CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP021868	Halomonas sp. AM6	0 crisprs	cas3,DinG,DEDDh,csa3,WYL	0	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1503905 : 1557657

Staphylococcus_phage(25.0%)

integrase,transposase

attL 1505770:1505829|attR 1557672:1558928

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153635464.1\|1503905_1504916_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.7e-43	33.8
1505770:1505829	attL	NA	NA	NA	NA
WP_153636741.1\|1505843_1507017_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	5.0e-110	60.7
WP_136938088.1\|1507314_1507830_-	flavin reductase family protein	NA	NA	NA	NA
WP_153635465.1\|1508112_1509147_-	methionine synthase	NA	NA	NA	NA
WP_153635466.1\|1509242_1510232_-	DUF1852 family protein	NA	NA	NA	NA
WP_153636818.1\|1510781_1512653_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_043336840.1\|1513158_1514955_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_153635467.1\|1515039_1515816_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_153635468.1\|1516080_1517121_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_153635469.1\|1517250_1518183_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_153636819.1\|1518476_1518917_-	META domain-containing protein	NA	NA	NA	NA
WP_153635470.1\|1519133_1520129_+	ion transporter	NA	NA	NA	NA
WP_153635471.1\|1520343_1521381_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_153635472.1\|1521652_1522972_+	ergothioneine biosynthesis protein EgtB	NA	NA	NA	NA
WP_153635473.1\|1523062_1523404_+	DUF427 domain-containing protein	NA	NA	NA	NA
WP_153636820.1\|1523692_1524430_+	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	5.2e-28	31.4
WP_153635474.1\|1524489_1525782_-	HipA domain-containing protein	NA	NA	NA	NA
WP_084589588.1\|1525778_1526021_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_153635475.1\|1526466_1529079_-	hypothetical protein	NA	NA	NA	NA
WP_153635476.1\|1529075_1531565_-	hypothetical protein	NA	NA	NA	NA
WP_153635477.1\|1533162_1533606_-	hypothetical protein	NA	NA	NA	NA
WP_153635464.1\|1533718_1534729_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.7e-43	33.8
WP_043335828.1\|1535062_1536010_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153635478.1\|1536344_1537910_-	DEAD/DEAH box helicase family protein	A0A291LA02	Bordetella_phage	7.6e-05	28.1
WP_153635479.1\|1537906_1538680_-	hypothetical protein	NA	NA	NA	NA
WP_153635480.1\|1539352_1539943_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_153635481.1\|1540147_1540534_-	DUF1360 domain-containing protein	NA	NA	NA	NA
WP_153635482.1\|1540637_1541750_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_153635483.1\|1541746_1542418_-	cupin domain-containing protein	NA	NA	NA	NA
WP_153635484.1\|1542621_1543563_+	transcriptional regulator GcvA	NA	NA	NA	NA
WP_153635485.1\|1543737_1544733_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153635486.1\|1544958_1546083_+	phosphotransferase	NA	NA	NA	NA
WP_153635487.1\|1546082_1547417_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_153635488.1\|1547816_1549844_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.1e-11	31.0
WP_172978637.1\|1550203_1551082_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_153636821.1\|1551322_1551997_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153635490.1\|1553072_1554065_-	nucleoid-associated protein	L7TI92	Pseudomonas_virus	7.1e-89	52.3
WP_153635491.1\|1554235_1554388_-\|transposase	transposase	NA	NA	NA	NA
WP_153636741.1\|1556482_1557657_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	5.0e-110	60.7
1557672:1558928	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage