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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043148 Bordetella holmesii strain H387 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 8 0

Results visualization

1. NZ_CP043148
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095295 : 1202084 96 Ralstonia_virus(16.67%) protease,transposase,tRNA NA
DBSCAN-SWA_2 1206871 : 1263277 44 Ralstonia_virus(23.08%) protease,transposase,tRNA NA
DBSCAN-SWA_3 1586815 : 1693071 100 Leptospira_phage(14.29%) transposase,integrase,tRNA attL 1644090:1644106|attR 1689756:1689772
DBSCAN-SWA_4 1711365 : 1755292 37 Leptospira_phage(33.33%) transposase,integrase,tRNA,holin attL 1753860:1753874|attR 1760336:1760350
DBSCAN-SWA_5 1780568 : 1821959 39 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_6 2150174 : 2210297 59 Ralstonia_virus(23.08%) transposase,tRNA,protease NA
DBSCAN-SWA_7 2305420 : 2426933 105 Leptospira_phage(12.5%) protease,transposase,integrase,tRNA attL 2336950:2337009|attR 2358257:2358531
DBSCAN-SWA_8 2936393 : 3013453 56 Ralstonia_virus(21.43%) transposase,tRNA,integrase attL 2939248:2939307|attR 2987835:2988405
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage