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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043134 Bordetella holmesii strain H629 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 9 0

Results visualization

1. NZ_CP043134
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095286 : 1202075 96 Ralstonia_virus(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_2 1206862 : 1263268 44 Ralstonia_virus(23.08%) transposase,protease,tRNA NA
DBSCAN-SWA_3 1586806 : 1693062 100 Leptospira_phage(14.29%) transposase,tRNA,integrase attL 1644081:1644097|attR 1689747:1689763
DBSCAN-SWA_4 1711356 : 1755283 37 Leptospira_phage(33.33%) transposase,holin,tRNA,integrase attL 1753851:1753865|attR 1760327:1760341
DBSCAN-SWA_5 1780559 : 1821950 39 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_6 2150163 : 2210286 59 Ralstonia_virus(23.08%) transposase,protease,tRNA NA
DBSCAN-SWA_7 2280751 : 2339715 51 Leptospira_phage(18.18%) transposase,tRNA,integrase attL 2281574:2281633|attR 2337784:2337857
DBSCAN-SWA_8 2355940 : 2390192 31 Leptospira_phage(22.22%) transposase,protease NA
DBSCAN-SWA_9 2936384 : 3013444 56 Ralstonia_virus(21.43%) transposase,tRNA,integrase attL 2939239:2939298|attR 2987826:2988396
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage