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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043136 Bordetella holmesii strain H620 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 8 0

Results visualization

1. NZ_CP043136
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095327 : 1202116 96 Ralstonia_virus(16.67%) protease,transposase,tRNA NA
DBSCAN-SWA_2 1206903 : 1263309 45 Ralstonia_virus(23.08%) protease,transposase,tRNA NA
DBSCAN-SWA_3 1586846 : 1693102 100 Leptospira_phage(14.29%) transposase,integrase,tRNA attL 1644121:1644137|attR 1689787:1689803
DBSCAN-SWA_4 1711396 : 1755323 37 Leptospira_phage(33.33%) holin,transposase,integrase,tRNA attL 1753891:1753905|attR 1760367:1760381
DBSCAN-SWA_5 1780599 : 1821990 39 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_6 2150204 : 2210327 59 Ralstonia_virus(23.08%) protease,transposase,tRNA NA
DBSCAN-SWA_7 2305456 : 2426967 106 Leptospira_phage(15.15%) protease,transposase,integrase,tRNA attL 2336986:2337045|attR 2358293:2358567
DBSCAN-SWA_8 2936426 : 3013486 56 Ralstonia_virus(21.43%) transposase,integrase,tRNA attL 2939281:2939340|attR 2987868:2988438
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage