CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP045662	Klebsiella pneumoniae strain SMU18037509 plasmid unnamed1, complete sequence	0 crisprs	csa3,RT	3
NZ_CP045663	Klebsiella pneumoniae strain SMU18037509 plasmid unnamed2, complete sequence	0 crisprs	NA	0
NZ_CP045661	Klebsiella pneumoniae strain SMU18037509 chromosome, complete genome	1 crisprs	RT,csa3,cas3,DEDDh,DinG,WYL	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4243 : 58546

Enterobacteria_phage(22.73%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153517945.1\|4243_5167_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.6e-166	92.8
WP_048985180.1\|5882_6347_-	hypothetical protein	NA	NA	NA	NA
WP_153517946.1\|8484_9366_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.7e-164	96.6
WP_153517941.1\|11819_12728_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.4e-165	96.3
WP_023288328.1\|12783_13521_-	hypothetical protein	K4HZD4	Acidithiobacillus_phage	1.3e-55	48.1
WP_032720733.1\|13537_15082_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	4.3e-133	48.6
WP_048984487.1\|15758_17630_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_048984486.1\|17687_18197_-	hypothetical protein	NA	NA	NA	NA
WP_021567410.1\|18248_19004_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_048984483.1\|19000_22285_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	4.3e-66	27.4
WP_048984481.1\|22354_24139_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_048984479.1\|24161_24845_-	YecA family protein	NA	NA	NA	NA
WP_048984478.1\|24841_26047_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_048984476.1\|26036_27560_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.4e-88	38.9
WP_153517947.1\|27828_28752_-\|transposase	IS5-like element IS903B family transposase	Q1MVF0	Enterobacteria_phage	7.8e-175	98.7
WP_053090837.1\|28818_29127_-	hypothetical protein	A0A222YY57	Escherichia_phage	1.6e-15	49.4
WP_011251286.1\|29196_29616_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011251285.1\|29612_29924_-	hypothetical protein	NA	NA	NA	NA
WP_023288266.1\|30679_31018_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	2.3e-47	81.0
WP_004114612.1\|31014_31362_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-60	96.5
WP_064188805.1\|31410_32949_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-277	93.8
WP_017900720.1\|33539_33974_-	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_004152084.1\|34189_35590_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_048985687.1\|35586_36267_-	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	1.5e-29	33.9
WP_004118344.1\|36321_37251_-	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_000025662.1\|37255_37636_-	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_153517948.1\|37675_38572_-	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000925242.1\|38571_40389_-	multicopper oxidase PcoA	NA	NA	NA	NA
WP_000019441.1\|41085_42066_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_000287501.1\|42561_43299_+	peptidase	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.9
WP_000843497.1\|43332_43530_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004187133.1\|43570_46018_-	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	4.4e-84	35.8
WP_048985692.1\|46144_46585_-	hypothetical protein	NA	NA	NA	NA
WP_048985694.1\|46671_49818_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	6.1e-62	22.6
WP_004098959.1\|49828_51121_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_004098961.1\|51234_51588_-	cation efflux system protein CusF	NA	NA	NA	NA
WP_004098962.1\|51616_53002_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_000697969.1\|53191_53872_+	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	36.0
WP_000555737.1\|53864_55340_+	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_000790483.1\|55590_56022_+	silver-binding protein SilE	NA	NA	NA	NA
WP_048985700.1\|56165_56516_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.2e-20	54.4
WP_153517949.1\|57622_58546_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.3e-173	97.4

DBSCAN-SWA_2

66542 : 73705

uncultured_Caudovirales_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152282.1\|66542_67310_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004118251.1\|67408_67702_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_071526715.1\|68032_68275_-	EAL domain-containing protein	NA	NA	NA	NA
WP_007898882.1\|68424_68850_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-51	71.4
WP_007898880.1\|68862_70152_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	4.4e-168	71.1
WP_004206577.1\|70196_70517_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	2.9e-20	44.8
WP_016151343.1\|70602_71301_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.5e-90	69.4
WP_004206574.1\|71429_71735_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004206572.1\|71745_72951_-	chromate efflux transporter	NA	NA	NA	NA
WP_004206571.1\|73126_73705_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	3.9e-23	37.7

DBSCAN-SWA_3

135847 : 142534

Stx2-converting_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004902302.1\|135847_137440_-\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-176	61.8
WP_004189161.1\|137470_137821_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
WP_004189163.1\|137817_138258_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
WP_004902307.1\|138454_138637_+	DUF4113 domain-containing protein	A0A1W6JNT0	Morganella_phage	9.1e-11	57.1
WP_004117790.1\|140396_141368_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
WP_023287153.1\|141367_142534_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045661

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045661_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045661_1

4502913-4503007

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045661_1

>merge|NZ_CP045661|1|4502913-4503007|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCAGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP045661|1|1|4502913-4503007|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCAGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045661.1\|WP_153517933.1\|4506565_4508914_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP045661.1\|WP_004178574.1\|4497087_4499994_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP045661.1\|WP_011977646.1\|4490311_4492021_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP045661.1\|WP_004145972.1\|4489128_4489974_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP045661.1\|WP_002888348.1\|4500006_4500666_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP045661.1\|WP_002888321.1\|4512452_4513301_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP045661.1\|WP_020317174.1\|4494542_4496900_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP045661.1\|WP_004222643.1\|4503148_4504774_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP045661.1\|WP_002888320.1\|4513724_4514204_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP045661.1\|WP_002888337.1\|4504763_4505462_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP045661.1\|WP_002888345.1\|4501459_4502824_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP045661.1\|WP_002888323.1\|4512070_4512448_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP045661.1\|WP_002888329.1\|4508968_4510255_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP045661.1\|WP_002888324.1\|4511246_4512068_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP045661.1\|WP_009485687.1\|4510260_4511250_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP045661.1\|WP_002888353.1\|4493671_4494367_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP045661.1\|WP_002888332.1\|4505494_4506322_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP045661.1\|WP_032448261.1\|4492031_4493534_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP045661.1\|WP_004222645.1\|4500740_4501280_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP045661.1\|WP_002888373.1\|4488232_4489000_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659

Protein	Function_ID	Function_description	E-value
NZ_CP045661.1\|WP_153517933.1\|4506565_4508914_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP045661.1\|WP_004178574.1\|4497087_4499994_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP045661.1\|WP_011977646.1\|4490311_4492021_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP045661.1\|WP_004145972.1\|4489128_4489974_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP045661.1\|WP_002888348.1\|4500006_4500666_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP045661.1\|WP_002888321.1\|4512452_4513301_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP045661.1\|WP_020317174.1\|4494542_4496900_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP045661.1\|WP_004222643.1\|4503148_4504774_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	1.7543e-172
NZ_CP045661.1\|WP_002888320.1\|4513724_4514204_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP045661.1\|WP_002888337.1\|4504763_4505462_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP045661.1\|WP_002888345.1\|4501459_4502824_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP045661.1\|WP_002888323.1\|4512070_4512448_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP045661.1\|WP_002888329.1\|4508968_4510255_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP045661.1\|WP_002888324.1\|4511246_4512068_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP045661.1\|WP_009485687.1\|4510260_4511250_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP045661.1\|WP_002888353.1\|4493671_4494367_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP045661.1\|WP_002888332.1\|4505494_4506322_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP045661.1\|WP_032448261.1\|4492031_4493534_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP045661.1\|WP_004222645.1\|4500740_4501280_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	1.64069e-84
NZ_CP045661.1\|WP_002888373.1\|4488232_4489000_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48

>NZ_CP045661.1|WP_002888345.1|4501459_4502824_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP045661.1|WP_004222645.1|4500740_4501280_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIEALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQIHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP045661.1|WP_002888348.1|4500006_4500666_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP045661.1|WP_004178574.1|4497087_4499994_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP045661.1|WP_020317174.1|4494542_4496900_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFTASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP045661.1|WP_002888353.1|4493671_4494367_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP045661.1|WP_032448261.1|4492031_4493534_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHMVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP045661.1|WP_011977646.1|4490311_4492021_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP045661.1|WP_004145972.1|4489128_4489974_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP045661.1|WP_002888373.1|4488232_4489000_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP045661.1|WP_004222643.1|4503148_4504774_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSQRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP045661.1|WP_002888337.1|4504763_4505462_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP045661.1|WP_002888332.1|4505494_4506322_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP045661.1|WP_153517933.1|4506565_4508914_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQPDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP045661.1|WP_002888329.1|4508968_4510255_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP045661.1|WP_009485687.1|4510260_4511250_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPAELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP045661.1|WP_002888324.1|4511246_4512068_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP045661.1|WP_002888323.1|4512070_4512448_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP045661.1|WP_002888321.1|4512452_4513301_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP045661.1|WP_002888320.1|4513724_4514204_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1641614 : 1648519

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180551.1\|1641614_1642478_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004180550.1\|1642488_1643262_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_032447988.1\|1643502_1644396_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	1.6e-15	29.8
WP_032447732.1\|1644641_1646003_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1646321_1647044_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_032447731.1\|1647040_1648519_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_2

2155371 : 2171786

Salmonella_phage(44.44%)

integrase,transposase

attL 2149499:2149513|attR 2162106:2162120

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2149499:2149513	attL	NA	NA	NA	NA
WP_004184554.1\|2155371_2156619_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	2.7e-114	48.4
WP_012967855.1\|2156618_2156834_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	7.7e-17	54.9
WP_004184543.1\|2156898_2157138_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	2.9e-25	73.1
WP_004184542.1\|2157145_2157454_-	hypothetical protein	I6PD68	Cronobacter_phage	4.2e-24	56.9
WP_040217603.1\|2157450_2158062_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	8.3e-40	77.3
WP_004184539.1\|2158054_2158408_-	hypothetical protein	NA	NA	NA	NA
WP_019704421.1\|2158442_2159531_-	recombinase RecT	H6WRX0	Salmonella_phage	8.0e-102	53.0
WP_117116830.1\|2159543_2162585_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	2.4e-297	60.9
2162106:2162120	attR	NA	NA	NA	NA
WP_023282477.1\|2162722_2162878_-	hypothetical protein	K7PGY4	Enterobacteria_phage	2.0e-14	71.2
WP_117116831.1\|2162886_2163078_-	YebW family protein	NA	NA	NA	NA
WP_023313093.1\|2163470_2164031_-	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	2.0e-08	38.3
WP_023313094.1\|2164171_2164402_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	4.7e-20	63.5
WP_048324700.1\|2164404_2164941_+	hypothetical protein	K7PJT7	Enterobacteria_phage	4.4e-61	69.5
WP_117116833.1\|2165069_2165864_+	hypothetical protein	C7BGF1	Burkholderia_phage	1.8e-63	51.0
WP_117116835.1\|2165929_2166769_+	hypothetical protein	Q8HA96	Salmonella_phage	1.5e-23	51.3
WP_153517866.1\|2166771_2167521_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	1.3e-116	81.5
WP_041937617.1\|2167528_2167897_+	DUF977 family protein	H6WRX9	Salmonella_phage	2.2e-11	39.0
WP_110185435.1\|2167893_2168097_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	9.1e-28	86.6
WP_153517867.1\|2168412_2168727_-	hypothetical protein	NA	NA	NA	NA
WP_000019441.1\|2169242_2170223_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
WP_110185434.1\|2170673_2171786_+	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	8.9e-32	31.4

DBSCAN-SWA_3

2730652 : 2741539

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023313136.1\|2730652_2733760_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004176258.1\|2733814_2735080_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2735110_2736199_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176262.1\|2736285_2736546_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_004176269.1\|2736843_2737704_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002210513.1\|2737724_2738486_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002903955.1\|2738746_2739649_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_004224682.1\|2739660_2740926_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
WP_002210516.1\|2740918_2741539_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

2776830 : 2882591

109

Salmonella_phage(27.12%)

tail,capsid,integrase,terminase,protease,head,holin,portal

attL 2803056:2803072|attR 2892062:2892078

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032429517.1\|2776830_2777568_+\|protease	serine protease	NA	NA	NA	NA
WP_004224649.1\|2777581_2777698_+	hypothetical protein	NA	NA	NA	NA
WP_002903683.1\|2777741_2778071_-	multidrug efflux SMR transporter subunit KpnF	NA	NA	NA	NA
WP_002903681.1\|2778057_2778420_-	multidrug efflux SMR transporter subunit KpnE	NA	NA	NA	NA
WP_002903679.1\|2778862_2779897_+	AI-2E family transporter	NA	NA	NA	NA
WP_004176297.1\|2780121_2781777_+	malonate decarboxylase subunit alpha	NA	NA	NA	NA
WP_021469330.1\|2781776_2782619_+	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
WP_004143106.1\|2782636_2782936_+	malonate decarboxylase acyl carrier protein	NA	NA	NA	NA
WP_032105170.1\|2782928_2783762_+	biotin-independent malonate decarboxylase subunit beta	NA	NA	NA	NA
WP_032447538.1\|2783761_2784562_+	biotin-independent malonate decarboxylase subunit gamma	NA	NA	NA	NA
WP_032447537.1\|2785677_2786295_+	malonate decarboxylase holo-ACP synthase	NA	NA	NA	NA
WP_032447535.1\|2786294_2787197_+	malonate decarboxylase subunit epsilon	NA	NA	NA	NA
WP_002903632.1\|2787186_2788113_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004190310.1\|2788270_2789926_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_004179719.1\|2790189_2791110_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_004179716.1\|2791273_2791630_-	hypothetical protein	NA	NA	NA	NA
WP_004183910.1\|2791785_2793402_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_004176303.1\|2793398_2794118_+	two-component system response regulator DcuR	NA	NA	NA	NA
WP_153517882.1\|2794098_2795049_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_004152245.1\|2795116_2797894_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	6.2e-66	31.1
WP_004148278.1\|2798535_2800047_+	anion permease	NA	NA	NA	NA
WP_004152246.1\|2800101_2801754_+	class I fumarate hydratase	NA	NA	NA	NA
WP_032447533.1\|2801916_2803533_+	mechanosensitive ion channel	NA	NA	NA	NA
2803056:2803072	attL	NA	NA	NA	NA
WP_004143067.1\|2804609_2804999_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_004151556.1\|2804991_2805756_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_032447532.1\|2805745_2807098_-	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA
WP_004179693.1\|2807107_2808310_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_004151559.1\|2808320_2808977_-	CoA transferase subunit B	NA	NA	NA	NA
WP_002903522.1\|2808987_2809674_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_004143057.1\|2809843_2810650_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009760676.1\|2810646_2811210_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_032447972.1\|2811311_2812220_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032414878.1\|2812386_2813697_+	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_023283652.1\|2813696_2815142_+	amidohydrolase	NA	NA	NA	NA
WP_074421941.1\|2815261_2816380_+	aminobenzoyl-glutamate transporter	NA	NA	NA	NA
WP_064155873.1\|2816508_2817606_+\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	3.5e-113	57.3
WP_153517883.1\|2817615_2818452_+	hypothetical protein	NA	NA	NA	NA
WP_153517884.1\|2818733_2819411_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.0
WP_153517885.1\|2819867_2821133_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	5.1e-209	83.4
WP_153517886.1\|2821134_2821554_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	58.3
WP_004152765.1\|2821633_2823118_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_032422722.1\|2824012_2824435_-	hypothetical protein	K7P834	Enterobacteria_phage	8.9e-25	43.8
WP_063266881.1\|2824485_2825064_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	3.0e-92	97.3
WP_153517887.1\|2826986_2827664_+	hypothetical protein	NA	NA	NA	NA
WP_135689293.1\|2827874_2828609_-	hypothetical protein	NA	NA	NA	NA
WP_153517888.1\|2828621_2830772_-	hypothetical protein	B5TAB2	Burkholderia_phage	1.1e-89	42.0
WP_153517889.1\|2830848_2833917_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	96.4
WP_004104210.1\|2833913_2834294_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	2.8e-70	96.8
WP_153517890.1\|2834303_2834786_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	6.9e-82	94.4
WP_153517891.1\|2834966_2835437_-	hypothetical protein	A0A286S298	Klebsiella_phage	6.7e-90	97.4
WP_023343208.1\|2835436_2837872_-\|tail	lambda family phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	88.9
WP_042346245.1\|2837941_2838334_-	hypothetical protein	A0A286S1N7	Klebsiella_phage	3.6e-20	42.2
WP_112293585.1\|2838397_2838661_-\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	7.9e-40	89.7
WP_153517892.1\|2838663_2839047_-\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	5.9e-52	85.5
WP_023343205.1\|2839093_2839624_-	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	8.7e-86	90.3
WP_023343204.1\|2839803_2840286_-	hypothetical protein	Q9MCU9	Escherichia_phage	7.5e-52	58.9
WP_023343203.1\|2840350_2840713_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	1.3e-48	78.5
WP_023343202.1\|2840709_2841195_-	HK97 gp10 family phage protein	A0A0U3TGT7	Pseudomonas_phage	8.9e-53	65.2
WP_060598764.1\|2841187_2841538_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	6.6e-34	62.1
WP_072122458.1\|2841539_2841752_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	2.5e-12	67.1
WP_072122459.1\|2841823_2842150_-\|head,tail	phage gp6-like head-tail connector protein	S4TSQ3	Salmonella_phage	1.1e-25	57.4
WP_153517893.1\|2842146_2843517_-\|portal	phage portal protein	S4TNN1	Salmonella_phage	7.8e-70	83.3
WP_117095359.1\|2843513_2844872_-\|portal	phage portal protein	S4TTG7	Salmonella_phage	2.1e-221	83.2
WP_080819801.1\|2845077_2847012_-\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	0.0e+00	90.8
WP_049009200.1\|2847070_2848729_-\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	2.7e-234	70.9
WP_060598770.1\|2848732_2849245_-\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	1.0e-51	67.3
WP_048290404.1\|2849424_2849793_-	HNH endonuclease	S4TTG9	Salmonella_phage	1.8e-50	79.8
WP_112293582.1\|2849785_2850373_-	hypothetical protein	K7PGW6	Enterobacterial_phage	4.5e-75	66.5
WP_153517939.1\|2850534_2851992_-	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	1.1e-258	87.2
WP_110226811.1\|2852450_2852990_-	hypothetical protein	NA	NA	NA	NA
WP_100751201.1\|2853067_2853313_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.2e-34	97.5
WP_032735910.1\|2854587_2854947_-	hypothetical protein	NA	NA	NA	NA
WP_139015922.1\|2855500_2855620_+	small membrane protein	NA	NA	NA	NA
WP_110227683.1\|2855927_2856200_-	hypothetical protein	NA	NA	NA	NA
WP_012967895.1\|2856667_2856850_+	hypothetical protein	NA	NA	NA	NA
WP_153517894.1\|2857055_2857682_-	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	3.4e-89	76.3
WP_012967892.1\|2857681_2857963_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.8e-32	72.0
WP_004213330.1\|2857949_2858345_-	membrane protein	G8C7V8	Escherichia_phage	1.5e-45	73.1
WP_110226810.1\|2859428_2860718_-	hypothetical protein	NA	NA	NA	NA
WP_142669431.1\|2860714_2861155_-	hypothetical protein	NA	NA	NA	NA
WP_110226809.1\|2861508_2862558_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	8.1e-168	76.5
WP_153517895.1\|2862707_2862899_-	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	1.6e-21	82.5
WP_060598778.1\|2863108_2863939_-	antitermination protein	K7P7B9	Enterobacteria_phage	2.2e-59	46.9
WP_153517896.1\|2863957_2864944_-	DUF968 domain-containing protein	Q8SBE5	Shigella_phage	1.5e-91	49.8
WP_153517897.1\|2865025_2865847_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	5.3e-90	65.4
WP_153517898.1\|2865936_2866335_-	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	8.0e-44	69.7
WP_153517899.1\|2866331_2866808_-\|protease	SOS-response repressor and protease LexA	U5P451	Shigella_phage	6.1e-14	60.3
WP_153517900.1\|2866804_2868655_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	2.7e-198	52.6
WP_153517901.1\|2868647_2870030_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	2.3e-106	48.8
WP_088661490.1\|2870017_2870476_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_064175908.1\|2870472_2871384_-	GntR family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	1.3e-52	73.8
WP_023322342.1\|2871373_2871553_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.6e-13	67.3
WP_008806043.1\|2871725_2872277_-	hypothetical protein	A0A1C9II13	Salmonella_phage	2.2e-68	69.9
WP_023343174.1\|2872321_2872522_-	hypothetical protein	U5P445	Shigella_phage	4.3e-22	80.0
WP_008806042.1\|2872609_2873269_+	LexA family transcriptional regulator	U5P0T5	Shigella_phage	4.7e-113	86.3
WP_153517902.1\|2873466_2873700_+	hypothetical protein	NA	NA	NA	NA
WP_048999619.1\|2874814_2875186_+	hypothetical protein	Q8HAA1	Salmonella_phage	7.0e-50	79.5
WP_116961320.1\|2875238_2876069_+	YfdQ family protein	Q8HAA2	Salmonella_phage	6.0e-126	81.3
WP_153517903.1\|2876204_2876732_+	HD family hydrolase	A0A192Y8M4	Salmonella_phage	1.3e-62	70.5
WP_102015530.1\|2876731_2876932_+	hypothetical protein	NA	NA	NA	NA
WP_102015529.1\|2876924_2877710_+	hypothetical protein	C7BGF1	Burkholderia_phage	5.6e-65	53.7
WP_153517904.1\|2877837_2878254_+	hypothetical protein	R9TME7	Aeromonas_phage	2.7e-10	40.0
WP_153517905.1\|2878247_2878454_+	hypothetical protein	NA	NA	NA	NA
WP_153517906.1\|2878450_2878855_+	hypothetical protein	NA	NA	NA	NA
WP_040227357.1\|2879303_2879729_+	HNH endonuclease	C6ZR29	Salmonella_phage	5.5e-59	81.5
WP_153517907.1\|2880179_2880746_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	4.8e-66	63.0
WP_017880203.1\|2880753_2881017_+	pyocin activator PrtN family protein	A0A1L5C290	Pseudoalteromonas_phage	7.7e-11	44.1
WP_002903398.1\|2881624_2881783_-	hypothetical protein	NA	NA	NA	NA
WP_032447531.1\|2882075_2882591_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.2e-18	46.6
2892062:2892078	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3459983 : 3549969

Salmonella_phage(51.79%)

tail,capsid,lysis,tRNA,plate,integrase,terminase,protease,head,portal

attL 3515559:3515579|attR 3550707:3550727

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002898139.1\|3459983_3461276_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
WP_004224013.1\|3461366_3462710_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	5.6e-81	40.8
WP_002898132.1\|3462718_3463330_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_058343169.1\|3463452_3467706_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
WP_000228469.1\|3467841_3468336_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_004141839.1\|3468841_3469837_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.3e-62	44.0
WP_002898017.1\|3469951_3471718_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
WP_153517918.1\|3471718_3473440_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	9.0e-15	34.0
WP_002898014.1\|3473484_3474186_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3474539_3474758_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3474876_3477156_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3477186_3477504_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3477829_3478051_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3478127_3480068_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_004191152.1\|3480064_3481180_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004176693.1\|3481326_3482985_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_002896434.1\|3483404_3484100_+	aquaporin Z	NA	NA	NA	NA
WP_004183530.1\|3484215_3485115_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_004183528.1\|3485258_3486911_+	hydroxylamine reductase	NA	NA	NA	NA
WP_032447455.1\|3486921_3487890_+	NADH oxidoreductase	NA	NA	NA	NA
WP_002896408.1\|3488101_3488536_-	DoxX family protein	NA	NA	NA	NA
WP_004176700.1\|3488687_3490406_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_004209683.1\|3490444_3491446_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_021313342.1\|3491456_3492899_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_002896399.1\|3492986_3494000_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_032447453.1\|3493996_3494827_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
WP_004176708.1\|3494858_3495998_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_002896394.1\|3496875_3497391_+	lipoprotein	NA	NA	NA	NA
WP_002896392.1\|3497617_3498346_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
WP_002896390.1\|3498366_3499098_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896386.1\|3499104_3499821_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004141917.1\|3499820_3500489_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_002896384.1\|3500672_3501404_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896382.1\|3501490_3502963_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
WP_032447452.1\|3502959_3503676_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-34	36.9
WP_002896378.1\|3503754_3504882_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
WP_002896376.1\|3504923_3505412_-	DUF2593 family protein	NA	NA	NA	NA
WP_002896371.1\|3506250_3507204_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_002896370.1\|3507214_3508348_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
WP_002896368.1\|3508511_3509624_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_002896365.1\|3509972_3510452_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_009484278.1\|3510540_3511443_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	7.7e-34	34.9
WP_004141950.1\|3511557_3512280_-	nitroreductase NfsA	NA	NA	NA	NA
WP_008805812.1\|3512263_3512551_-	YbjC family protein	NA	NA	NA	NA
WP_002896352.1\|3512753_3513017_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
WP_002896351.1\|3513023_3513407_-	membrane protein	NA	NA	NA	NA
WP_004179131.1\|3513673_3515359_+	transporter	NA	NA	NA	NA
3515559:3515579	attL	NA	NA	NA	NA
WP_004223962.1\|3515580_3515799_-	hypothetical protein	Q53ZE7	Salmonella_virus	8.3e-19	66.2
WP_085855784.1\|3515885_3516983_-	phage late control D family protein	E5G6Q3	Salmonella_phage	1.3e-168	82.0
WP_004223957.1\|3516979_3517465_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.0e-64	77.6
WP_004223954.1\|3517461_3520092_-\|tail	phage tail tape measure protein	A0A2H4JGB2	uncultured_Caudovirales_phage	6.8e-115	38.9
WP_002896220.1\|3520084_3520204_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004223950.1\|3520218_3520518_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.4e-32	77.0
WP_004150986.1\|3520570_3521086_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004223947.1\|3521095_3522268_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.4e-205	90.8
WP_032458718.1\|3522406_3523567_-\|tail	phage tail protein	S4TP62	Salmonella_phage	1.2e-44	50.0
WP_004223943.1\|3523644_3523920_-	hypothetical protein	NA	NA	NA	NA
WP_004223940.1\|3523933_3526159_-	hypothetical protein	K4I5E8	Salmonella_phage	3.0e-10	41.3
WP_004223933.1\|3526164_3526761_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-55	56.0
WP_004223930.1\|3526753_3527662_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	3.4e-106	66.9
WP_004174325.1\|3527648_3528011_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.9e-49	84.7
WP_004223927.1\|3528007_3528580_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	2.1e-77	72.3
WP_014599113.1\|3528683_3529346_+	hypothetical protein	NA	NA	NA	NA
WP_004223923.1\|3529358_3529811_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	6.5e-50	71.4
WP_004223921.1\|3529803_3530235_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_004223918.1\|3530330_3530759_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	5.6e-51	77.9
WP_004223915.1\|3530763_3531273_-	lysozyme	E5G6N1	Salmonella_phage	9.5e-82	83.4
WP_004223911.1\|3531253_3531469_-	hypothetical protein	E5G6N0	Salmonella_phage	1.5e-28	85.9
WP_002896155.1\|3531472_3531676_-\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_004223908.1\|3531675_3532140_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.7e-74	84.4
WP_004174300.1\|3532236_3532887_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	9.6e-103	86.6
WP_004223906.1\|3532890_3533943_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.1e-171	89.1
WP_004223903.1\|3533959_3534793_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.2e-99	74.4
WP_032448015.1\|3534932_3536696_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	92.6
WP_004223897.1\|3536695_3537724_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	6.2e-173	90.3
WP_032448014.1\|3537770_3539435_-	hypothetical protein	X2KLG0	Campylobacter_phage	4.5e-11	24.9
WP_004152765.1\|3539991_3541476_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004223883.1\|3544341_3544569_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	7.8e-28	80.0
WP_004223882.1\|3544568_3544805_-	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	8.2e-12	55.4
WP_004223879.1\|3544872_3545214_-	hypothetical protein	E5G6L5	Salmonella_phage	1.3e-45	80.5
WP_004223870.1\|3545177_3545378_-	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	1.2e-24	80.3
WP_004223868.1\|3545385_3545895_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.4e-72	82.1
WP_004223867.1\|3545927_3546149_-	hypothetical protein	NA	NA	NA	NA
WP_004223865.1\|3546274_3546835_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	2.0e-40	44.8
WP_004223864.1\|3546846_3547431_+	hypothetical protein	NA	NA	NA	NA
WP_004223862.1\|3547441_3548515_+	hypothetical protein	Q6SE88	Lactobacillus_prophage	1.1e-68	40.0
WP_004223857.1\|3548492_3548864_+	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	6.2e-30	52.4
WP_004223856.1\|3548943_3549969_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	5.2e-103	55.8
3550707:3550727	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4020527 : 4027490

Moraxella_phage(16.67%)

integrase,tRNA

attL 4022034:4022048|attR 4024529:4024543

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004177036.1\|4020527_4021337_-	hypothetical protein	A0A0R6PJV6	Moraxella_phage	3.5e-30	56.8
WP_004177037.1\|4021350_4021782_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	8.2e-26	49.6
WP_029602956.1\|4021781_4021994_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	3.2e-07	47.2
4022034:4022048	attL	NA	NA	NA	NA
WP_004177038.1\|4022105_4023038_-	hypothetical protein	NA	NA	NA	NA
WP_117071181.1\|4023182_4024397_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.1e-127	53.6
WP_004143017.1\|4024978_4025845_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
4024529:4024543	attR	NA	NA	NA	NA
WP_004143016.1\|4025846_4026059_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004191607.1\|4026104_4027490_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045662

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045661

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection