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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043068 Bordetella holmesii strain J708 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 8 0

Results visualization

1. NZ_CP043068
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095221 : 1202010 96 Ralstonia_virus(16.67%) protease,tRNA,transposase NA
DBSCAN-SWA_2 1206797 : 1263203 44 Ralstonia_virus(23.08%) protease,tRNA,transposase NA
DBSCAN-SWA_3 1586741 : 1693004 100 Leptospira_phage(14.29%) tRNA,integrase,transposase attL 1644016:1644032|attR 1689682:1689698
DBSCAN-SWA_4 1711298 : 1755225 37 Leptospira_phage(33.33%) tRNA,integrase,transposase,holin attL 1753793:1753807|attR 1760269:1760283
DBSCAN-SWA_5 1780501 : 1821893 38 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_6 2150106 : 2210229 59 Ralstonia_virus(23.08%) protease,tRNA,transposase NA
DBSCAN-SWA_7 2305358 : 2426878 106 Leptospira_phage(15.15%) protease,tRNA,integrase,transposase attL 2336888:2336947|attR 2358194:2358443
DBSCAN-SWA_8 2936321 : 3013381 56 Ralstonia_virus(21.43%) tRNA,integrase,transposase attL 2939176:2939235|attR 2987763:2988333
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage