CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP045090	Burkholderia glumae strain GX plasmid pWSGX2, complete sequence	0 crisprs	csa3	0	1
NZ_CP045088	Burkholderia glumae strain GX chromosome 2, complete sequence	0 crisprs	cas3,csa3,DinG	0	5
NZ_CP045091	Burkholderia glumae strain GX plasmid pWSGX3, complete sequence	0 crisprs	cas5f	0	0
NZ_CP045087	Burkholderia glumae strain GX chromosome 1, complete sequence	3 crisprs	DEDDh,csa3,cas3,WYL	13	13
NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	1 crisprs	NA	2	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17524 : 53706

Leptospira_phage(50.0%)

transposase,integrase

attL 14436:14452|attR 30225:30241

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
14436:14452	attL	NA	NA	NA	NA
WP_124837684.1\|17524_19360_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_012732713.1\|19444_19870_+	hypothetical protein	NA	NA	NA	NA
WP_153479207.1\|21244_21922_+	hypothetical protein	NA	NA	NA	NA
WP_012732716.1\|22068_22518_+	type II secretion system protein GspI	NA	NA	NA	NA
WP_012732718.1\|23661_25014_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_012732719.1\|25384_25795_-	Mn-containing catalase	NA	NA	NA	NA
WP_153479209.1\|26302_26746_+	response regulator	NA	NA	NA	NA
WP_153479210.1\|27031_27442_+	low affinity iron permease family protein	NA	NA	NA	NA
WP_153479211.1\|29476_31192_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.6e-10	51.9
30225:30241	attR	NA	NA	NA	NA
WP_153479212.1\|31384_31873_+	hypothetical protein	NA	NA	NA	NA
WP_153479213.1\|32524_33061_+	hypothetical protein	NA	NA	NA	NA
WP_153479214.1\|33071_33440_+	hypothetical protein	NA	NA	NA	NA
WP_012734062.1\|33455_33698_+	hypothetical protein	NA	NA	NA	NA
WP_153479215.1\|33798_34086_-	hypothetical protein	NA	NA	NA	NA
WP_153479217.1\|34098_37248_-	DNA polymerase III subunit alpha	A0A0K1Y9G6	Streptomyces_phage	8.2e-91	27.7
WP_153479218.1\|37254_38733_-	DNA polymerase Y family protein	NA	NA	NA	NA
WP_153479220.1\|38650_39370_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA
WP_153479221.1\|39896_40184_+\|transposase	transposase	NA	NA	NA	NA
WP_015875269.1\|40135_41692_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	5.9e-66	34.0
WP_012732753.1\|41723_42074_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_039203908.1\|42049_42526_-\|transposase	transposase	NA	NA	NA	NA
WP_153479222.1\|43701_43989_+	H-NS histone family protein	NA	NA	NA	NA
WP_153479223.1\|44018_44294_-	hypothetical protein	NA	NA	NA	NA
WP_153479224.1\|44414_44951_-	hypothetical protein	NA	NA	NA	NA
WP_153479225.1\|45098_45497_+	PAAR domain-containing protein	E5E3Y0	Burkholderia_phage	5.6e-13	51.1
WP_153479226.1\|45501_45999_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	4.4e-23	46.0
WP_153479227.1\|45991_46459_+	hypothetical protein	NA	NA	NA	NA
WP_051071122.1\|46346_46949_+	hypothetical protein	NA	NA	NA	NA
WP_043224898.1\|46956_47682_+	LysR family transcriptional regulator	A4PE26	Ralstonia_virus	1.2e-32	43.5
WP_153479228.1\|47718_48261_-	hypothetical protein	NA	NA	NA	NA
WP_153479230.1\|48458_48971_-	hypothetical protein	NA	NA	NA	NA
WP_153479231.1\|49086_49563_+\|transposase	transposase	NA	NA	NA	NA
WP_012732753.1\|49538_49889_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_153479232.1\|51426_51936_-\|transposase	transposase	NA	NA	NA	NA
WP_153479234.1\|52061_52337_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.6e-11	40.3
WP_153479234.1\|52912_53188_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.6e-11	40.3
WP_059531437.1\|53163_53706_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045088

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

363703 : 370891

Burkholderia_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153478377.1\|363703_364375_-	transglycosylase SLT domain-containing protein	B5TA73	Burkholderia_phage	1.3e-97	77.6
WP_015878156.1\|364371_364746_-	membrane protein	B5TA74	Burkholderia_phage	1.0e-56	89.5
WP_085962346.1\|364998_365816_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153478379.1\|366465_367282_+\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA
WP_080569416.1\|367311_367845_-	hypothetical protein	B5TA76	Burkholderia_phage	9.6e-85	91.5
WP_015878157.1\|367899_368370_-	helix-turn-helix transcriptional regulator	B5TA77	Burkholderia_phage	7.2e-68	87.2
WP_015878158.1\|368451_368643_+	DNA-binding protein	B5TA78	Burkholderia_phage	1.5e-27	95.2
WP_015878173.1\|369934_370891_+	hypothetical protein	A4JWL8	Burkholderia_virus	5.5e-22	35.4

DBSCAN-SWA_2

587281 : 654315

uncultured_Caudovirales_phage(40.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153477537.1\|587281_588097_+\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA
WP_153478435.1\|588022_589513_-	hypothetical protein	NA	NA	NA	NA
WP_127913912.1\|590134_591097_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153478436.1\|591918_593562_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_012733002.1\|593878_594829_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_153478437.1\|594926_596519_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_153478439.1\|596540_599219_+	DUF2309 family protein	NA	NA	NA	NA
WP_012733005.1\|599700_600510_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_012733006.1\|600617_601157_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_017423252.1\|601249_602206_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012733008.1\|602413_603343_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_012733009.1\|603339_604815_+	AMP-binding protein	NA	NA	NA	NA
WP_012733010.1\|604828_605455_+	hypothetical protein	NA	NA	NA	NA
WP_153478441.1\|605512_606703_+	Bcr/CflA family efflux MFS transporter	NA	NA	NA	NA
WP_017423253.1\|606699_607134_+	hypothetical protein	NA	NA	NA	NA
WP_153478443.1\|607293_608397_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_153478444.1\|608393_611480_+	MMPL family transporter	S5VTK5	Leptospira_phage	9.0e-50	21.6
WP_012733015.1\|611476_613063_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_012733016.1\|613302_613824_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_153478445.1\|613966_614716_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_017923693.1\|615204_615978_+	FCD domain-containing protein	NA	NA	NA	NA
WP_017423258.1\|615974_617138_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA
WP_012733020.1\|617134_618859_+	ubiquinone-dependent pyruvate dehydrogenase	E5ERI2	Ostreococcus_lucimarinus_virus	4.0e-15	24.5
WP_012733021.1\|619959_620508_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_017423261.1\|620603_621383_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_012733023.1\|621451_624268_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_012733024.1\|624368_624905_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_012733025.1\|624923_625682_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_012733026.1\|625678_627388_+	OmpA family protein	NA	NA	NA	NA
WP_012733027.1\|627594_628128_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_012733028.1\|628205_629708_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_153478447.1\|630011_630827_+\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA
WP_012733030.1\|631386_631941_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_012733031.1\|631937_633287_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_100556304.1\|633283_634600_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_035979585.1\|634612_638710_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_153478449.1\|638727_640785_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.3e-31	25.2
WP_153478451.1\|640927_643504_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.9e-34	24.8
WP_012733036.1\|643582_643846_+	membrane protein	NA	NA	NA	NA
WP_035978578.1\|643930_647341_+	RHS repeat protein	NA	NA	NA	NA
WP_012733038.1\|647245_648646_-	hypothetical protein	A0A292GJ55	Xanthomonas_phage	1.6e-110	45.7
WP_012733039.1\|648691_649699_-	fimbrial protein	NA	NA	NA	NA
WP_012733040.1\|649764_650829_-	type VI secretion protein ImpA	NA	NA	NA	NA
WP_012733041.1\|650847_651918_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_012733042.1\|651914_653795_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_012733043.1\|653796_654315_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_3

1226698 : 1276869

uncultured_Caudovirales_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085962356.1\|1226698_1227516_-\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA
WP_153478630.1\|1227590_1229036_+	hypothetical protein	NA	NA	NA	NA
WP_012733479.1\|1229173_1229605_+	hypothetical protein	NA	NA	NA	NA
WP_012733480.1\|1230028_1231108_-	porin	NA	NA	NA	NA
WP_153478631.1\|1231217_1232504_-	MFS transporter	NA	NA	NA	NA
WP_017424350.1\|1232858_1233332_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_153478633.1\|1233385_1235545_-	CoA-binding protein	NA	NA	NA	NA
WP_012733484.1\|1235563_1236397_-	p-hydroxycinnamoyl CoA hydratase/lyase	NA	NA	NA	NA
WP_012733485.1\|1236468_1237941_-	benzaldehyde dehydrogenase	NA	NA	NA	NA
WP_153478635.1\|1237978_1238746_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_153479126.1\|1239437_1239704_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_012733489.1\|1242898_1245577_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.2e-51	26.2
WP_124837821.1\|1245573_1247304_+	hypothetical protein	NA	NA	NA	NA
WP_153478637.1\|1247384_1248254_+	hypothetical protein	NA	NA	NA	NA
WP_012732753.1\|1250429_1250780_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012734051.1\|1250755_1251232_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_012733493.1\|1251717_1252173_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_153478639.1\|1252499_1252868_-	hypothetical protein	NA	NA	NA	NA
WP_017424803.1\|1252901_1253651_+	FkbM family methyltransferase	E3SJ86	Synechococcus_phage	9.6e-22	31.4
WP_153478641.1\|1253651_1254698_+	phosphotransferase	NA	NA	NA	NA
WP_012733496.1\|1254699_1255569_+	4Fe-4S cluster-binding domain-containing protein	NA	NA	NA	NA
WP_153478642.1\|1255565_1256633_+	asparagine synthase	NA	NA	NA	NA
WP_017923321.1\|1256650_1257865_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_012733499.1\|1257821_1258511_-	cephalosporin hydroxylase	NA	NA	NA	NA
WP_153478644.1\|1258537_1259515_+	phosphotransferase	NA	NA	NA	NA
WP_017425138.1\|1259530_1260106_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_124837742.1\|1261304_1262084_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_012733503.1\|1262138_1262597_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_153478646.1\|1262677_1263052_-	hypothetical protein	NA	NA	NA	NA
WP_085962421.1\|1263071_1263876_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_012733504.1\|1264248_1265412_+	serine hydrolase	NA	NA	NA	NA
WP_012733505.1\|1265463_1266159_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_012733506.1\|1266177_1267254_-	DUF3419 family protein	NA	NA	NA	NA
WP_012733507.1\|1267262_1267994_-	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_153478648.1\|1268018_1268836_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_012733508.1\|1268923_1269607_-	hypothetical protein	NA	NA	NA	NA
WP_012733509.1\|1269610_1270003_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_153478650.1\|1270600_1271026_+	hypothetical protein	NA	NA	NA	NA
WP_012733510.1\|1271137_1272160_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_153478652.1\|1272355_1272580_-	DUF4260 family protein	NA	NA	NA	NA
WP_124837732.1\|1273329_1274566_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.8e-102	63.9
WP_153478654.1\|1274625_1275051_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_085962421.1\|1275103_1275909_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153478656.1\|1276052_1276869_+\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1503819 : 1511971

Burkholderia_phage(77.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035983169.1\|1503819_1504428_+	hypothetical protein	A0A0P0IKS1	Acinetobacter_phage	2.5e-12	31.6
WP_017922206.1\|1504424_1504733_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	6.7e-14	42.6
WP_153477537.1\|1504741_1505558_-\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA
WP_035976925.1\|1505938_1506904_+	hypothetical protein	A9YX04	Burkholderia_phage	7.6e-88	54.1
WP_153478723.1\|1506940_1507144_-	hypothetical protein	NA	NA	NA	NA
WP_035976924.1\|1507142_1507928_+	phage protein	A9YX06	Burkholderia_phage	9.6e-73	55.9
WP_017922209.1\|1507986_1508340_+	hypothetical protein	A9YX11	Burkholderia_phage	2.4e-39	69.2
WP_153478724.1\|1508336_1509533_+	hypothetical protein	A9YX12	Burkholderia_phage	3.3e-141	69.1
WP_035978482.1\|1509537_1510200_+	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	5.7e-95	75.9
WP_035978485.1\|1511073_1511778_+	hypothetical protein	A9YX14	Burkholderia_phage	9.2e-67	61.8
WP_035978483.1\|1511788_1511971_+	hypothetical protein	A9YX15	Burkholderia_phage	3.5e-10	48.3

DBSCAN-SWA_5

2428981 : 2442287

Acidithiobacillus_phage(50.0%)

transposase,integrase

attL 2418084:2418099|attR 2440483:2440498

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2418084:2418099	attL	NA	NA	NA	NA
WP_153479034.1\|2428981_2429798_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_127913895.1\|2431008_2431563_-	hypothetical protein	NA	NA	NA	NA
WP_088499505.1\|2431738_2432976_-\|transposase	IS3-like element IS1416 family transposase	Q8W6R2	Burkholderia_virus	1.9e-155	94.7
WP_153479036.1\|2434655_2435018_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_012732738.1\|2435208_2436228_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153477359.1\|2436703_2438254_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.5e-157	55.2
WP_006400877.1\|2438269_2439019_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.8e-81	61.2
WP_153479038.1\|2439157_2440018_+	hypothetical protein	NA	NA	NA	NA
WP_012732752.1\|2440730_2442287_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	4.1e-67	34.0
2440483:2440498	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP045087

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045087_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045087_1

1943019-1943349

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTACACGGCAG	PILER-CR
TTTCTAAGCTGCCTACACGGCAG	CRISPRCasFinder
TTTCTAAGCTGCCTACNCGGCAGNNAAC	CRT

5 spacers

The CRISPR arrays of NZ_CP045087_1

>merge|NZ_CP045087|1|1943019-1943349|PILER-CR,CRISPRCasFinder,CRT
TTTCTAAGCTGCCTACACGGCAGCGAATCTACCGGCGCGAACTGGAGCGCCTGCTGCTCTTTTCTAAGCTGCCTACACGGCAGCGAACCACGAGCGCACACGGCACCGGCCAGTGCGTGCATTTCTAAGCTGCCTACACGGCAGCGAACGCGCTTCAACAGGATTCTCTGACGTCGCCCTGATTTCTAAGCTGCCTACACGGCAGCGAACCTCGAACGGGGACGCGGCATGACTTACCGCGAGTTTCTAAGCTGCCTACCCGGCAGATAACCGCGTCATGCGAAACGGATACGTCGAGATCCCTTTCTAAGCTGCCTACCCGGCAGATAAC

>NZ_CP045087|1|1|1943019-1943344|PILER-CR
TTTCTAAGCTGCCTACACGGCAG	CGAATCTACCGGCGCGAACTGGAGCGCCTGCTGCTCT
TTTCTAAGCTGCCTACACGGCAG	CGAACCACGAGCGCACACGGCACCGGCCAGTGCGTGCA
TTTCTAAGCTGCCTACACGGCAG	CGAACGCGCTTCAACAGGATTCTCTGACGTCGCCCTGA
TTTCTAAGCTGCCTACACGGCAG	CGAACCTCGAACGGGGACGCGGCATGACTTACCGCGAG
TTTCTAAGCTGCCTACCCGGCAG	ATAACCGCGTCATGCGAAACGGATACGTCGAGATCCC
TTTCTAAGCTGCCTACCCGGCAG

>NZ_CP045087|1|1|1943019-1943344|CRISPRCasFinder
TTTCTAAGCTGCCTACACGGCAG	CGAATCTACCGGCGCGAACTGGAGCGCCTGCTGCTCT
TTTCTAAGCTGCCTACACGGCAG	CGAACCACGAGCGCACACGGCACCGGCCAGTGCGTGCA
TTTCTAAGCTGCCTACACGGCAG	CGAACGCGCTTCAACAGGATTCTCTGACGTCGCCCTGA
TTTCTAAGCTGCCTACACGGCAG	CGAACCTCGAACGGGGACGCGGCATGACTTACCGCGAG
TTTCTAAGCTGCCTACCCGGCAG	ATAACCGCGTCATGCGAAACGGATACGTCGAGATCCC
TTTCTAAGCTGCCTACCCGGCAG

>NZ_CP045087|1|1|1943019-1943349|CRT
TTTCTAAGCTGCCTACACGGCAGCGAAT	CTACCGGCGCGAACTGGAGCGCCTGCTGCTCT
TTTCTAAGCTGCCTACACGGCAGCGAAC	CACGAGCGCACACGGCACCGGCCAGTGCGTGCA
TTTCTAAGCTGCCTACACGGCAGCGAAC	GCGCTTCAACAGGATTCTCTGACGTCGCCCTGA
TTTCTAAGCTGCCTACACGGCAGCGAAC	CTCGAACGGGGACGCGGCATGACTTACCGCGAG
TTTCTAAGCTGCCTACCCGGCAGATAAC	CGCGTCATGCGAAACGGATACGTCGAGATCCC
TTTCTAAGCTGCCTACCCGGCAGATAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045087.1\|WP_015875836.1\|1937836_1938589_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|366523
NZ_CP045087.1\|WP_015875840.1\|1944721_1945150_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_015875833.1\|1936126_1936441_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_015875837.1\|1940059_1940272_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP045087.1\|WP_015875842.1\|1946818_1947364_-\|DUF3005-domain-containing-protein	unknown	unknown	gnl\|CDD\|378664
NZ_CP045087.1\|WP_015875841.1\|1945281_1946505_-\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP045087.1\|WP_035977271.1\|1941298_1941493_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP045087.1\|WP_015875844.1\|1948417_1948846_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341390
NZ_CP045087.1\|WP_153477615.1\|1940824_1941223_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_153477613.1\|1939548_1939926_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180411
NZ_CP045087.1\|WP_015875845.1\|1948874_1949096_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_085962356.1\|1941494_1942312_-\|IS5-like-element-ISBugl2-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP045087.1\|WP_015875847.1\|1951459_1951654_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_015875838.1\|1940364_1940631_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|237102
NZ_CP045087.1\|WP_015875839.1\|1943594_1944095_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_015875843.1\|1947747_1948299_-\|membrane-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_015875846.1\|1949293_1951429_-\|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl\|CDD\|274561
NZ_CP045087.1\|WP_015875835.1\|1937574_1937844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_017433026.1\|1944137_1944701_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_015875834.1\|1936527_1937472_-\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311

Protein	Function_ID	Function_description	E-value
NZ_CP045087.1\|WP_015875836.1\|1937836_1938589_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|366523	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease.	3.78211e-46
NZ_CP045087.1\|WP_085962356.1\|1941494_1942312_-\|IS5-like-element-ISBugl2-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	4.93866e-26
NZ_CP045087.1\|WP_015875834.1\|1936527_1937472_-\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.34361e-91
NZ_CP045087.1\|WP_015875838.1\|1940364_1940631_-\|translation-initiation-factor-IF-1	gnl\|CDD\|237102	PRK12442, PRK12442, translation initiation factor IF-1; Reviewed.	1.37457e-49
NZ_CP045087.1\|WP_015875837.1\|1940059_1940272_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.00514e-12
NZ_CP045087.1\|WP_015875842.1\|1946818_1947364_-\|DUF3005-domain-containing-protein	gnl\|CDD\|378664	pfam11448, DUF3005, Protein of unknown function (DUF3005). This is a bacterial family of uncharacterized proteins.	6.09007e-48
NZ_CP045087.1\|WP_015875846.1\|1949293_1951429_-\|phospholipase-C,-phosphocholine-specific	gnl\|CDD\|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	0
NZ_CP045087.1\|WP_015875841.1\|1945281_1946505_-\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	1.2238e-56
NZ_CP045087.1\|WP_035977271.1\|1941298_1941493_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	3.24863e-32
NZ_CP045087.1\|WP_015875844.1\|1948417_1948846_+\|CBS-domain-containing-protein	gnl\|CDD\|341390	cd04622, CBS_pair_HRP1_like, CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds. Mycobacterium tuberculosis adapts to cellular stresses by upregulation of the dormancy survival regulon. Hypoxic response protein 1 (HRP1) is encoded by one of the most strongly upregulated genes in the dormancy survival regulon. HRP1 is a 'CBS-domain-only protein; however unlike other CBS containing proteins it does not appear to bind AMP. The biological function of the protein remains unclear, but is thought to contribute to the modulation of the host immune response. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.44021e-44
NZ_CP045087.1\|WP_153477613.1\|1939548_1939926_+\|SDR-family-oxidoreductase	gnl\|CDD\|180411	PRK06123, PRK06123, SDR family oxidoreductase.	2.58823e-13

>NZ_CP045087.1|WP_085962356.1|1941494_1942312_-|IS5-like-element-ISBugl2-family-transposase
MEAPIIDDELWILIEPLLPPAKLRAKSDPGRPRVSDRAALNGILFVFKTGIRWNHLPTRLGFGSGATCWRRLSDWQKAGVWDQLHELLLDKLRAAGQIDLSYAAVDSSSVRAVGAGGKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHEAFLKLGCSIICWNIFRRAEQGF
>NZ_CP045087.1|WP_035977271.1|1941298_1941493_-|cold-shock-protein
MASKWFNDSKGFGFITPDNGGEDLFAHFSEVSGDGFKTLAENQKVSFETKRGPKGMQAANIKPL
>NZ_CP045087.1|WP_153477615.1|1940824_1941223_-|hypothetical-protein
MHSILAAPASDSPGATYLSSIIFLWLQRHFLAFRCGGFSPQAPRSDRFFAPRHGTRPHASTCSSNTKIKWHNEQNQRCNGYAVHPTSHRSPDGSFSSNLQIEGVAGRYEFYSLDYFSSEAQALQHSARWARD
>NZ_CP045087.1|WP_015875838.1|1940364_1940631_-|translation-initiation-factor-IF-1
MAKEELLELDGIVDEVLPDSRYRVTLDNGVVVGAYASGRMRKNRIRILAGDRVTLELSVYDLTKGRINFRHKDERSGGAAPRASFRRR
>NZ_CP045087.1|WP_015875837.1|1940059_1940272_-|30S-ribosomal-protein-S21
MATIILKPDEPVEVALRRFRRGIERTGLIPELRARAAYEKPTAERKRKKAAAVARLNKQIKRSLPPKKRY
>NZ_CP045087.1|WP_153477613.1|1939548_1939926_+|SDR-family-oxidoreductase
MRADSAAPQQVAVLYAAISREFGRIDVLVNNAAIIARQSRLEDLGFERMQRVFAVNAIGPCSARSRRTGRGRQPEEVARAILWLASAKASFVTGTFLDATGESEGWGCKRHKSRPDLTVTRSDAA
>NZ_CP045087.1|WP_015875836.1|1937836_1938589_-|DNA/RNA-non-specific-endonuclease
MTMKWLAALGLLSIAASIHAAPCSQFSPAGLEPELTNPKMVRQARLLCYSDFAVLHSGITHTPLWSAEHLTAAHLADARDEVRTNRFFAETRLPAGEGATLADYRRSGFDRGHMSPAGDRWNDVAMAESFSLANMIPQNPQNNRRLWARVEEAVRAMAMRDGEAYVVTGPMFHGSELQTIGASRVIVPTEIFKLVYLPARRVAFAIVVKNADVKRYDIETVHQLEAASGLRFPGVPERLKDMKVGGLSGV
>NZ_CP045087.1|WP_015875835.1|1937574_1937844_-|hypothetical-protein
MSKTNFPAFADDSTVVNLAGDALTISNDPSRIRVSGELEIARDQAGLKRAQALLAVFASIVEALEAVPDLPAKLADEPPAPTGRIANPF
>NZ_CP045087.1|WP_015875834.1|1936527_1937472_-|GlxA-family-transcriptional-regulator
MHRIGYLLSDGFQIMALASQTVFEVANLVAGTPFYAVENYSIAGGPQRSSLGMRVETRAPAPRGGVDSWLVVGVIDPLAVPPPDDLVAFLRRSSGRARRVAGICTGGFVLAEAGLLDGRRATTHWAFARALRQAHPAVRMEDDRIYIVDGPVWTSAGMTAGLDLALAMVEQDLGADLARSVAHKLVMHQRRAGGQSQHSEMLELAPKSDRIQNALNYARQNLHRSLSVEELATAAHLSPRQFSRVFTLETGQSPARAVEGLRLEAARLMVERGTHPLEVIARETGFRDRRHLREAFVRGFGVPPQAVRREARGG
>NZ_CP045087.1|WP_015875833.1|1936126_1936441_+|hypothetical-protein
MQLRELAHSRTGDKGNTLNVSVICRDPRHYAHVREHLSAARVKAWLGAFVRGEVVRHELPALAAFNFVLGEALGGGVTRSLALDAHGKSVSSALLAIEVPAPPD
>NZ_CP045087.1|WP_015875839.1|1943594_1944095_+|hypothetical-protein
MTDHATDTDPAQDDSPIHEDGLWHDSGWTARVIKNEDDDGWAVAMIKDGEAEPALVGPWTMGRDKKNPKPLDAAAFRTLVKTASEVLRRHEQQREAMLHKEVTVHVEARAVSVTLDIVPDDDEPYAVLKAFDETGEQLGQATVQAGFRLDKASATRWVTRDFERPD
>NZ_CP045087.1|WP_017433026.1|1944137_1944701_-|hypothetical-protein
MAAVLGGVVLACAAPAGHAAAKADPHALIEQLVQCRASFDDLVSFNDRVDAHAVGFPEAKPMPGTSGPVWTVKPAVSALGVSSDTVLLNSRSSVFVVVASPHAADDVLALGQREGLGVELKMGGYAVVRKDLDQRAARAFNIDGGHYAAGCVYDEPAFDAARAARYNATPQRRAEKKALEKALQQAQ
>NZ_CP045087.1|WP_015875840.1|1944721_1945150_-|hypothetical-protein
MIQQAVRLASAGVALAASAALLSPVAHAAGPAVKKVKLLELYSRYAHDGQSVTGLPEYGDGKRILFTAVVVEQSQGLVGNTLLVAADPSQPDEPLARLTGYDEKEARKMAALPAGAKFSAICALALTSGSDFLALHDCVVKP
>NZ_CP045087.1|WP_015875841.1|1945281_1946505_-|YeeE/YedE-family-protein
MSTLPSSPARAPRALGAINPKSLGFALLLVVLGAVYLARAVSLRQAALYLVGALLGMTLYHAAFGFTSAWRVFIADRRGAGLRAQMLMLAIGVLLFFPALSGGTLFGHPVTGLVSPAGTSVVVGAFLFGLGMQLGGGCASGTLYTVGGGSTRMIVTLLAFVAGSVVATAHMPFWTSMPQWKPVSLVHAFGVLPALALSLAVFAAIAALTVVIETRRHGGLVREARAPHTSPWLHGPWPLLAGAVALALLNFATLALSGRPWGVTSAFALWGAKGFAALGIDVASWKYWTAGPNAAALAAPASHDVTTVMDIGIVLGAMAAASLAGRYAPVWRVPLRSLLAAVAGGLLLGYGARLAYGCNIGAYFSGIVSGSLHGWLWLVCAFAGNVLGTRLRPWFGLEVERVKPSGC
>NZ_CP045087.1|WP_015875842.1|1946818_1947364_-|DUF3005-domain-containing-protein
MNQPVKSNPYPQQQHEKAGQSPVKTPAAGKDQPDAGTQAAGFASRQTPETIAGKTPTGLPPIERGDRGAQHGDPVRRAAERITSLDNANMAATDNAVDVDGKGLEARREASPRQDNVIHSNASLDEATRPPAEGLGGIDSQPPSEVLARPGWRVENRGTVTVEHTNGERAERVFSFERSSH
>NZ_CP045087.1|WP_015875843.1|1947747_1948299_-|membrane-protein
MTMIVTGNFQTFADAEASRRRLMDQRFRRDDVSIFFLNPHGQHGRFPIGGDVYADTAAKPGGRGAIAGTVRGVSIGLLLGLLVYAIGHTPWWVPVATTLLGAYLGAFSGALARMRGRAEEGTGALSGTEHGVVLAAHVTESNATTAEEILRSTGAMSVERVDGEWRDGRWQDFDPTRRPDDRA
>NZ_CP045087.1|WP_015875844.1|1948417_1948846_+|CBS-domain-containing-protein
MIRVADVMSRDVVSIAPNDSVRHAAQCMAHYDVGALPVCDRGRLVGIVTDRDLAVRVLADDVGPDTAIGEVATRRPVCCREHDDLDAVQQRMAEARIRRTPVVTASGQLVGMLSLGDIATRAQGASQDELANTLERVSQPGQ
>NZ_CP045087.1|WP_015875845.1|1948874_1949096_-|hypothetical-protein
MMPHRFVVLEKIAFSLVVMSAVACTAFITYQRCPEDVRNMLDAGKDLLATSAAGYSIACASVDPNACIGLPTY
>NZ_CP045087.1|WP_015875846.1|1949293_1951429_-|phospholipase-C,-phosphocholine-specific
MVTQSRRDFLKFSAGLAGATAATTLVPESIRRALAIEPATVTGTIQDVQHIVVFMQENRSFDHYLGHLSGVRGYNDRFPVTLPNGKPVWFQPRQEDPSKVIAPFRYDTTNPNWNAQCIGGLPHTWVTTHSAIDHGRAGQWAAQKTNMTMGYHQREDVPFHYALADAFTVCDQYFCSIPGNTHPNRMYLMTGMVDPLATGGGPLLDNVDYIDNQFEPNQLRNPLTWTTYPERLEAAGISWQVYQQGTNFDNFTGNYGTNMLAAFQNFVNAPAGSSLQQRGMSTRNIAQLKADVQAGALPQVSWLLPPAAYSEHPKYTPLYGAYYISTILDALTSNPDVWSKTVLFIMYDENDGLFDHVVPPQAPTYVSTPPVNVGASTVDISLERHTVVPPQEVGTFTADTLPYGLGPRVPMFVVSPWSKGGFVSSQVFDHTSVLQFIERRFGVTEPNISPWRRAVCGDLTSTLDFTKSDATFPSLPSTSNYVAQADLQCSRATAQTAPAASTATPSIAAQEPGTRLSRPTPYELHVNGQLTSAGYTITFASSGTQGAHFWVYTNDSTALPRSYTVEAGKQLSDTWALDAGSGYAIHVYGPNGYFRRFLGAASGEAAAHPDLTTCYDVANGNVYVTLANGGTQPITVTATDLAYGQAPRSLTVPAGQSLEAHWDLSCSSQWYDLQFTIPDNPSWLRRIAGRVENGRVTTTDPAATAPVTKAI
>NZ_CP045087.1|WP_015875847.1|1951459_1951654_-|hypothetical-protein
MQTPALRHLILIGMLAAAASLAACNGDDSQPVAQPATPPKAACGNVAAATVTLHCPPGFTAPKS

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Crispr_ID: NZ_CP045087_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045087_2

2758451-2758612

Orphan

Consensus_repeat	Method
CGCGAACCGCGCGAGGCACGCGAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP045087_2

>merge|NZ_CP045087|2|2758451-2758612|CRISPRCasFinder
CGCGAACCGCGTGAAAACCGCGGCGAGGCACGCGAGGGCCGCGGCAATCGCGAACCGCGCGAGGCACGCGAAGGCCGCGAGGCTCGCGAGCCGCGTGAAGTGCGCGAGCCGCGCGAACCGCGTGCAGCCCGCGAACCGCGCGAGGCACGCGAACCGCGTGAA

>NZ_CP045087|2|2|2758451-2758612|CRISPRCasFinder
CGCGAACCGCGTGAAAACCGCGGC	GAGGCACGCGAGGGCCGCGGCAAT
CGCGAACCGCGCGAGGCACGCGAA	GGCCGCGAGGCTCGCGAGCCG
CGTGAAGTGCGCGAGCCGCGCGAA	CCGCGTGCAGCCCGCGAACCG
CGCGAGGCACGCGAACCGCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045087.1\|WP_012735013.1\|2752666_2753659_-\|S49-family-peptidase	unknown	unknown	gnl\|CDD\|132934
NZ_CP045087.1\|WP_012735004.1\|2763572_2764067_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP045087.1\|WP_012735008.1\|2760108_2761221_+\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP045087.1\|WP_026051662.1\|2754746_2755751_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|182909
NZ_CP045087.1\|WP_012735015.1\|2751260_2751884_+\|septum-formation-protein-Maf	unknown	unknown	gnl\|CDD\|235009
NZ_CP045087.1\|WP_012735000.1\|2768326_2768998_-\|lactate-utilization-protein-C	unknown	unknown	gnl\|CDD\|224473
NZ_CP045087.1\|WP_012735002.1\|2765635_2766625_-\|D-glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240626
NZ_CP045087.1\|WP_012735007.1\|2761236_2761878_+\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP045087.1\|WP_012735017.1\|2750051_2750231_-\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|234901
NZ_CP045087.1\|WP_012735019.1\|2747818_2748808_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_CP045087.1\|WP_012735018.1\|2748808_2749915_-\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP045087.1\|WP_012735006.1\|2761996_2763262_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP045087.1\|WP_012734999.1\|2769104_2770304_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP045087.1\|WP_012735012.1\|2753701_2754085_-\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|225057
NZ_CP045087.1\|WP_012735001.1\|2766722_2768330_-\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|379910
NZ_CP045087.1\|WP_012735011.1\|2754081_2754741_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319835
NZ_CP045087.1\|WP_012735005.1\|2763300_2763576_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_012735003.1\|2764169_2765639_-\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|224241
NZ_CP045087.1\|WP_012735016.1\|2750331_2750976_-\|DUF177-domain-containing-protein	unknown	unknown	gnl\|CDD\|376863
NZ_CP045087.1\|WP_012735014.1\|2751880_2752603_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|381176

Protein	Function_ID	Function_description	E-value
NZ_CP045087.1\|WP_012735013.1\|2752666_2753659_-\|S49-family-peptidase	gnl\|CDD\|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	3.69309e-82
NZ_CP045087.1\|WP_012735004.1\|2763572_2764067_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.21661e-19
NZ_CP045087.1\|WP_012735008.1\|2760108_2761221_+\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	5.27583e-170
NZ_CP045087.1\|WP_026051662.1\|2754746_2755751_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|182909	PRK11025, PRK11025, 23S rRNA pseudouridine(955/2504/2580) synthase RluC.	9.43726e-127
NZ_CP045087.1\|WP_012735015.1\|2751260_2751884_+\|septum-formation-protein-Maf	gnl\|CDD\|235009	PRK02141, PRK02141, Maf-like protein; Reviewed.	8.25964e-122
NZ_CP045087.1\|WP_012735000.1\|2768326_2768998_-\|lactate-utilization-protein-C	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	4.58062e-39
NZ_CP045087.1\|WP_012735002.1\|2765635_2766625_-\|D-glycerate-dehydrogenase	gnl\|CDD\|240626	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH). D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.20366e-153
NZ_CP045087.1\|WP_012735007.1\|2761236_2761878_+\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	4.01093e-88
NZ_CP045087.1\|WP_012735017.1\|2750051_2750231_-\|50S-ribosomal-protein-L32	gnl\|CDD\|234901	PRK01110, rpmF, 50S ribosomal protein L32; Validated.	2.20282e-23
NZ_CP045087.1\|WP_012735019.1\|2747818_2748808_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	0
NZ_CP045087.1\|WP_012735018.1\|2748808_2749915_-\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	0
NZ_CP045087.1\|WP_012735006.1\|2761996_2763262_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.54232e-154
NZ_CP045087.1\|WP_012734999.1\|2769104_2770304_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP045087.1\|WP_012735012.1\|2753701_2754085_-\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|225057	COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only].	4.99159e-15
NZ_CP045087.1\|WP_012735011.1\|2754081_2754741_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319835	cd07533, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar to Parvibaculum lavamentivorans HAD-superfamily hydrolase, subfamily IA, variant 1. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.80322e-71
NZ_CP045087.1\|WP_012735001.1\|2766722_2768330_-\|sodium:proton-antiporter	gnl\|CDD\|379910	pfam16980, CitMHS_2, Putative citrate transport. CitMHS is a family of putative citrate transporters, belonging to the Na+/H+ antiporter NhaD-like permease superfamily.	0
NZ_CP045087.1\|WP_012735003.1\|2764169_2765639_-\|DNA-recombination-protein-RmuC	gnl\|CDD\|224241	COG1322, COG1322, Predicted nuclease of restriction endonuclease-like fold, RmuC family [General function prediction only].	3.11988e-101
NZ_CP045087.1\|WP_012735016.1\|2750331_2750976_-\|DUF177-domain-containing-protein	gnl\|CDD\|376863	pfam02620, DUF177, Uncharacterized ACR, COG1399. This family is nearly universally conserved in bacteria and plants except the Chlorophyceae algae. Thus far, mutantional analysis in bacteria have not established a function. In contrast, mutants have embryo lethal phenotypes in maize and Arabidopsis. In maize, the mutant embryos arrest at an early transition stage.It has been suggested that family members specifically affect 23S rRNA accumulation in plastids as well as bacteria.	1.40293e-22
NZ_CP045087.1\|WP_012735014.1\|2751880_2752603_+\|SAM-dependent-methyltransferase	gnl\|CDD\|381176	cd11649, RsmI_like, uncharacterized subfamily of the tetrapyrrole methylase family similar to Ribosomal RNA small subunit methyltransferase I (RsmI). RsmI, also known as rRNA (cytidine-2'-O-)-methyltransferase, is an S-AdoMet (S-adenosyl-L-methionine or SAM)-dependent methyltransferase responsible for the 2'-O-methylation of cytidine 1402 (C1402) at the P site of bacterial 16S rRNA. Another S-AdoMet-dependent methyltransferase, RsmH (not included in this family), is responsible for N4-methylation at C1402. These methylation reactions may occur at a late step during 30S assembly in the cell. The dimethyl modification is believed to be conserved in bacteria, may play a role in fine-tuning the shape and functions of the P-site to increase the translation fidelity, and has been shown for Staphylococcus aureus, to contribute to virulence in host animals by conferring resistance to oxidative stress.	4.49638e-132

>NZ_CP045087.1|WP_026051662.1|2754746_2755751_-|RluA-family-pseudouridine-synthase
MNELGKISQKSVASGQVSMVEVGEDAAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNKGRIDAQYRLAFGDVVRIPPIRVAAADPAREAAPVPAVEFEILFEDEALIAINKPAGVAVHGGSGVSFGVIEQMRAARPNAKFLELVHRLDRETSGILMLAKKRSALVALHEQIRENRMDKRYYACAHGDWAADWGRRRAVKVPLFKYSTAEGERRVRVQDDGLPSHTVFNLIERWPDYALVEAELKTGRTHQIRVHLAHLGLPIAGDAKYGDFALNKALARANARPSLKRMFLHAYRLKLAHPLSGEPLQFDAPLPDECRRFLDQLNELRAPAA
>NZ_CP045087.1|WP_012735011.1|2754081_2754741_-|HAD-IA-family-hydrolase
MARQQFDLIVFDWDGTLMDSTAHIARSIQAACRDLGLPTPSDEASRYVIGLGLRDALAIAAPTLEPSEYARLAERYRFHYLVKDPRVELFAGVRELLEELRDTGYLLAVATGKGRVGLNRALDETKLTRFFDGTRCADETFSKPHPAMLHELSRELGQDLARTVMIGDTTHDLQMAASAGAAGIGVAYGAHSAESLAALAPRFIAADVSALADWLRQHA
>NZ_CP045087.1|WP_012735012.1|2753701_2754085_-|Rieske-2Fe-2S-domain-containing-protein
MSDEAVFVCASDALVDGGLGVRQTARLRGEEVVVFFVRYDGRAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGARLRAVAVDERDTPEGRAVYWLPDGELRPSAS
>NZ_CP045087.1|WP_012735013.1|2752666_2753659_-|S49-family-peptidase
MTDQPISPDSSGTARGAGHEPGWERAALERIAMAAIIEQRRARRWRIAFRFLWLIAVVAIMLAVFDFSGDGKLSSSRHTALVSIDGEIAAGNSANADDINSALDDAFDDSGTVGVVLHINSPGGSPVQAGIVYDEIRRLRKKYPSKPLYVVVSDMCASGGYYIAAAADRIYVNKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFYDPFSPETPKMDEHAQSMLDEIHAQFIQAVKDGRGKRLHDSPDIFSGLFWTGAKSVELGLADGFGTTDSVARDVLKAPDIVDYTVKESLSSRVARRFGAAIGGGAVKSALSDSAVRLR
>NZ_CP045087.1|WP_012735014.1|2751880_2752603_+|SAM-dependent-methyltransferase
MTKGTLYLIPNTLGEGDASLLAAVLPAAVQARAAALGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPAGEIERLLGPILAGADGGLVSEAGVPAVADPGALLVRRAHERGVRVVPLVGPSSILLALMASGLNGQTFAFHGYLPVDAAARAKRLRELEQQSRKTRETEIFIETPYRNQAMLEALLASCAPSTLICIAADLTLDTETIVSRSAADWKKAPPLNLQKRPAIFLLLAN
>NZ_CP045087.1|WP_012735015.1|2751260_2751884_+|septum-formation-protein-Maf
MTTFSRPPRLILASSSRYRRELLERLRIPFEVATPDLDETPRAGESPADTALRLAADKARAVAGRVAAPEGAIVIGSDQVATFDGRQIGKPGTHERALEQLKSMQGRHVEFHSALCVYDSRTGRAQVEDVVTRVRFRSLCDAELDAYLRAETPYDVAGSAKSEGLGIALLDAIDADDPTALVGLPLIALTRMLREAGVPLFGAEVRA
>NZ_CP045087.1|WP_012735016.1|2750331_2750976_-|DUF177-domain-containing-protein
MNPSSGKPAVSLDPHLVDLFEFARSARQSAGAVRLSQLPRMVNEVPADAPDHDTVFTWQAEGSTQSELQDDGSEGQQPYLRLALHGAAWLECQRCMTPYSQAFDIDMVYRIVASEEEAEAIPLDEDDEVDVIVGSRQFDLVDLIEEELLLSLPLVPKHEVCPAVHESLVSGASGPAEDAVADAEIESEGGEGGEKRPNPFAALEALKRDGDKKH
>NZ_CP045087.1|WP_012735017.1|2750051_2750231_-|50S-ribosomal-protein-L32
MAVQQNKKSPSKRGMHRSHDFLTTTPLAVEPSTGEVHLRHHISPNGYYRGKKVVKTKND
>NZ_CP045087.1|WP_012735018.1|2748808_2749915_-|phosphate-acyltransferase-PlsX
MTVKLTIDCMGGDHGPSVTVPAAVKFVRAHPDAHLMLVGIDTAIRAQLKKLKALDEPALSIVPATEVVAMDDSVEIALRRKKDSSMRVALNHVKEGAAQACVSAGNTGALMAVSRYVLKTLPGIERPAIAFALPNPTGYTMMLDLGANVDCEPQHLLQFAEMGHALVAALEGRDRPSIGLLNIGEEVIKGNDTIKRAGELLRASTLNFRGNVEGNDIYKGTVDVIVCDGFVGNVALKTSEGLAQMLADIIKEEFSRSWLTKLMAVLALPVLLRFKRRVDHRQYNGAALLGLRGLVIKSHGSADAYAFEWAIKRGYDAVKNGVLERLSRAMAENAMPLGESGHDAGGAGQAGPSAGQQAEPSSALSSKA
>NZ_CP045087.1|WP_012735019.1|2747818_2748808_-|ketoacyl-ACP-synthase-III
MAQSTLYSRVLGTGSHLPPNRVTNQALAERLAKDGIETSDEWIVARTGIHARHFADPDVTTSDLALAAAQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNGGAAFDVQAVCSGFAYALATADSFIRGGQHRTALVVGAETFSRILDFKDRTTCVLFGDGAGAVVLSASDEPGILGSALHADGSYSHILCTPGNVNGGVIAGSAFLHMDGQAVFKLAVNVLEKVAIEALEKANLTADQVDWLIPHQANIRIMTSTCRKLGLPQERMVVTVGEHGNTSAASIPLALDVAVRDGRIQRGQTVLIEGVGGGFTWGATAFRF
>NZ_CP045087.1|WP_012735008.1|2760108_2761221_+|GTP-3',8-cyclase-MoaA
MSQRIIPVTDVSGIPDISGTPFAPSGILRDTLARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYPFLPHSALLSLEELERVARLFVAHGVEKIRITGGEPLLRKNLEFLIERLARMQTVGGHPLDLTLTTNGSLLARKARSLRDAGLTRVTVSLDALDDALFRRMNDANFASADVLEGIFAAQDAGLAPVKVNMVVKRGTNDAEIVPMARRFKGTGIVLRFIEYMDVGTSNGWDMTDVLPSAEVLERIDAQFPLVPLEAHSAAETAQRWGYADGSGEIGLISSVTRAFCGACTRARLSTEGKLYLCLFGSSGHDLRALLRNGATDAQIATAIARIWQARDDRYSQLRGTAQAGQRADAAAPRVEMSYIGG
>NZ_CP045087.1|WP_012735007.1|2761236_2761878_+|molybdenum-cofactor-guanylyltransferase-MobA
MSMIAPAPLPGDATRQLTGLLLAGGRGSRMGGVDKGLQPLRGEPLALHVLRRLAPQVAAIVISANRNPDTYAALGRPYGARVVADATPGFAGPLAGLLAGLRAAATPLVLSAPCDTPDLPDDLAARLLAARGADRAAIAMAVSVAADGRAHPQPTFALVPVALADDLEAALAAGERRVRAWYARHTTIEVPFDDEHAFYNANSLQELTRLERD
>NZ_CP045087.1|WP_012735006.1|2761996_2763262_+|molybdopterin-molybdotransferase-MoeA
MTTPPSPETLSVEAARMLALQAIVPVAETERVALHDALGRVLADAVTSPLDVPAYDNAAMDGYAFAGAALAHAAGAELALPVAGIALAGHPHAGPLPPGACIRIMTGAPLPAGSDTVIAQERTNATDTLVRFAANAVTPGANCRRAGEDLARGAIVLEAGRIVRPADLGLLASLGIGHIEVRRRLRVACLSTGDELRAPGEPLGAGGRYDSNRATLYGMLAALGVDVLDGGIVRDDPAALEAALREAAMRADVVITSGGVSVGDADFTRGLLGRLGEIRFANLAMRPGRPLACGRFAPPEPGARAALFFGLPGNPVAVAATFQVIVRDALLAMMGARAEPAPRYPARTSAAIDTRAGRTDFLRGVASREPDGAWRVAPAGSQSSASLKGLSDANCFIVVGAGLARVEAGDSVEILPFAGAL
>NZ_CP045087.1|WP_012735005.1|2763300_2763576_+|hypothetical-protein
MKKQISSIAAGQTAKALILVYLTFSVPIVLLGIVVAFVRYGSVELSTIFSALLLNAIIGFVLLWIACHAYNWVASRFGGIEIVLSDVPEEA
>NZ_CP045087.1|WP_012735004.1|2763572_2764067_+|GNAT-family-N-acetyltransferase
MKFEIRDAAPSDVAALIALTRELAEFEALTHLFVATEADLADALFGPNPAAGALVATQEGDLIGYALYFQNYSTFVGKRGLYLEDLYVKPTCRGTGLGTRLLRAVAALAVERGCGRFEWTVLDWNRQAIEFYERMGAVVLPDWRVVRVTGDALDALAQPLRDAD
>NZ_CP045087.1|WP_012735003.1|2764169_2765639_-|DNA-recombination-protein-RmuC
MTPWLLGAVALLAAALAIALGVIWRGASHAGDGIGWLGERLDEAQDAQAQALERLERALRDEFAAGSRGARTELTGSFTQLQQMLAAQLTSVATVQNQQIDGFAQQLAKLVATHHQQFDAMRDGLHQQAQLARDEQGAALRHFGAVLSQQLAQLSEANDRRMGEVRATLEQRLKDIEANNAAKLDEMRRTVDEKLHATLEQRLGESFRLVSERLEQVHRGLGEMQTLAAGVGDLKKVLTNVKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPKSSERVEFAIRLPGRQADAQPVWLPVDAKFPREDYERLIDAQERADAAGVEEAARALEARVRAEAKTIAEKYVAPPHTTDFALLFLPTEGLYAEILRRPGLTDLLQRDYRVTVAGPTTLTALLNSLQMGFRTLAIERRSSEVWQVLGAVKTEFGKFGEVLARTKSQLETVTRSIEAAEQRTRVMNRKLKAVEALPGDDAAGLLGGAAGPAADGEDG
>NZ_CP045087.1|WP_012735002.1|2765635_2766625_-|D-glycerate-dehydrogenase
MQKILVARAIFPDVIERLRQYFDVDWNDGDALAPDALHARLADKDGALTAGDPIGAAALAAAPKLRAVANMAVGYNNFDMAAFDAANVLATNTPDVLNETTADFGWALMMAAARRIAESEHWLRAGRWQKWSFDSFLGADLHGTTLGVIGMGRIGQAIARRARGFNMRVVYHNRSRVAAGIEAELNAEYLSKEALLRQADHVVLVLPYTKESHHTIGAAELALMKPSATLTNIARGGIVDDAALAAALRERRIAAAGLDVFEGEPSVLPALLEVPNVVLTPHIASASEATRRAMANLAADNLIAALGEGPRAGRPPNPINPDVLGRARA
>NZ_CP045087.1|WP_012735001.1|2766722_2768330_-|sodium:proton-antiporter
MTAVTRRQAAFRLSVPATFSAGSTLAAPGRGRRRRAPGLPAVLAVLGALLLGGAPATASAAALDGATLSALWGIPFAGMLLSIALCPLVAPAFWHRHFGKIAAGWAGALLVPFAVAFGAAAAGATLVHALLEEYLPFIVLLTALYTVAGGICLHGALRASPARNTALLALGAVLASVMGTTGAAMLLIRPLLRANAARPRVVHVVVFFIFLVANAGGALSPLGDPPLFLGFLNGVDFFWTTIHLALPTLFVCAVLLTVFYVLDAWRFRRDGVLGRALDHDADPLDHEAGEARAVAFGPNRPGAQPAAGTRLWLEGRINFVLLAAIVALVLMSGIWKPGIEFEVAGTHVALQNLVRDLALVAVALLSLALTPRSAREGNAFDWAPIEEVAKLFAGIFVTIAPVIMILRAGAGGAFAPIVRLVTDAGGEPVVPMLFWATGLLSSFLDNAPTYLVFFNLAGGDAASLMTTGAAALAAISAGAVFMGANSYIGNAPNFMVKAIAEARGIRMPSFFGYLGWSFGILLPVFALATWLFFSA
>NZ_CP045087.1|WP_012735000.1|2768326_2768998_-|lactate-utilization-protein-C
MDTSAARRNILARIRAAQGRATEPEAQEREQAADYLARHPAGPRPPMPAEPGALAARFAEEAARMSTTVAFVETLDAVPAEAARYLREHALPPRAIAWRTLDGLDWQAAGLEVVPRKPADGDLVGITGCFCATAETGSLVLLSGPDSYASAALLPETHIVVVPVSRIVAGHEDAFALIRAERGELPRAVNLVSGPSRTGDIEQTIVLGAHGPYRVHAILVRGA
>NZ_CP045087.1|WP_012734999.1|2769104_2770304_-|nicotinate-phosphoribosyltransferase
MIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPDVDLVPYIDEIRDEVRGLCQLRFNDAELDYLRQMRFIKSDFVDFLALFHLSEKYIEISPSPKGNGEIDIAIRGPWLHTILFEIPVLAIVNEVYFRNTQSEPDYGEGRGRLREKMKLLGARPEFADCKIADYGTRRRFSKVWHEEVALTLRDGLGEQFAGTSNVYYAMRHGITPLGTMAHEYLQACQALGPRLRDSQIYGLEMWAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFEWGERMIRHYEANRCDPRTKVLVFSDALDIPKVLQLYERFRDRCKLAFGVGTNLTNDLGYRPLQIVIKMVRCNGQPVAKLSDSPGKSMCDDKAYLAYLRQVFGIAQPVEDEAGK

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Crispr_ID: NZ_CP045087_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045087_3

3262749-3263264

Orphan

Consensus_repeat	Method
CTTCTTNGCCGCGNCCTTCTTCNCNGC	CRT

9 spacers

The CRISPR arrays of NZ_CP045087_3

>merge|NZ_CP045087|3|3262749-3263264|CRT
CGTCGCAGGCGCTGCCTTCTTCGCGGCAGCCGCCTTCTTCGCCGGTGCAGCCTTCTTCGCAGCCGGTGCCTTCTTCGCCGGTGCCGGCGTCTTTGCAGCGGCCTTCTTCGCCGGTGCGGCGGCCTTCACGGCGGCCTTCTTCGCCGGCGCGGCCTTCTTCGCCGCCACCTTCTTCACGGCGACCTTCTTCGCGGCAACCTTCTTCGCAGCCGGCGCCTTCTTGGCGACAACCTTCTTCGCCGCGACCTTCTTCACCGCTGCCTTCTTGGCCGGTGCCGCCTTCTTCGCCGCGACCTTCTTCACCGCGACCTTCTTGGCGACAACCTTCTTTGCCGCGACCTTCTTCACCGCTGCCTTCTTGGCCGGTGCCGCCTTCTTCGCCGCGACCTTCTTCACCGCCGCCTTCTTGGCGACAACCTTCTTGGCCGCGACCTTCTTCACGGCAGCCTTCTTCGCCGGTGCCGCTGCCTTCTTGGCAACCGGAGCCGCCTTCTTCGCTGCTGCCTTCTTGGCAGC

>NZ_CP045087|3|2|3262749-3263264|CRT
CGTCGCAGGCGCTGCCTTCTTCGCGGC	AGCCGCCTTCTTCGCCGGTGCAGCCTT
CTTCGCAGCCGGTGCCTTCTTCGCCGG	TGCCGGCGTCTTTGCAGCGGCCTTCTTCGCCGGTGCGGC
GGCCTTCACGGCGGCCTTCTTCGCCGG	CGCGGCCTTCTTCGCCGCCAC
CTTCTTCACGGCGACCTTCTTCGCGGC	AACCTTCTTCGCAGCCGGCGCCTTCTTGGCGACAAC
CTTCTTCGCCGCGACCTTCTTCACCGC	TGCCTTCTTGGCCGGTGCCGC
CTTCTTCGCCGCGACCTTCTTCACCGC	GACCTTCTTGGCGACAAC
CTTCTTTGCCGCGACCTTCTTCACCGC	TGCCTTCTTGGCCGGTGCCGC
CTTCTTCGCCGCGACCTTCTTCACCGC	CGCCTTCTTGGCGACAAC
CTTCTTGGCCGCGACCTTCTTCACGGC	AGCCTTCTTCGCCGGTGCCGCTGCCTTCTTGGCAACCGGAGCCGC
CTTCTTCGCTGCTGCCTTCTTGGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045087.1\|WP_012734582.1\|3268768_3269350_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP045087.1\|WP_012734591.1\|3257929_3258832_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
NZ_CP045087.1\|WP_012734578.1\|3272138_3272690_+\|hypoxanthine-guanine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181675
NZ_CP045087.1\|WP_012734592.1\|3256559_3257927_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP045087.1\|WP_012734584.1\|3263719_3264943_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|235968
NZ_CP045087.1\|WP_012734577.1\|3272803_3273406_-\|MarC-family-protein	unknown	unknown	gnl\|CDD\|170674
NZ_CP045087.1\|WP_012734576.1\|3273479_3275216_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP045087.1\|WP_012734589.1\|3260366_3260870_+\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP045087.1\|WP_012734575.1\|3275435_3276068_+\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_CP045087.1\|WP_012734581.1\|3269346_3269634_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_012734595.1\|3254778_3255321_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP045087.1\|WP_012734587.1\|3261928_3262405_+\|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|225675
NZ_CP045087.1\|WP_012734574.1\|3276118_3276718_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378041
NZ_CP045087.1\|WP_012734588.1\|3260967_3261906_+\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|238917
NZ_CP045087.1\|WP_153478055.1\|3258877_3260272_+\|DUF3426-domain-containing-protein	unknown	unknown	gnl\|CDD\|378759
NZ_CP045087.1\|WP_153478057.1\|3270634_3272002_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP045087.1\|WP_012734596.1\|3254126_3254789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045087.1\|WP_012734593.1\|3256036_3256504_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_CP045087.1\|WP_012734594.1\|3255514_3255967_+\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|235443
NZ_CP045087.1\|WP_012734580.1\|3269647_3270547_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226621

Protein	Function_ID	Function_description	E-value
NZ_CP045087.1\|WP_012734582.1\|3268768_3269350_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.10589e-124
NZ_CP045087.1\|WP_012734591.1\|3257929_3258832_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	9.90351e-119
NZ_CP045087.1\|WP_012734578.1\|3272138_3272690_+\|hypoxanthine-guanine-phosphoribosyltransferase	gnl\|CDD\|181675	PRK09162, PRK09162, hypoxanthine-guanine phosphoribosyltransferase; Provisional.	5.05265e-114
NZ_CP045087.1\|WP_012734592.1\|3256559_3257927_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP045087.1\|WP_012734584.1\|3263719_3264943_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|235968	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated.	0
NZ_CP045087.1\|WP_012734577.1\|3272803_3273406_-\|MarC-family-protein	gnl\|CDD\|170674	PRK10739, PRK10739, YhgN family NAAT transporter.	1.40858e-49
NZ_CP045087.1\|WP_012734576.1\|3273479_3275216_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP045087.1\|WP_012734589.1\|3260366_3260870_+\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	7.57143e-99
NZ_CP045087.1\|WP_012734575.1\|3275435_3276068_+\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	2.42093e-96
NZ_CP045087.1\|WP_012734595.1\|3254778_3255321_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	4.14391e-41
NZ_CP045087.1\|WP_012734587.1\|3261928_3262405_+\|glycine-zipper-2TM-domain-containing-protein	gnl\|CDD\|225675	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane].	1.12023e-34
NZ_CP045087.1\|WP_012734574.1\|3276118_3276718_+\|hypothetical-protein	gnl\|CDD\|378041	pfam08750, CNP1, CNP1-like family. This family of proteins are likely to be lipoproteins. CNP1 (cryptic neisserial protein) has been expressed in E. coli and shown to be localized periplasmicly.	1.51461e-71
NZ_CP045087.1\|WP_012734588.1\|3260967_3261906_+\|carbohydrate-kinase-family-protein	gnl\|CDD\|238917	cd01942, ribokinase_group_A, Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	7.11133e-98
NZ_CP045087.1\|WP_153478055.1\|3258877_3260272_+\|DUF3426-domain-containing-protein	gnl\|CDD\|378759	pfam11906, DUF3426, Protein of unknown function (DUF3426). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.	2.48319e-40
NZ_CP045087.1\|WP_153478057.1\|3270634_3272002_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP045087.1\|WP_012734593.1\|3256036_3256504_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	9.17441e-87
NZ_CP045087.1\|WP_012734594.1\|3255514_3255967_+\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	6.0764e-96
NZ_CP045087.1\|WP_012734580.1\|3269647_3270547_-\|ABC-transporter-permease	gnl\|CDD\|226621	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only].	5.96045e-62

>NZ_CP045087.1|WP_012734587.1|3261928_3262405_+|glycine-zipper-2TM-domain-containing-protein
MLTRKTLTLTAMLAASVSLTGCFTPPGSADVYSASQTQREQTVRFGTVESVRAVRIESDTGAGSTLGTLGGGALGAVAGSAIGGGRGSILTAIAGGIAGAVAGNAIGQGVSTANGVEITVRLDNGDLRSITQAATPEVFRAGDRVRLLSSGGVTRVTH
>NZ_CP045087.1|WP_012734588.1|3260967_3261906_+|carbohydrate-kinase-family-protein
MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALHALGGDARVMGTLGAIDGQLYLDRFDSLGLARDYVRVVPDTHSAQAMITTDLDNNQITAFHPGAMMQSHLNHAGEARDIRLAIIGPDGFQGMVQHVEELAKAGVPFVFDPGQGLPLFDRETLRRSIELATYLAVNDYEAKLVSDKTGWSEDELASRVQALIITRGEHGATIRHRDGIEQIPVVKAEQIVDPTGCGDAFRGGLLYGIEKGLDWATTGRLASLMGSIKIAHSGPQSYLLGRTEILSRFQSAFGYSIE
>NZ_CP045087.1|WP_012734589.1|3260366_3260870_+|thiol-peroxidase
MSKVTLGGNPIDLAGEFPAVGSQAPDFKLVGQDLGELTLASFAGKRKVLNIVPSLDTPTCATSTRKFNEAAGKLADTVVVVVSADLPFAAKRFCTTEGLENVSTASTFRGGRDFAQAYGVDVTSGPLNGLTARAVVVIDANDKVIYTELVDEIKNEPNYDAALAALK
>NZ_CP045087.1|WP_153478055.1|3258877_3260272_+|DUF3426-domain-containing-protein
MPLATRCPHCETVFRISPKHLKLHGGLARCGHCQQVFDAVNALVDPDSELAPPAAEPASTAGAAPPPPRVFPATAPHAATTPPMGASFEPGAWDMRAPWLDGGIDPTLRHHGGNTGPAPLLPVAAAAAREVPANEAGLARGEPVVPPASGSAPVATPAADPASERVPGPLPAPASEPVAESAAAPAREPAPAPADATPAAPADHGPGSGLAAPAHGASDADLAGLVAALPRAMAEPSFGAAPPAGGHDDGARAPRGGAESGAPGMPPRETEPFAVEPEQDDRIHFAMTRESPAGRRGSNGRQMLGGFLAGLLIVVLAGQLAWWLREPLLTNWPAAQPLFARACAALGCTVEPPRAIDGLRLGASDLRQLDGPRVLELKVPLSNHAALALAYPSIELTLLDASNHVAARRVLAPADYVPPGTRIEAGLAAGTTETMFVRIDTAPGAADGAPGIAASNFRVQIFYP
>NZ_CP045087.1|WP_012734591.1|3257929_3258832_+|50S-ribosomal-protein-L11-methyltransferase
MSYRELVAELAREHAEALSDALIELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWQHSRVIALLADTHDPAVLLAAAANEAGLGAVPSFTLREVEEQDWVRVTQSQFDPIPIGQRIWVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQTVEAGQSVLDYGCGSGILAILAKKCGAGRVIGIDIDPQAVESARHNSERNRAEVDYGLPDDCPPGEFDIVVANILSNPLKLMASMLASKVRPGGRIALSGVLARQADEVAGVYARYIDMSVWREHEGWVCLAGTRRESH
>NZ_CP045087.1|WP_012734592.1|3256559_3257927_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVKLADEAVCIGPAPSNLSYLNMPALISAAEVTDAQAIHPGYGFLSENADFAERVEQSGFTFIGPRPDTIRLMGDKVTAKQTMIRTGVPCVPGSEGALPDDPKEIVKIARAIGYPVIIKASGGGGGRGMRVVHTEAALVNAVNMTREEAGRAFGNPQVYMEKYLENPRHIEIQVLADAHKNALWLGERDCSMQRRHQKVIEEAPAPGIARRLIDRIGDRCADACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGIDIVQEQIKIAAGEKLAIRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTPGGPGVRVDSHAYNGYFVPPNYDSMIGKLIAYGATREQAIQRMRIALSEMVVEGIQTNIPLHRELMLDSKFVEGGTSIHYLEGRLAAKQQVAPEEA
>NZ_CP045087.1|WP_012734593.1|3256036_3256504_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MDLRKLKTLIDLVSESGISELEVTEGEGKVRIVKNAPPVYMQPAAGYAPQVSAAAPAANPAGEGAAPAAAAPAAAAPQGHVVTSPMVGTFYRAPSPGADPFIQVGDTVKEGQTLCIIEAMKLLNEIESDKSGVVKEILVENGQAVEYGQPLFVVG
>NZ_CP045087.1|WP_012734594.1|3255514_3255967_+|type-II-3-dehydroquinate-dehydratase
MIRLLVLHGPNLNLLGTREPEVYGRVTLAEIDRALAARAGEAGAELATFQSNHEGALVDRIHAARDQGTDFIVLNPAAYTHTSVAIRDALAGVGIPFVEVHLSNVHRREPFRHHSYFSDQAEGVICGFGWKGYLHALDYALDKLRDAPRG
>NZ_CP045087.1|WP_012734595.1|3254778_3255321_+|TlpA-family-protein-disulfide-reductase
MNSKRLVSAAVAAVAIAGGLAAGHWVRGDAFENTAEAAPVGDPVSALWAAPVTDPDGKPQSLASFKGQKVVVNFWASWCGPCVKEMPELVALSHEYRQKGIRFVGVGVDSGQNVKAFLQKVKVDYPVVVSGYAGADLARNFGNTAGALPFTVVIDANGKVRMTKLGEIQPDALKKTLDTL
>NZ_CP045087.1|WP_012734596.1|3254126_3254789_+|hypothetical-protein
MPRKPLLDPRRVREEIALSAARLIAEDGLDYASAKRKAARQLLGDSRISGEWLPDNDMLEAELHEYLALFQSETQPAELRYLRQIALDWMERLAPFSPYLAGAVLNGTANAHSDIHLQTFSDSQKEIAIYLLNHNIQYDVSETRHFAGRGDVETLSFLWRTRQDTEAVGIHVALYDSEDLRGAVRADARGRLARANAAALRALLDAPATSSTSIRSEDEQ
>NZ_CP045087.1|WP_012734584.1|3263719_3264943_-|ribonucleotide-diphosphate-reductase-subunit-beta
MLNWDDEKTAVTPASGAQHNAMRAPAGMAVGVQAATPAAHQAPSARDIFEGDLAVAPHASAAAAVAGAQERVNIADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVRRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRDKDEFLIPFIHTLTDPAFVTGTQDADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGLNAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE
>NZ_CP045087.1|WP_012734582.1|3268768_3269350_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MSEVLEVGADGWLPGARHAPSPNHEARPAGVVPTLVVVHNISLPPGEFGGEAIVALFQNRLDCDAHPYYDLNLRGLRVSAHFLIARDGELIQFVSCEARAWHAGISTFLGRERCNDFSIGIELEGTDDLPFEPAQYVTLAALVRALAARYPIEAVAGHADIAPGRKTDPGPHFDWQRLAADAGLPPRYFPYRR
>NZ_CP045087.1|WP_012734581.1|3269346_3269634_-|hypothetical-protein
MRNLLLLILLFIAGSWVSRKLRQAQERANRGGGGAPGQGGPRPSAARTPSLPEPMVRCALCGVHTPKGDAVEAGGDYFCSREHAARHAAAARDAQ
>NZ_CP045087.1|WP_012734580.1|3269647_3270547_-|ABC-transporter-permease
MDIVLYALTALLYGGLAVAGWRAHRSGLVQPLAASVPPVPGEPGAPATAVGGADRALLFAALLAHGVLLHATIFPHDAMVFGFAFALSAMFWLGAGIYWIESFFFPLDGLRLLVLPLACLASLLPLVFGGVRVLPYAAAPLFKMHFLIANIAYGLFVIAALHAVLMLMTERRLQALRQGGRIGSAGVLTSWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRFDHKTVFAILSWCMFGGILVARRLSGWRGRGAARWVLASFGALLLAYVGSRFVLEVLLHRPVV
>NZ_CP045087.1|WP_153478057.1|3270634_3272002_+|signal-recognition-particle-protein
MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKALGEEVISSLSPGQALVGVVQKELTAVIGGDYEGKAVGLNLAVTPPAIILMAGLQGAGKTTTVGKLAKLLREKQKKKVLTVSCDVYRPAAIAQLKTVSEQVGADFFPSTPEQKPVEIARAALDWARRHYHDVLIVDTAGRLGIDEAMMKEIAELHAAINPAETLFVVDAMLGQDAVNTAKAFNDALPLTGVVLTKLDGDSRGGAALSVRSITGKPIKFVGVAEKLDGLEVFHPDRMANRILGMGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQISQMKNMGGLSSLMDKLPAQFQQAAAGADMGHAEKQIRRMEGIINSMTPAERAKPDLIKATRKRRIAAGAGVPVQEVNRMLNQYDQMRTMMKKLKGGNMQKMMRGLKGMMPGLR
>NZ_CP045087.1|WP_012734578.1|3272138_3272690_+|hypoxanthine-guanine-phosphoribosyltransferase
MNREEALHIFQHSEQIVSADEVSASIGRMAAAIRDEIGEAFPLVLSVMGGAAVFTGMLLPHLDFPLEFDYIHLTRYRNTTQGSPEMHWRVAPRESVKDRIVIVLDDILDEGETMAAIRDRILEMGAKRFLSAVLCEKTLTKPKPLRPDFCGFSVPDRYVFGCGMDAKGYWRNLPTIRALTAEA
>NZ_CP045087.1|WP_012734577.1|3272803_3273406_-|MarC-family-protein
MEYNFMSATVLLLLITDPLGNIPLFIAALRDVPGERRVRVILREVAIAFVILLVFMVVGDRFLRMMSLTDLSLRIGGGIVLFLIALRMIFPHPDGAFGSDPRAGGEPFIVPLAIPALAGPSALATVMLLTSQAPGKTVEWIGALTVTMLVCATVLVLAGRIQSWLGERTVMAFERLMGLVLVAISVEMILAGIRAFSHQL
>NZ_CP045087.1|WP_012734576.1|3273479_3275216_-|proline--tRNA-ligase
MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRIAGGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDQAGLKESYRKMYDAYVRVFTRIGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDFAANVEAAEALPLLASRAAPAEAMAKVATPGKAKCEAVAELLNIPLERTIKSIVLATENEGAEPTIWLLMLRGDHDLNEIKAAKQPGLAGYRMASEAEIVEWFGTPPGYLGPVGTKKPVKVIADRTVANMSDFVVGANEVDYHIAGVNWGRDLPEPVVADLRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSKALGATFLDEGGKPQPMEMGCYGIGVTRILGAAIEQNFDDRGIIWPEAIAPFEVVLCPMGYDRSELVRETADQLYAALSAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDTEATLLPADGAAATVIETVRAALAR
>NZ_CP045087.1|WP_012734575.1|3275435_3276068_+|RNA-pyrophosphohydrolase
MLDREGFRPNVGIILLNARNEVFWGKRLREHSWQFPQGGIKYGETPMQAMFRELHEETGLLPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMVGRDCDICLRATDHPEFDAWRWNEYWVPLDAVIEFKRDVYQLALTELSRFLRRPAQRPDNKARVARPTRYPRVIGVQPVDPSQICSEVEPGASPYDEAPGSFLLRD
>NZ_CP045087.1|WP_012734574.1|3276118_3276718_+|hypothetical-protein
MPRPFFEVCNLKSLAFAAASFAAVAALAGCAHSKSPSQPSNKDDSAFVYLLDRQPTWRENPVDTLPPLPQPSNLLPFEVSQNSPLKFFVDDKSISVGSDGIVRYTSVITSPAGARNVIYEGIRCDTYEWRQYAALNADHDGWDRTVATDWRRIENGNLNAYRAALYQDYFCSNKMPAAKAGTIIDNLRAHRTILNQQVR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045087_2	2.2\|2758523\|21\|NZ_CP045087\|CRISPRCasFinder	2758523-2758543	21	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	58127-58147	1	0.952
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1660313-1660333	1	0.952
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NC_031279	Mycobacterium phage Bactobuster, complete genome	18308-18328	1	0.952
NZ_CP045087_3	3.5\|3263007\|21\|NZ_CP045087\|CRT	3263007-3263027	21	KX815338	Streptomyces phage Joe, complete genome	23722-23742	1	0.952
NZ_CP045087_3	3.7\|3263100\|21\|NZ_CP045087\|CRT	3263100-3263120	21	KX815338	Streptomyces phage Joe, complete genome	23722-23742	1	0.952
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP007214	Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence	116403-116434	2	0.938
NZ_CP045087_2	2.1\|2758475\|24\|NZ_CP045087\|CRISPRCasFinder	2758475-2758498	24	NZ_CP015585	Roseomonas gilardii strain U14-5 plasmid 1, complete sequence	115580-115603	2	0.917
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	433222-433242	2	0.905
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	646580-646600	2	0.905
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NZ_CP044079	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence	266657-266677	2	0.905
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	25262-25282	2	0.905
NZ_CP045087_3	3.3\|3262896\|21\|NZ_CP045087\|CRT	3262896-3262916	21	NZ_CP038146	Streptomyces sp. S501 plasmid unnamed, complete sequence	44020-44040	2	0.905
NZ_CP045087_3	3.5\|3263007\|21\|NZ_CP045087\|CRT	3263007-3263027	21	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2695874-2695894	2	0.905
NZ_CP045087_3	3.5\|3263007\|21\|NZ_CP045087\|CRT	3263007-3263027	21	MT711979	Streptomyces phage Endor2, complete genome	24001-24021	2	0.905
NZ_CP045087_3	3.7\|3263100\|21\|NZ_CP045087\|CRT	3263100-3263120	21	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2695874-2695894	2	0.905
NZ_CP045087_3	3.7\|3263100\|21\|NZ_CP045087\|CRT	3263100-3263120	21	MT711979	Streptomyces phage Endor2, complete genome	24001-24021	2	0.905
NZ_CP045087_1	1.7\|1943107\|33\|NZ_CP045087\|CRT	1943107-1943139	33	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	242614-242646	3	0.909
NZ_CP045087_1	1.7\|1943107\|33\|NZ_CP045087\|CRT	1943107-1943139	33	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	216809-216841	3	0.909
NZ_CP045087_2	2.1\|2758475\|24\|NZ_CP045087\|CRISPRCasFinder	2758475-2758498	24	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1950638-1950661	3	0.875
NZ_CP045087_2	2.1\|2758475\|24\|NZ_CP045087\|CRISPRCasFinder	2758475-2758498	24	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	931574-931597	3	0.875
NZ_CP045087_2	2.1\|2758475\|24\|NZ_CP045087\|CRISPRCasFinder	2758475-2758498	24	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	210313-210336	3	0.875
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	777285-777311	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	274931-274957	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	636820-636846	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	636820-636846	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	627061-627087	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	636821-636847	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	627061-627087	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	627061-627087	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	627061-627087	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	627061-627087	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	624256-624282	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	627048-627074	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	636817-636843	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	627063-627089	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	636823-636849	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1973431-1973457	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1399630-1399656	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MN586015	Gordonia phage Lauer, complete genome	28542-28568	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	43234-43260	3	0.889
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	134849-134875	4	0.852
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	186356-186382	4	0.852
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	110139-110165	4	0.852
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2176875-2176901	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	2243179-2243205	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1926010-1926036	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	KJ538722	Mycobacterium phage HH92, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	KT222940	Mycobacterium phage Kinbote, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MH727549	Mycobacterium phage Gancho, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MK919482	Mycobacterium phage DeepSoil15, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MT657330	Mycobacterium phage Webster2, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MF919517	Mycobacterium phage LilHazelnut, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	EU203571	Mycobacterium phage Giles, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MK494095	Mycobacterium phage Daegal, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MT818421	Mycobacterium phage Luke, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MH697577	Mycobacterium phage Amochick, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MT684594	Mycobacterium phage Hadrien, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MT114159	Mycobacterium phage Ein37, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	KT246485	Mycobacterium phage OBUpride, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	KT454972	Mycobacterium phage Evanesce, complete genome	155-181	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1624333-1624359	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1427327-1427353	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP012942	Ralstonia solanacearum strain UW163 plasmid pUW163b, complete sequence	5001-5027	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MG962376	Mycobacterium phage Thumb, complete genome	53386-53412	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	KJ567046	Mycobacterium phage Damien, complete genome	53378-53404	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MN010756	Mycobacterium phage Phreeze, complete genome	52951-52977	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NC_023578	Mycobacterium phage Oaker, complete genome	53981-54007	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MH509445	Mycobacterium phage Cborch11, complete genome	53416-53442	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NC_011292	Mycobacterium phage Konstantine, complete genome	54209-54235	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1562978-1563004	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1563014-1563040	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	501915-501941	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	41582-41608	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MT657343	Microbacterium phage GaeCeo, complete genome	29449-29475	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MH590604	Microbacterium phage ColaCorta, complete genome	29225-29251	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MT553340	Microbacterium phage Glamour, complete genome	29217-29243	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MN310543	Microbacterium phage ChickenKing, complete genome	29216-29242	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MN096378	Microbacterium phage MCubed, complete genome	29094-29120	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MH513982	Microbacterium phage Sansa, complete genome	29302-29328	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MK894432	Microbacterium phage Finny, complete genome	29062-29088	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MH590606	Microbacterium phage Andromedas, complete genome	29225-29251	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	MG839027	Microbacterium phage Eleri, complete genome	29069-29095	5	0.815
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1256214-1256240	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	814862-814888	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1177958-1177984	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1177925-1177951	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1104125-1104151	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1176730-1176756	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1104125-1104151	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1176767-1176793	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1104125-1104151	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1104125-1104151	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1104125-1104151	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1176767-1176793	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1176756-1176782	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1068382-1068408	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1081040-1081066	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1176756-1176782	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1177923-1177949	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1176767-1176793	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1104126-1104152	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1176778-1176804	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1176756-1176782	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	973179-973205	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1648905-1648931	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1432008-1432034	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1037638-1037664	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1063063-1063089	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	292440-292466	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1633123-1633149	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	45290-45316	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1070814-1070840	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	96232-96258	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	998239-998265	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1070803-1070829	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1105097-1105123	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	959387-959413	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	959387-959413	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	988834-988860	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1634214-1634240	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	903998-904024	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1080999-1081025	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1409375-1409401	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	982013-982039	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1322513-1322539	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	785668-785694	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	994430-994456	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	896483-896509	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	991133-991159	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	989294-989320	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	2052399-2052425	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1076486-1076512	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1081022-1081048	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	954561-954587	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1076486-1076512	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1076486-1076512	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	954584-954610	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1076490-1076516	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	954584-954610	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	993604-993630	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	974280-974306	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1022226-1022252	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	954584-954610	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1076485-1076511	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	954584-954610	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	954584-954610	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	1242-1268	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	27812-27838	6	0.778
NZ_CP045087_3	3.1\|3262776\|27\|NZ_CP045087\|CRT	3262776-3262802	27	CP003950	Rhodococcus opacus PD630 plasmid 1, complete sequence	24229-24255	6	0.778
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	194572-194603	7	0.781
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1618545-1618576	7	0.781
NZ_CP045087_1	1.7\|1943107\|33\|NZ_CP045087\|CRT	1943107-1943139	33	NC_009427	Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence	248617-248649	7	0.788
NZ_CP045087_1	1.10\|1943290\|32\|NZ_CP045087\|CRT	1943290-1943321	32	GQ919031	Streptomyces phage ZL12, complete genome	62929-62960	7	0.781
NZ_CP045087_3	3.4\|3262944\|36\|NZ_CP045087\|CRT	3262944-3262979	36	CP003954	Rhodococcus opacus PD630 plasmid 5, complete sequence	15847-15882	7	0.806
NZ_CP045087_3	3.4\|3262944\|36\|NZ_CP045087\|CRT	3262944-3262979	36	CP003954	Rhodococcus opacus PD630 plasmid 5, complete sequence	15940-15975	7	0.806
NZ_CP045087_1	1.2\|1943102\|38\|NZ_CP045087\|PILER-CR,CRISPRCasFinder	1943102-1943139	38	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	242609-242646	8	0.789
NZ_CP045087_1	1.2\|1943102\|38\|NZ_CP045087\|PILER-CR,CRISPRCasFinder	1943102-1943139	38	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	216809-216846	8	0.789
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	138393-138424	8	0.75
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	433456-433487	8	0.75
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	10021-10052	8	0.75
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1300782-1300813	8	0.75
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1879937-1879968	8	0.75
NZ_CP045087_3	3.9\|3263193\|45\|NZ_CP045087\|CRT	3263193-3263237	45	MK875791	Gordonia phage Yakult, complete genome	26737-26781	8	0.822
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	684374-684405	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	676977-677008	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	579738-579769	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	638562-638593	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	578853-578884	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	577639-577670	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	577629-577660	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	579726-579757	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	579745-579776	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	579723-579754	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	684432-684463	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	684432-684463	10	0.688
NZ_CP045087_1	1.6\|1943047\|32\|NZ_CP045087\|CRT	1943047-1943078	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	684421-684452	10	0.688
NZ_CP045087_3	3.2\|3262830\|39\|NZ_CP045087\|CRT	3262830-3262868	39	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	452895-452933	10	0.744

1. spacer 2.2|2758523|21|NZ_CP045087|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 1, identity: 0.952

ggccgcgaggctcgcgagccg	CRISPR spacer
ggccgcgaggatcgcgagccg	Protospacer
********** **********

2. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 1, identity: 0.952

cgcggccttcttcgccgccac	CRISPR spacer
cgcggccttcttcgccgcctc	Protospacer
******************* *

3. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NC_031279 (Mycobacterium phage Bactobuster, complete genome) position: , mismatch: 1, identity: 0.952

cgcggccttcttcgccgccac	CRISPR spacer
cgccgccttcttcgccgccac	Protospacer
*** *****************

4. spacer 3.5|3263007|21|NZ_CP045087|CRT matches to KX815338 (Streptomyces phage Joe, complete genome) position: , mismatch: 1, identity: 0.952

tgccttcttggccggtgccgc	CRISPR spacer
tgccttcttggccggtgccgg	Protospacer
********************

5. spacer 3.7|3263100|21|NZ_CP045087|CRT matches to KX815338 (Streptomyces phage Joe, complete genome) position: , mismatch: 1, identity: 0.952

tgccttcttggccggtgccgc	CRISPR spacer
tgccttcttggccggtgccgg	Protospacer
********************

6. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP007214 (Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence) position: , mismatch: 2, identity: 0.938

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
ctaccggcgcgaacttgaacgcctgctgctct	Protospacer
*************** **.*************

7. spacer 2.1|2758475|24|NZ_CP045087|CRISPRCasFinder matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.917

gaggcacgcgagggccgcggcaat	CRISPR spacer
gaggcaggcgagggcggcggcaat	Protospacer
****** ******** ********

8. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 2, identity: 0.905

cgcggccttcttcgccgccac	CRISPR spacer
cgcggccttcttcgccgcctt	Protospacer
******************* .

9. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 2, identity: 0.905

cgcggccttcttcgccgccac	CRISPR spacer
cgcggccttcttcgccgccgg	Protospacer
*******************.

10. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NZ_CP044079 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.905

cgcggccttcttcgccgccac	CRISPR spacer
cgcggccttcttcgccgcccg	Protospacer
*******************

11. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 2, identity: 0.905

cgcggccttcttcgccgccac	CRISPR spacer
cgcggccttcttcgccgcccg	Protospacer
*******************

12. spacer 3.3|3262896|21|NZ_CP045087|CRT matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.905

cgcggccttcttcgccgccac	CRISPR spacer
cgcggccttcttcgccgccgg	Protospacer
*******************.

13. spacer 3.5|3263007|21|NZ_CP045087|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.905

tgccttcttggccggtgccgc	CRISPR spacer
tgccttcttggccggtgcctt	Protospacer
******************* .

14. spacer 3.5|3263007|21|NZ_CP045087|CRT matches to MT711979 (Streptomyces phage Endor2, complete genome) position: , mismatch: 2, identity: 0.905

tgccttcttggccggtgccgc	CRISPR spacer
cgccttcttggccggtgccgt	Protospacer
.*******************.

15. spacer 3.7|3263100|21|NZ_CP045087|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.905

tgccttcttggccggtgccgc	CRISPR spacer
tgccttcttggccggtgcctt	Protospacer
******************* .

16. spacer 3.7|3263100|21|NZ_CP045087|CRT matches to MT711979 (Streptomyces phage Endor2, complete genome) position: , mismatch: 2, identity: 0.905

tgccttcttggccggtgccgc	CRISPR spacer
cgccttcttggccggtgccgt	Protospacer
.*******************.

17. spacer 1.7|1943107|33|NZ_CP045087|CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 3, identity: 0.909

cacgagcgcacacggcaccggccagtgcgtgca	CRISPR spacer
aacgagcgcacacggcaccggacattgcgtgca	Protospacer
 ******************** ** ********

18. spacer 1.7|1943107|33|NZ_CP045087|CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 3, identity: 0.909

cacgagcgcacacggcaccggccagtgcgtgca	CRISPR spacer
aacgagcgcacacggcaccggacattgcgtgca	Protospacer
 ******************** ** ********

19. spacer 2.1|2758475|24|NZ_CP045087|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 3, identity: 0.875

gaggcacgcgagggccgcggcaat	CRISPR spacer
caggcaagcgagggccgcggcaac	Protospacer
 ***** ****************.

20. spacer 2.1|2758475|24|NZ_CP045087|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 3, identity: 0.875

gaggcacgcgagggccgcggcaat	CRISPR spacer
gaggcgcgcgagggccgcgccaac	Protospacer
*****.************* ***.

21. spacer 2.1|2758475|24|NZ_CP045087|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.875

gaggcacgcgagggccgcggcaat	CRISPR spacer
gaggcgcgcgagggccgcgccaac	Protospacer
*****.************* ***.

22. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

23. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

24. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

25. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

26. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

27. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

28. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

29. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

30. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

31. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

32. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

33. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

34. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

35. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

36. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

37. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

38. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

39. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

40. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

41. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

42. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

43. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

44. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
tgcggccttcttcgccgatgcagcctt	Protospacer
 ** *************.*********

45. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MN586015 (Gordonia phage Lauer, complete genome) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ggcggccttcttcgccggcgcagcctt	Protospacer
.** **************.********

46. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 3, identity: 0.889

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgccttcctcgccggggcagccgt	Protospacer
**********.******* ****** *

47. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.852

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcggcggggcagccgt	Protospacer
 ************* *** ****** *

48. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 4, identity: 0.852

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcggcggggcagccgt	Protospacer
 ************* *** ****** *

49. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.852

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcggcggggcagccgt	Protospacer
 ************* *** ****** *

50. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggtgcggtcac	Protospacer
 ********************.*.* .

51. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggtgcggtcac	Protospacer
 ********************.*.* .

52. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggtgccgtcac	Protospacer
 ******************** *.* .

53. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to KJ538722 (Mycobacterium phage HH92, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

54. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to KT222940 (Mycobacterium phage Kinbote, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

55. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MH727549 (Mycobacterium phage Gancho, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

56. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MK919482 (Mycobacterium phage DeepSoil15, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

57. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MT657330 (Mycobacterium phage Webster2, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

58. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MF919517 (Mycobacterium phage LilHazelnut, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

59. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to EU203571 (Mycobacterium phage Giles, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

60. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MK494095 (Mycobacterium phage Daegal, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

61. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MT818421 (Mycobacterium phage Luke, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

62. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MH697577 (Mycobacterium phage Amochick, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

63. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MT684594 (Mycobacterium phage Hadrien, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

64. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MT114159 (Mycobacterium phage Ein37, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

65. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to KT246485 (Mycobacterium phage OBUpride, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

66. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to KT454972 (Mycobacterium phage Evanesce, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgcctttttcgccggtgcggcccc	Protospacer
 ********.***********.***..

67. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggtgccgtcac	Protospacer
 ******************** *.* .

68. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggtgccgtcac	Protospacer
 ******************** *.* .

69. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP012942 (Ralstonia solanacearum strain UW163 plasmid pUW163b, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ggccgccttcttcgccggtgtgctctt	Protospacer
.*******************.. .***

70. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MG962376 (Mycobacterium phage Thumb, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgctttcttcgccggtgccttttt	Protospacer
******.**************  ..**

71. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to KJ567046 (Mycobacterium phage Damien, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgctttcttcgccggtgccttttt	Protospacer
******.**************  ..**

72. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MN010756 (Mycobacterium phage Phreeze, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgctttcttcgccggtgccttttt	Protospacer
******.**************  ..**

73. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NC_023578 (Mycobacterium phage Oaker, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgctttcttcgccggtgccttttt	Protospacer
******.**************  ..**

74. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MH509445 (Mycobacterium phage Cborch11, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgctttcttcgccggtgccttttt	Protospacer
******.**************  ..**

75. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NC_011292 (Mycobacterium phage Konstantine, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
agccgctttcttcgccggtgccttttt	Protospacer
******.**************  ..**

76. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cggagccttcttggccggtgcggcctt	Protospacer
 *  ******** ********.*****

77. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttggccggtgcggcctt	Protospacer
.*  ******** ********.*****

78. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
aaaggccttcttcgccggtaaagcctt	Protospacer
*.  ***************. ******

79. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
atacgccttcttcaccggtgcaggctc	Protospacer
*  **********.********* **.

80. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MT657343 (Microbacterium phage GaeCeo, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cggagccttcttcgccggagcggcctt	Protospacer
 *  ************** **.*****

81. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MH590604 (Microbacterium phage ColaCorta, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttcgccggagcggcctt	Protospacer
.*  ************** **.*****

82. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MT553340 (Microbacterium phage Glamour, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttcgccggagcggcctt	Protospacer
.*  ************** **.*****

83. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MN310543 (Microbacterium phage ChickenKing, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cggagccttcttcgccggagcggcctt	Protospacer
 *  ************** **.*****

84. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MN096378 (Microbacterium phage MCubed, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cggagccttcttcgccggagcggcctt	Protospacer
 *  ************** **.*****

85. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MH513982 (Microbacterium phage Sansa, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttcgccggagcggcctt	Protospacer
.*  ************** **.*****

86. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MK894432 (Microbacterium phage Finny, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttcgccggagcggcctt	Protospacer
.*  ************** **.*****

87. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MH590606 (Microbacterium phage Andromedas, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttcgccggagcggcctt	Protospacer
.*  ************** **.*****

88. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to MG839027 (Microbacterium phage Eleri, complete genome) position: , mismatch: 5, identity: 0.815

agccgccttcttcgccggtgcagcctt	CRISPR spacer
gggagccttcttcgccggagcggcctt	Protospacer
.*  ************** **.*****

89. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

90. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

91. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

92. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

93. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

94. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

95. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

96. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

97. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

98. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

99. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

100. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

101. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

102. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

103. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

104. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

105. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

106. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

107. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

108. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

109. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

110. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

111. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

112. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

113. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

114. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

115. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggcgcagtgac	Protospacer
 *****************.****.  .

116. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

117. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

118. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

119. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

120. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

121. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

122. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

123. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

124. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

125. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

126. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

127. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

128. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

129. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

130. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

131. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

132. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

133. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

134. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

135. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

136. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

137. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccggcgcagtgac	Protospacer
 *****************.****.  .

138. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

139. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

140. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

141. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

142. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

143. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

144. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

145. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

146. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

147. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

148. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

149. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

150. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

151. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

152. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ccccgccttcttcgccgatgcagcacg	Protospacer
  ***************.****** .

153. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
cgccgccttcttcgccgatgcggcggc	Protospacer
 ****************.***.**  .

154. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ctgcgccttcttcaacggtgcagcctc	Protospacer
   **********. ***********.

155. spacer 3.1|3262776|27|NZ_CP045087|CRT matches to CP003950 (Rhodococcus opacus PD630 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.778

agccgccttcttcgccggtgcagcctt	CRISPR spacer
ggccgacttcttcgccggtgcggcagg	Protospacer
.**** ***************.**

156. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.781

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
cgaccggctcgaactggagggcctgctcgggt	Protospacer
* ****** ********** *******    *

157. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.781

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
cgaccggctcgaactggagggcctgctcgggt	Protospacer
* ****** ********** *******    *

158. spacer 1.7|1943107|33|NZ_CP045087|CRT matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 7, identity: 0.788

cacgagcgcacacggcaccggccagtgcgtgca	CRISPR spacer
caccagcgcacagggcaccggccacgccgcgga	Protospacer
*** ******** ***********   **.* *

159. spacer 1.10|1943290|32|NZ_CP045087|CRT matches to GQ919031 (Streptomyces phage ZL12, complete genome) position: , mismatch: 7, identity: 0.781

cgcgtcatgcgaaacggatacgtcgagatccc	CRISPR spacer
aactccatgcgaaacggatacgccgcgatctc	Protospacer
 .* .*****************.** ****.*

160. spacer 3.4|3262944|36|NZ_CP045087|CRT matches to CP003954 (Rhodococcus opacus PD630 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.806

aaccttcttcgcagccggcgccttcttggcgacaac	CRISPR spacer
cgtcttcttcgccgccggtgccttcttggcgactgc	Protospacer
 ..********* *****.************** .*

161. spacer 3.4|3262944|36|NZ_CP045087|CRT matches to CP003954 (Rhodococcus opacus PD630 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.806

aaccttcttcgcagccggcgccttcttggcgacaac	CRISPR spacer
cgtcttcttcgccgccggtgccttcttggcgactgc	Protospacer
 ..********* *****.************** .*

162. spacer 1.2|1943102|38|NZ_CP045087|PILER-CR,CRISPRCasFinder matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.789

cgaaccacgagcgcacacggcaccggccagtgcgtgca	CRISPR spacer
gctgtaacgagcgcacacggcaccggacattgcgtgca	Protospacer
   .. ******************** ** ********

163. spacer 1.2|1943102|38|NZ_CP045087|PILER-CR,CRISPRCasFinder matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 8, identity: 0.789

cgaaccacgagcgcacacggcaccggccagtgcgtgca	CRISPR spacer
gctgtaacgagcgcacacggcaccggacattgcgtgca	Protospacer
   .. ******************** ** ********

164. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gacccggcgcgatctggagcgcctgctcggcc	Protospacer
   ********* **************   *.

165. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 8, identity: 0.75

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
cctgcgccgcgaactggatcgcctgctgcgac	Protospacer
*.  ** *********** **********  .

166. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 8, identity: 0.75

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
acaatggcgcgaactggggcgcctgctggggt	Protospacer
 .* .************.**********   *

167. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
cttgcggcgcgaactgctgcgcctgcttgacc	Protospacer
**  ************  *********   *.

168. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
cttgcggcgcgaactgctgcgcctgcttgacc	Protospacer
**  ************  *********   *.

169. spacer 3.9|3263193|45|NZ_CP045087|CRT matches to MK875791 (Gordonia phage Yakult, complete genome) position: , mismatch: 8, identity: 0.822

agccttcttcgccggtgccgctgccttcttggcaaccggagccgc--	CRISPR spacer
ggccttcttcgccggcgccgctgccttcttggcggc--gggtcgctt	Protospacer
.**************.*****************..*  *.*.***

170. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

171. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

172. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

173. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

174. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

175. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

176. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

177. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

178. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

179. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

180. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

181. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

182. spacer 1.6|1943047|32|NZ_CP045087|CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ctaccggcgcgaactggagcgcctgctgctct	CRISPR spacer
gcgccgccgcgagctggagcgcctgcccgacc	Protospacer
 ..*** *****.*************.   *.

183. spacer 3.2|3262830|39|NZ_CP045087|CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 10, identity: 0.744

tgccggcgtctttgcagcggccttcttcgccggtgcggc	CRISPR spacer
cacaggcgccttcgcagcggccttcttcgccggcacctt	Protospacer
..* ****.***.********************..*  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

291676 : 381271

uncultured_Mediterranean_phage(10.71%)

transposase,tRNA,integrase,protease

attL 320365:320387|attR 369264:369286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012734406.1\|291676_292405_+\|transposase	transposase	NA	NA	NA	NA
WP_012734407.1\|292674_297375_+	glutamate synthase subunit alpha	NA	NA	NA	NA
WP_017922999.1\|297479_298946_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_012734409.1\|299036_300785_-	ABC transporter ATP-binding protein/permease	M1HP82	Acanthocystis_turfacea_Chlorella_virus	8.5e-05	29.0
WP_012734410.1\|301501_302668_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_012734411.1\|302696_302894_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_012734412.1\|302942_303758_+	thiazole synthase	NA	NA	NA	NA
WP_100556277.1\|303754_304852_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_012734414.1\|305156_305975_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.0e-21	29.9
WP_012734415.1\|305971_306739_+	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_012734416.1\|306755_307262_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_012734417.1\|307326_308313_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_012734418.1\|308420_309047_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012734419.1\|309043_309313_+	STAS domain-containing protein	NA	NA	NA	NA
WP_020381404.1\|309494_310421_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.8e-22	28.8
WP_012734421.1\|310417_311173_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_012734422.1\|311196_311436_+	BolA family transcriptional regulator	NA	NA	NA	NA
WP_012734423.1\|311452_312799_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_012734424.1\|312795_313452_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_012734425.1\|313492_314818_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_012734426.1\|314968_316039_+	histidinol-phosphate transaminase	A0A1X7BZP2	Faustovirus	1.7e-11	24.3
WP_012734427.1\|316114_316702_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_012734428.1\|316799_317420_+	NAAT family transporter	NA	NA	NA	NA
WP_012734429.1\|317416_318058_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_012734430.1\|318222_318978_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_012734431.1\|319062_319836_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_012734432.1\|319838_320258_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_153477202.1\|320254_320620_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
320365:320387	attL	NA	NA	NA	NA
WP_012734434.1\|320666_321083_+	membrane protein	NA	NA	NA	NA
WP_153477203.1\|321114_321480_+	HIT domain-containing protein	NA	NA	NA	NA
WP_012734436.1\|321602_321836_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA
WP_012734437.1\|321862_322405_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA
WP_012734438.1\|322458_323241_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.6e-27	31.3
WP_012734439.1\|323553_324759_-	Do family serine endopeptidase	A0A1B1IRD3	uncultured_Mediterranean_phage	3.2e-11	34.3
WP_012734440.1\|324780_325527_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_012734441.1\|325746_326367_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_012734442.1\|326366_327749_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_012734443.1\|327771_328530_+	cytochrome c1	NA	NA	NA	NA
WP_012734444.1\|328626_329238_+	glutathione S-transferase	NA	NA	NA	NA
WP_012734445.1\|329301_329820_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.2e-20	48.6
WP_017424055.1\|329990_331019_-\|integrase	tyrosine-type recombinase/integrase	E5E3T0	Burkholderia_phage	1.0e-191	99.4
WP_034176285.1\|331018_331297_-	DUF4224 domain-containing protein	E5E3T1	Burkholderia_phage	8.1e-43	97.7
WP_153477204.1\|334655_334952_-	hypothetical protein	A0A2D1GNL7	Pseudomonas_phage	2.8e-09	36.0
WP_153477205.1\|335519_336776_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	3.6e-21	26.2
WP_153478157.1\|336778_337396_+	DUF4276 family protein	NA	NA	NA	NA
WP_153477206.1\|337715_337934_-	hypothetical protein	NA	NA	NA	NA
WP_153477207.1\|337896_339090_-	hypothetical protein	NA	NA	NA	NA
WP_153477208.1\|339733_339982_-\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	2.3e-20	65.5
WP_015877613.1\|340118_341165_+\|transposase	IS481-like element IS1419 family transposase	A0A0M3LS26	Mannheimia_phage	7.1e-148	73.9
WP_153477209.1\|343430_344687_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.5e-48	33.5
WP_012732871.1\|344683_345550_+	ATPase AAA	U5N3V8	Enterobacteria_phage	2.8e-49	44.1
WP_153477210.1\|345627_345843_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_153477211.1\|345911_346958_-\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	1.1e-148	73.3
WP_153477212.1\|347049_348221_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.8e-91	61.5
WP_153477213.1\|348450_348642_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-17	58.6
WP_153477214.1\|348656_351143_+	N-6 DNA methylase	B3GAM1	uncultured_virus	8.1e-25	37.0
WP_153477215.1\|351214_352495_+	hypothetical protein	NA	NA	NA	NA
WP_153478158.1\|352566_355002_+	AAA domain-containing protein	K4I1H4	Acidithiobacillus_phage	1.5e-39	34.3
WP_153477216.1\|355013_356342_+	2-keto-D-gluconate dehydrogenase	NA	NA	NA	NA
WP_012732738.1\|356832_357852_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153477217.1\|358327_359878_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	4.2e-157	54.4
WP_006400877.1\|359893_360643_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.8e-81	61.2
WP_012734051.1\|361481_361958_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_012732753.1\|361933_362284_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012732752.1\|362315_363872_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	4.1e-67	34.0
WP_153477218.1\|363823_364924_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153477219.1\|364924_365230_-	hypothetical protein	NA	NA	NA	NA
WP_015877104.1\|365777_366035_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_006398175.1\|366383_366722_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_035981926.1\|366772_368239_+	ammonium transporter	NA	NA	NA	NA
WP_015877102.1\|368493_369783_+	glutamate--cysteine ligase	NA	NA	NA	NA
369264:369286	attR	NA	NA	NA	NA
WP_017923398.1\|369854_370811_+	glutathione synthase	NA	NA	NA	NA
WP_015877100.1\|371047_371518_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_015877099.1\|371603_371873_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_015877098.1\|372095_373868_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	1.5e-12	28.4
WP_015877097.1\|374003_374756_-	molybdopterin-synthase adenylyltransferase MoeB	A0A1V0SCZ9	Indivirus	2.5e-06	31.7
WP_015877096.1\|374919_376476_-	S41 family peptidase	NA	NA	NA	NA
WP_015877095.1\|376778_377525_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_015877094.1\|377660_378068_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_015877093.1\|378079_378340_+	glutaredoxin 3	V9QKN6	Rhizobium_phage	2.6e-11	44.9
WP_015877092.1\|378463_378949_+	protein-export chaperone SecB	NA	NA	NA	NA
WP_015877091.1\|378975_379974_+	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_017924300.1\|380216_380738_+	O-acetyl-ADP-ribose deacetylase	F1SVT2	Red_sea_bream_iridovirus	4.4e-34	50.6
WP_015877089.1\|380800_381271_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA

DBSCAN-SWA_2

735950 : 743483

Bacillus_thuringiensis_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015876803.1\|735950_736316_+	response regulator	Q56AR1	Bacillus_thuringiensis_phage	1.2e-06	29.8
WP_153477277.1\|736395_738000_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_004196460.1\|738123_738327_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_015876801.1\|738856_739171_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	7.6e-13	43.4
WP_015876800.1\|739167_741465_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.4e-169	42.2
WP_015876799.1\|741741_742188_-	dUTP diphosphatase	Q2NP83	Xanthomonas_phage	6.7e-47	63.7
WP_015876798.1\|742271_743483_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	6.3e-39	31.1

DBSCAN-SWA_3

810628 : 877471

Escherichia_phage(21.43%)

transposase,tRNA,integrase,protease

attL 847601:847617|attR 878794:878810

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100556004.1\|810628_812785_-\|tRNA	methionine--tRNA ligase	K7Y9Y6	Megavirus	3.8e-47	27.7
WP_153477286.1\|812949_813156_+	hypothetical protein	NA	NA	NA	NA
WP_153477287.1\|813279_813939_-	OmpA family protein	NA	NA	NA	NA
WP_017923651.1\|814272_815361_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_015876725.1\|815486_816014_+	superoxide dismutase family protein	NA	NA	NA	NA
WP_015876724.1\|816124_816694_+	dCTP deaminase	S5VM63	Pseudomonas_phage	1.7e-71	70.1
WP_015876723.1\|816782_819062_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA
WP_017423934.1\|819082_819790_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_015876721.1\|819895_821302_-	argininosuccinate lyase	NA	NA	NA	NA
WP_015876720.1\|821473_822304_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015876719.1\|822554_825650_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_153477288.1\|825843_826812_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_035980043.1\|829086_830277_+	heme biosynthesis protein HemY	NA	NA	NA	NA
WP_015876715.1\|830349_831654_-	MFS transporter	NA	NA	NA	NA
WP_015876714.1\|831765_832524_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_015876713.1\|832598_834038_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_015876712.1\|834263_834791_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	5.8e-50	53.8
WP_015876710.1\|835421_836600_-	N-acetyltransferase	NA	NA	NA	NA
WP_015876709.1\|836702_838388_+	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	3.3e-94	37.5
WP_013699037.1\|838441_838780_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_017423148.1\|838941_840036_-	porin	NA	NA	NA	NA
WP_153477289.1\|840819_841866_-\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	9.9e-150	73.9
WP_043307663.1\|841983_842763_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.3e-17	27.9
WP_015876706.1\|842781_843495_-	ABC transporter permease	NA	NA	NA	NA
WP_015876705.1\|843491_844181_-	ABC transporter permease	NA	NA	NA	NA
WP_015876704.1\|844361_845138_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015876703.1\|845517_846072_-	periplasmic heavy metal sensor	NA	NA	NA	NA
WP_015876702.1\|846304_847030_+	response regulator	W8CYM9	Bacillus_phage	3.2e-30	35.4
WP_015876701.1\|847013_848327_+	HAMP domain-containing protein	NA	NA	NA	NA
847601:847617	attL	NA	NA	NA	NA
WP_015876700.1\|848391_848658_-	hypothetical protein	NA	NA	NA	NA
WP_015876699.1\|849157_850912_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_015876698.1\|850934_852260_+	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-32	38.1
WP_015876697.1\|852324_852822_-	hypothetical protein	NA	NA	NA	NA
WP_015876696.1\|852818_853454_-	hypothetical protein	NA	NA	NA	NA
WP_015876695.1\|853712_853910_+	hypothetical protein	NA	NA	NA	NA
WP_015876694.1\|854092_855511_+	alpha,alpha-trehalose-phosphate synthase (UDP-forming)	NA	NA	NA	NA
WP_015876693.1\|855503_856151_+	AAA family ATPase	A0A219VHB7	Ochrobactrum_phage	1.2e-23	61.3
WP_017433512.1\|856169_857540_-	MFS transporter	NA	NA	NA	NA
WP_017923656.1\|857674_858178_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_017924830.1\|858368_858749_-	hypothetical protein	NA	NA	NA	NA
WP_015876689.1\|858933_859293_+	hypothetical protein	NA	NA	NA	NA
WP_015876687.1\|860215_860755_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_045678837.1\|860792_861983_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_015876685.1\|862077_862287_-	hypothetical protein	NA	NA	NA	NA
WP_015876684.1\|862408_862678_-	hypothetical protein	NA	NA	NA	NA
WP_017433131.1\|862789_863170_+	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_035979006.1\|863479_863830_+	hypothetical protein	NA	NA	NA	NA
WP_153477290.1\|863927_865586_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_153477291.1\|866013_867639_-	hypothetical protein	NA	NA	NA	NA
WP_153477292.1\|868219_868621_-\|transposase	transposase	NA	NA	NA	NA
WP_153477293.1\|868679_869063_+	hypothetical protein	NA	NA	NA	NA
WP_012732721.1\|869374_870880_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_012732720.1\|870872_871670_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	4.4e-33	37.7
WP_153477294.1\|871729_872287_+	hypothetical protein	Q775E2	Bordetella_phage	8.9e-41	62.6
WP_035982028.1\|872283_872502_+	hypothetical protein	NA	NA	NA	NA
WP_153477295.1\|872516_872909_+	hypothetical protein	NA	NA	NA	NA
WP_153477296.1\|873083_874130_+\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	7.6e-150	73.9
WP_153477297.1\|874691_875891_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.7e-84	44.5
WP_059497642.1\|876364_877471_+\|integrase	site-specific integrase	A0A2D1GMX8	Marinobacter_phage	3.5e-44	31.3
878794:878810	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1194924 : 1257642

Indivirus(13.33%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015876390.1\|1194924_1195587_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_015876389.1\|1195596_1196799_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_015876388.1\|1196872_1197433_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_015876387.1\|1197477_1198380_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_015876386.1\|1198482_1199628_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_015876385.1\|1199632_1200406_+	MBL fold metallo-hydrolase	A0A2I7SDH3	Paenibacillus_phage	1.4e-28	35.8
WP_042967767.1\|1200519_1200786_-	hypothetical protein	NA	NA	NA	NA
WP_085962399.1\|1201015_1202179_-	cupin domain-containing protein	NA	NA	NA	NA
WP_015876383.1\|1202271_1202817_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_043307866.1\|1202867_1204121_-	membrane protein	NA	NA	NA	NA
WP_153477344.1\|1204104_1206816_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	6.3e-23	23.5
WP_015876331.1\|1207446_1208679_-	EAL domain-containing protein	NA	NA	NA	NA
WP_015876330.1\|1208788_1210507_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.6e-10	51.9
WP_015876329.1\|1210857_1211685_+	cytochrome c	NA	NA	NA	NA
WP_015876328.1\|1212093_1212927_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_015876327.1\|1213468_1214494_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_015876326.1\|1214816_1215437_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_039202447.1\|1217100_1218171_+	hypothetical protein	NA	NA	NA	NA
WP_015876324.1\|1218606_1219422_-	inositol monophosphatase	NA	NA	NA	NA
WP_085962366.1\|1219680_1220583_+	RNA methyltransferase	NA	NA	NA	NA
WP_015876322.1\|1220769_1221534_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_015876321.1\|1221597_1222401_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_015876320.1\|1222423_1222915_-	peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.1e-05	29.4
WP_015876319.1\|1223002_1223581_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	2.2e-13	40.7
WP_085962365.1\|1223640_1224507_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_015876317.1\|1224585_1225980_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	9.4e-39	32.6
WP_017423377.1\|1227038_1228010_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_017432558.1\|1229838_1231089_+	aspartate kinase	NA	NA	NA	NA
WP_153478177.1\|1232329_1232662_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_153478178.1\|1232714_1233020_-	H-NS histone family protein	NA	NA	NA	NA
WP_153477345.1\|1233188_1233764_+	hypothetical protein	NA	NA	NA	NA
WP_012732871.1\|1233950_1234817_-	ATPase AAA	U5N3V8	Enterobacteria_phage	2.8e-49	44.1
WP_017432522.1\|1234813_1236070_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	7.7e-48	33.0
WP_153477346.1\|1236089_1236587_+	hypothetical protein	NA	NA	NA	NA
WP_153477348.1\|1236632_1237919_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_153477350.1\|1238592_1239039_+	hypothetical protein	NA	NA	NA	NA
WP_153477351.1\|1239119_1239536_-	DUF2513 domain-containing protein	NA	NA	NA	NA
WP_153477352.1\|1239747_1240137_-	DUF3775 domain-containing protein	NA	NA	NA	NA
WP_153477353.1\|1240329_1241505_-	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	2.2e-161	74.1
WP_153477354.1\|1241514_1242255_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	1.5e-51	48.5
WP_153477355.1\|1242251_1242773_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	3.2e-56	63.6
WP_153477356.1\|1243361_1244885_-	AAA family ATPase	NA	NA	NA	NA
WP_153477357.1\|1244881_1246693_-	AAA family ATPase	NA	NA	NA	NA
WP_085962356.1\|1247008_1247825_+\|transposase	IS5-like element ISBugl2 family transposase	NA	NA	NA	NA
WP_085962421.1\|1247834_1248640_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153477358.1\|1248774_1249473_+	hypothetical protein	NA	NA	NA	NA
WP_153477359.1\|1251684_1253235_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.5e-157	55.2
WP_006400877.1\|1253250_1254000_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.8e-81	61.2
WP_012734051.1\|1255251_1255728_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_012732753.1\|1255703_1256054_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012732752.1\|1256085_1257642_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	4.1e-67	34.0

DBSCAN-SWA_5

1638827 : 1647901

Burkholderia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153477451.1\|1638827_1639106_-	hypothetical protein	Q3HQV5	Burkholderia_phage	1.0e-21	61.2
WP_153477453.1\|1639102_1639780_-	hypothetical protein	O03965	Myxococcus_phage	6.2e-44	42.7
WP_153477455.1\|1639776_1639974_-	hypothetical protein	NA	NA	NA	NA
WP_153477456.1\|1639970_1640999_-	DUF5131 family protein	Q8W6R4	Burkholderia_virus	2.3e-95	55.8
WP_153477458.1\|1640995_1642126_-	hypothetical protein	NA	NA	NA	NA
WP_153477460.1\|1642318_1643011_-	hypothetical protein	Q6JII4	Burkholderia_virus	9.4e-56	50.6
WP_153477462.1\|1643112_1643394_-	hypothetical protein	A9YX18	Burkholderia_phage	1.2e-14	77.8
WP_153477463.1\|1643360_1643792_-	hypothetical protein	NA	NA	NA	NA
WP_153477465.1\|1643788_1645558_-	AAA family ATPase	J7HXJ7	Pseudomonas_phage	3.7e-80	37.3
WP_153477467.1\|1645572_1646766_-	hypothetical protein	J7HXB6	Pseudomonas_phage	1.2e-66	52.4
WP_153477469.1\|1646777_1647587_-	PD-(D/E)XK nuclease family protein	J7HXJ4	Pseudomonas_phage	2.1e-83	55.6
WP_015875567.1\|1647583_1647901_-	KTSC domain-containing protein	A9YWW2	Burkholderia_phage	4.2e-35	71.7

DBSCAN-SWA_6

1651216 : 1691715

Burkholderia_phage(57.5%)

tail,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153477475.1\|1651216_1652509_-	MFS transporter	Q6JIH2	Burkholderia_virus	6.5e-151	66.7
WP_153477477.1\|1652651_1653545_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	2.0e-122	71.3
WP_153477479.1\|1653566_1653977_-	hypothetical protein	K7PK07	Enterobacteria_phage	1.2e-13	48.1
WP_153477481.1\|1654059_1654302_+	Cro/Cl family transcriptional regulator	K7PHA1	Enterobacteria_phage	8.4e-12	47.9
WP_153477482.1\|1654434_1654911_-	hypothetical protein	A0A127KNL4	Pseudomonas_phage	2.1e-22	39.0
WP_052231196.1\|1655025_1655616_+	hypothetical protein	NA	NA	NA	NA
WP_153477484.1\|1655924_1656299_+	hypothetical protein	A9YWX9	Burkholderia_phage	1.9e-47	73.4
WP_153477486.1\|1656295_1656523_+	hypothetical protein	A9YWY0	Burkholderia_phage	2.9e-22	68.5
WP_153477488.1\|1656690_1658595_+	DNA cytosine methyltransferase	Q9ZXI4	Pseudomonas_virus	1.5e-172	60.3
WP_153477490.1\|1658591_1659461_+	hypothetical protein	A9YWY3	Burkholderia_phage	5.6e-114	70.6
WP_153477491.1\|1659457_1659934_+	hypothetical protein	Q6JIG5	Burkholderia_virus	9.0e-66	77.7
WP_153477493.1\|1659930_1661058_+	site-specific DNA-methyltransferase	Q8W6P4	Burkholderia_virus	1.0e-131	62.7
WP_153478187.1\|1661783_1662203_+	hypothetical protein	NA	NA	NA	NA
WP_153477495.1\|1662199_1662394_+	hypothetical protein	NA	NA	NA	NA
WP_153477496.1\|1662390_1662861_+	RusA family crossover junction endodeoxyribonuclease	A9YWY9	Burkholderia_phage	1.8e-50	70.7
WP_153477498.1\|1662870_1663200_+	hypothetical protein	A9YWZ0	Burkholderia_phage	4.6e-29	71.0
WP_153477500.1\|1663196_1663889_+	hypothetical protein	Q6JIF4	Burkholderia_virus	7.7e-26	35.9
WP_153477501.1\|1663980_1664244_+	hypothetical protein	NA	NA	NA	NA
WP_153477503.1\|1664508_1664892_-	hypothetical protein	NA	NA	NA	NA
WP_153478189.1\|1665008_1665608_+	hypothetical protein	A9YWZ4	Burkholderia_phage	1.2e-94	81.4
WP_153477505.1\|1665611_1666295_-	DUF4145 domain-containing protein	M1PSB6	Streptococcus_phage	8.7e-30	36.9
WP_153477507.1\|1666347_1666827_+	DUF2280 domain-containing protein	A9YWZ5	Burkholderia_phage	1.8e-53	70.4
WP_153477509.1\|1666777_1668334_+\|terminase	phage terminase large subunit	W8VT11	Pseudomonas_phage	7.4e-109	45.7
WP_153477511.1\|1668355_1669822_+	DUF1073 domain-containing protein	A9YWZ7	Burkholderia_phage	2.2e-227	80.6
WP_153477513.1\|1669818_1670574_+\|head	phage head morphogenesis protein	A9YWZ8	Burkholderia_phage	3.8e-87	66.7
WP_153477514.1\|1670576_1670870_+	ammonia monooxygenase	A9YWZ9	Burkholderia_phage	5.0e-35	65.3
WP_153478191.1\|1671024_1671414_+	hypothetical protein	A9YX01	Burkholderia_phage	2.4e-32	51.2
WP_153478193.1\|1671562_1673026_+	DUF2213 domain-containing protein	A9YX03	Burkholderia_phage	3.3e-167	69.7
WP_017424288.1\|1673035_1673551_+	hypothetical protein	NA	NA	NA	NA
WP_153477516.1\|1673625_1674726_+	DUF2184 domain-containing protein	A9YX23	Burkholderia_phage	2.4e-146	82.4
WP_153477518.1\|1674727_1675186_+	hypothetical protein	NA	NA	NA	NA
WP_017424285.1\|1675247_1675631_+	DUF4054 domain-containing protein	A9YX25	Burkholderia_phage	2.3e-48	74.0
WP_100555587.1\|1675656_1676244_+	hypothetical protein	A9YX26	Burkholderia_phage	8.0e-40	51.6
WP_015875598.1\|1676305_1676689_+	hypothetical protein	A9YX28	Burkholderia_phage	5.9e-52	79.2
WP_017424284.1\|1676685_1677276_+	hypothetical protein	A9YX29	Burkholderia_phage	1.1e-81	75.9
WP_017424283.1\|1677284_1679096_+	DUF3383 family protein	A0A0P0I492	Acinetobacter_phage	4.0e-90	37.5
WP_017424282.1\|1679111_1679552_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.2e-42	58.2
WP_017424281.1\|1679551_1680004_+	hypothetical protein	A0A0N7IRF3	Acinetobacter_phage	1.8e-15	33.8
WP_017424280.1\|1680178_1682071_+	glucosaminidase	B2ZYI5	Ralstonia_phage	1.6e-25	36.5
WP_017424279.1\|1682067_1682673_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	1.9e-20	39.9
WP_017424278.1\|1682672_1682984_+	hypothetical protein	NA	NA	NA	NA
WP_100555588.1\|1682993_1683965_+	hypothetical protein	A9YX04	Burkholderia_phage	7.1e-94	57.2
WP_153477520.1\|1683961_1684327_-	hypothetical protein	NA	NA	NA	NA
WP_017424277.1\|1684338_1685124_+	hypothetical protein	A9YX06	Burkholderia_phage	4.6e-75	55.9
WP_017424276.1\|1685184_1685538_+	hypothetical protein	A9YX11	Burkholderia_phage	1.3e-40	71.8
WP_017424275.1\|1685534_1686722_+	hypothetical protein	A9YX12	Burkholderia_phage	1.7e-142	68.3
WP_153477522.1\|1686727_1687444_+	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	6.0e-82	67.7
WP_153477524.1\|1687472_1688489_+\|tail	phage tail protein	A9YX14	Burkholderia_phage	8.7e-18	45.9
WP_153477526.1\|1688501_1688732_+	hypothetical protein	NA	NA	NA	NA
WP_153477528.1\|1688744_1690700_+	transporter	NA	NA	NA	NA
WP_039203325.1\|1690759_1691143_+	hypothetical protein	NA	NA	NA	NA
WP_039203323.1\|1691148_1691715_+	lysozyme	A0A059VA40	Pseudomonas_phage	1.6e-32	46.7

DBSCAN-SWA_7

1850070 : 1875953

Burkholderia_phage(93.1%)

terminase,plate,capsid,tail,transposase,head,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017433119.1\|1850070_1850298_+\|transposase	transposase	NA	NA	NA	NA
WP_015875735.1\|1850350_1850680_-	helix-turn-helix domain-containing protein	R4JEU7	Burkholderia_phage	2.3e-28	57.8
WP_015875738.1\|1851980_1852160_+	hypothetical protein	R4JEN9	Burkholderia_phage	6.0e-15	76.3
WP_015875739.1\|1852156_1852387_+	hypothetical protein	R4JJR9	Burkholderia_phage	1.5e-34	93.4
WP_015875740.1\|1852383_1853289_+	DNA adenine methylase	R4JMC6	Burkholderia_phage	6.5e-166	94.7
WP_015875741.1\|1853290_1853506_+	hypothetical protein	R4JG87	Burkholderia_phage	5.5e-23	80.3
WP_153477595.1\|1853696_1855604_+	replication endonuclease	A4JWW0	Burkholderia_virus	1.7e-256	72.5
WP_043307766.1\|1855630_1855879_+	ogr/delta-like zinc finger family protein	R4JMD0	Burkholderia_phage	1.4e-38	91.5
WP_015875745.1\|1855880_1856162_+	ogr/Delta-like zinc finger family protein	R4JG92	Burkholderia_phage	1.6e-46	91.4
WP_015875746.1\|1856158_1857106_+	ParB-like partition protein	R4JDJ1	Burkholderia_phage	3.0e-145	89.8
WP_148270991.1\|1857313_1858357_+	AAA family ATPase	NA	NA	NA	NA
WP_015875748.1\|1858417_1858777_-	type II toxin-antitoxin system HicB family antitoxin	R4JJS9	Burkholderia_phage	6.3e-56	89.1
WP_015875749.1\|1858773_1859028_-	type II toxin-antitoxin system HicA family toxin	R4JMD3	Burkholderia_phage	1.6e-42	100.0
WP_148270992.1\|1859458_1860415_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	1.0e-39	35.1
WP_015875751.1\|1860463_1861396_+	ATP-binding protein	NA	NA	NA	NA
WP_015875752.1\|1861450_1862506_-\|portal	phage portal protein	R4JG97	Burkholderia_phage	7.6e-142	98.8
WP_153477597.1\|1862505_1864323_-\|terminase	terminase	R4JDJ3	Burkholderia_phage	0.0e+00	96.5
WP_015875754.1\|1864477_1865350_+\|capsid	phage capsid scaffolding protein	R4JEQ3	Burkholderia_phage	7.0e-117	75.3
WP_015875757.1\|1866607_1867108_+\|head	head completion/stabilization protein	R4JGC6	Burkholderia_phage	7.4e-87	98.2
WP_015875758.1\|1867107_1867314_+\|tail	tail protein	R4JDL4	Burkholderia_phage	1.5e-33	98.5
WP_015875759.1\|1867321_1867765_+	hypothetical protein	R4JES4	Burkholderia_phage	1.2e-75	98.0
WP_015875760.1\|1867752_1868157_+	hypothetical protein	R4JJW4	Burkholderia_phage	1.0e-62	100.0
WP_015875761.1\|1868192_1868642_+	DUF882 domain-containing protein	R4JMG7	Burkholderia_phage	1.5e-75	98.0
WP_015875762.1\|1868638_1869079_+	protein lysB	R4JGE0	Burkholderia_phage	5.5e-70	99.3
WP_050811399.1\|1869121_1869682_+\|tail	phage tail protein	R4JET5	Burkholderia_phage	7.2e-99	98.4
WP_015875764.1\|1869678_1870152_+	phage virion morphogenesis protein	R4JJX8	Burkholderia_phage	1.8e-79	97.5
WP_015875765.1\|1870284_1871001_+\|plate	phage baseplate assembly protein V	R4JMH2	Burkholderia_phage	2.4e-123	95.8
WP_153477599.1\|1871258_1872170_+	phage late control D family protein	R4JDM6	Burkholderia_phage	1.3e-169	98.7
WP_148270994.1\|1872260_1872611_+	hypothetical protein	NA	NA	NA	NA
WP_148270995.1\|1872706_1873339_+	hypothetical protein	NA	NA	NA	NA
WP_015875779.1\|1873382_1873721_-	hypothetical protein	R4JEU5	Burkholderia_phage	3.1e-52	91.1
WP_015875780.1\|1873720_1874341_-	hypothetical protein	R4JJZ3	Burkholderia_phage	1.1e-119	100.0
WP_015875781.1\|1874344_1874899_-	PAAR domain-containing protein	R4JMI1	Burkholderia_phage	5.5e-99	92.4
WP_153477601.1\|1875425_1875953_-\|transposase	IS21 family transposase	R4JDM9	Burkholderia_phage	7.8e-95	96.6

DBSCAN-SWA_8

2014541 : 2067384

Burkholderia_phage(20.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015875901.1\|2014541_2015552_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_088499465.1\|2016075_2017917_-	transporter	NA	NA	NA	NA
WP_017432901.1\|2018747_2020220_-	hypothetical protein	NA	NA	NA	NA
WP_153477629.1\|2021508_2022325_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_006400877.1\|2022639_2023389_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.8e-81	61.2
WP_012732738.1\|2025428_2026448_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012734051.1\|2027580_2028057_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_012732753.1\|2028032_2028383_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_015875907.1\|2031282_2032899_-	amino acid adenylation domain-containing protein	NA	NA	NA	NA
WP_015875908.1\|2032895_2033849_-	hypothetical protein	NA	NA	NA	NA
WP_015875909.1\|2033914_2036188_-	N,N-dimethylformamidase large subunit	NA	NA	NA	NA
WP_015875910.1\|2036184_2037888_-	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.0e-22	25.1
WP_080569301.1\|2037924_2039223_-	hypothetical protein	NA	NA	NA	NA
WP_017433090.1\|2039137_2039425_-	hypothetical protein	NA	NA	NA	NA
WP_080763615.1\|2039460_2040480_-	hypothetical protein	NA	NA	NA	NA
WP_015875913.1\|2040492_2041485_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	1.5e-152	83.3
WP_017432258.1\|2041897_2042953_+	hypothetical protein	NA	NA	NA	NA
WP_015875914.1\|2042922_2043936_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_015875915.1\|2044743_2045682_-	nucleoside-diphosphate kinase	NA	NA	NA	NA
WP_015875916.1\|2045703_2046891_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_015875917.1\|2046992_2047967_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_015875918.1\|2047992_2049231_-	oxidoreductase-like protein	NA	NA	NA	NA
WP_015875919.1\|2049227_2049932_-	cupin domain-containing protein	NA	NA	NA	NA
WP_015875920.1\|2050121_2051180_-	zinc-binding alcohol dehydrogenase	NA	NA	NA	NA
WP_015875921.1\|2051238_2051577_-	hypothetical protein	NA	NA	NA	NA
WP_015875922.1\|2051624_2052677_-	nucleoside-diphosphate kinase	NA	NA	NA	NA
WP_015875923.1\|2052673_2055904_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	7.0e-69	22.9
WP_153477631.1\|2055943_2057449_-	MFS transporter	NA	NA	NA	NA
WP_015875925.1\|2057708_2058557_+	UDP-2,3-diacylglucosamine diphosphatase	A0A218MKA7	uncultured_virus	3.0e-19	29.1
WP_015875926.1\|2058553_2059192_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_015875927.1\|2059252_2060200_-	NAD-dependent epimerase/dehydratase family protein	M1HUT1	Acanthocystis_turfacea_Chlorella_virus	4.9e-07	22.5
WP_015875928.1\|2060196_2061516_-	vanadium-dependent haloperoxidase	NA	NA	NA	NA
WP_080569303.1\|2061715_2062522_-	thioesterase	NA	NA	NA	NA
WP_015875930.1\|2062552_2063437_-	hypothetical protein	NA	NA	NA	NA
WP_012733315.1\|2064047_2064443_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.0e-38	68.2
WP_153478200.1\|2065116_2066097_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	5.5e-118	77.1
WP_153477633.1\|2066337_2067384_+\|transposase	IS481-like element IS1419 family transposase	A0A0M3LS26	Mannheimia_phage	1.1e-148	74.2

DBSCAN-SWA_9

2176418 : 2183001

Burkholderia_virus(55.56%)

integrase

attL 2175242:2175256|attR 2185783:2185797

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2175242:2175256	attL	NA	NA	NA	NA
WP_153477690.1\|2176418_2176898_+	hypothetical protein	A0A0K2FHI1	Achromobacter_phage	7.0e-34	45.8
WP_153477691.1\|2176999_2178262_+	hypothetical protein	A6N3G8	Burkholderia_virus	7.0e-17	56.9
WP_153477693.1\|2178261_2178753_+	hypothetical protein	NA	NA	NA	NA
WP_153477695.1\|2178745_2178985_+	hypothetical protein	NA	NA	NA	NA
WP_153477696.1\|2178981_2179392_+	hypothetical protein	H2BDF1	Pseudomonas_virus	6.6e-09	47.7
WP_153477698.1\|2179388_2179763_+	DUF4031 domain-containing protein	Q6V7P5	Burkholderia_virus	1.6e-30	56.9
WP_153477700.1\|2179759_2179996_+	hypothetical protein	A9YWV8	Burkholderia_phage	3.1e-27	75.6
WP_153477702.1\|2179992_2180925_+	DUF5131 family protein	Q8W6R4	Burkholderia_virus	1.2e-119	62.0
WP_153477703.1\|2180921_2181623_+	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	3.3e-24	36.3
WP_124836408.1\|2181502_2181868_+	DUF4224 domain-containing protein	Q8W6R6	Burkholderia_virus	2.4e-10	45.3
WP_153477705.1\|2181864_2183001_+\|integrase	tyrosine-type recombinase/integrase	Q6JIJ8	Burkholderia_virus	1.5e-82	44.8
2185783:2185797	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2426454 : 2463857

uncultured_Caudovirales_phage(38.89%)

transposase,tail,plate,integrase

attL 2414867:2414885|attR 2465187:2465205

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2414867:2414885	attL	NA	NA	NA	NA
WP_153477793.1\|2426454_2427501_-\|transposase	IS481 family transposase	A0A0M3LS26	Mannheimia_phage	3.2e-148	73.9
WP_080569367.1\|2427659_2428247_-	DUF3396 domain-containing protein	NA	NA	NA	NA
WP_015876297.1\|2428690_2429740_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_015876298.1\|2429709_2430834_-	beta-ketoacyl synthase	NA	NA	NA	NA
WP_153477794.1\|2430830_2431919_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_026051330.1\|2431923_2432175_-	hypothetical protein	NA	NA	NA	NA
WP_015876300.1\|2432171_2433461_-	hypothetical protein	NA	NA	NA	NA
WP_153477796.1\|2433553_2435713_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	4.7e-61	29.4
WP_124837732.1\|2437373_2438611_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.8e-102	63.9
WP_153477798.1\|2438597_2439062_+	hypothetical protein	NA	NA	NA	NA
WP_017423135.1\|2439062_2439635_-	hypothetical protein	NA	NA	NA	NA
WP_017423134.1\|2439656_2440034_-	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_153477800.1\|2440784_2441912_-	hypothetical protein	NA	NA	NA	NA
WP_153477802.1\|2442920_2443187_-	hypothetical protein	NA	NA	NA	NA
WP_153477803.1\|2443227_2443617_+	DUF2513 domain-containing protein	A0A0H4TJ44	Erysipelothrix_phage	5.3e-08	31.5
WP_153477805.1\|2444219_2445995_+	hypothetical protein	NA	NA	NA	NA
WP_153477807.1\|2446555_2447146_+	hypothetical protein	NA	NA	NA	NA
WP_153477808.1\|2447433_2447841_+	PAAR domain-containing protein	Q8W6S2	Burkholderia_virus	4.0e-14	48.3
WP_153477810.1\|2447898_2448348_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.2e-19	44.6
WP_153477812.1\|2448695_2449277_+	hypothetical protein	NA	NA	NA	NA
WP_153477813.1\|2449281_2450010_+	hypothetical protein	A4PE26	Ralstonia_virus	6.6e-36	41.2
WP_153477815.1\|2450332_2451118_-	DNA adenine methylase	C7BGE1	Burkholderia_phage	1.7e-125	81.7
WP_153477817.1\|2452564_2452771_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	6.5e-13	55.2
WP_153477819.1\|2452745_2453624_-	oxidoreductase	A0A2H4J875	uncultured_Caudovirales_phage	9.8e-34	37.6
WP_153477821.1\|2453636_2454257_-	hypothetical protein	A0A2H4J869	uncultured_Caudovirales_phage	4.0e-05	56.8
WP_153477822.1\|2454334_2454799_-	hypothetical protein	NA	NA	NA	NA
WP_153477824.1\|2455926_2456817_-\|plate	baseplate J protein	A0A2H4JFK9	uncultured_Caudovirales_phage	3.3e-45	42.4
WP_153477825.1\|2456813_2457149_-\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	6.8e-20	44.3
WP_153477827.1\|2457412_2458663_-	hypothetical protein	NA	NA	NA	NA
WP_153477829.1\|2458765_2459446_-\|plate	phage baseplate assembly protein V	Q9JML8	Wolbachia_phage	2.7e-15	27.8
WP_153477831.1\|2459449_2459974_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	7.9e-15	32.8
WP_153477833.1\|2459963_2460494_-\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	2.0e-13	30.9
WP_153477835.1\|2460496_2460787_-	hypothetical protein	NA	NA	NA	NA
WP_153477837.1\|2460946_2461324_-	hypothetical protein	NA	NA	NA	NA
WP_153477839.1\|2461325_2461853_-	hypothetical protein	C7BGG0	Burkholderia_phage	1.2e-31	48.2
WP_153477840.1\|2461922_2462132_+	hypothetical protein	NA	NA	NA	NA
WP_153477842.1\|2462203_2462581_+	hypothetical protein	NA	NA	NA	NA
WP_153477844.1\|2462789_2463857_+\|integrase	tyrosine-type recombinase/integrase	A4PE72	Ralstonia_virus	2.9e-56	38.1
2465187:2465205	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2805986 : 2814254

Cowpox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_124837039.1\|2805986_2806793_+	alpha/beta hydrolase	P87627	Cowpox_virus	2.6e-25	30.6
WP_153477918.1\|2806863_2807787_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	1.9e-43	35.2
WP_153477920.1\|2807964_2809245_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_012734959.1\|2809333_2810236_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.1e-51	39.2
WP_153477922.1\|2810260_2810407_+	hypothetical protein	NA	NA	NA	NA
WP_153477924.1\|2810459_2810783_-	competence protein ComE	NA	NA	NA	NA
WP_012734957.1\|2810857_2811850_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	2.8e-29	32.8
WP_017922220.1\|2811904_2812885_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.9e-14	26.4
WP_153477925.1\|2812853_2814254_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	5.1e-77	36.9

DBSCAN-SWA_12

3108525 : 3117423

Pandoravirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153478026.1\|3108525_3110103_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	1.7e-23	28.4
WP_012734722.1\|3110132_3110666_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	6.2e-15	40.5
WP_012734721.1\|3110662_3111346_+	deoxynucleoside kinase	NA	NA	NA	NA
WP_012734720.1\|3111392_3112208_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	1.8e-34	30.5
WP_153478027.1\|3112236_3114087_-	chloride transporter	S4VT78	Pandoravirus	4.4e-52	37.5
WP_012734718.1\|3114103_3115240_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	1.2e-23	34.0
WP_012734717.1\|3115461_3117423_-	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	6.6e-147	50.0

DBSCAN-SWA_13

3352329 : 3413619

Leptospira_phage(25.0%)

transposase,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012734511.1\|3352329_3353616_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_012734510.1\|3353696_3354779_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	1.1e-07	43.1
WP_012734509.1\|3354799_3355648_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_012734508.1\|3355802_3356114_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_012734507.1\|3356121_3356718_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_012734506.1\|3356895_3357687_+	dioxygenase	NA	NA	NA	NA
WP_012734505.1\|3357788_3359387_-	APC family permease	NA	NA	NA	NA
WP_012734504.1\|3359821_3360025_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.4e-20	71.6
WP_012734503.1\|3360266_3361526_-	Hsp70 family protein	NA	NA	NA	NA
WP_012734502.1\|3361767_3362370_-	nitroreductase family protein	NA	NA	NA	NA
WP_012734501.1\|3362522_3363809_-	MFS transporter	NA	NA	NA	NA
WP_012734500.1\|3363973_3364588_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_012734499.1\|3364681_3365263_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_012734498.1\|3365306_3366170_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_012734497.1\|3366380_3367514_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_012734496.1\|3367684_3368170_-	water stress/hypersensitive response domain-containing protein	NA	NA	NA	NA
WP_012734495.1\|3368368_3369292_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012734494.1\|3369457_3370435_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_012734493.1\|3370476_3370629_+	DUF1427 family protein	NA	NA	NA	NA
WP_026051673.1\|3370701_3371736_-	transporter	NA	NA	NA	NA
WP_012734491.1\|3372121_3373081_-	hypothetical protein	NA	NA	NA	NA
WP_012734490.1\|3373204_3374056_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_017433311.1\|3374321_3378197_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_012734488.1\|3378193_3379186_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_012734487.1\|3379190_3380258_+	OmpA family protein	NA	NA	NA	NA
WP_012734486.1\|3380351_3381494_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_012734485.1\|3381584_3384254_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	6.1e-87	31.1
WP_124837387.1\|3384319_3385417_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_012734483.1\|3385380_3387219_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_012734482.1\|3387311_3387794_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_012734481.1\|3387871_3388375_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_012734480.1\|3388452_3389943_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_012734479.1\|3389957_3390497_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_153478072.1\|3390540_3391185_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_012734477.1\|3391554_3392172_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_012734476.1\|3392273_3393620_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_012734475.1\|3393616_3394408_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_012734474.1\|3394586_3395774_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.5e-16	38.0
WP_153478074.1\|3396296_3397343_-\|transposase	IS481-like element IS1419 family transposase	A0A0M3LS26	Mannheimia_phage	8.4e-149	74.2
WP_050811391.1\|3397793_3398426_-	hypothetical protein	NA	NA	NA	NA
WP_080569284.1\|3398422_3398716_-	DUF3380 domain-containing protein	NA	NA	NA	NA
WP_012732753.1\|3401181_3401532_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012734051.1\|3401507_3401984_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_041193252.1\|3402476_3402764_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_153478076.1\|3403603_3403981_+	hypothetical protein	NA	NA	NA	NA
WP_153478078.1\|3404007_3404658_+	hypothetical protein	NA	NA	NA	NA
WP_153478080.1\|3405232_3407992_+	lactate dehydrogenase	Q6NE04	Leptospira_phage	6.3e-119	32.6
WP_153478081.1\|3407988_3410058_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_153478083.1\|3410050_3411244_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_012732720.1\|3411323_3412121_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	4.4e-33	37.7
WP_012732721.1\|3412113_3413619_-\|transposase	IS21 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP045089

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045089_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045089_1

159917-160105

Orphan

Consensus_repeat	Method
AGACCATCGCTGGAAGAACGACACCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP045089_1

>merge|NZ_CP045089|1|159917-160105|PILER-CR
AGATCATCGTTGGAAGAACGACAGTACTGAGCAAAGAAGTTGTCTGACCATCGCTGGAGAGACGACCTCACCTTAACGGCATCGCTGGAAGAACGACACGAAATCGCTAAACCACCGTGCTGCAAGGTGAGTACACACTCTCACCCTTACGCCCGTTCCGTATAGACCATCGCTGGAAGAACGTCACCC

>NZ_CP045089|1|1|159917-160105|PILER-CR
AGATCATCGTTGGAAGAACGACAGTA	CTGAGCAAAGAAGTTGTCTGACCATCGCTGGAGAGACGACCTCACCTTAACGG
CATCGCTGGAAGAACGACACGAAATC	GCTAAACCACCGTGCTGCAAGGTGAGTACACACTCTCACCCTTACGCCCGTTCCGTATAGAC
CATCGCTGGAAGAACGTCACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045089.1\|WP_012732844.1\|144288_146145_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|271374
NZ_CP045089.1\|WP_043226181.1\|148657_149152_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381603
NZ_CP045089.1\|WP_012734036.1\|160281_161247_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|272946
NZ_CP045089.1\|WP_012734037.1\|158669_159527_-\|TrfA-family-protein	unknown	unknown	gnl\|CDD\|115680
NZ_CP045089.1\|WP_148271072.1\|146134_146485_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
NZ_CP045089.1\|WP_153479176.1\|149734_149962_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045089.1\|WP_043308436.1\|164277_164520_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045089.1\|WP_153479178.1\|156090_156990_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP045089.1\|WP_148271069.1\|165651_165969_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045089.1\|WP_043308454.1\|165186_165468_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP045089.1\|WP_043308437.1\|163233_163428_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045089.1\|WP_012732846.1\|142337_143045_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377050
NZ_CP045089.1\|WP_012732842.1\|146644_147538_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP045089.1\|WP_012734112.1\|163815_164118_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP045089.1\|WP_012734035.1\|161246_161918_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP045089.1\|WP_012734111.1\|164727_165183_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045089.1\|WP_153479195.1\|154795_155236_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045089.1\|WP_080569434.1\|143228_144263_-\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143588
NZ_CP045089.1\|WP_012734113.1\|163580_163826_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|281658
NZ_CP045089.1\|WP_017924445.1\|166225_166510_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045089.1\|WP_012732844.1\|144288_146145_-\|cation-acetate-symporter	gnl\|CDD\|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	1.17029e-153
NZ_CP045089.1\|WP_043226181.1\|148657_149152_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381603	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	6.60334e-42
NZ_CP045089.1\|WP_012734036.1\|160281_161247_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|272946	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein. This model represents the most well-conserved core of a set of chromosomal and plasmid partition proteins related to ParB, including Spo0J, RepB, and SopB. Spo0J has been shown to bind a specific DNA sequence that, when introduced into a plasmid, can serve as partition site. Study of RepB, which has nicking-closing activity, suggests that it forms a transient protein-DNA covalent intermediate during the strand transfer reaction.	6.24796e-18
NZ_CP045089.1\|WP_012734037.1\|158669_159527_-\|TrfA-family-protein	gnl\|CDD\|115680	pfam07042, TrfA, TrfA protein. This family consists of several bacterial TrfA proteins. The trfA operon of broad-host-range IncP plasmids is essential to activate the origin of vegetative replication in diverse species. The trfA operon encodes two ORFs. The first ORF is highly conserved and encodes a putative single-stranded DNA binding protein (Ssb). The second, trfA, contains two translational starts as in the IncP alpha plasmids, generating related polypeptides of 406 (TrfA1) and 282 (TrfA2) amino acids. TrfA2 is very similar to the IncP alpha product, whereas the N-terminal region of TrfA1 shows very little similarity to the equivalent region of IncP alpha TrfA1. This region has been implicated in the ability of IncP alpha plasmids to replicate efficiently in Pseudomonas aeruginosa.	2.47361e-32
NZ_CP045089.1\|WP_148271072.1\|146134_146485_-\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	8.09387e-13
NZ_CP045089.1\|WP_012734112.1\|163815_164118_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	2.53105e-15
NZ_CP045089.1\|WP_043308454.1\|165186_165468_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	5.31566e-06
NZ_CP045089.1\|WP_012732846.1\|142337_143045_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|377050	pfam03472, Autoind_bind, Autoinducer binding domain. This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules.	1.57983e-33
NZ_CP045089.1\|WP_012732842.1\|146644_147538_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.07163e-30
NZ_CP045089.1\|WP_012734035.1\|161246_161918_-\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.57976e-25
NZ_CP045089.1\|WP_080569434.1\|143228_144263_-\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143588	cd07564, nitrilases_CHs, Nitrilases, cyanide hydratase (CH)s, and similar proteins (class 1 nitrilases). Nitrilases (nitrile aminohydrolases, EC:3.5.5.1) hydrolyze nitriles (RCN) to ammonia and the corresponding carboxylic acid. Most nitrilases prefer aromatic nitriles, some prefer arylacetonitriles and others aliphatic nitriles. This group includes the nitrilase cyanide dihydratase (CDH), which hydrolyzes inorganic cyanide (HCN) to produce formate. It also includes cyanide hydratase (CH), which hydrolyzes HCN to formamide. This group includes four Arabidopsis thaliana nitrilases (Ath)NIT1-4. AthNIT1-3 have a strong substrate preference for phenylpropionitrile (PPN) and other nitriles which may originate from the breakdown of glucosinolates. The product of PPN hydrolysis, phenylacetic acid has auxin activity. AthNIT1-3 can also convert indoacetonitrile to indole-3-acetic acid (IAA, auxin), but with a lower affinity and velocity. From their expression patterns, it has been speculated that NIT3 may produce IAA during the early stages of germination, and that NIT3 may produce IAA during embryo development and maturation. AthNIT4 has a strong substrate specificity for the nitrile, beta-cyano-L-alanine (Ala(CN)), an intermediate of cyanide detoxification. AthNIT4 has both a nitrilase activity and a nitrile hydratase (NHase) activity, which generate aspartic acid and asparagine respectively from Ala(CN). NHase catalyzes the hydration of nitriles to their corresponding amides. This subgroup belongs to a larger nitrilase superfamily comprised of belong to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 1.	1.65635e-153
NZ_CP045089.1\|WP_012734113.1\|163580_163826_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|281658	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH. ParD is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is ParE in, pfam05016. The family contains several related antitoxins from Cyanobacteria, Proteobacteria and Actinobacteria. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all type II antitoxins.	8.55369e-29

>NZ_CP045089.1|WP_012734037.1|158669_159527_-|TrfA-family-protein
MANSIVDQVKAIAARASSAGVETQSYPTQIPLWPANVRGMPNALARSALFNVNKSNAPRSRMEKALIASVDGVEISFSGEELRQDDADVFLEVLHLARDTQLNEKVEFTGYSVLKSLGWGTSVKCYDRLVTTLERLQAGQVKVRFVGNKKGFVGSLIRKFLWKEGTETGTDGKTRWVAYVEPEIVALFSDDDYTRLAREQRQRLRYELSKWLHTYYHTHAVPFAHSVRFLHRQCGSQTKELFHFRANLKKALDELVKEGFLVSWTIDKNDLVHVVRASSRGAIAA
>NZ_CP045089.1|WP_153479178.1|156090_156990_+|Crp/Fnr-family-transcriptional-regulator
MTRSPFGLQPANPAALPCSATDDGGDVPPAAIAHARSRAAALSERVWPADIPCPAPANSPRLLRELKLRLGRYLDTPQAWLPALNAANGSRRQQRSERRVACVQLVRALIKFCDLSTLRVAVPSKGAWIDFTLPYLAEQAGLPVRRAERALRDLVRARLVKSRPQCELQVDEQGPRYRCLAAIRYLSPALFEQFGLGKWLRHERTRAHLRAQRRRDAARKRERKHGAAAGAGQLLEQLTTKLAAAQARAKTRDDHGGVDRRAEFERAVMIRVGQLKEMHPDWDRDQCFRVARSQLSPPG
>NZ_CP045089.1|WP_153479195.1|154795_155236_+|hypothetical-protein
MTRNQHDPRNSGPASMRRATKSPRANLTVAEVAATMRPGVTYTTSRLAGKLGVPVSAMRHLLSCDVALARFDLHSGPTGRAYSLAGTRRAPDAHVDTRVRPDLSSNLTGYMRGLDTHRALAMTTRGSPTPRRASLQAAPRRFMKSR
>NZ_CP045089.1|WP_153479176.1|149734_149962_+|hypothetical-protein
MIANAVSQLEIRLALRLIALEDRAQPDVDRATAADAKRKALIALRDDLRPNDPEAIERVLAVHGPRAQQLNANRG
>NZ_CP045089.1|WP_043226181.1|148657_149152_+|lytic-transglycosylase-domain-containing-protein
MVGGIVGFVALAAHFSSTASASVCHGDPFVAAAAIYQLDPDLLRAITWVESRGIPSAVGPKLSGGHRAWGAAQINDIHLPELVSYGVTREDLLDPCVNLKLSAWVLANCIRSKGATWAAVGCYNAGPASSNTTAQAKYVRLVQRAYAGYRAQSAAAMSASGRAK
>NZ_CP045089.1|WP_012732842.1|146644_147538_+|LysR-family-transcriptional-regulator
MNVNRLNWNHLRVFLVLGRTGSLSQTGRLLGIDHATASRRISALEHDMGTPLFERDPTGYRLNAQGRSIFEHIESVEASVLAAASQLAGGEIAPSGTVRIATMEGIASLYLSEQFVRLKRTTPGIVIELVTSSRDVRVTHREADIFLGFFKPPGKNLHAVKIGEFSCHLYGSQDYFARRGTPTSVAELPEHEFAGYIDELIQLDIVRWLEEGVANPTYSFHSSSMLSQMFAAAAGAGLVMLPAFSRPERFGLYPVLLGEINVRREVWMSTLVNFQRVPSINVVLSFLTSTFARDYPA
>NZ_CP045089.1|WP_148271072.1|146134_146485_-|DUF485-domain-containing-protein
MTEMSYQRHEWCEVLADPRFRLIAQKRRKTIVAIGAIAAFYYFAIPAVIAWAPALFAIRLTGGFNVGVAFAISQYPVGGVLCWVFMRSMARLDLERQALLSSGDSAFDGCEVSHGN
>NZ_CP045089.1|WP_012732844.1|144288_146145_-|cation-acetate-symporter
MGIDRLRRCAATVLALAASSAYANGASGIVQHQQLTMLAFAMVILATIAITIFASRRASTAGDFYTAGGSIGPLRNGLAIAGDYLSAAAFLGASGLIALYGFDGMIYLVGFFAAFIPVLLFIAEPCRNLGRFTIGDVLVVRNSYKATKVASALSSVVVALAYMIPQIVGGAVIVRALVGIDYTISVLAVGVLMLVYVACGGMRATTWVQVIKAVLLIGASLILVVLAWIPFGFHVPTFMKAVVNSPMVQARVAEMAAGASLSGDALGWRFLEPGLFLTKPLELFSLGLALVLGTAAMPHVLMRFFTVRDATAARHSVLWAMFGIGLCHLCIIVIGFAAAYYVGAGKIMLTDKGGNLAAPLLAQTLSGGASSVAGDLMLAFVAAVAFATIVAVIAGLTLAAASSLAHDVYVGAWRSGRATEREQVAAARIATVLVGVVAISVSVALQGQNVAQLVGLGYAVAASANLPALMLTLYWRRCTTQGVLAGIIGGTLAAVALVMVSPNMEYPALERASAIHRVQDLTGKLSNAADDKSRTVLRRELIDAETVVQMMPAKETSIVGLRAPLIGLRNPGIVSIPIGFLLVVLISLFTRDRVSESRWAELVVRRETAIGAAVATNH
>NZ_CP045089.1|WP_080569434.1|143228_144263_-|carbon-nitrogen-hydrolase-family-protein
MSTLPVVKVAAAHVAPVFLDRAATVAKAVNLIREARSAGAELIVFPESFIPAFPVWASLWAPIDNHQLFERFVAASIYADGPEIAEIRAEAERSGIFVSLGFSERSRASVGCLWNSNLLIDDRGAVLNHHRKLVPTFFEKLVWAPGDGHGLRVADTRIGRVGGLICGENTNPLARYTLIAQGEQIHISSWPALWPTRRPDTGGNYDNVAANRIRAGAHSFEAKAFGIMCAGYMDTPMRDALLKVDPSVAEVLDGSPRAATMFVDPTGTPIGDTLSADEGIAYAEMDLAKCVEPKQFHDVVGYYNRYDVFSLNVNRTRQEPIRWTDAEGASRADSSENTFPTPVP
>NZ_CP045089.1|WP_012732846.1|142337_143045_-|LuxR-family-transcriptional-regulator
MFSPIDVAHDICSSDSSRVVFDKLVGYASQLGFDYCCYGFRSPLPVGGESVKVFDNYPNGWMEHYRHMGYIDVDPTVEKAMTCSQTICWPGFDESKQSAFWQDARDHGLKVGIAQPSWSARGAFGLLSLARGEGEIDGHELKRLSLQLSWITNAVHSAMTAHVFDSLGLGAAISLTERERQVLRWTVEGLNAFDISEKLNISVSTVNWHIGKVLAKFGATNKVQAAARAVALNLL
>NZ_CP045089.1|WP_012734036.1|160281_161247_-|ParB/RepB/Spo0J-family-partition-protein
MATFKKKTVAVERVAAVEDAASMAPIVGDPRMAPPVPSNSQLRGIEVGSSQETARYEIGQTYEVPVGKIKSNSVNPRAIYTASSVSEMAESLAARGQGQSASAYQDEAGDLVLIDGERRLRGARTAGLPTLRLEIRPRPASERELYEEARAANVERKDQSPLDDAIKWKELISRKIYPTQAALAKALKLGEDHVSRTLSLAQLPSKIVQAAAEYPELLSLKMLNAIREFWEVKGEEETLDLISEAAKSGMGYRDVSARRKAAAKGTIRRPRSTREQLTFRGAKGEFKSFEEDGRIELKLKGLAPDVAAEISEKILALFPKE
>NZ_CP045089.1|WP_012734035.1|161246_161918_-|AAA-family-ATPase
MVITIGAEKGGVAKTRLATHIAALAAAEDVDVVLLDTDKQGSAMSWSRIRNEEGVTPAIPVLALPANPARELANLANKYTLVVVDIGAQNYRTMLECALLSDLVLVPCGPDQQEVESTLNVFATLKDMGPRHESGEIPAYVVLTRVSPVEGSKATAELRAYLKSEDIRLFDSQIPQREAWRATGKTGRAVHELKGRDRSKKAIDEMEAVYREIIERINGAEVK
>NZ_CP045089.1|WP_043308437.1|163233_163428_+|hypothetical-protein
MLERLLRLLTAVDRLIVTADRHPAGARRVTQLAQLARLGCAGVGLAVLLAALELGRSALALAGG
>NZ_CP045089.1|WP_012734113.1|163580_163826_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MPRNTSISLGDHLTQFVDTQVASGRYGSASDVVRAGLRLLETQETELKALKEALRASEASGAPAAFDGQAFLDRMRAKHAG
>NZ_CP045089.1|WP_012734112.1|163815_164118_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRGKARVVRLTPLAEADLEDIWAYIFEQWSLAQAEQYVGEIVAAFNRLARGEWVGAVRGEPYRRYLVGFHAVFYRETTDALDVACVRHQRMDVGSHLSQY
>NZ_CP045089.1|WP_043308436.1|164277_164520_+|hypothetical-protein
MNDTSVAARPTGDVLADEAAAVGFAREYVVSAGVPAGHHRTAREHAARWFRLYAGQPELLTTMALEGSLTRVFAGFCEHR
>NZ_CP045089.1|WP_012734111.1|164727_165183_+|hypothetical-protein
MQLLTLEQLRATQEAGGVVAVTLHGDGAAFEVQVETRRGAATLVKARKARSAPEVRRFADPRKALLLLRELGINEARIDSQQWRPEEQPEARVTRPDRAAHLRAAHEALSYGDWLQHKVDGARAGLADGSNAQYTNEQWAAIRAAKRAQRG
>NZ_CP045089.1|WP_043308454.1|165186_165468_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MATKIVRRTTSYHADLNAIEAYIAQDSPQAGLEMWLLIDEQVDRLSDSKFPRRIGRVEGTFELVAHENYIVILLEDATTVTALNVVHARRQYP
>NZ_CP045089.1|WP_148271069.1|165651_165969_+|hypothetical-protein
MPYDATAEFDRIRREVGILETAQPDRAVKVRLARTSGSRSRTEEAVLFRITLRYVAREPELWVVLADARLGLAFERRWSPADMELANGGIRRAGVWPRVDFVDAR
>NZ_CP045089.1|WP_017924445.1|166225_166510_+|hypothetical-protein
MPHRQMLTARHLTDRTESCIRECLADAERSLYPNRKQMYQDFANGAFVLWNRLMQDWVDPADPLAVEAFESDQARLNALIGEAAPPAGPAPSSD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045089_1	1.1\|159943\|53\|NZ_CP045089\|PILER-CR	159943-159995	53	NC_012723	Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence	2025-2077	0	1.0
NZ_CP045089_1	1.1\|159943\|53\|NZ_CP045089\|PILER-CR	159943-159995	53	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	47992-48044	0	1.0
NZ_CP045089_1	1.1\|159943\|53\|NZ_CP045089\|PILER-CR	159943-159995	53	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	205559-205611	0	1.0
NZ_CP045089_1	1.1\|159943\|53\|NZ_CP045089\|PILER-CR	159943-159995	53	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	159943-159995	0	1.0
NZ_CP045089_1	1.2\|160022\|62\|NZ_CP045089\|PILER-CR	160022-160083	62	NC_012723	Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence	1941-2002	2	0.968
NZ_CP045089_1	1.2\|160022\|62\|NZ_CP045089\|PILER-CR	160022-160083	62	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	47908-47969	2	0.968
NZ_CP045089_1	1.2\|160022\|62\|NZ_CP045089\|PILER-CR	160022-160083	62	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	205634-205695	2	0.968
NZ_CP045089_1	1.2\|160022\|62\|NZ_CP045089\|PILER-CR	160022-160083	62	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	160018-160079	2	0.968

1. spacer 1.1|159943|53|NZ_CP045089|PILER-CR matches to NC_012723 (Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	CRISPR spacer
ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	Protospacer
*****************************************************

2. spacer 1.1|159943|53|NZ_CP045089|PILER-CR matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	CRISPR spacer
ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	Protospacer
*****************************************************

3. spacer 1.1|159943|53|NZ_CP045089|PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	CRISPR spacer
ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	Protospacer
*****************************************************

4. spacer 1.1|159943|53|NZ_CP045089|PILER-CR matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	CRISPR spacer
ctgagcaaagaagttgtctgaccatcgctggagagacgacctcaccttaacgg	Protospacer
*****************************************************

5. spacer 1.2|160022|62|NZ_CP045089|PILER-CR matches to NC_012723 (Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence) position: , mismatch: 2, identity: 0.968

aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	CRISPR spacer
aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	Protospacer
************************************************************

6. spacer 1.2|160022|62|NZ_CP045089|PILER-CR matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 2, identity: 0.968

aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	CRISPR spacer
aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	Protospacer
************************************************************

7. spacer 1.2|160022|62|NZ_CP045089|PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 2, identity: 0.968

aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	CRISPR spacer
aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	Protospacer
************************************************************

8. spacer 1.2|160022|62|NZ_CP045089|PILER-CR matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 2, identity: 0.968

aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	CRISPR spacer
aatcgctaaaccaccgtgctgcaaggtgagtacacactctcacccttacgcccgttccgt	Protospacer
************************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1654 : 58772

Mycobacterium_phage(23.53%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045678676.1\|1654_2674_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153479163.1\|2876_3692_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.2e-25	35.0
WP_017924798.1\|4037_4589_+	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_012732724.1\|6106_7690_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-11	37.6
WP_012732723.1\|8556_10254_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.4e-12	43.0
WP_039204250.1\|10429_12154_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	5.1e-10	51.9
WP_080569430.1\|12372_12861_+	hypothetical protein	NA	NA	NA	NA
WP_045678677.1\|13303_13498_+	hypothetical protein	NA	NA	NA	NA
WP_012734076.1\|14417_15977_+	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	5.1e-41	47.6
WP_012734051.1\|16865_17342_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_012732753.1\|17317_17668_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012732752.1\|18169_19726_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	4.1e-67	34.0
WP_012732753.1\|19757_20108_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012734051.1\|20083_20560_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_039202049.1\|22587_25275_-	hybrid sensor histidine kinase/response regulator	Q6XLV6	Feldmannia_irregularis_virus	6.7e-17	25.4
WP_012734079.1\|25271_26051_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.8e-16	33.1
WP_017423070.1\|26270_27008_-	response regulator transcription factor	NA	NA	NA	NA
WP_124837819.1\|28699_30187_+	hypothetical protein	NA	NA	NA	NA
WP_012734082.1\|30282_32130_+	peptidase C11	NA	NA	NA	NA
WP_085962449.1\|32308_33113_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	6.2e-27	34.4
WP_080569432.1\|33983_34124_+\|integrase	integrase	NA	NA	NA	NA
WP_017924497.1\|34865_35153_-	hypothetical protein	NA	NA	NA	NA
WP_012734085.1\|35350_35851_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_012734086.1\|36210_37758_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.9e-19	32.5
WP_012734087.1\|38819_39479_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_012734088.1\|39581_40364_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_085962450.1\|40510_41316_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	5.1e-29	35.8
WP_012734091.1\|42181_42436_+	antitoxin	NA	NA	NA	NA
WP_039203971.1\|42426_42837_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_017925051.1\|42899_43217_+	hypothetical protein	NA	NA	NA	NA
WP_080763664.1\|43251_43632_+	hypothetical protein	NA	NA	NA	NA
WP_039203972.1\|43628_45452_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_017925019.1\|45494_45704_+	hypothetical protein	NA	NA	NA	NA
WP_124837551.1\|45919_46603_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	8.2e-20	32.8
WP_039203083.1\|47009_49517_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_085962421.1\|50006_50812_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.9e-29	35.1
WP_017924909.1\|53348_53885_+	hypothetical protein	NA	NA	NA	NA
WP_012735336.1\|53897_54149_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_012732753.1\|56126_56477_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_012734051.1\|56452_56929_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_153479165.1\|57534_58772_-\|transposase	IS3-like element IS1416 family transposase	Q8W6R2	Burkholderia_virus	9.2e-155	94.4

DBSCAN-SWA_2

94751 : 169284

Pseudomonas_phage(15.38%)

transposase,holin,integrase

attL 121328:121343|attR 169294:169309

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_124837732.1\|94751_95988_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.8e-102	63.9
WP_153479167.1\|96155_97478_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_017923352.1\|100182_101100_-	phenol degradation protein	NA	NA	NA	NA
WP_051071153.1\|101593_103252_+	CocE/NonD family hydrolase	NA	NA	NA	NA
WP_012732753.1\|105085_105436_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.1e-16	39.4
WP_039203908.1\|105411_105888_-\|transposase	transposase	NA	NA	NA	NA
WP_012732755.1\|106116_107169_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012732756.1\|107313_108735_+	coniferyl aldehyde dehydrogenase	NA	NA	NA	NA
WP_012732757.1\|108761_110462_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	5.9e-59	32.3
WP_012732758.1\|110448_112914_+	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA
WP_039203994.1\|113445_114912_-	AAA family ATPase	A0A126DN25	Acinetobacter_phage	3.5e-60	32.4
WP_085962346.1\|115306_116123_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	4.5e-25	34.6
WP_085967323.1\|117314_117644_+	H-NS histone family protein	F8TUP5	EBPR_podovirus	3.6e-05	32.0
WP_017432678.1\|117652_117916_+	hypothetical protein	NA	NA	NA	NA
WP_017432679.1\|118587_119613_+	ParA family protein	Q56VQ0	Pseudomonas_phage	5.0e-106	60.8
WP_039203079.1\|119618_120227_+	hypothetical protein	NA	NA	NA	NA
WP_017432681.1\|120656_121043_-	hypothetical protein	NA	NA	NA	NA
WP_153479169.1\|121042_121519_-	hypothetical protein	NA	NA	NA	NA
121328:121343	attL	NA	NA	NA	NA
WP_153479171.1\|121968_124890_+	conjugative relaxase	A0A1P8DII4	Virus_Rctr197k	3.1e-07	28.8
WP_080942737.1\|124979_125450_-	ProQ activator of osmoprotectant transporter prop	NA	NA	NA	NA
WP_080942736.1\|125542_126037_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_045678699.1\|126033_126315_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_042967384.1\|127210_127492_+	virulence factor	NA	NA	NA	NA
WP_017432519.1\|127648_128728_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_045678698.1\|128774_129494_-	hypothetical protein	NA	NA	NA	NA
WP_153479173.1\|129515_131741_-	hypothetical protein	NA	NA	NA	NA
WP_042967381.1\|131758_132937_-	metallohydrolase	NA	NA	NA	NA
WP_012732871.1\|133930_134797_-	ATPase AAA	U5N3V8	Enterobacteria_phage	2.8e-49	44.1
WP_017432522.1\|134793_136050_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	7.7e-48	33.0
WP_127913919.1\|137015_137342_-	hypothetical protein	NA	NA	NA	NA
WP_153479174.1\|137338_142024_-	sugar-binding protein	A0A2H4JFP5	uncultured_Caudovirales_phage	3.6e-50	49.8
WP_012732846.1\|142337_143045_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_080569434.1\|143228_144263_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_012732844.1\|144288_146145_-	cation acetate symporter	NA	NA	NA	NA
WP_148271072.1\|146134_146485_-	DUF485 domain-containing protein	NA	NA	NA	NA
WP_012732842.1\|146644_147538_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043226181.1\|148657_149152_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_153479176.1\|149734_149962_+	hypothetical protein	NA	NA	NA	NA
WP_153479195.1\|154795_155236_+	hypothetical protein	A9YWZ0	Burkholderia_phage	1.6e-24	63.0
WP_153479178.1\|156090_156990_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_012734037.1\|158669_159527_-	TrfA family protein	NA	NA	NA	NA
WP_012734036.1\|160281_161247_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_012734035.1\|161246_161918_-	AAA family ATPase	A0A222YXS3	Escherichia_phage	1.4e-16	30.7
WP_043308437.1\|163233_163428_+	hypothetical protein	NA	NA	NA	NA
WP_012734113.1\|163580_163826_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_012734112.1\|163815_164118_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_043308436.1\|164277_164520_+	hypothetical protein	NA	NA	NA	NA
WP_012734111.1\|164727_165183_+	hypothetical protein	NA	NA	NA	NA
WP_043308454.1\|165186_165468_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_148271069.1\|165651_165969_+	hypothetical protein	NA	NA	NA	NA
WP_017924445.1\|166225_166510_+	hypothetical protein	NA	NA	NA	NA
WP_017924444.1\|166522_166762_+	hypothetical protein	NA	NA	NA	NA
WP_153479180.1\|166758_167004_+	hypothetical protein	NA	NA	NA	NA
WP_039204389.1\|167104_167446_+	hypothetical protein	NA	NA	NA	NA
WP_153479182.1\|167448_169284_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
169294:169309	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045090

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045088

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP045087

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP045089

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection