	unknown	gnl|CDD|227315
NZ_CP045646.1|WP_003831625.1|2010898_2011852_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP045646.1|WP_003829776.1|2019326_2019578_-|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NZ_CP045646.1|WP_025300057.1|2005833_2007933_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP045646.1|WP_042994335.1|2014971_2016234_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213024
NZ_CP045646.1|WP_042994332.1|2004101_2004701_+|biotin-biosynthesis-protein-BioY	unknown	unknown	gnl|CDD|376871
NZ_CP045646.1|WP_042994338.1|2017568_2019260_-|GTPase-ObgE	unknown	unknown	gnl|CDD|237045
NZ_CP045646.1|WP_042994336.1|2016329_2017463_-|glutamate-5-kinase	unknown	unknown	gnl|CDD|235460
NZ_CP045646.1|WP_095256869.1|2004702_2005662_-|biotin--acetyl-CoA-carboxylase-ligase	unknown	unknown	gnl|CDD|223417
NZ_CP045646.1|WP_025300058.1|2008011_2008869_+|polyketide-synthase-regulator	unknown	unknown	gnl|CDD|225306
NZ_CP045646.1|WP_077320687.1|1989260_1989695_+|hypothetical-protein	unknown	unknown	gnl|CDD|223508
NZ_CP045646.1|WP_025263277.1|2001708_2003589_-|ATP-grasp-domain-containing-protein	unknown	unknown	gnl|CDD|227111

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP045646.1|WP_042994334.1|2013624_2014830_-|pyridoxal-phosphate-dependent-aminotransferase	gnl|CDD|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP045646.1|WP_015439251.1|2013067_2013295_-|preprotein-translocase-subunit-SecE	gnl|CDD|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	2.83757e-12
NZ_CP045646.1|WP_042994335.1|2014971_2016234_+|polysaccharide-deacetylase-family-protein	gnl|CDD|213024	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins. This family contains an uncharacterized protein yadE from Escherichia coli and its bacterial homologs. Although its molecular function remains unknown, yadE shows high sequence similarity with the catalytic NodB homology domain of outer membrane lipoprotein PgaB and the surface-attached protein intercellular adhesion protein IcaB. Both PgaB and IcaB are essential in bacterial biofilm formation.	5.84215e-62
NZ_CP045646.1|WP_003829785.1|2009850_2010282_-|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	8.69761e-91
NZ_CP045646.1|WP_003829786.1|2009142_2009835_-|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.72993e-143
NZ_CP045646.1|WP_042994333.1|2012207_2013035_-|transcription-termination/antitermination-factor-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	2.84273e-65
NZ_CP045646.1|WP_014484324.1|2019600_2019909_-|50S-ribosomal-protein-L21	gnl|CDD|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	4.17736e-35
NZ_CP045646.1|WP_025263283.1|2020095_2023113_-|Rne/Rng-family-ribonuclease	gnl|CDD|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	3.87186e-153
NZ_CP045646.1|WP_042994331.1|1990571_2000054_-|type-I-polyketide-synthase	gnl|CDD|227315	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein].	0
NZ_CP045646.1|WP_019727371.1|2000093_2001716_-|acyl-CoA-carboxylase-subunit-beta	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP045646.1|WP_003829776.1|2019326_2019578_-|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	5.68869e-49
NZ_CP045646.1|WP_042994332.1|2004101_2004701_+|biotin-biosynthesis-protein-BioY	gnl|CDD|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	7.31325e-28
NZ_CP045646.1|WP_042994338.1|2017568_2019260_-|GTPase-ObgE	gnl|CDD|237045	PRK12296, obgE, GTPase CgtA; Reviewed.	0
NZ_CP045646.1|WP_042994336.1|2016329_2017463_-|glutamate-5-kinase	gnl|CDD|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	3.59148e-174
NZ_CP045646.1|WP_095256869.1|2004702_2005662_-|biotin--acetyl-CoA-carboxylase-ligase	gnl|CDD|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	8.75493e-30
NZ_CP045646.1|WP_025300058.1|2008011_2008869_+|polyketide-synthase-regulator	gnl|CDD|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.77745e-16
NZ_CP045646.1|WP_077320687.1|1989260_1989695_+|hypothetical-protein	gnl|CDD|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	6.28896e-15
NZ_CP045646.1|WP_025263277.1|2001708_2003589_-|ATP-grasp-domain-containing-protein	gnl|CDD|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0

Protein sequences

>NZ_CP045646.1|WP_003829785.1|2009850_2010282_-|50S-ribosomal-protein-L11
MAPKKKVSALIKLQIQAGKANPAPPLGPALGSHGVNIMDFCKAYNAQTQDKMGQVIPVEITVYEDRSFTFVLKTPPAAALLKKAAGIEKGTENPLTHKVGSVTKAQVREIAETKMEDLSARDIEAGMKIIEGTARSMGITVTD
>NZ_CP045646.1|WP_003829786.1|2009142_2009835_-|50S-ribosomal-protein-L1
MVKRSKKYREAAERVDRNNLYTANEAIALLKSMPSYNFDQTVEAVFRLSVDPRKADQLVRGTVNLPHGTGKTAKVLVFARGPKATEATEAGADIVGDDDLIAKVQGGFLDFDAVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKNGNLSFLIGKMSFDESALDENFKAVADEVKRLKPSTVKGRYLTKATITSTMNPGVPVDPNTLA
>NZ_CP045646.1|WP_025300058.1|2008011_2008869_+|polyketide-synthase-regulator
MSDFLELLAADAANSSDFTDRSGISATDRARTVLFECLFNHLADDRVASLFTILGFEHDFTCYAIAGYPARSAARSRVDIEKIVADFGGTCLTAERPITGLTGADNGTGRTAVVALIRPVGAATPEIICNTIAPAFDADRPIALGSQRTGAEGAMRSVQATLYCLRAAPALAATAQSLPRPLRTDDALPERALIGDEDARDELIRVVYGSLTAAGPDDPTLLTVSTFLKYGGSLETCAKELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRMATAQ
>NZ_CP045646.1|WP_025300057.1|2005833_2007933_+|hypothetical-protein
MTSPASSLPAAAAHPRLARVGAAARWMLAVLACLWLALCTAVGPLYWDFENGTIANWNWTNTAFFVLSFAIYLGLIVIMVRFAAGQRVLPRAISGRLNRAGQQHSNQALEPSQSQSVVADSNVSKRHATAASRFATLGRWITRGTNRFWKLALVFFIGWLWVPTTLLAAFGADIRSQIREFSWAWNQWTGLQQPYIGFFSFVPMDIYPTAHYMWPPDSTYLTDQHNVVLTVFYGAVAAFSRYLTGSNDAGIVALAAGQMLLAVFCCAATANRFLNRPWMGVAQSTKDKNGSSTGNVSSTTSARIAQDAAPQLAGGHARFLILAFFLCCPLAVFATISITKSPLFAFSFVWWFGIWYELTQTWKPEGKRKGLTATAPIRLPRHSFVAFVLSTAVMLISAKYAWYIIALQIVLALIADRRRWTTYVVALLIPTMLIHGGISLAISSGAIIGGDPIESRGVQLQMIARVASRNPEGISEEAKKNLSDVFNLDQMADAYSQQDADPVKSSGIQAKKVSYKWRTVMPEDMTNFNKAWFEIVKDNPVIALDALLAKCFGYFNVTDQPYVSMDYYVTSDYVQKNSTWIKSYNHNWRERITGFTRSWGKIPVIGWITHGNFYVVMTLLIGAAEVIRRRWLTLMTHIPLLLLMGVMITAPANNFERHMLPVAFVFGFVVLTYWRESLAERRIARQAQSSASTTTTLPQ
>NZ_CP045646.1|WP_095256869.1|2004702_2005662_-|biotin--acetyl-CoA-carboxylase-ligase
MGGFVRFFARHRESGRANRGNVVPMMIALQAATPQLPRTKAVADQVVAVGETDSTNALAARMIGDGSLTLPERKGGTLAVGVVATDWQSAGRGRNGHTWISQPGRCSTMSYAVRIPRAIATDESVNGWLQMIAGLVTLDALNGMIKEYGAAPNKQDCFLELKWPNDVFCHGLKLGGLLSELVLLPDGEADDDVVVVFGVGLNLALGASRLPTPQSTSLQLHVSGLPSFNEMRDAVAEREVEGFRERLAAFIADPHGQAEALREEMKAVCWARGRQVEAHFTDSTTLIGEAIGLNEDASLILRTEDGTDHTVRTADVGVL
>NZ_CP045646.1|WP_042994332.1|2004101_2004701_+|biotin-biosynthesis-protein-BioY
MQTSHTTSSTAATASLGRRIVAASWKPALFAVLMWLSAAAGAIPIPGTPVPITLQTFVVMLAGLMLPWRQAGSAVAAYLAAGAVGLPVFAGGASTMALVGPSAGFLFGFLPGVIVIALLRGKANTSSASAAALTAGRYLLAALVGGVVVVYALGFVIQSALTGAPIAAVALASMGFVAGDTIKAVVASLAAAGLSKLGR
>NZ_CP045646.1|WP_025263277.1|2001708_2003589_-|ATP-grasp-domain-containing-protein
MAHIVKKLLIANRGEIALRVVRTAKEMGISTVAVYSEQDRNSRYVDMADEAYLLSGDTYKDTYLNEDLLIDILHKTGADAVHPGYGFLSEVPSFAQKVEDAGAIWVGPHHTALVDLGDKITARRVALRAKVPPVPGLSEPVTDVRTLLDFAHTHGYPIMMKRTDGGGGHGITVVHDDEELRRFYMNHDALQGGDLKEYFIEKFVDKARHVETQSGRDSHGNFTVYSTRDCSLQRRNQKLVEEAPAPFLPEEIVSTLEEYSRRLFTTVGYVGLGTCEFMVTPNGKVYFLEVNPRLQVEHTVSEEVSGLDLVREQLNIAAGGELTRAPEPRGHSFELRITSEDPATNLTPGSGTLEKIQWPAGPGVRIDTGVEQGDTISPKFDSMMGKVIVTAQNRLDAVARVRRVLDELVIEGVPTPIPLFKEIFRNDDFTAENGHPFSVSTKWLERTYLNRTPASASSGQPASLAGAAAPAAPDKSTSETFVIEMNNRRVKLTVPLDIVENITGSARARGAKRPTQPLRGAGLHNVASGAAKANDGAKSGVIASPMQAVVTRINVSEGQQVAKGDLLVVLESMKMENYVYAPAAGEVKKIFVGPADGVEAGDTLVTLDVNAGKAKAEDSKKEGGND
>NZ_CP045646.1|WP_019727371.1|2000093_2001716_-|acyl-CoA-carboxylase-subunit-beta
MTDIMDSPAVKAVTAASATNASQPPAHQPLRAAVVKAAELARAAEERARDKQHAKGKKTARERLDLLFDTGTFEEIGRFQGGNIAGGNAGAAVITGFGQVYGRKVAVYAQDFSVKGGTLGTAEGEKICRLMDMAIDLKVPIVAIVDSGGARIQEGVAALTQYGRIFRKTCEASGFVPQLSLILGPCAGGAVYCPALTDLIIMTRENSNMFVTGPDVVKASTGETISMADLGGGEVHNRVSGVAHYLGEDESDAIDYARTVLAYLPSNSESKPPVYAYAATRAERETAKRLATIVPANERQPYDMLEVIRCIVDYGEFVQVQELFGASALVGFACIDGKPVGIVANQPNVLAGILDVDSSEKVARFVRLCDAFNLPVVTLVDVPGYKPGSDQEHAGIIRRGAKVIYAYANAQVPMVTVVLRKAFGGAYIVMGSKAIGADLNFAWPSSQIAVLGAAGAVNIIHRHDLAKAKASGQDVDALRAKYIKEYETSTVNANLSLEIGQIDGMIDPEQTREVIVESLATLATKRRIKRTTKHHGNQPL
>NZ_CP045646.1|WP_042994331.1|1990571_2000054_-|type-I-polyketide-synthase
MSTFFLNRLTTEPHALAFAGQSAPWPVALADQTTDPSLDEALRGHVAAANRLLAPAAADLLATTGRPVDLFGFTPNPARLSAAADATASVEGVALTQLGALLDLEHLGYSVAAAKPVAVLGHSQGVLAVHMTRAIEAAGSIEAAGKTLDEILAVAALIGAAGTRRVRELGLNPKYGEASPMLSVKGATREQVEALVKRVNNARGPISIAVTNSDNHHVLSGHPEDLAALALETEREHKHQAKLREQKLHGGTVFNPTLEYLEVTLPFHSPLMAEAVEQTVSWAGACGFDQDRTRALAEEVLLNHVDWNARVKALFNAADPAKLWIVDLGPGNTLGKLIGNVVQGTGIGVVEATTLSERSALSTLESEPERTQNWKALAPRVIETPAGAKLVTKFSKLTGKPPVLLPGMTPTTVEPEIVAAAANAGYWAELAGGGQVTAEVFDRHIAALEDELEEGRTVEFNAMFMDRYLWNLQFGSSRIVPKKRASGAPIDGVVVSAGIPELDEAVELIKNLQADGLPYVSFKPGTVDQIRQVVRIAKAVAPTTIMIQVEGGEAGGHHSWEALDDLLAATYAEVRACDNLVLVAGGGIGTPERAADYISGQWAHAYGLPDMPVDGVLIGTAAMTAKEAHTSPEVKQMLVKTPGIPADAKSDDVFAPQAAHWVPSGKSVGGMSSGLSHLHADIYELENDSAECGRLLVRVMKYPEELDSRRKEIIEALSKTAKPYFGDLASMTYLEWAQRFAELAFPWADPTYADRFQHLLQRIEARANDTDSGEFTSKLFAADGVSADEAAAAGLLTRDGILADPAPALEKLALAYPQTAELKVVPADVAWFPVLVREYPKPMPFVPVIDNDLLRWWGQDQLWQSEDQRYSADSVRAIPGPISVAGITTVDEPIADILGRFENAAIERVKAEQNASESNDFAALGEAVSAEDFIRKSPNISWVGHIADNPAYGTALGDQYYEIRAFDAAAGKYDLDIHLDTYWDNDPDGGTSKHAVRDIVIPLIVEGTELGRVPVVDRERLIPDVYAMLAATAGIGNTAITGDKLTEMPTLSVPSDEGAVTANAVTEGETAQNRPFGTATATYTLSANLGFDHEAATGAALPATLQPSRIAPDALVGPAWPAIYTALGSVYVKGYPVIEGLLNAVHLDHLIELEVNEEDLLKHTGETITLKSWAEDYFESASGRVVTIHVTHTAADGTLLARETERFAIRGRVYSDALPADAPEFGDAEHAEVAPTPRRLLRRVKVVAPHDMTAFARTSGDFNPIHTSTRGARISGLAAPLVHGMWLSATAQHAVQALDEKGAHYEIAGWTYNMYGMVQLDDTVEISVERVGKVRHGGMTLEVTCRIGGQLVSRGTALVRAPRAAFVYPGQGIQKQGMVLDERAKSAAARDVWERADKLTRAKLGFSILGLVRDNPKELTANGVTYRHPEGLLNLTQFTQVALATVAFAQTARLREAGADIWPAYFAGHSLGEYNALSAFADVIPLETVLELVFHRGSTMHHLIERDAQGRSNYRMGALRPNQFGVDDAHVKEYVESVAKASGEFLEIVNYNLAGQQYAIAGTIAGLKALKADSARRVAAFGGKPAFMLVPGIDVPFHSTLLRKGVPEFRDKLDALLPAYIDYRGRLVDRYIPNLVASPFEMTKEFAAKILEVVPSERIKAALDDPAVWDSYAADDQKLGRLLLTELLSWQFASPVRWIETQALLFGKREQGGLGIEEYVEVGLGNAPTLANLGTKTLRLPEFAGNDTVVYNVGRDEGRVYMTDTDSLVPDDEPEETAAPVETAPAGGSAVAKLGSSAAADAAPAAAAAPAPAAPVSAAPAGAPSGAAVADLPFKASDGIGVLMAYAAKVRLDQIGSNDTTDTLTNGVSSRRNQLLMDISSELGVASVDGAAEATLDKLAQIVNKAAPNYKPFGAVLSEALRDRLRSLFGAAGVKQQYIRDRVANVWQLGEGWVASVLAALLLDTREGSSSRGGDLAKLPTAAVQNKPEADKLIDAAVEVVAQLKGVAVALPSAGGAAGGAVVDSAALDAFAEKVTGSNGVLAATARFVLNELGVAAPAPEESEDENAVVVAAVEAELGSDWPKQVAPRFDANKAILFDDRWASAREDLARAYYDNDPAALNGSFIGLGKTIAAEAQWFADKSNNDELKAAFQKAASEALESVTSDKNASRYANDIAIVTGVSPNSIAAQVVEGLLAGGATVVATSHSFKPSIKAWAKQAYREHATGNAKLWLVPANLSSYRDVDALVDWVGHEQKKTSGATTMILKPAWEPTLFFPFAAPPVHGTLADSGDLFESQARLMLWGVERAIAGFSHIGADANVQHKLHVVLPGSPNRGVFGGDGAYGEVKSAFDAIVNRARAEKVWSSRVTFAHPKIGWVRGTGLMGGNDPLVAVVERHGIHTYSTAQIAAKLLDLCTAESREQALKAPLDVDLTGGLGSEPIDIKALRAEAMADAEKEASSEKAAIEGEKPEGGAAGSTLKALPTPIVTKQAPVDLADWQNVTARPEDEIVIVSVGELGPWGSGRTRAQAELGIHSDGTVDLSAGAVLELAWNMGLLTWVDSPKPGWYDTDGNLVPEEDIAERYHDEVVARSGIRPFEEGMGDDYKDGADEEEAEVFLDHDVTFSVPTRDVAAEYVKLDEAHTTIAPDEESGEWNVTRHAGSMIRVPRRATMTRTVGGQFPKGFDPTRWGIPASMVGDVDKIALWNIVTTVDAYLGAGFTPAEILESIHPSLVASTQGTGFGGMMSMRKLYLDRFLNHEIPTDILQEALPNVVAAHVMQSYIGGYGNMIQPVSACATAAVSLEEGVDKIALGKADFVVTGAIDDIGVESVIGFGNMNATANSEEMYGKGIDARFFSRANDRRRGGFLESQGGGTILVTRGDIAEKLGLPVAAVVGFIHSYADGAHTSIPAPGLGALAAGMGGKDSKLVRDLAKLGVSADDIAVVSKHDTSTNANDPNESELHNTLAHAIGRTDGNPLFVISQKTLTGHAKGGACIFQVNGLTQLFKSGVIPANVSLDCVDPKLQRDDHMVWIRKPLRIGGGEDEFGRETAGRPVKAGLATSLGFGHVSGFVALVHPGAFEAAVAKADGEAALEAWRERANARLAAGQRHLEEGMMGRAALYEPIDNRRFHEDHRGYDHHEVEKAMLLNPDARLGADGYYEA
>NZ_CP045646.1|WP_077320687.1|1989260_1989695_+|hypothetical-protein
MRALPTTNANPPAAVAAARKAVVEADGVWIFSPEYNYSYPGVLKNLLDWLSPPAGAVPGRVRFRDGRQEGRPVRCRRSVRRRRHARQAQRGAGLWQDRTAAHRQAGRSGSGSRGLGDTDKLTLSDEDEARLAAEADAFLALVAE
>NZ_CP045646.1|WP_003831625.1|2010898_2011852_+|hypothetical-protein
MKTHKEVAALLQTAQREQRCAIGDGGKLYTALRRRTKIGEVVSPYPNLFAATSYWKSLNVEQQSMHLIRALAKVHPTWTFAGLSAACVYQYEHSYSLHNGTVDIVSPKGANCGGASGLNRIYMARCSQYRCQGILVTSPARTLIDCASLPFDKALAIYDSALRLQHVTKLDVETLIVQTDCNETNVKRLLRYANPLRENGGESWTYARIRQLGFAEPLFQTEFDNPANPEMPYRVDFCWKLHDGRIIVVEYDGIAKYRDTSNPNRANLMAKFEYERQRDTNLKTQGVTSIKHLFYEDVSDLKRLNALLTAIGIPKIR
>NZ_CP045646.1|WP_042994333.1|2012207_2013035_-|transcription-termination/antitermination-factor-NusG
MSDELNLENLDAALENVDAAADEAPVADAPAEAVESAEPVAEAPVASPETVAESAEEESEVNESEQAEETDAGQKAVDEFSKSLRTLDGKWYVLHTYSGYEKRVKTNIESRVASFGMEDQIFQVEVPMEEVEKHTEKGKKVITRVRVPGYVLIRMWPDENARRVVRETEGVTGFVGPSKDPAPLSRQEVVAMMAPMIASEALKAAGDKPAAAKKRKVEVSYAVGDQVTVTDGPFVTMAAVVSDVEPTTQKLTVLVSIFGRDTPVELGFHQVQKLD
>NZ_CP045646.1|WP_015439251.1|2013067_2013295_-|preprotein-translocase-subunit-SecE
MAKTGTNEKAVKPNVFMRIGLFIKQIIDELRKVVTPTAKELFFWSLAVFIFVLLLMALVTGMDFGLGKATLGIFG
>NZ_CP045646.1|WP_042994334.1|2013624_2014830_-|pyridoxal-phosphate-dependent-aminotransferase
MAQWQILSDRINTVAPSATLAVDSKAKAMKAAGLDVIGFGAGEPNFPTPANVVKAAADACLDPKNYKYTPTPGLPELREAIAAKVLRDSGYEVNADQVVVTNGGKQAVYEAFQILLNDGDEVIIPTPYWTSYPEAVKLADGVPVEVFAGADVNFEPSLEALEAARTERTKAIIVNSPNNPTGAVWKPETVEAIGRWAVEHHIWIISDEIYEHLNYDDARTTYIGAAVPECRDQLLVLNGVAKTYAMPGWRVGWMVAPAEVAKAATKLQGHMTSNVANISQRAALAAVSGPLDEVYEMRKAFDVRRSAIVAALNDIEGVYCPTPTGAFYAFADITALLGKPLGSNGTVCATSADFAAALLDEAHVAAVPGEAFGAPGYLRFSYALADDDLAEGMKRFKDWAK
>NZ_CP045646.1|WP_042994335.1|2014971_2016234_+|polysaccharide-deacetylase-family-protein
MAKHHESHGSRGTRRSTVEPRVAYSRHAETHSAHGSQLHYGQHASHRSAAAIAAQRTRRIAVLVVAAVVAVALVITVGVVAHGWFVRQSAPSMQQQLPTTAHKSLTRKTVPQLDPGNIVIGVNGSETTYVLKGEQYVEGGAHAIEPEDGVLTGNIVTTGTVDTNTPGDYTVQYTVHDSTGHEASATRTVKVVDTMDKQTGGIPVLMYHYVYDPANPPADVDANWIPTTSLEPQLQYLTQNNFYYPSWPEVRAFIDGKHSLPKNSIVMTFDDGEPHFFQYGTPLLAKYKVPATSFIIGADGEALNKMKTYATPYLEYESHSFDMHRAGGTVGHGGRISAMSHQEIVDDLKQSEQVTGSLQAFAYPFGDTTPDAIEAVRETGTLAAFTTQYGWADVGADPMNLPRVRIQGTGSLDTFIAAIQ
>NZ_CP045646.1|WP_042994336.1|2016329_2017463_-|glutamate-5-kinase
MSTPSQAEVRRMIAAAGTIVVKVGSSSLTQPSGHLDPDKLDALTAALAQVWLMGARVVLVSSGAIAAGFGPLGFDERPADVATQQATAAVGQGLLMARYEAAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIRFGDNDRLSALVANLVRAEALVLLTDVDALYTAPPAQPGSRRVEYVPNVIDALGDIRVSGSGSKVGTGGMVTKLEAARVAAVSGIPTVLTCASNAGPAMMGDPVGTVFAPVKARGSSRRLWIGFAAEPRGTIVVDAGAAKAIRGGRASLLAAGALDVHGDFSAGDPVWIDDESGTHLARGLAGFDSEEIPQTLGRNTAQLKRFLGDQYAHPLVHRDNLVLV
>NZ_CP045646.1|WP_042994338.1|2017568_2019260_-|GTPase-ObgE
MSDFVDRVTVHVRGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFMPHRTAGNGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKTKHPGEQLADLRHEGDRVVVAQGGAGGLGNIALANRTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSSLIAAMSAAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHIERTEIIAHVIDCATLEPDRDPMSDYQALENELALYADKLELPLGAIPIPERPRIVILNKIDVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALAELVHEMREEVASREKAEEEARVVIKPLERTGRRPRRADEGGNALDFTVERRELGNGEVFYEVRGAKPERWVMQTNFDNDEAVGYLADRLAKLGVEDELRRKGARPGDEIRIGRGDRMVEFDWDPTISAGAEMLDGSNLGARGKDLRLEEQDPRAHRRSNAERRAQYHEMMDARAAVRDAMMAERKAGHWADPTVDDDRHDETSLFGHGESADDSASEE
>NZ_CP045646.1|WP_003829776.1|2019326_2019578_-|50S-ribosomal-protein-L27
MAHKKGASSSRNGRDSSPQYLGVKKFGGEAVVAGNIIVRQRGTNFHAGQNVGMGKDHTLFALADGSVKFGVRRDRKVVDVIAA
>NZ_CP045646.1|WP_014484324.1|2019600_2019909_-|50S-ribosomal-protein-L21
MYAIVKAGGHQEKVEVGDTILVNRLDAKKGDTVEFPVALLVDGAKVTLAAADLAKVSVKAEVVNDEAKGPKINIQKYKNKTGVARRKGHRQPLTIVKITAIA
>NZ_CP045646.1|WP_025263283.1|2020095_2023113_-|Rne/Rng-family-ribonuclease
MPTENREGFVGDETDNSTVSNTESQASGASEPNAEASQPTRRRRGGRRVVRGTGAAGASLELQVQEHAAPLFEAPALPDADASASTGTADNNASDDEKRPARRTRSRRSADNADYEDRPTRRRAVADDDDEPRPVRRRRAVSDDLEEDDERPIRRRRSVIDDLEDDDAPRSSRRRTAVDDSDEDGDRPVRRRRSTTNDRDDRDDEPRSARRTRSRRSSEDAREENPDERVLDVIDALPAGHESARRGKPMTSLLFQEPVLPDMRRDDRDDEEDDGEQRSRSSRRSRAREDEADYEERPSRSRRSNRSDHGDHDDRDDHDDRDDSRNNRRRNEAQDDFDADDQSDSRRSRRSRRLNAQERRAAAEVEQIEEDLELDDITYSPIAEEENDEESDSTRTRSRRRRRRGSRNESGASNNDSESSENNGDDSRRRRDDRDERDRDDDEEQTVTRRRRRRRGGKNAESGDEQDDQQLTRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLMEQDFLARRENVDRLMVVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGASEEAIVKDLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFGKLIVEGDKVYGRIEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFILHDQPTVSADYDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAAAAVAANNTEEE

Crispr_ID: NZ_CP045646_4

• CRISPR_ID: NZ_CP045646_4
• CRISPR_location: 2158278-2158354
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP045646_4

Consensus_repeat	Method
CCCAACCAATCGAAGAACCACCCCG	CRISPRCasFinder

spacers of NZ_CP045646_4

>4.1|2158303|27|NZ_CP045646|CRISPRCasFinder
TCCACGGACCCTCAACGGGGCAAATCT

CRISPR arrays and Neighbor proteins around NZ_CP045646_4

CRISPR arrays

The CRISPR arrays of NZ_CP045646_4

>merge|NZ_CP045646|4|2158278-2158354|CRISPRCasFinder
CCCAACCAATCGAAGAACCACCCCGTCCACGGACCCTCAACGGGGCAAATCTCCCAACCAACCGAAGAACCACCCCG

>NZ_CP045646|4|4|2158278-2158354|CRISPRCasFinder
CCCAACCAATCGAAGAACCACCCCG	TCCACGGACCCTCAACGGGGCAAATCT
CCCAACCAACCGAAGAACCACCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045646.1|WP_003829604.1|2160000_2160606_-|DUF624-domain-containing-protein	unknown	unknown	gnl|CDD|377412
NZ_CP045646.1|WP_095256876.1|2164048_2165377_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|379175
NZ_CP045646.1|WP_003829589.1|2166582_2166960_+|DUF4235-domain-containing-protein	unknown	unknown	gnl|CDD|379422
NZ_CP045646.1|WP_095256875.1|2153525_2157284_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|274008
NZ_CP045646.1|WP_042994365.1|2148250_2150119_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP045646.1|WP_042994367.1|2151748_2153272_-|amino-acid-permease	unknown	unknown	gnl|CDD|224038
NZ_CP045646.1|WP_042994364.1|2146289_2148119_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP045646.1|WP_015439325.1|2162824_2163841_+|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP045646.1|WP_042994362.1|2145339_2146281_+|FAD:protein-FMN-transferase	unknown	unknown	gnl|CDD|376782
NZ_CP045646.1|WP_003829606.1|2158476_2159949_+|amino-acid-permease	unknown	unknown	gnl|CDD|224038
NZ_CP045646.1|WP_003829587.1|2167055_2167823_+|NADPH-dependent-oxidoreductase	unknown	unknown	gnl|CDD|380322
NZ_CP045646.1|WP_042994360.1|2143816_2145235_-|sodium:solute-symporter	unknown	unknown	gnl|CDD|340890
NZ_CP045646.1|WP_003829602.1|2160757_2161600_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP045646.1|WP_032734693.1|2141669_2142017_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP045646.1|WP_095256877.1|2165797_2166496_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NZ_CP045646.1|WP_014484409.1|2161599_2162454_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP045646.1|WP_095256874.1|2142137_2143187_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl|CDD|223390
NZ_CP045646.1|WP_042994368.1|2157293_2157995_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP045646.1|WP_015439328.1|2167988_2170736_+|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl|CDD|224428
NZ_CP045646.1|WP_003832377.1|2141007_2141679_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP045646.1|WP_003829604.1|2160000_2160606_-|DUF624-domain-containing-protein	gnl|CDD|377412	pfam04854, DUF624, Protein of unknown function, DUF624. This family includes several uncharacterized bacterial proteins.	1.29089e-07
NZ_CP045646.1|WP_095256876.1|2164048_2165377_-|ABC-transporter-substrate-binding-protein	gnl|CDD|379175	pfam13416, SBP_bac_8, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	9.23642e-35
NZ_CP045646.1|WP_003829589.1|2166582_2166960_+|DUF4235-domain-containing-protein	gnl|CDD|379422	pfam14019, DUF4235, Protein of unknown function (DUF4235). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 88 and 119 amino acids in length.	4.09412e-11
NZ_CP045646.1|WP_095256875.1|2153525_2157284_-|FtsX-like-permease-family-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	3.82789e-20
NZ_CP045646.1|WP_042994365.1|2148250_2150119_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.38443e-141
NZ_CP045646.1|WP_042994367.1|2151748_2153272_-|amino-acid-permease	gnl|CDD|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	2.196e-154
NZ_CP045646.1|WP_042994364.1|2146289_2148119_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.74447e-179
NZ_CP045646.1|WP_015439325.1|2162824_2163841_+|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.61006e-78
NZ_CP045646.1|WP_042994362.1|2145339_2146281_+|FAD:protein-FMN-transferase	gnl|CDD|376782	pfam02424, ApbE, ApbE family. This prokaryotic family of lipoproteins are related to ApbE from Salmonella typhimurium. ApbE is involved in thiamine synthesis. It acts as an FAD:protein FMN-transferase, catalyzing the attachment of an FMN residue to a threonine residue of a protein via a phosphoester bond in such bacterial flavoproteins.	5.09687e-23
NZ_CP045646.1|WP_003829587.1|2167055_2167823_+|NADPH-dependent-oxidoreductase	gnl|CDD|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	1.55485e-77
NZ_CP045646.1|WP_042994360.1|2143816_2145235_-|sodium:solute-symporter	gnl|CDD|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.2736e-44
NZ_CP045646.1|WP_003829602.1|2160757_2161600_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.68174e-62
NZ_CP045646.1|WP_095256877.1|2165797_2166496_-|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	3.17492e-48
NZ_CP045646.1|WP_014484409.1|2161599_2162454_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.2199e-52
NZ_CP045646.1|WP_095256874.1|2142137_2143187_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl|CDD|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	5.02272e-105
NZ_CP045646.1|WP_042994368.1|2157293_2157995_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.75911e-99
NZ_CP045646.1|WP_015439328.1|2167988_2170736_+|YhgE/Pip-domain-containing-protein	gnl|CDD|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	3.4728e-89
NZ_CP045646.1|WP_003829606.1|2158476_2159949_+|amino-acid-permease	gnl|CDD|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0

Protein sequences

>NZ_CP045646.1|WP_042994368.1|2157293_2157995_-|ABC-transporter-ATP-binding-protein
MAYIEFDKVVKEYPSGGTSIRALDEASFTADQGELTVILGQSGAGKTTALNILGGMDTATSGRVVVGERDITGLRKRDLITYRRNDVGFVFQFYNLVPNLTALENVELASQICPDHFDPAETLRKVGLGERMNNFPGQLSGGEQQRVSIARAIAKKPKLLLCDEPTGALDYETGKEVLQLLQDICRDEGMTVMVITHNSALAPMAHKVIHFRSGTVTSEEINTVPQPIADIEW
>NZ_CP045646.1|WP_095256875.1|2153525_2157284_-|FtsX-like-permease-family-protein
MATARHSHTGFPGGRPVKHLVKQRSQSVKRPVKQSESDDRGSSVSAVFVKDALRCWLRSWKRFVSIAVITLLGVAVLTGIYAGCRDAFLAASRFYDQQGLHDLQVLSTYGLTGDDVAALRRVEGVETVQPERSQTVTATVKGTKKTVTMQGIGTEGLDQPYLQQGDMPSKAGEVAVTQQFLNDSGLEIGDDLTVTPRSASSTVLVGAEDKSNSGSSKSSDGDTGTVGAAEDATTSNNEKEQSPQFPTELTITAVVLDPSDLNNPAGYSGMTAFRSTSSEDYVFFAPSDVVTGNVYTAISIAVAGASQYDTFSDDYDAAIKTVADRIESQIQTQRQKARRQQIVTSAQNTLDAAKADALKQLDEGQQQIDSNRAELEANETKLAESRTQLEQNKASITDGERQIAEGRAQIASARQQIAQGRQQIAGARAQLESGKTQLTSARQQLDAARAELTANRSKVEQGIAQIDQGVAQLDQMLQLIQQADDLLSQLDPNIDIDSSTWQTVKQLLTSLGITVPDVPSISSLRQQLDAKQNELQSQRSDAIKQKTELQQTLDGTIAPAQNALDQQNAQLTAKEQEAAAGEAELNAKLAELESNTAQLETQSAQLEAQAAQLASGKQQLEEGEKQLKDGEQQLEDGKQQLEDAQQELDEKRSEAESEFAKQQRRIDDVANARWYMQTRSSIDGFSSLKSDVSSIESIGRAFPVVFLLVAVLMSLTTMTRMVEEDRGLIGTYLGLGYGGVVVSLRYLLFALLACLFGGGVGLLVGFLGIPAFLLIVIKGLYILPDVRLEYDWGYGTAGILLFVVGVGVATALACRSEIRHTPAALMRPKAPKAGARILLERIRPVWNRLSFLGKVTARNIFRFKSRLLMTVGGVAGCTALIICGFAINDTVDTIGVKQYGQIYQYDLMVVSNDDDAAAMRKQVKKDGRTTETLNLRVDSAEMSNAAQESETIQLMAVPNNSLNKLNDMVTLEEAGDEGWFGLPNFFGASGGGTVTLDDSGVIVAQSAANSLGVHTGDTVTVSNGGSSRAKIKVAAVVRNLIGSDVYISERLYDQKFAARGIDSSVSDGESSTLTWNAMLAKLKGSDGEQAEYADRLGEESSVVKAVSCAHLEATFKFDLMAAVVALIVGLAGGLALVVLFTLANTNVSERVREMATLKVLGFYDREVHNYVNREMMILTGMGVVVGLPLGRWIGGLLTAALNMPSLYFEVEVHWYSYAIAVAATLAFALLVQLFTNPVLDRIEPVSSLKSVE
>NZ_CP045646.1|WP_042994367.1|2151748_2153272_-|amino-acid-permease
MADTNANGNAQQSGSKLKSVESLDQTNAMERGLSNRHVQFIAIGGTIGTGLFLGSGKSISLTGPSIVFVYILVGVIMFFLMRAIGEMMYRDPSQHTFINFITRYLGNGWGHFAGWTYWAALVLLGMTEITAVSTYFITFFDTFGIDLTHWKWLIELCFLVSLVSVNLIAVKVFGEVEFWFSMIKITLIGAMIVTAVVMIVVGYQYPAARIHGVDHVSPAGHAGLDNLFAGFSFAPNGWMAFLMSFQMVFFAYELLEFVGVTVSETKNPRKVLPKAVNEIIVRVLVFYVGALVAIMCIVPWTSFKPNEDGSFASPFIMVFQYAGLNWASALVFFVVITAASSSLNSLLYSAGRHLYQLSEVSPSPLLNKIGQVSDRKVPARAILVSAVLILLSPIVNAIPGVSGAFVLFSSASSAVFLFIYILTLVAHRKYRRSDDFIPDGFVMPAWKVLNTVAIVFFVFIYLTLFLADDTRNSAIAGLVWLIGFGGFSLLRERYRSRDLKAALEHKE
>NZ_CP045646.1|WP_042994365.1|2148250_2150119_-|ABC-transporter-ATP-binding-protein
MFRIMKYLSKAEIGQMLIALVSIVGQIWFDLELPDYMSDITTLVETPGSAMADIWTAGGKMLLISLGSVCCAIITGYIAARVASSFGQRLRSLEFRKVESFGPAEMSKFSTASLITRSTNDITQIQMFITMGLQLIVKSPIMAVWAVCKIAGEGFEWTVATAIAVVILLVAVVILMALVMPKFKAMQGLTDNINLVARENLTGLRVVRAYNAEDYQESKFTKANKDLTDTQLFTNRTMAIMMPLMNTVMNGLMLAVYWIGAYLIEAAELTDKLTVFSNMVVFSSYSVQVIMSFLLMSMVFVLWPRADVSAQRVMEVLNTEPIVKNGTKRVADIAKTGQTGTVEFKDVSFTYPDSREAMLQGINFKAEKGQTVAFIGSTGSGKSSLINLVPRFYDVSAGQVLVDGVDVRDYDMVALRDKIGYVPQRSVLFKGTVAGNISYGDKPGENDAVELADTSTPAGRKREALQLAADAANDGKLTDEQMSRVKAAADVAQASEFVNRMDGGFDSPIAQGGSNVSGGQKQRLSIARAVYRHPEILIFDDSFSALDFKTDRAVRDALAEEAKDSTKLIVAQRIGTIMNADRIVVLDEGKVVGQGTHRELLENCEVYRQIAESQLSESELTA
>NZ_CP045646.1|WP_042994364.1|2146289_2148119_-|ABC-transporter-ATP-binding-protein
MPRGPMGRGGAVEKPQDFGKVMGKLVRFCRKYVPAIIIALVLGAAGTICQIIGPDKLKDMTNEITKGLPAVVHGKPVLNSIDMGAVARIGWLLVVLYVGYALLSYIQSWMMATVTQRTAQELRESISKKINKLPLSYFDKVSYGDVLSRITNDVDAIGQTLGQSLGSLITSATLFVGALVMMFYDNWIMALCAIGSSIIGLIIMMVIMKASQKYFTRQQVALGDVNGHVEEMYAGHTIVKAYNGEADSIRRFERYNADLYDSGWKSQFLSGLMMPLMNFVGNFGYVVVCVVGAALAMDGQIEFGVIVAFMMYIRLFTQPLSQFAQAFQNLQRCAAASERVFGFLEESEMADESGKQALLGAQGHEVHGDVEFSHVRFEYEAGKPIINDFSASVSSGQKVAIVGPTGAGKTTMVNLLMRFYEIAGGSIAIDGVDTKSVPRWNVHDQFSMVLQDTWIFNGTVRENIAYSKPGVTDERIISACKAVGLHHYIMSLPNGYDTVLDENSSLSAGQKQLLTIARAMVQDAPILILDEATSSVDTRTEELIQKAMDALTVDRTSFVIAHRLSTIRDADMILVMNHGDVIERGTHEELLAAGGFYADLYNSQFALSD
>NZ_CP045646.1|WP_042994362.1|2145339_2146281_+|FAD:protein-FMN-transferase
MTGLTEQLPHTAAFPNALGTGLLLHTASALGGDLHQHIEDLISDYENVLSRFKGDSIVGQMRVATHGGTFDFPDWTLNLFDLYDHLFSATNGAIDPCVGEDLIRLGYDKSYSSVNEPNAAEHTGAIHGRATWDHAIEHHGTTLVTHGPVALDFGACGKGYLVDLIAERLGAAQSDLRYVIDAGGDLLVHTSEPITIALEDPSDPANAVGVAEISQGAFCASSPSRRHWTDAAGHQLHHLLNAIDGVPVNSVAATWVAATPPSLATAQADGLATALFTTPAAQLRAHFPFECAILTADRSAAQSPDFPGSFFMR
>NZ_CP045646.1|WP_042994360.1|2143816_2145235_-|sodium:solute-symporter
MDNATAVSATNVSGGSLQSTIKDLPIAKVWAFAVGQFGWALLSGIISNWLVYFYQPDQETISQGQTVFVPQGLVVLGLVTVVGGITAFARFFDAFVDPAVASLSDRCDSKAGRRMPFLKFAALPLAVVTVLVFWSPINGTSWVNAAFLFVTVIGYYIALTFYCTPYNALIAELGHDSKQQLTISTAISFTWVAGTAIAYVAPVIWGAFVPMMGRITAIRVTFTIMAAVAFACMLVPPLAIREKDYVNSQPTSESTIESLKQTFSDGEFRKFVCSDVVYWVAITTFQTGLPFFVTSLLKLPETTTTIYFVLMTGVSVLFYLPVNILANRVGKKRLLLIAFVIFTCAFAFAGALGSGVLAFMPAMAQGLTLSVVGAIPMAAFGILPQAIVANIADASSKTTGQDRQGMFYAARTFAMKMGQSVAMLLFTGVSTIGMASGAGYRIAAVCAAVLCGLGGIVFAFYNEKKVLHVLGA
>NZ_CP045646.1|WP_095256874.1|2142137_2143187_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MLFGLGNTGSMTSADELNEQRDAEQSVAQVFERNDGNDGIDAGEPAASQTRESAVTIPAGTVVLAATPIGNVGDASARLVVFLERADIVAAEDTRRLFDLARRLGVYVNGRVVAYHDHNERDKADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDALALSGLPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMDDLLDAFGPNRPMALCRELTKDYEQIRRGPIGEIRQSVIDDPPRGEMVLVIGGASSEEAEAAAPSTLSVEDMAVLAIDRALEDGLRIKDAIAQVVQEHPLADGSLANRKQVYAAVLEIKG
>NZ_CP045646.1|WP_032734693.1|2141669_2142017_+|hypothetical-protein
MRITGRHASRRLDRLHQAQRLPRASDIQSHSPHASAAVNHDAPPSPPIALTPSVACSPDTPIEVLWHIAQHAPELRRWLIANPRADAALLEFISQAGGPGVKRALAVLLESMEEE
>NZ_CP045646.1|WP_003832377.1|2141007_2141679_+|hypothetical-protein
MRMVGHMNAPNRSMTSTIANAGTARHTTVSPSVPPVLFTKDLPGPLSLSRLETFGTIRKFDESAGYWNEHASTLYGRAMIVSTVAPFGTVACALTAAWVWLGGPDFPRTIDVISTSHFRSTSAGRRIRVFRRVTSPEHIIRLGNLPVTTPQRTACDLVMGMDDAPDPSAINTLVCRLMTAYSFRASECLQIIKEHRHHKHAGRARIFFESLQRESEPALGQCA
>NZ_CP045646.1|WP_003829606.1|2158476_2159949_+|amino-acid-permease
MSTTDAPKKPRETDDVPVPATLRKSLKNRHIQLIALGGAIGTGLFYGSSESIALAGPSILLAYLIGGFAIFMIVRALSEMSVEDPKAGAFSYYATRYWSKRAGFISGWNYWFNYILVSMVELAVVGSFVNYWFPAIPTWVSAAVFLVLITAANLLGVSKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTASGIKASFANWFTVGGGFFPNGLMGHTDNGWTGLLMALVVVMFSFGGTELIGITAGETEDPRTTIPRATNDIIWRILVFYIGALGVIMAVVPWNTIDGKSSPFVQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGKLNSKGVPVAGVLTSAVITAIAVVVVFVWPEFAFNYLMSIATIAGIINWTMIMFTEMKFRKVVEAGGAPEDSNLAGKSGQEALDAIHFKLPFAKVTPWVVLVFLALVVVLMCFSASYRIAVIAGVIWLAILFVAYQITQAKK
>NZ_CP045646.1|WP_003829604.1|2160000_2160606_-|DUF624-domain-containing-protein
MNWLAPDSKFMRAWSNLIDGVWVNILMLVTSIPIITIGAALTAGHDACRRSIEGEGKGVTANYFRSFKANFVKATLLWLPFLVVLIALAWSWIVLQFTPLLIIKFALTIIWLIGFEWVFALQARFENTVAGTLKNAFIFGISHIAMTAALVVVDAVFVALLVGSWFYMPGGLFLLVILGYGTMLMLHIPVTERVFKPYLQQ
>NZ_CP045646.1|WP_003829602.1|2160757_2161600_-|carbohydrate-ABC-transporter-permease
MNENKPVKHGALWTVLFAVVSLFWIFPIVLVLINSFKQKAYISKNAFSLPAGKAFVGFENYVRGVETTQFFASFGWTLLITVGSVILILVCTSMCAWWIVRVNNWAAKLLYTLFLFNMIVPFQMVMFTLSKIADMLKLNTPWGLCIVYLGFGAGLAVFIFTGVIKGIPAELEESAMIDGASVPRIFFQIVVPIMKPSIVSVAILEAMWIWNDYLLPYLTLDLGKYKTISVAVQYLKGGYGSVDMGAMMACLVLAIIPIIVFYLVCQKYIVSGVMAGAVKG
>NZ_CP045646.1|WP_014484409.1|2161599_2162454_-|sugar-ABC-transporter-permease
MISMAGKAIRRWWALFALPTFAAFIIGFLVPFIMGVYLSFCEFTTVTDGEWIGLKNYTKALKDKEFLHALGFSTAFTIVTTIVINVIAFAIAYMLTKAIKGSTLFRSVFFMPNLIGGIILGYIWLLLLNGVLAHWGRALTYKASYGFWGLVILVCWQQIGYMMIIYIAGLQALPTDVLEAAAVDGANGRQTMFRIIIPLMMPSITVCSFLTVTNGFKLYDQNLALTNGAPSNMSEGLALNITRTFYGRMGWEGVGQAKAVLFFILVAVIALIQNKLTTSKEVAA
>NZ_CP045646.1|WP_015439325.1|2162824_2163841_+|LacI-family-transcriptional-regulator
MTTSIQDVAQKAGVSISTVSRSFTRPDLVSTKTRERVLAIADELNFSLSRSAAALKSGRSLRIAVLMSGHIRLWFTASVIEGLNEVLHAAGYDISVFQISSIEERREFFEMLPVRRNADAVIVVSFDIDNNEITQLASADVPIIGINSVDPEVRGFTAAVNINDVQGSTLAARHLINLGHRDIAYISTDRDVSLNFSVQNRFGAFTECCRNEGIEPQVIVCKVDDAGRYQISDVVTQLMSLPKLPTAIACQEDGIALPLMFQLERNGLSVPGDVSLIGYDDSFYTDDIGLTTIRQNPVGMARKAAHMTLDLIEEKPVDEPYVVAPAHLVVRSSTAKIR
>NZ_CP045646.1|WP_095256876.1|2164048_2165377_-|ABC-transporter-substrate-binding-protein
MMNRTVKSAVAVAAIAAMSLGTLAACGSSTSGDDSKGKVYYLNFKPEAADQWAALAKEYTKEKGVEVKVQTAASGTYEQTLKSEIAKTEAPTLFQVNGPVGYQNWKKYTADMSKTDVYKELTNQDVALKDGDKVVGVPYVMETYGLIYNKDILNKYFALDGAKATSMDEIDNFDTLKAVADDMQSRKDELGIKGAFTSAGFDSSSDWRFKTHLANLPLYYEFKDDNVTEQPAKIKGTYLPNYKKIFDLYITDSTTEPTQLSAKTGDDANSEFALGEAAFYQNGTWAWTDLQKAGMKAESVGMMPIYIGVKGEEKQGLATGSENYWCINDKASDADKKATEDFLSWVITSDAGKKALSQDMGFTTPFKTFDDVKSDNPLTEAAVEDQKSGKTQVSWNFTMMPSEEWKNKIGQALLEYAQGTGNWDAVKATFVDGWASEYEASH
>NZ_CP045646.1|WP_095256877.1|2165797_2166496_-|histidine-phosphatase-family-protein
MDGTVAVDASCGKAGFLVLLRHGQTFWSESGQHTGRTNIPLTEVGRQQAMDAGARLREAFPEGFDPECVFSSPLKRACQTAELAGFAQHGILDGIAEWDYGRAEGRTRQQVSEASGFSWDVWRDGPRSLTPTLEGDWVDTLPDGEQVNVHSGAGETLDEVAARARTDIEEVTPLLQSGRNVLLVAHAHILRILTSQWLNVDPQFARLLRLDTAHYSVLSVYKGDNVIERWNA
>NZ_CP045646.1|WP_003829589.1|2166582_2166960_+|DUF4235-domain-containing-protein
MSDETSTGIASDADRVVEGLHRIDQKVDDLRNQRLNDPDSLGDKLVKSAVPALAGLVAGKLFQIAWDKGAARRNVIKGLAADAPQGLAMSLAFAAISAAFGAIVSQLSNQGSQAFVERRHRKASR
>NZ_CP045646.1|WP_003829587.1|2167055_2167823_+|NADPH-dependent-oxidoreductase
MATNATIETLLNRRSIRKFKDEPIDDDATATLETVAQHAASSQFLNDWSAIRVSDPAIKARLAEIGNQPYIATAPLLYVFVIDEHRNAHIAQRKGIDPTSDEFHLKYSYRFTQAQNDAVLALHAMETAAYSLGLGGVILGSLLNDIPALIDLLNLPEYTYPVLGLALGKPDQEPTLKPRMPRSMQFFDNTYPADDDGMLEQLPDFDNKVHQYYDLRQTDRPVDAFSDQIASVSRQGVSGKTLLDKAAAQGFQLDK
>NZ_CP045646.1|WP_015439328.1|2167988_2170736_+|YhgE/Pip-domain-containing-protein
MRTVWQVFLRDCKRILRNPVAAVVTLGVAVLPSLYAWFNILANWDPYSATGNLQVAVANEDRGTTNDLVGHLNAGKQVVIKLKHNDQLGWRFVSNEEQAVQGVQTGDYYAAIVLPKDFSASLVDSLTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDEQINSTFVTTVSNTVAAAISQAGDDLDQATNSTQNNVVADLGSVLSTIATVQDALTDLRTTLDQSDTALADARSTTASLQRSITAAQQASQQSGALLAETQDGSQVFAASLVSALDTSSAQLSGLTVNVNNAAGTINQSFNTAQNSVDTITNALNSPLDKTATSLDTLKDALNKAGISADTTDPTGKRIWDHINAIDDAISTQQAKINTFHEDTTRFIDSGKSATTNLSGAMSGTATGGIAALNTARSSLTGTVMPSLTSSLNSFAALNGTLNGTLTSLSGTLDQTNGLFDQLSSTIAQTRTTIGSAQDSLNQIIDDVSTVRTDVATLDSSAVYQKIRDTMHLDDKGFGEFMGSPVTLTTKVVYAIDNYGSAVTPFYTNLALWVGGFVLIAIYKLEVDRESIRRINAKQAYLGRWMLLVTIGFLQAIIATVGDLVLGIQCEHPLLFILAGIFCSFIYINIIYALAVAFRHIGKAIAVILVIVQIPGASGLYPIEMMPDFFRKLHPWLPFTYGINAMRGPIAGTYSNHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFDRRLGDTDLMITEHNSMVNEQVSLASVFRTVSDSKELKAIITRRAHRFFARYPMMIVAGLALLTILPFVFLILLFVTQEKIAMLTSWILSIILIDAYLIVVEYTRESYAMQLGVSAMNADEFRDVMLNGYVWRRFRSHGRHEAASAESAVDTDPDIGEVTEQLTPFERTGSTDSSDSSKSSESTITDTNPAQGGAR

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045646_1	1.13|1647057|34|NZ_CP045646|CRISPRCasFinder	1647057-1647090	34	NC_017767	Thermus thermophilus HB8 plasmid pVV8, complete sequence	58815-58848	6	0.824
NZ_CP045646_1	1.40|1647068|34|NZ_CP045646|PILER-CR	1647068-1647101	34	NC_017767	Thermus thermophilus HB8 plasmid pVV8, complete sequence	58815-58848	6	0.824
NZ_CP045646_1	1.5|1646519|34|NZ_CP045646|CRISPRCasFinder	1646519-1646552	34	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	1174959-1174992	7	0.794
NZ_CP045646_1	1.9|1646790|34|NZ_CP045646|CRISPRCasFinder	1646790-1646823	34	NZ_CP017887	Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence	231055-231088	7	0.794
NZ_CP045646_1	1.32|1646523|34|NZ_CP045646|PILER-CR	1646523-1646556	34	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	1174959-1174992	7	0.794
NZ_CP045646_1	1.36|1646797|34|NZ_CP045646|PILER-CR	1646797-1646830	34	NZ_CP017887	Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence	231055-231088	7	0.794
NZ_CP045646_2	2.29|1653305|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1653305-1653337	33	MN856085	Myoviridae sp. isolate 322, complete genome	5771-5803	7	0.788
NZ_CP045646_1	1.13|1647057|34|NZ_CP045646|CRISPRCasFinder	1647057-1647090	34	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	456877-456910	8	0.765
NZ_CP045646_1	1.13|1647057|34|NZ_CP045646|CRISPRCasFinder	1647057-1647090	34	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	623506-623539	8	0.765
NZ_CP045646_1	1.13|1647057|34|NZ_CP045646|CRISPRCasFinder	1647057-1647090	34	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	105074-105107	8	0.765
NZ_CP045646_1	1.40|1647068|34|NZ_CP045646|PILER-CR	1647068-1647101	34	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	456877-456910	8	0.765
NZ_CP045646_1	1.40|1647068|34|NZ_CP045646|PILER-CR	1647068-1647101	34	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	623506-623539	8	0.765
NZ_CP045646_1	1.40|1647068|34|NZ_CP045646|PILER-CR	1647068-1647101	34	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	105074-105107	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP034568	Vibrio parahaemolyticus strain D3112 plasmid p2, complete sequence	92066-92099	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP033143	Vibrio parahaemolyticus strain 160807 plasmid pVPWZ1, complete sequence	27712-27745	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP010885	Vibrio parahaemolyticus strain CHN25 plasmid P1, complete sequence	73144-73177	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP013250	Vibrio parahaemolyticus strain FORC_022 plasmid, complete sequence	25345-25378	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP034291	Vibrio parahaemolyticus strain 20140722001-1 plasmid pVPCZ2014-1, complete sequence	67777-67810	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP021149	Vibrio campbellii strain LA16-V1 plasmid pLA16-3, complete sequence	48573-48606	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP007006	Vibrio parahaemolyticus UCM-V493 plasmid pVPUCMV, complete sequence	19195-19228	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP034300	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-1, complete sequence	33412-33445	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP034296	Vibrio parahaemolyticus strain 20140829008-1 plasmid pVPGD2014-1, complete sequence	33869-33902	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP019298	Vibrio campbellii strain LMB29 plasmid pLMB96, complete sequence	48036-48069	8	0.765
NZ_CP045646_2	2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder	1652293-1652326	34	NZ_CP033139	Vibrio owensii strain 1700302 plasmid pVOWZ1, complete sequence	88964-88997	8	0.765
NZ_CP045646_2	2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder	1652360-1652393	34	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	947-980	8	0.765
NZ_CP045646_2	2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder	1652360-1652393	34	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	947-980	8	0.765
NZ_CP045646_2	2.16|1652427|36|NZ_CP045646|CRT,CRISPRCasFinder	1652427-1652462	36	MN908687	Gordonia phage Skog, complete genome	10742-10777	8	0.778
NZ_CP045646_2	2.33|1653576|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1653576-1653608	33	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	220380-220412	8	0.758
NZ_CP045646_2	2.41|1654111|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1654111-1654143	33	NC_019909	Yersinia phage phiR1-RT complete genome	84221-84253	8	0.758
NZ_CP045646_2	2.41|1654111|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1654111-1654143	33	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	76492-76524	8	0.758
NZ_CP045646_2	2.44|1654312|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1654312-1654346	35	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	26121-26155	8	0.771
NZ_CP045646_2	2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder	1652360-1652393	34	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	181373-181406	9	0.735
NZ_CP045646_2	2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder	1652360-1652393	34	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	241595-241628	9	0.735
NZ_CP045646_1	1.5|1646519|34|NZ_CP045646|CRISPRCasFinder	1646519-1646552	34	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	149248-149281	10	0.706
NZ_CP045646_1	1.19|1646514|39|NZ_CP045646|CRT	1646514-1646552	39	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	1174954-1174992	10	0.744
NZ_CP045646_1	1.32|1646523|34|NZ_CP045646|PILER-CR	1646523-1646556	34	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	149248-149281	10	0.706
NZ_CP045646_2	2.10|1652022|33|NZ_CP045646|CRT,CRISPRCasFinder	1652022-1652054	33	NZ_CP006371	Aureimonas sp. AU20 plasmid pAU20d, complete sequence	39703-39735	10	0.697
NZ_CP045646_2	2.33|1653576|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1653576-1653608	33	NZ_CP038639	Cupriavidus oxalaticus strain X32 plasmid unnamed4, complete sequence	336171-336203	10	0.697
NZ_CP045646_1	1.6|1646586|34|NZ_CP045646|CRISPRCasFinder	1646586-1646619	34	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1684394-1684427	11	0.676
NZ_CP045646_1	1.6|1646586|34|NZ_CP045646|CRISPRCasFinder	1646586-1646619	34	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1950643-1950676	11	0.676
NZ_CP045646_1	1.33|1646591|34|NZ_CP045646|PILER-CR	1646591-1646624	34	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1684394-1684427	11	0.676
NZ_CP045646_1	1.33|1646591|34|NZ_CP045646|PILER-CR	1646591-1646624	34	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1950643-1950676	11	0.676
NZ_CP045646_1	1.34|1646659|35|NZ_CP045646|PILER-CR	1646659-1646693	35	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1371549-1371583	11	0.686
NZ_CP045646_2	2.35|1653709|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR	1653709-1653742	34	NZ_CP026974	Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence	354984-355017	12	0.647

1. spacer 1.13|1647057|34|NZ_CP045646|CRISPRCasFinder matches to NC_017767 (Thermus thermophilus HB8 plasmid pVV8, complete sequence) position: , mismatch: 6, identity: 0.824

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
aggttcagggccgcgttcaggtcccggtccagct	Protospacer
* ********* ******* *********  ** 

2. spacer 1.40|1647068|34|NZ_CP045646|PILER-CR matches to NC_017767 (Thermus thermophilus HB8 plasmid pVV8, complete sequence) position: , mismatch: 6, identity: 0.824

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
aggttcagggccgcgttcaggtcccggtccagct	Protospacer
* ********* ******* *********  ** 

3. spacer 1.5|1646519|34|NZ_CP045646|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 7, identity: 0.794

cggttcggacggcgccatcgaccagtgggtggac	CRISPR spacer
tggttcggacggcgccatcgagcggtgggccatc	Protospacer
.******************** *.*****. . *

4. spacer 1.9|1646790|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP017887 (Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

atccg--ggtgtgattttgaagaccctgcttgacga	CRISPR spacer
--ccggcgaggtgattttgatgaccctgcttggcgg	Protospacer
  ***  *. ********** ***********.**.

5. spacer 1.32|1646523|34|NZ_CP045646|PILER-CR matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 7, identity: 0.794

cggttcggacggcgccatcgaccagtgggtggac	CRISPR spacer
tggttcggacggcgccatcgagcggtgggccatc	Protospacer
.******************** *.*****. . *

6. spacer 1.36|1646797|34|NZ_CP045646|PILER-CR matches to NZ_CP017887 (Pseudomonas frederiksbergensis strain ERDD5:01 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

atccg--ggtgtgattttgaagaccctgcttgacga	CRISPR spacer
--ccggcgaggtgattttgatgaccctgcttggcgg	Protospacer
  ***  *. ********** ***********.**.

7. spacer 2.29|1653305|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to MN856085 (Myoviridae sp. isolate 322, complete genome) position: , mismatch: 7, identity: 0.788

ctccggtttgttccatacggtcacgccacgttc	CRISPR spacer
gttcgggttcttccatacggtcacgcccttttc	Protospacer
 *.*** ** ***************** . ***

8. spacer 1.13|1647057|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
acggtgagcgcggcgttcatgtcccgggcgcggc	Protospacer
*.* * ** ****************** **.*  

9. spacer 1.13|1647057|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 8, identity: 0.765

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
acggtgagcgcggcgttcatgtcccgggcgcggc	Protospacer
*.* * ** ****************** **.*  

10. spacer 1.13|1647057|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
acggtgagcgcggcgttcatgtcccgggcgcggc	Protospacer
*.* * ** ****************** **.*  

11. spacer 1.40|1647068|34|NZ_CP045646|PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
acggtgagcgcggcgttcatgtcccgggcgcggc	Protospacer
*.* * ** ****************** **.*  

12. spacer 1.40|1647068|34|NZ_CP045646|PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 8, identity: 0.765

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
acggtgagcgcggcgttcatgtcccgggcgcggc	Protospacer
*.* * ** ****************** **.*  

13. spacer 1.40|1647068|34|NZ_CP045646|PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.765

atgttcagggcggcgttcatgtcccggtcgtgca	CRISPR spacer
acggtgagcgcggcgttcatgtcccgggcgcggc	Protospacer
*.* * ** ****************** **.*  

14. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP034568 (Vibrio parahaemolyticus strain D3112 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
attggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

15. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP033143 (Vibrio parahaemolyticus strain 160807 plasmid pVPWZ1, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
gttggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

16. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP010885 (Vibrio parahaemolyticus strain CHN25 plasmid P1, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
attggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

17. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP013250 (Vibrio parahaemolyticus strain FORC_022 plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
attggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

18. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP034291 (Vibrio parahaemolyticus strain 20140722001-1 plasmid pVPCZ2014-1, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
gttggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

19. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP021149 (Vibrio campbellii strain LA16-V1 plasmid pLA16-3, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
gttggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

20. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP007006 (Vibrio parahaemolyticus UCM-V493 plasmid pVPUCMV, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
attggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

21. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP034300 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-1, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
gttggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

22. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP034296 (Vibrio parahaemolyticus strain 20140829008-1 plasmid pVPGD2014-1, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
gttggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

23. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP019298 (Vibrio campbellii strain LMB29 plasmid pLMB96, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
attggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

24. spacer 2.14|1652293|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP033139 (Vibrio owensii strain 1700302 plasmid pVOWZ1, complete sequence) position: , mismatch: 8, identity: 0.765

ttttcgggcttttttatttggtttgtggggataa	CRISPR spacer
gttggggcgttttttatttggttttttgggatat	Protospacer
 **  **  *************** * ****** 

25. spacer 2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 8, identity: 0.765

aggttggtgatgcggcggcgctgttcgaggatgc	CRISPR spacer
cggtgcgaagtgcggcggcgcttttcaaggatgc	Protospacer
 ***  * ..************ ***.*******

26. spacer 2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 8, identity: 0.765

aggttggtgatgcggcggcgctgttcgaggatgc	CRISPR spacer
cggtgcgaagtgcggcggcgcttttcaaggatgc	Protospacer
 ***  * ..************ ***.*******

27. spacer 2.16|1652427|36|NZ_CP045646|CRT,CRISPRCasFinder matches to MN908687 (Gordonia phage Skog, complete genome) position: , mismatch: 8, identity: 0.778

gtagctttcctcgacgtgcccgccgaaccggccggg	CRISPR spacer
gatgcgctcctcgacgtgctcgccgaaccgacctcg	Protospacer
*  ** .************.**********.**  *

28. spacer 2.33|1653576|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

gggaggttgccacgccctgctgttccatctcgt	CRISPR spacer
ccgaggtggccgcgccctgctgttccaccgccg	Protospacer
  ***** ***.***************.* *  

29. spacer 2.41|1654111|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 8, identity: 0.758

tatgcgttcaatattttctgcgtca-tatcatcg	CRISPR spacer
tatacgttcaatattttctgggtcgccgccacc-	Protospacer
***.**************** ***. ...**.* 

30. spacer 2.41|1654111|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 8, identity: 0.758

tatgcgttcaatattttctgcgtca-tatcatcg	CRISPR spacer
tatacgttcaatattttctgggtcgccgccacc-	Protospacer
***.**************** ***. ...**.* 

31. spacer 2.44|1654312|35|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.771

ccgggacgtggtgtcggcggaggaa---ggccacgcaa	CRISPR spacer
ccgggaggtggtgtctgcggaggaactggccgatg---	Protospacer
****** ******** *********   * * *.*   

32. spacer 2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 9, identity: 0.735

aggttggtgatgcggcggcgctgttcgaggatgc	CRISPR spacer
cggccgcgcgtgcggcgtcgctggtcgaggatgc	Protospacer
 **..*   .******* ***** **********

33. spacer 2.15|1652360|34|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 9, identity: 0.735

aggttggtgatgcggcggcgctgttcgaggatgc	CRISPR spacer
cggccgcgcgtgcggcgtcgctggtcgaggatgc	Protospacer
 **..*   .******* ***** **********

34. spacer 1.5|1646519|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 10, identity: 0.706

cggttcggacggcgccatcgaccagtgggtggac	CRISPR spacer
ggtttcgggcggcgccatcgacgagtggcaccgg	Protospacer
 * *****.************* *****    . 

35. spacer 1.19|1646514|39|NZ_CP045646|CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 10, identity: 0.744

tcgaccggttcggacggcgccatcgaccagtgggtggac	CRISPR spacer
tgacctggttcggacggcgccatcgagcggtgggccatc	Protospacer
* . *.******************** *.*****. . *

36. spacer 1.32|1646523|34|NZ_CP045646|PILER-CR matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 10, identity: 0.706

cggttcggacggcgccatcgaccagtgggtggac	CRISPR spacer
ggtttcgggcggcgccatcgacgagtggcaccgg	Protospacer
 * *****.************* *****    . 

37. spacer 2.10|1652022|33|NZ_CP045646|CRT,CRISPRCasFinder matches to NZ_CP006371 (Aureimonas sp. AU20 plasmid pAU20d, complete sequence) position: , mismatch: 10, identity: 0.697

tgatcgccgtgatcacggaggtcaccacggtta	CRISPR spacer
agatcgccgtggtcgcggaggtcacggaattct	Protospacer
 **********.**.********** . . *. 

38. spacer 2.33|1653576|33|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP038639 (Cupriavidus oxalaticus strain X32 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

gggaggttgccacgccctgctgttccatctcgt	CRISPR spacer
gctgacgtgccacgccctgctgctccaactcca	Protospacer
*  ..  ***************.**** ***  

39. spacer 1.6|1646586|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 11, identity: 0.676

gtccgatgcctgctgacaaggacaggaaagcact	CRISPR spacer
ttccggtgcctgctcacaaggacagacgaagctc	Protospacer
 ****.******** **********. .*.  ..

40. spacer 1.6|1646586|34|NZ_CP045646|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 11, identity: 0.676

gtccgatgcctgctgacaaggacaggaaagcact	CRISPR spacer
ttccggtgcctgctcacaaggacagacgaagctc	Protospacer
 ****.******** **********. .*.  ..

41. spacer 1.33|1646591|34|NZ_CP045646|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 11, identity: 0.676

gtccgatgcctgctgacaaggacaggaaagcact	CRISPR spacer
ttccggtgcctgctcacaaggacagacgaagctc	Protospacer
 ****.******** **********. .*.  ..

42. spacer 1.33|1646591|34|NZ_CP045646|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 11, identity: 0.676

gtccgatgcctgctgacaaggacaggaaagcact	CRISPR spacer
ttccggtgcctgctcacaaggacagacgaagctc	Protospacer
 ****.******** **********. .*.  ..

43. spacer 1.34|1646659|35|NZ_CP045646|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 11, identity: 0.686

tagtagatttccgcaccgttggcctgcgactcgaa	CRISPR spacer
ccgaccatttccgcaccgtcggcctgggacttttc	Protospacer
. *   *************.****** ****.   

44. spacer 2.35|1653709|34|NZ_CP045646|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP026974 (Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.647

cacaatggagtttcggacgccgcttgcaggtctt	CRISPR spacer
atggttggggtttgggacgccgcttgcagtcaag	Protospacer
   . ***.**** *************** .