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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043080 Bordetella holmesii strain J312 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 8 0

Results visualization

1. NZ_CP043080
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095226 : 1202015 96 Ralstonia_virus(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_2 1206802 : 1261894 44 Ralstonia_virus(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_3 1585432 : 1691694 100 Leptospira_phage(14.29%) tRNA,transposase,integrase attL 1642707:1642723|attR 1688373:1688389
DBSCAN-SWA_4 1709988 : 1753915 37 Leptospira_phage(33.33%) tRNA,holin,transposase,integrase attL 1752483:1752497|attR 1758959:1758973
DBSCAN-SWA_5 1779191 : 1820583 39 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_6 2148795 : 2208918 59 Ralstonia_virus(23.08%) tRNA,transposase,protease NA
DBSCAN-SWA_7 2304052 : 2425563 106 Leptospira_phage(15.15%) tRNA,transposase,protease,integrase attL 2335582:2335641|attR 2356889:2357163
DBSCAN-SWA_8 2935018 : 3012078 56 Ralstonia_virus(21.43%) tRNA,transposase,integrase attL 2937873:2937932|attR 2986460:2987030
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage