CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0
NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	1 crisprs	csa3	2	0
NZ_CP045723	Pantoea eucalypti strain LMG 24197 plasmid unnamed3, complete sequence	0 crisprs	NA	0	1
NZ_CP045720	Pantoea eucalypti strain LMG 24197 chromosome, complete genome	1 crisprs	DEDDh,cas3,DinG	1	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045721_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045721_1

177816-177987

Orphan

Consensus_repeat	Method
AAACATTCACTGTAATCAGTAGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP045721_1

>merge|NZ_CP045721|1|177816-177987|PILER-CR
AACATTCACTGTTATCAGTAGCCGACGCAACAACTCGTCTATTCTCTCAACAAAGATTCACTGTATTCAGTAGAACGTTCACTGTAATCAGCAGGACGTCGCTGCTCAATCATAGCAACCTGGACTGCCCTGAATGGGGCTTCAGGTATAAACGTTCACTGTAATCAGTAGA

>NZ_CP045721|1|1|177816-177987|PILER-CR
AACATTCACTGTTATCAGTAGCC	GACGCAACAACTCGTCTATTCTCTCAACA
AAGATTCACTGTATTCAGTAGAA	CGTTCACTGTAATCAGCAGGACGTCGCTGCTCAATCATAGCAACCTGGACTGCCCTGAATGGGGCTTCAGGTATA
AACGTTCACTGTAATCAGTAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045721.1\|WP_003855850.1\|184239_184788_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP045721.1\|WP_003855845.1\|178515_179445_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	unknown
NZ_CP045721.1\|WP_140915535.1\|174720_175692_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|370113
NZ_CP045721.1\|WP_003855844.1\|175699_176899_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|376033
NZ_CP045721.1\|WP_140915533.1\|181277_182456_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP045721.1\|WP_140915537.1\|162022_163216_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP045721.1\|WP_003848232.1\|161341_161734_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319918
NZ_CP045721.1\|WP_140915532.1\|182549_183779_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP045721.1\|WP_003848221.1\|171580_173032_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917
NZ_CP045721.1\|WP_105099616.1\|169752_171252_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP045721.1\|WP_140915536.1\|163301_167852_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|137505
NZ_CP045721.1\|WP_140915531.1\|187568_188756_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349882
NZ_CP045721.1\|WP_105099615.1\|167803_168763_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP045721.1\|WP_008924462.1\|168858_169713_+\|aldo/keto-reductase-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236676
NZ_CP045721.1\|WP_003855849.1\|183900_184239_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119344
NZ_CP045721.1\|WP_003848235.1\|160673_161291_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|274926
NZ_CP045721.1\|WP_105099618.1\|185991_186711_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153233
NZ_CP045721.1\|WP_140915534.1\|179903_181274_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|184426
NZ_CP045721.1\|WP_140915543.1\|185564_185888_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NZ_CP045721.1\|WP_033742884.1\|184914_185568_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215

Protein	Function_ID	Function_description	E-value
NZ_CP045721.1\|WP_003855850.1\|184239_184788_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.03878e-11
NZ_CP045721.1\|WP_140915535.1\|174720_175692_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|370113	pfam08775, ParB, ParB family. ParB is a component of the par system which mediates accurate DNA partition during cell division. It recognizes A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH motifs emanate from a beta sheet coiled coil DNA binding module. Both DNA binding elements are free to rotate around a flexible linker, this enables them to bind to complex arrays of A- and B-box elements on adjacent DNA arms of the looped partition site.	6.52283e-49
NZ_CP045721.1\|WP_003855844.1\|175699_176899_-\|ParA-family-protein	gnl\|CDD\|376033	pfam18607, HTH_54, ParA helix turn helix domain. The accurate segregation of DNA is essential for the faithful inheritance of genetic information. Segregation of the prototypical P1 plasmid par system requires two proteins, ParA and ParB, and a centromere. When bound to ATP, ParA mediates segregation by interacting with centromere-bound ParB, but when bound to ADP, ParA fulfills a different function: DNA-binding transcription autoregulation. ParA consists of an elongated N-terminal alpha-helix which mediates dimerization, a winged-HTH and a Walker-box containing C-domain. This entry describes the N-terminal alpha helix domain combined with the winged HTH region.	1.02143e-54
NZ_CP045721.1\|WP_140915533.1\|181277_182456_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.89093e-38
NZ_CP045721.1\|WP_140915537.1\|162022_163216_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.71007e-16
NZ_CP045721.1\|WP_003848232.1\|161341_161734_-\|hypothetical-protein	gnl\|CDD\|319918	cd07255, VOC_BsCatE_like_N, N-terminal of Bacillus subtilis CatE like protein. Uncharacterized subfamily of VOC superfamily contains Bacillus subtilis CatE and similar proteins. CatE is proposed to function as Catechol-2,3-dioxygenase. VOC is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.30545e-09
NZ_CP045721.1\|WP_140915532.1\|182549_183779_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.03342e-116
NZ_CP045721.1\|WP_003848221.1\|171580_173032_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.02817e-123
NZ_CP045721.1\|WP_105099616.1\|169752_171252_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	1.70888e-23
NZ_CP045721.1\|WP_140915536.1\|163301_167852_+\|ATP-dependent-helicase	gnl\|CDD\|137505	PRK09751, PRK09751, putative ATP-dependent helicase Lhr; Provisional.	0
NZ_CP045721.1\|WP_140915531.1\|187568_188756_+\|amidohydrolase	gnl\|CDD\|349882	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family. Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase; acylase I; amido acid deacylase; IAA-amino acid hydrolase; dehydropeptidase II; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. ACY1 is the most abundant of the aminoacylases, a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. It is encoded by the aminoacylase 1 gene (Acy1) on chromosome 3p21 that comprises 15 exons. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney, suggest a role of the enzyme in amino acid metabolism of these organs. Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D), resulting in a metabolic disorder manifesting encephalopathy and psychomotor delay.	8.36518e-152
NZ_CP045721.1\|WP_105099615.1\|167803_168763_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.15389e-86
NZ_CP045721.1\|WP_008924462.1\|168858_169713_+\|aldo/keto-reductase-family-oxidoreductase	gnl\|CDD\|236676	PRK10376, PRK10376, putative oxidoreductase; Provisional.	0
NZ_CP045721.1\|WP_003855849.1\|183900_184239_+\|hypothetical-protein	gnl\|CDD\|119344	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	5.30344e-08
NZ_CP045721.1\|WP_003848235.1\|160673_161291_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	8.97155e-115
NZ_CP045721.1\|WP_105099618.1\|185991_186711_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153233	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	6.67458e-91
NZ_CP045721.1\|WP_140915534.1\|179903_181274_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|184426	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional.	0
NZ_CP045721.1\|WP_140915543.1\|185564_185888_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	2.38537e-07
NZ_CP045721.1\|WP_033742884.1\|184914_185568_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	9.89425e-39

>NZ_CP045721.1|WP_003855844.1|175699_176899_-|ParA-family-protein
MANDDKQVMKVAQRSERMLLSLTDQIQAQKQELHENTYYQVYAKAALAKLPKLTRASVDYAVNEMEESGYQFDKRAAGSSVKYAMSIQNIIDIYHHRGVPKYRDRHSDAFTIFVGNLKGGVSKTVSTVSLAHALRAHPHLLYEDLRILVIDLDPQSSATMFLNHERSVGLVEATAAQAMLQNVSRDELVNEFIVPSIIPGVDVLPASIDDAFIASSWDQLCAEHLPEQNVHAVLYDNVIAKLKKDYDFIFIDSGPHLDAFLKNAIAASDLLMTPVPPAQVDFHSTLKYLTRLPELIAIIEDSGATCRLQGNIGFMSKLSNKADHKLCHSLAKEIFGGDMLDAALPRLDGFERCGESFDTVISANPSTYVGSSEALKNARSAAEDFAKAVFDRIEFIRLN
>NZ_CP045721.1|WP_140915535.1|174720_175692_-|ParB/RepB/Spo0J-family-partition-protein
MSAKRITIGRTFSQTPLENDTNDSQHNQTFVLATGKRAQFRFERIAASDVESKTFVTMETNGRDQTGLTPDSLRDIIRTIKLQQFFPAIGVMRDERIEILDGSRRRAAALICKTGLDVLVTDAAITPDEARRLAQDIQTAREHNLREVGMRLLTLKDGGLSQKEIAENQGLSQAKVTRALQAASVPSDLIALFPNQAELTYPDYKALLQAADKLSESGQSTEALIKSISREIDVVCARDGLAEDELKNHILRLIRQGSQTLMREPEKDKTQATALWSFADKDRFARKKVRGRMFSYEFNRQSKELQEELDKVIAETLKKYLNR
>NZ_CP045721.1|WP_003848221.1|171580_173032_-|sugar-porter-family-MFS-transporter
MSTNTPDSGEAGDHAPADTVRQRIFLVVLVATMGALAFGYDTGIISGALPYMSSPPGQGGLGLNSFTEGLVASSLVFGAAIGSFLSGFFSDRFGRRITLRSLAVIFVLGSLGTALAPSVNIMVAMRFLLGIAVGGGSSTVPVFIAEIAGPRLRAPLVSRNELMIVTGQLIAYVASTLLSYLLHDEHLWRYMLAIAMVPGFLLFIGTFFVPASPHWLVAEGRLKEAKKILKYLRETPREVRHEMAQMKKQARAAERGPDAKTLIREKWVIRLMIIGVGLGFVAQFTGVNGFMYYTPIILKSTGLGTSASIAATIGNGVVSVLATFVGIWAISRFPRRTMLITGLCLVITAQIMLGSVLTFMSSSVMQSYLALACILMFLFCMQMCISPVYWLMMSELFPMQLRGVLTGGAVSLQWIFNAVVAFGFPPVMEYAGSTTFFIFAAINVGSLFFVMAMVPETRGKSLEEIESHMKEKFGEKRREAEAL
>NZ_CP045721.1|WP_105099616.1|169752_171252_-|alpha/beta-hydrolase
MNRKWKTAKRRLWRLGIVTGLVLLLLLIIRIYEAERGPELKRWHTWIPHELTASQLDNATYADYLNAEDHLFNEMKQQVSDKLEAEDKTPLNRYYAGSMIYPGRFVQDWNRSYILRPTGTPRGAVVLLHGLTDSPYSLRHVADVYYQQGYAVVAIRLPGHGTVPAGLTDVDWQDWMAATRLAVREATRLAGTQTPLHLVGFSNGGALAVKYALDSLDDHTLRRPQQLILLSPMIGVTRFARFAGIAGLPAVFPAFSKTAWLNIVPEFNPFKYNSFPVHAARQTYLLTQALQKEIQHYARNKQLSAFPPVLTFQSVMDSTVSTSSVIRSLYNFLPENGSELVLFDINQAVSVSPLFRHSSYTAVNQLLPAARRRYASTVITNASATSLEMVTKSVPAGEIQEQIKPLAIDYPAGLYSLSHVAIPFPAEDGLYGSAPAKKNEFGISFGTLSLRGESAVLIVGLDSIMRATSNPFYPYMIEQIDHHISCSDKPPLAACLSHF
>NZ_CP045721.1|WP_008924462.1|168858_169713_+|aldo/keto-reductase-family-oxidoreductase
MSNTTMTYPLGDREVNRLGYGAMQLAGPGVFGPVKDEARAIQVLRDAIAAGVNHIDTSDFYGPHETNQLIKKALYPYPQDLCIVTKVGARRDAKGGWQAAMEPEALTQAVEDNLRNLGLDVIEVVNLRSMLHPAKPKEGSLMPQLEALLALQARGLIRHIGLSNVTATQIAEAQAITPIVCVQNMYNLAHRQDDELVDQLAQQGIAYVPFFPLGGFSPLQSDRLNEVAVSLKATPMQVALAWLLRRSPNILLIPGTSSPEHLKENLASASLQLSDEVMEKLNAI
>NZ_CP045721.1|WP_105099615.1|167803_168763_-|LysR-family-transcriptional-regulator
MAIDMALLDAVVAVAKAGGFREAARVTGSNASRLSDAVRRAEQQLGIRLFHRTTRTVVLTEAGRALMERLLPAMNEVNAALDAVNRYRNTPGGTLRLNVPVSATRLILPALVPEFLQRYPDIRLEIVAESNVQDVFRDGCDAGIRYDERLEQDTVVIPIGPRLQRFALAASPAYLAEYGRPEHPRDLIHHRCLRGRYASGIMAEWTFSREGEEISVETSGPLVVTVGGAMDLAVDAAIAGSGIIYLFDEWLRPALDSGKLEPLLQSWWLTFSGPWLYYSDRRLIPAPLKAFIDFVRETNEREKTQLYQLKPCGTRENPA
>NZ_CP045721.1|WP_140915536.1|163301_167852_+|ATP-dependent-helicase
MRNTVSMMSKSQSDTVLARFSPATRRWFSGAFAAPTPVQQAAWQAIARGEHALVIAPTGSGKTLAAFLTAIDTLFQVRTSQPAPTRETTTRILYISPVKALAADVQRNLNLPLAGVYAERQALNEPEITLNIGMRSGDTPSTERARLLRRPPDILITTPESLFLMLTSKARTTLKGVTTVIVDEVHAVAGSKRGSQLALSLERLDALLPKPAQRIGLSATVRPVERVAAFLGGCQPVQVVNPAANRTLHLTIEVPVEDMTDIASADNLTDDVTSASGSIWPHIEARILQQVMAHRATLVFVNSRGLAEKLTARLNARYLAQQATAEVQDAERTVDDDLIARSHHGSVSKEQRGEIEAALKQGRLRCVVATSSLELGIDMGPVDLVVQVGSPLSVASALQRVGRAGHQVGGVSTGILFPRTRRDLLDSAVIIESMRAGQLDALAPPRNPLDILAQQTLAAVAMDPLQADEWYAQVCRADPFRTLSRRLFDATLDMLAGKFPSDAFAQLRPQLVWDRLSGMLTARPGAQHLAVTSGGTIPDRGMFSVILPEGEEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQKITHDQVQVVPAPGRPARLPFWRGEGVGRSADSGASLGMFLRQLNAASPDDAQQQLHALGLDARAVTNLLTLLAEQRAATGVVPDDRTLLIERCRDEIGDWRVILHSPWGKRVNAPWALAIAARIQQRMGIDASVAASDDGIVARFPASEGHLPAADLFRFDADSLTQEVTQSVGQSALFAARFRECASRALLLPRRNPGKRSPLWQQRLRAGQLLEVARQFDDFPILIETARECLQDVYDLPALHQLMEKLALDQIKMVEVTTEHPSPFAAPLLFGYVAEFIYASDAPQAERRASLLALDSNLLGELLGQTSKRDLLAPDVVEQVEKELQRLDTRYHAQHAESLIDLLRDLGPLSLADIAARFSGNDTQIKEALAQFSAARRIIPVILADELRWAVIEDAARLRDALSVVLPDDLPATFLVPQAAPLPDLINRYARTHTLFNAQQLATHFGLGVAVVNEVLFTLLQQGSLLNMGTVADKSETEWVSSDIFKRLRLRSLQSAREATRPVSPTAWVSLLLERHGLLSAQREELSGTNGLLRVIEQLAGVPLPASLWESQILRARIVDYQPAMLDELLANGEVIWCGHKALGQSDGLISFHLTEFADETLPVIDTTQPLTSIQQATIDALSRGGSWFVHEIMAQMENEETHPTEINDALWQLVWQGYVSSDSWIAVRGLLTTPVMTRSRPTRSLRTRFGQRLSPGALPTRRPAVNRLAGRWSRIRRQEITPARLGLSLAENLLDRYGVITRGCVISEQIPGGFPALQPVLRGMEDAGRLLRGQFVAGAGGAQFADHQTIERLRVLADNPETLTEAVALSALDPANPFGAMLSWPIHASGIRPTRRQGGRVVIAGGALILYLTPAGKELLTFSEEPARLQTAVAVLGMALKRDKSASFTLETVDGEPVTQSSLLNALRHAGFSRVPQGFSWYS
>NZ_CP045721.1|WP_140915537.1|162022_163216_+|MFS-transporter
MNPALTPQAATRTTLFSFTGAALISATSSAPTPLYPLYRSLFDLTPTMLTLIFGAYAFALLAALLTVGKVSDFTGRRPLMLMALGINAVALVIFMTASAATTLIAARLVQGFATGIALPTFGASLIDASKTRGPLLNSITAFLGMTLGTLAGGILVTFAPYPTVTLYALLLLLMLAAIALLPLIPETIAPQPGVLAALRPQVSIPRRALGPLLKVTPVNIATWMLGGFYLSLMPTMVANATGLTSPFIGGSIVATLMLSATAAVFIFRLLPAARALVIGTVMLMAGVSVTLTGLSLHSVVWLYAGTAIAGQGFGSIFASVLKIIMPLAESHERAGLFAAFLIKSYLAFALPAIAAGIAAPHIGLNQTAWCYGMTIIVLALVSLLAVRGRDPAGAASS
>NZ_CP045721.1|WP_003848232.1|161341_161734_-|hypothetical-protein
MKIAEIDHIHLYVENIEQAETWYNKILGFSRDNALYFWFEQGGPLVIRNNRASLSLFLRSTQLPGHTVAFGVAASSFSELIPVLRDNKIPFTVSDHAVSMSVYFSDPSDNKIEITSYDYVDAKQILEDLV
>NZ_CP045721.1|WP_003848235.1|160673_161291_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MAEQHNIITELTELEHLYGSVARPSIAKVTDHIHPAYRPFIAASPFVALATSGQEGLDVSPRGDPAGFIEIDDEKTLLLPDRRGNNRIDSLRNILHDNRVALLFLIPGIGETLRINGTAVISTDPALLERFAVNNQRPKTVLRISVQSVFFQCSRAIIRSGLWDAETQISRQSLPSTGSILKQIAEIDGDAYDKALPERLKNTLY
>NZ_CP045721.1|WP_003855845.1|178515_179445_-|RepB-family-plasmid-replication-initiator-protein
MADKDNENKALLEPFLSVTKNSGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARGKSGAMASTDATKELKNLTLVKAEGYEKITITGARLDMDNDFKTWAGIIQSFSRYPTKGDTVTLPFIDFVKMCGIPSANSSAALRKRLDASLRRIATNTLSFEGNGKAYHTHLVQSAYYDREKDIVRIQADPKLFELYNFDHKVLLQLRAISRLKRKESAQALYTFLESLPTNPAPISLARLRMRLNLGSKTTTQNHVVRRAMEQLKEIGYLDYSEVKRGRSVFFIIHSRTPKLDGIGNLESIDSLDEIEFED
>NZ_CP045721.1|WP_140915534.1|179903_181274_+|aldehyde-dehydrogenase-family-protein
MTEHALSHNPATGEILARYPLQNPAELEQTLETSASAFATWKHSSMTDRVRVLRQLGEQLRLREPDLSRMITTEMGKPISQARAEVLKCANLCDWYAEHGPAMLADQPTQIADAWQRFRPIGVILAVMPWNFPLWQVLRGAVSMLLAGNTYLLKHAPNVMGSATLMAELFSATDLPAGGFNLVNVDNDGVSVAIKDDRIAAVAVTGSVRAGAAIAAQAGAALKKTVLELGGSDPFIVLADADLDEAVKSAVIGRFQNTGQVCMAAKRFIIEAPIAEEFEKRFTAAVQALTMGDPLDENTFLGPMARADLRDELDGQVKATLSEGARLVLGGEKVAGQGNYYAPTILADVTSNMTAFRQELFGPVAAIAVARDPQHALEIANDSEFGLSATVWSGNEEIADQLARQLEVGAVFINGNGASDPRVTIGGVKKSGYGRELSHFGVHEFCNVQTVWKNRR
>NZ_CP045721.1|WP_140915533.1|181277_182456_-|FAD-dependent-oxidoreductase
MPQRIAVIGAGVLGLAVAQSLSRRGAQVTVFDKNYPGSGTSQISYAWVNANGKEPTSYHDLNAHAIDEHKRWQASHPASPQWLLETGTLEWAADQSSLCQLARRAAKLTTLDYPVEKRSRAALLDALPALRLDPRIQHAWFFPSECLLYPSLFIASLLADLRASGGQLVCNNEVTTLTETNRDVHLTLASGDEWRGDQLVLATGRWAPELMSQCGLELAMTDANRADPVACSFLAQTQPLPIPLKCNLITPELNVRPDGGGRLMLQALDLDQHADPARPVSPDGLIGKEMLRRLRRLFKNAEGARIERIETGQRSRPADGLPATGYISASARVYLMVSHSGMTLAPLLGRLVAEEMLSGTASPMLSAFAPDRLLRPLSAVAKAAPAYLPSAQ
>NZ_CP045721.1|WP_140915532.1|182549_183779_-|GTP-binding-protein
MPLSLLTSEDPRLPVTVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEINIDAALVRDGGAQLSRTDEKLVEMSNGCICCTLREDLLLEVKRLALAGRFDHLVIESTGISEPLPVAETFTFEDEEGESLSAYARLDSMVTVVDGFNFLRDYRSVDDLQSRGESLGEEDTRSVVDLLVDQIEFCDLLVLNKTDLLSQTQLHELQGMLRALNPDALIVNSEFGQVPLDCLLNTRRFNFDRAAQAPGWLQTLRGEHQPESEEYGIRSFVYRARRPFHPLRFWEVVNHQLDGVIRSKGYFWLASRPDYAAMWSQAGAVARQGYAGRWWVSVPRMDWPQDADTLNFIAEHWQEGTGDARQELVFIGIEMDEKRILSALDHALLTPYEMAAGPEQWINLPDPVPDWFDEATI
>NZ_CP045721.1|WP_003855849.1|183900_184239_+|hypothetical-protein
MQTLTLVPRLVPDVRSGVKTSTIRWQEGDVVTGPLKLVNQEDATDTVIVWVTRIETLRLNHIAARLGKEAEWPDAVLLAGMREHYPEISLSSEVQLITHLTPAETQVKLAER
>NZ_CP045721.1|WP_003855850.1|184239_184788_-|helix-turn-helix-domain-containing-protein
MNTPISIIANALVRERQRAGLSLAEVARRAGIAKSTLSQLEAGNGNPGIETLWSLCVTLNIPFSRLLEPDARRLQVIRRGEGLSVTADLADYQAVLLASCPPGVRRDIYLLEVQPGSERISQPHIPNTIEHIIIAKGRALVGPVESAVELDVGDYITYPGDELHIFRALEADTLALLVIEHS
>NZ_CP045721.1|WP_033742884.1|184914_185568_+|branched-chain-amino-acid-ABC-transporter-permease
MQLLDKGVIKAIFLVCLADGIVGLSYGSLASADGFPLWVPLALSTLVLAGASEFLFIGIVAGGGSPFTAAAAGLLVNARHLPFGIAVKDLVGTGPRGWFGCHIMNDESVVFGISQPQLAQRRSAYWLCGIGIGFIWPVSVMTGAAIGQFIPDVSVIGLDAVFPAILIALIFPALRQRRTRIPATVGALLSLLATPLVPAGMPVLFSLLGLLTWRSRK
>NZ_CP045721.1|WP_140915543.1|185564_185888_+|AzlD-domain-containing-protein
MTHQGMIIAGIAMLAAGTYLMRFAGVRLGNRLPVSERTQQILSDAATVLLLAVAATTTLFEGHHFAGEARVAGVGFALLLAWRRAPLIVIILGAAVMTALLRFLGVS
>NZ_CP045721.1|WP_105099618.1|185991_186711_+|DJ-1/PfpI-family-protein
MNRPLQIGLLLFPDVTQLDLTGPWEVFARTPDTSCHLVWKDLQPVRSDRGLSVLPTMTFDTCPQLDVICVPGGPGQIALMSDDVTLNFLQKQAAQAQWITSVCTGSLVLGAAGLLKGYRATSHWSSIDQLALLGADPVSQRVVRDRNRISGAGVTSGIDFALTLVAEIAGDAVAKAVQLQMEYDPQPPFTSGSPKTAPPQEVEQAKAKMAAFIATRRAATMRAAQRLQAEQLPDAGNTQ
>NZ_CP045721.1|WP_140915531.1|187568_188756_+|amidohydrolase
MNQEKARLAGEIKAGVNELESQLVAIRRDIHAHPELGFDTLRTARLVTDYLQALGLHPRTGVGRSGVVVDIDGAEPGKTLLLRADMDALPIQEQTGLPFASRYPGKMHACGHDIHTATMLGVATLLPRYRQQLKGRVRLIFQPAEETPESGAEAMIADGVAEGIDWAVTLHNKPELAAGEVALTRGASTASSDEFDVTVHGVSTHAARPHMGTDPILATVHLISQLQTIISRERDPAHSAVLTIGHIQGGTTHNIIPDSCLFQGTIRTKSPEVRAAMEASFKRMCEGVALAQNVRVEVNFQRGVPPLMNDDRLIDSLEEILSHQFDKAIIAQPSASFGAEDFSLFTERVPGCQIHIGSATPGRDDHLHNSDYQPDERSITAGTQALTRLAIDLLS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045721_1	1.1\|177839\|29\|NZ_CP045721\|PILER-CR	177839-177867	29	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	177838-177866	0	1.0
NZ_CP045721_1	1.2\|177891\|75\|NZ_CP045721\|PILER-CR	177891-177965	75	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	177890-177964	15	0.8
NZ_CP045721_1	1.2\|177891\|75\|NZ_CP045721\|PILER-CR	177891-177965	75	NZ_CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	208888-208962	16	0.787

1. spacer 1.1|177839|29|NZ_CP045721|PILER-CR matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgacgcaacaactcgtctattctctcaac	CRISPR spacer
cgacgcaacaactcgtctattctctcaac	Protospacer
*****************************

2. spacer 1.2|177891|75|NZ_CP045721|PILER-CR matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 15, identity: 0.8

acgttcactgtaatcagcaggacgtcgctgctcaatcatagcaacctggactgccctgaa	CRISPR spacer
acgttcactgtaatcagcaggacgtcgctgctcaatcatagcaacctggactgccctgaa	Protospacer
************************************************************

3. spacer 1.2|177891|75|NZ_CP045721|PILER-CR matches to NZ_CP022517 (Pantoea vagans strain FBS135 plasmid pPant1, complete sequence) position: , mismatch: 16, identity: 0.787

acgttcactgtaatcagcaggacgtcgctgctcaatcatagcaacctggactgccctgaa	CRISPR spacer
acgttcactgtaatcagcaggacgtcgctgctcaatcatagcaatctggactgccctgaa	Protospacer
********************************************.***************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1900 : 57770

Escherichia_phage(72.5%)

head,lysis,capsid,plate,tail,portal

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_122889994.1\|1900_3166_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.8e-121	52.6
WP_140916586.1\|3149_3590_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	9.2e-33	60.0
WP_122889998.1\|5452_6337_-	protein RepA	J9Q7H0	Salmonella_phage	8.3e-73	50.0
WP_140916549.1\|6709_7369_+	recombinase	Q5QBN4	Enterobacteria_phage	4.3e-42	51.4
WP_140916548.1\|7554_8208_+	maturation control protein	A0A222YZ79	Escherichia_phage	2.2e-54	49.1
WP_008927056.1\|8204_8537_+	hypothetical protein	A0A222YYR0	Escherichia_phage	6.7e-36	64.5
WP_140916547.1\|8529_9747_+\|tail	phage tail protein	A0A222YXT1	Escherichia_phage	6.6e-129	60.5
WP_140916546.1\|9746_10532_+\|tail	phage tail protein	A0A222YXU3	Escherichia_phage	8.1e-64	52.2
WP_140916545.1\|10528_11299_+\|plate	baseplate	A0A222YWF4	Escherichia_phage	6.5e-58	47.6
WP_140916544.1\|11298_12288_+\|tail	tail length tape measure protein	A0A222YXZ0	Escherichia_phage	2.0e-96	52.5
WP_167518492.1\|12335_12893_+\|plate	baseplate protein	A0A222YWF1	Escherichia_phage	8.9e-57	69.4
WP_140916542.1\|12957_13866_+	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	7.9e-79	50.3
WP_140916541.1\|13862_16658_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1B0V7P0	Salmonella_phage	2.9e-204	46.4
WP_140916540.1\|16835_17648_+	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_140916539.1\|17639_17960_-	hypothetical protein	NA	NA	NA	NA
WP_140916538.1\|18100_18508_-	hypothetical protein	NA	NA	NA	NA
WP_140916537.1\|18702_19284_+	hypothetical protein	NA	NA	NA	NA
WP_140916536.1\|19318_19603_+	alanine racemase	Q1MVI7	Enterobacteria_phage	1.3e-27	62.8
WP_140916535.1\|19656_20181_+	hypothetical protein	A0A222YWG1	Escherichia_phage	2.6e-05	44.7
WP_140916534.1\|20444_22106_+	hypothetical protein	NA	NA	NA	NA
WP_140916533.1\|22172_22607_-	hypothetical protein	NA	NA	NA	NA
WP_140916532.1\|22776_24522_+\|capsid	capsid protein	A0A222YWC7	Escherichia_phage	2.7e-216	65.7
WP_140916531.1\|24568_26146_+\|tail	phage tail protein	A0A222YWC8	Escherichia_phage	1.1e-176	59.0
WP_140916530.1\|26157_26868_+	hypothetical protein	A0A222YXT7	Escherichia_phage	1.6e-50	58.1
WP_140916529.1\|26911_27502_+	hypothetical protein	A0A222YY02	Escherichia_phage	4.1e-60	60.0
WP_140916528.1\|27512_28004_+\|plate	baseplate protein	A0A222YWE4	Escherichia_phage	6.4e-67	74.2
WP_140916527.1\|28006_28558_+	hypothetical protein	Q1MVL0	Enterobacteria_phage	6.8e-49	57.8
WP_140916526.1\|28567_29290_+\|tail	phage tail protein	A0A222YY05	Escherichia_phage	6.8e-65	52.9
WP_140916525.1\|29301_30120_+	hypothetical protein	A0A222YZ63	Escherichia_phage	6.9e-90	57.7
WP_153574591.1\|30733_30907_+	hypothetical protein	NA	NA	NA	NA
WP_153574592.1\|30912_34014_+	hypothetical protein	A0A222YXR4	Escherichia_phage	1.7e-120	37.4
WP_140916524.1\|34017_34377_+	hypothetical protein	A0A222YXD0	Escherichia_phage	1.7e-32	51.3
WP_140916523.1\|34389_35823_+\|plate	baseplate protein	A0A222YWB2	Escherichia_phage	1.5e-148	54.6
WP_140916522.1\|35832_36924_+\|tail	phage tail protein	A0A222YWB7	Escherichia_phage	1.3e-67	47.3
WP_140916521.1\|36986_37430_+\|tail	phage tail protein	A0A222YXS1	Escherichia_phage	7.1e-33	52.9
WP_140916520.1\|37435_41170_+	hypothetical protein	A0A222YWB9	Escherichia_phage	1.4e-41	53.5
WP_140916519.1\|41172_41712_+\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	1.5e-24	38.4
WP_052250668.1\|41834_42152_+	hypothetical protein	A0A222YZ46	Escherichia_phage	2.1e-10	44.4
WP_140916518.1\|42148_42604_+\|lysis	lysis protein	A0A222YXP5	Escherichia_phage	2.5e-33	50.0
WP_140916517.1\|42590_43208_+	hypothetical protein	A0A222YXB2	Escherichia_phage	2.4e-42	58.9
WP_140916516.1\|43204_45409_+	hypothetical protein	A0A222YWA3	Escherichia_phage	4.7e-93	45.3
WP_140916515.1\|45405_45801_+	ddrA	A0A222YWB0	Escherichia_phage	1.2e-07	43.4
WP_140916514.1\|45845_47222_+	hypothetical protein	A0A222YY44	Escherichia_phage	7.3e-193	76.3
WP_140916513.1\|47339_47609_-	hypothetical protein	NA	NA	NA	NA
WP_140916584.1\|50388_51021_+	Vat family streptogramin A O-acetyltransferase	M1HS53	Paramecium_bursaria_Chlorella_virus	1.3e-08	46.7
WP_140916583.1\|51254_51746_+	glycoside hydrolase family protein	S4TUB1	Salmonella_phage	1.6e-46	58.0
WP_140916582.1\|51742_52636_-	hypothetical protein	NA	NA	NA	NA
WP_140916581.1\|53004_54006_-\|head	head processing protein	A0A222YWA7	Escherichia_phage	1.7e-103	58.4
WP_158601488.1\|54303_54444_+	hypothetical protein	NA	NA	NA	NA
WP_140916580.1\|54436_54694_+	hypothetical protein	NA	NA	NA	NA
WP_140916579.1\|54918_55398_+	hypothetical protein	NA	NA	NA	NA
WP_140916578.1\|56072_57770_-\|portal	phage portal protein	A0A222YXQ7	Escherichia_phage	1.6e-194	63.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP045720

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045720_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045720_1

1051561-1051670

Orphan

Consensus_repeat	Method
TTGCATTGTTCAAAAACGCTCCCGGCGTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045720_1

>merge|NZ_CP045720|1|1051561-1051670|CRISPRCasFinder
TTGCATTGTTCAAAAACGCTCCCGGCGTTTTTAGTACGCACCTCGTCCCTGAGGTGCGCCCGTTGCCGGGCCAACGCTTTGCGTTGTTCAAAAACGCTCCCGGCGTTTTT

>NZ_CP045720|1|1|1051561-1051670|CRISPRCasFinder
TTGCATTGTTCAAAAACGCTCCCGGCGTTTTT	AGTACGCACCTCGTCCCTGAGGTGCGCCCGTTGCCGGGCCAACGCT
TTGCGTTGTTCAAAAACGCTCCCGGCGTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045720.1\|WP_140915736.1\|1051755_1052940_-\|NO-inducible-flavohemoprotein	unknown	unknown	gnl\|CDD\|237337
NZ_CP045720.1\|WP_008926709.1\|1060080_1060884_-\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NZ_CP045720.1\|WP_110411086.1\|1040714_1041206_+\|tRNA-adenosine(34)-deaminase-TadA	unknown	unknown	gnl\|CDD\|182786
NZ_CP045720.1\|WP_003848647.1\|1051011_1051350_+\|nitrogen-regulatory-protein-P-II	unknown	unknown	gnl\|CDD\|182784
NZ_CP045720.1\|WP_003848617.1\|1039017_1039857_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183195
NZ_CP045720.1\|WP_140033136.1\|1042926_1046814_+\|phosphoribosylformylglycinamidine-synthase	unknown	unknown	gnl\|CDD\|235394
NZ_CP045720.1\|WP_140915738.1\|1049489_1050827_+\|two-component-system-response-regulator-GlrR	unknown	unknown	gnl\|CDD\|185070
NZ_CP045720.1\|WP_003848654.1\|1055778_1057047_-\|stationary-phase-inducible-protein-CsiE	unknown	unknown	gnl\|CDD\|236932
NZ_CP045720.1\|WP_003848653.1\|1054648_1055797_+\|3-phenylpropionate-MFS-transporter	unknown	unknown	gnl\|CDD\|236856
NZ_CP045720.1\|WP_140915734.1\|1057819_1058800_+\|nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225125
NZ_CP045720.1\|WP_008926710.1\|1059004_1060018_+\|TIGR04086-family-membrane-protein	unknown	unknown	gnl\|CDD\|274969
NZ_CP045720.1\|WP_140915741.1\|1038713_1038962_-\|YfhL-family-4Fe-4S-dicluster-ferredoxin	unknown	unknown	gnl\|CDD\|131747
NZ_CP045720.1\|WP_140915739.1\|1048824_1049493_+\|two-component-system-QseEF-associated-lipoprotein-QseG	unknown	unknown	gnl\|CDD\|236745
NZ_CP045720.1\|WP_140915735.1\|1057202_1057829_+\|DUF1007-family-protein	unknown	unknown	gnl\|CDD\|368801
NZ_CP045720.1\|WP_003848651.1\|1053266_1054520_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP045720.1\|WP_003848663.1\|1061016_1061769_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	unknown	unknown	gnl\|CDD\|185069
NZ_CP045720.1\|WP_003848623.1\|1041202_1042660_-\|membrane-bound-lytic-murein-transglycosylase-MltF	unknown	unknown	gnl\|CDD\|236778
NZ_CP045720.1\|WP_140915740.1\|1047393_1048821_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP045720.1\|WP_140915733.1\|1061899_1062397_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|236777
NZ_CP045720.1\|WP_039659517.1\|1040012_1040651_+\|acid-phosphatase-AphA	unknown	unknown	gnl\|CDD\|183218

Protein	Function_ID	Function_description	E-value
NZ_CP045720.1\|WP_140915736.1\|1051755_1052940_-\|NO-inducible-flavohemoprotein	gnl\|CDD\|237337	PRK13289, PRK13289, NO-inducible flavohemoprotein.	0
NZ_CP045720.1\|WP_008926709.1\|1060080_1060884_-\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	0
NZ_CP045720.1\|WP_110411086.1\|1040714_1041206_+\|tRNA-adenosine(34)-deaminase-TadA	gnl\|CDD\|182786	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional.	1.36646e-111
NZ_CP045720.1\|WP_003848647.1\|1051011_1051350_+\|nitrogen-regulatory-protein-P-II	gnl\|CDD\|182784	PRK10858, PRK10858, nitrogen regulatory protein P-II.	1.00062e-62
NZ_CP045720.1\|WP_003848617.1\|1039017_1039857_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|183195	PRK11557, PRK11557, MurR/RpiR family transcriptional regulator.	2.92704e-176
NZ_CP045720.1\|WP_140033136.1\|1042926_1046814_+\|phosphoribosylformylglycinamidine-synthase	gnl\|CDD\|235394	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional.	0
NZ_CP045720.1\|WP_140915738.1\|1049489_1050827_+\|two-component-system-response-regulator-GlrR	gnl\|CDD\|185070	PRK15115, PRK15115, response regulator GlrR; Provisional.	0
NZ_CP045720.1\|WP_003848654.1\|1055778_1057047_-\|stationary-phase-inducible-protein-CsiE	gnl\|CDD\|236932	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional.	0
NZ_CP045720.1\|WP_003848653.1\|1054648_1055797_+\|3-phenylpropionate-MFS-transporter	gnl\|CDD\|236856	PRK11128, PRK11128, 3-phenylpropionate MFS transporter.	0
NZ_CP045720.1\|WP_140915734.1\|1057819_1058800_+\|nickel/cobalt-transporter	gnl\|CDD\|225125	COG2215, COG2215, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.13177e-77
NZ_CP045720.1\|WP_008926710.1\|1059004_1060018_+\|TIGR04086-family-membrane-protein	gnl\|CDD\|274969	TIGR04086, hypothetical_protein, putative membrane protein, TIGR04086 family. Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. The function is unknown.	9.99326e-07
NZ_CP045720.1\|WP_140915741.1\|1038713_1038962_-\|YfhL-family-4Fe-4S-dicluster-ferredoxin	gnl\|CDD\|131747	TIGR02700, Uncharacterized_protein_MJ0208, archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown. [Unknown function, General].	5.40772e-07
NZ_CP045720.1\|WP_140915739.1\|1048824_1049493_+\|two-component-system-QseEF-associated-lipoprotein-QseG	gnl\|CDD\|236745	PRK10722, PRK10722, two-component system QseEF-associated lipoprotein QseG.	6.57494e-99
NZ_CP045720.1\|WP_140915735.1\|1057202_1057829_+\|DUF1007-family-protein	gnl\|CDD\|368801	pfam06226, DUF1007, Protein of unknown function (DUF1007). Family of conserved bacterial proteins with unknown function.	1.6036e-77
NZ_CP045720.1\|WP_003848651.1\|1053266_1054520_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP045720.1\|WP_003848663.1\|1061016_1061769_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	gnl\|CDD\|185069	PRK15114, PRK15114, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Provisional.	0
NZ_CP045720.1\|WP_003848623.1\|1041202_1042660_-\|membrane-bound-lytic-murein-transglycosylase-MltF	gnl\|CDD\|236778	PRK10859, PRK10859, membrane-bound lytic murein transglycosylase MltF.	0
NZ_CP045720.1\|WP_140915740.1\|1047393_1048821_+\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.30154e-47
NZ_CP045720.1\|WP_140915733.1\|1061899_1062397_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|236777	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR.	2.43079e-106
NZ_CP045720.1\|WP_039659517.1\|1040012_1040651_+\|acid-phosphatase-AphA	gnl\|CDD\|183218	PRK11590, PRK11590, hypothetical protein; Provisional.	1.26033e-147

>NZ_CP045720.1|WP_003848647.1|1051011_1051350_+|nitrogen-regulatory-protein-P-II
MKKIDAIIKPFKLDDVREALAEVGITGMTVSEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEMVVGDDIVDTCVETIMRTAQTGKIGDGKIFVFDVARVVRIRTGEEDEEAI
>NZ_CP045720.1|WP_140915738.1|1049489_1050827_+|two-component-system-response-regulator-GlrR
MMVRQAAKLLLVDDDPSLLKLLGMRLRSEGYQITTAGSGPEALRLLQKEKIELVISDLRMDEMDGLALFGEIQKRHTGLPVIILTAHGSIPDAVSATQQGVFSFLTKPVDRDALYKAIDEALAQQAPVSDDRWREAIVTRSPLMLKLLEQAHMVAQSDVSVLINGQSGTGKEMLAQAIHTASPRNGKPFVAINCGALPEQLLESELFGHAKGAFTGAVSAREGLFKAAGGGTLFLDEIGDMPQPLQVKLLRVLQERKVRPLGSDHDSEIDVRIISATHRDLPKAMEKKEFREDLFYRLNVVNLKIPALHQRTEDIPLLANHLLRQAAERHKPQIRSFSVDAMKRLMAASWPGNVRQLVNVIEQCVALSSSPVISDALVEQALSGENSALPTFAEARNQFELNYLRKLLQMTKGNVTNAARLAGRNRTEFYKLLSRHELDASDFKE
>NZ_CP045720.1|WP_140915739.1|1048824_1049493_+|two-component-system-QseEF-associated-lipoprotein-QseG
MKYLPALLLSTLTTLLLSGCTTSPATSSLSSGHQVAEPEVSIADYLATRCNDLWPIEKSAALNNPLYWMRAIDCAERLSSAEARAEAHRWPAENWSRAFKQGVLMSNGNVTPVERRRYVETLDRYSVDFPQSVRPLIQLWRSNQTAQLDLSEARTRYAHLQQSSDSQLEAIRQQMVKQQQQLSDTQHKLERLTDIERQLSSRKAPDVSDSSHGTALPQDEEQ
>NZ_CP045720.1|WP_140915740.1|1047393_1048821_+|HAMP-domain-containing-protein
MKKWRLFPRSLRQLVLMAFVLVLLPLLVLAWQAWESLSALSEQAADTNRNTFTDVRRSEAMARTAVELERSYRQYCVLDDASLSRLYQTQYTRYSQMLSSHSASLPELPAFQTLQATLPLLTPLKCDNGNPITPAAEALDRFSATNAQMVQDTREVVFSRGLQLQREIADRGQFFGWQALILFIISLALMTLFTGMIIGPVKRIERMINRLGEGRELGNSVIFRGPRELRSLGQRIVWLSERLAWLESQRHEFLRHLSHELKTPLASLREGTELLADEVAGSLNADQKEVVTILDSSSRHLQRLIEQLLDYNRKLADGPIQQEPVSVAAIVEGVVNAHALSARAKLMQTVVNLEVSHCLAEPTLLMRVIDNLYSNAVNYGSESGTIWLRSQQQGDRIWIEVANSGTPIPPEEQAMIFEPFFQGSQQRKGPVKGSGLGLSIAKDCLRRMHGDLTLVPCEQADVCFRIELNTTAGKV
>NZ_CP045720.1|WP_140033136.1|1042926_1046814_+|phosphoribosylformylglycinamidine-synthase
MEILRGSPALSAFRVNKLLTRFQDAHLPVSDIYAEYIHFADVSTPLSADEQSRLQRLLKYGPSLAEHAPQGRLLLVTPRPGTISPWSSKATDIAHNCGLPQVRRLERGLAFYVQAPQLTEAQWQTLGTLLHDRMMETVFSDLAQAEQLFAHHTPQPVKSVDLLGEGRQALVQANISLGLALADDEIDYLVAAFTALGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGEKQPKSLFKMIKNTMEKTPDFVLSAYKDNAAVMEGSEVGRFFADAGESEYRWHQEAAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGSKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPARIVSALEIMTDGPLGGAAFNNEFGRPALNGYFRTYEEQVTSHNGTELRGYHKPIMLAGGIGNIRADHVQKGEITVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDENPILFIHDVGAGGLSNAMPELVSDGGRGGRFNLRDILSDEPGMSPLEVWCNESQERYVMAVAPDQLAQFEAICQRERAPFAVIGEATEELHLSLEDSHFDNKPIDMPLDVLLGKTPKMTRDVVTQQAQGTELQRDGITLVDAVNRVLHLPAVAEKTFLITIGDRSVTGMVARDQMVGPWQIPVANCAVTTASLDSYHGEAFALGERSPVALLDFAASGRLAVGEALTNLAATQIGSLKRVKLSANWMSAAGHPGEDAGLYAAVKAVGEELCPALGITIPVGKDSMSMKTRWQEGTEQREMTSPLSLVITAFARVEDVRRTITPQLQADQDNLLLLIDLGNGANTLGATALSQVYRQLGDKPADVRDATQLAGFFNAIQALVAEQKLLAYHDRSDGGLLVTLAEMAFAGHCGIDVDIASLGSDTLAALFTEELGAVIQINAADRDAVERILADHGLAASTHLLGSAQPGDRFVIRSGDSAVYSESRNTLRTWWAETTWQMQRLRDNPACADQEHEAKKNDSDPGLNVNLTFNPQEDVAAPMIATGARPRVAVLREQGVNSHVEMAAAFDRAGFTAIDVHMSDLLAGRRGLEAFQALVACGGFSYGDVLGAGEGWAKSILFNPRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGSDLWPRFVRNQSERFEARFSLVEVAASPSLLLDGMAGSHMPIAVSHGEGFVEVRDATHLAALESKGLVALRFVDNFGKVTETYPANPNGSPNGITAVTNESGRVTIMMPHPERVFRTVSNSWHPAEWGEDSPWMRIFRNARRQLG
>NZ_CP045720.1|WP_003848623.1|1041202_1042660_-|membrane-bound-lytic-murein-transglycosylase-MltF
MKRLKFNYLFIGLVAVLLALALWPSIPWYGGGQDQISQIKSRGVLRVSTINSPLTYYTVNQLPAGMDYELAKRFADYLGVKLKVTVRPNLSDLFDDLDDGKADVLAAGLNYNNERLTRYQTGPGYYNVSQQLVYRVDKPRPKNLGDLKGRLTVAAGSAYLSTLKSARSNQFPDLDWAISTDQSPKALLEAVADGKLDYTIGDSVTIALLQRIYPQLAVAFDVTDEEPVTWYVRHSDDDSLNAAMLDFFNGMGEEGAMARLEEKYLGHVGTFDYVDTRTFLRAIDNTLPDIKPLFEKYATSIDWRLLAAISYQESHWNPQATSPTGVRGMMMLTRNTAESLDVGDRTDPEQSIRGGSQYLQDMMAKVPQSIPEDERIWFALAAYNMGYAHMLDVRKLTARQGGDPDSWADVKLRLPMLSQKRYYTQTTYGYARGHEAYNYVENIRKYQLSLVGYLQEQEKRLKQQAEAQAELAKGYPAVEPKIAMN
>NZ_CP045720.1|WP_110411086.1|1040714_1041206_+|tRNA-adenosine(34)-deaminase-TadA
MKQQDEYWMRHALGLARRAWEQGEVPVGAVLVQNDQVIGEGWNRPIGQHDPTAHAEIMALRQGGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAHDVKSGAAGSLLDVLGHPGMNHQIELHSGVLAEECAAMLSDFFRMRREQKKALRQAQRQG
>NZ_CP045720.1|WP_039659517.1|1040012_1040651_+|acid-phosphatase-AphA
MTRGTQRRIVFFDLDGTLHQQDMFGTFMRYLLRRRPLNLLLVVPVLPVVGIGLLFKGRAARWPMSLLLWSITFGRSEQTLLRLEAEFAQWFRLRVKAFPVVQQRLTDYLSSDDAEVWLITGSPQSLVEQVYYDSAFLPRVKMIASQMQRGWGGRVLAMRCLGHEKVAQLEEKIGTPLQLYSGYSDSKQDNPLLFFCQHRWRVTPAGELQQLE
>NZ_CP045720.1|WP_003848617.1|1039017_1039857_-|MurR/RpiR-family-transcriptional-regulator
MSSLLRIRQLYPRLALNERRLADFLLSQPDRARHLSSQKLAEESGVSQSSVVKFAQKLGYKGFPALKLALSESLADKDAITVHNHILSDDPLKMVGEKLLTEKLSAIRATLDINSEEKLNDVLQLLKNARRILLVGIGASGLVAKDFSWKLMKIGINAVAEQDMHALLASVQAMGPGDVLLAISYTGERREINLAAQEAVQVGADVVAFTGFTPNTLQQSAGYCLYTVAEEQSTRSAAISSTTAQLALTDLLFMALVQNDPERASSHIRHSEALVKKLV
>NZ_CP045720.1|WP_140915741.1|1038713_1038962_-|YfhL-family-4Fe-4S-dicluster-ferredoxin
MALLITSRCINCDMCEPECPNQAISLGDAIYEIDVSRCTECVGHYERPTCQQVCPIDNTIIIDPQHTESRDVLWEKFVLLHG
>NZ_CP045720.1|WP_140915736.1|1051755_1052940_-|NO-inducible-flavohemoprotein
MLDAHTIATVKSTLPAIAACGPKLTAHFYDRMLSHHPELKNVFNMNNQRNGDQREALFNAICAYGANLENLAVLLPAVEKIAQKHTSLNIQPAQYAIVGENLLATIKELLNPGDEALAAWGQAYGILADVFINREEEIYQATAQQTGGWRGTRAFRISAVEQQSEVIKSFTFTPVDGGPVAAFKPGQYLTVHLQPASFEHHQIRQYSLTHLSNGKAYRIAVKREAQGTVSGWLHQHGKVGDELMLAAPHGDFFLEVDSGTPVALISAGVGQTPMLAMLHSLAASEHRAPVSWLHAAENGKQHAFGEEVSATGAQLADFISEVWYRDPAAEDTGRYDTQGLMDISKMAARLASSDTHFYLCGPLPFMQHVVAQLRDARVADARIHYELFGPHKGM
>NZ_CP045720.1|WP_003848651.1|1053266_1054520_+|serine-hydroxymethyltransferase
MLKRDMNIADYDAELWQAMEQETVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMNLAHGGHLTHGSPVNLSGKLYNVVAYGIDETGKINYDELAELAKTHKPKMIVGGFSAYSGVCDWAKMREIADSVGAWLFVDMAHVAGLIAADVYPSPIPHAHVVTSTTHKTLAGPRGGIILAKNGDEDFYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKTYQQQVAKNAKAMVEVLIERGYDIVSGGTYNHLFLIDLVSKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGTPAVTRRGFNEADVRELAGWIADVLDNVNDEATIERTKKKVLDICSRLPVYA
>NZ_CP045720.1|WP_003848653.1|1054648_1055797_+|3-phenylpropionate-MFS-transporter
MAIGSARWLGLGYFTYFFCYGIYLPFWGVWLKGTGLDAEKIGLLLGCGMVARFVGSLLIASQVKNPSRLITALRLLALMTCLFAAGFWVGEQWMWLLTVMIGFNLFFSPLVPLSDALAATWTQQIGLAYGPVRLWGSLAFVISSALTGVLVSAWSSNAILMLLSIGVISMLAGMMLTPVTQPQGHERQGPAGGGWQEWRALLRENAVWRFMLCVTLLQGAHAAYYGFSAIWWQESGYSASTVGYLWSLGVVAEIVVFAMSNRLFRRWSARDLLLLSGICALIRWGLMGATTALPLLIVAQILHCGSFTVCHLAAMRFIAARQGAEVIRLQSLYSALAMGGGIAIMTMICGVLFAHLQGHLFWVMALVALPALFLRPGYDSSK
>NZ_CP045720.1|WP_003848654.1|1055778_1057047_-|stationary-phase-inducible-protein-CsiE
MSSATPLAPLFSRSQRQCHLLLLLFLPTPLLTLEKVCQLNGVDPDVARQDIADVGHEIQRYHQLELHQMVDGSFRLHGTELDRRLCLLHNLRRSLRLSQDFVCEHFAAPLRQRLKVMKIEKALWDETNLQALIQHCSLRLKRDFSERDRLFLQIFMKYGLCQRQPVLFSEAQCLWLQQKPERQAAEDVIYHWRKRCHIAPPVSEADFWTLLFSQIHTPVVDAIAHPAEQQLMKATQQLIDDFEACAGITFADRNELLHQLYPHLAQALDRTHFNIGIDNSVALDVSRLYPRLLRTTQQALQAFEQHYRIAFTPEEVSLITIIFGAWLMQESALQEKQVLILTGDDADLEQDVEQQIREITLLPINITYQDVKLFQREGAPRDVDIIISPYPTSLPLYSPPLVHAELPLTLHHQQRIRYLLES
>NZ_CP045720.1|WP_140915735.1|1057202_1057829_+|DUF1007-family-protein
MKRALFALLMVLSPAVLAHPHSFIDMKTELVVKDDTFSGLKMTWTMDEITSADLLYDAGDAKPGTVVWKKLAAGVMANVLGQHYFSEIWHNQQRVKFLNLPTEYNLSRNGHKAVLEFILPLAEPPKLTGQRFEILTFDPTYFVDMFYDNPGALTLPPALQTRCRFTLNTPKPNDSLKQYALSLDKADAPAEEMDLGRQFAQTVVLKCQ
>NZ_CP045720.1|WP_140915734.1|1057819_1058800_+|nickel/cobalt-transporter
MSIISTPSRATRLWPLWLIAGLFSGGALLVWLYWSQILLQSVLWQKDLHRQMTQLLQQVAEQPHQAGISLVIFSLIYGVLHALGPGHGKVVIATFLATHPSRVRTSIRLTLLASLLQGSVAIVLVTVMLVLLKTSSRQLHLSSFWLEKGSYLLVIGLGVMIGYRALRALWLALRPRPAPVFRAFQPQHQHDEHCGCGHAHLPTPQQMNGNVSWKTQMLVVVSMGLRPCSGAIMMLLFAKVIGVYGWGILSAAVMALGTALTISAIGLLVQQARSVAQRLAQPGAGAGIMRLLIPILALTGSLILIVVGIALWQSARLTLGGGIRPF
>NZ_CP045720.1|WP_008926710.1|1059004_1060018_+|TIGR04086-family-membrane-protein
MADTRINNGYTETLATGPAGLPLKRISWSAVFAGVICALIVHIILTLLGTAIGATTIDPMKEQNPLDGLGTGALVWTAIEMLVAMAAGSYVAGRLAQREGALHGLLMFGLSTIFTIYLAIALATSVLGGAMNIVGSGFQALGSGISAAAPSVTQMAKQKLQENNINLDNLQNELETTLRQTGKPELQPENLKQDANKEAQNAENQASNTANHPQTADTDLTNWVKGVMDRHSDTLQAADRDALKNIIKARTGKSDQEVDQIVAKTEQNYQQAVQKYQELKQQAEQKAREAGEKAAAATAKASWYALILLIIEAVLAGVMGMVGRRTQPRQVLAHERR
>NZ_CP045720.1|WP_008926709.1|1060080_1060884_-|inositol-1-monophosphatase
MHPMLNIAVRAARKAGNLIAKYYETPDAVEASQKGSNDFVTNVDREAERLIIEIIRKSYPKHTIITEESGELAGEDQDVQWVIDPLDGTSNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTSSRGQGAQLNGYRLRGSTARDLDGTVLATGFPFKMKQHAPAYMNIMTKLFTQCADFRRTGSAALDLAYVAAGRVDGYFEIGLKPWDFAAGELLVREAGGLVTDFTGNHGYLLSGNLVAGNPRVVKSMLSNMRDELSEALKR
>NZ_CP045720.1|WP_003848663.1|1061016_1061769_+|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLYLVNPLVKPDSQAISLAAGASDVIGEAKIVDSLDEAIAGCSLVVGTSARSRSLPWPMLDARECGVKSVEEGQQAPVALVFGRERVGLTNEELQKCHYHVAIQANPEYSSLNLAMAVQIIAYEVRMAWLQSQEQASPAPKYEESPYPLVDDLERFYQHMEQMMLNSGFIREANPGQVMSKLRRLYTRARPERDELNILRGMLSSFEKRKNEKKEADNS
>NZ_CP045720.1|WP_140915733.1|1061899_1062397_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTSKGRYAVTAMLDVALHSHEGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKESSTISVGEVIIAVDESVDATKCQGKEGCQGGERCLTHVLWRDLSVRISEFLNNITLAELVNNQEILDVADRQNAIDNRRFQSPRSQGINVNQRAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045720_1	1.1\|1051593\|46\|NZ_CP045720\|CRISPRCasFinder	1051593-1051638	46	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	450695-450740	3	0.935
NZ_CP045720_1	1.1\|1051593\|46\|NZ_CP045720\|CRISPRCasFinder	1051593-1051638	46	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	116013-116058	3	0.935
NZ_CP045720_1	1.1\|1051593\|46\|NZ_CP045720\|CRISPRCasFinder	1051593-1051638	46	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	539537-539582	4	0.913
NZ_CP045720_1	1.1\|1051593\|46\|NZ_CP045720\|CRISPRCasFinder	1051593-1051638	46	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	15104-15149	4	0.913
NZ_CP045720_1	1.1\|1051593\|46\|NZ_CP045720\|CRISPRCasFinder	1051593-1051638	46	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	267195-267240	4	0.913

1. spacer 1.1|1051593|46|NZ_CP045720|CRISPRCasFinder matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 3, identity: 0.935

agtacgcacctcgtccctgaggtgcgcccgttgccgggccaacgct	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgct	Protospacer
* **********.******************* *************

2. spacer 1.1|1051593|46|NZ_CP045720|CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 3, identity: 0.935

agtacgcacctcgtccctgaggtgcgcccgttgccgggccaacgct	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgct	Protospacer
* **********.******************* *************

3. spacer 1.1|1051593|46|NZ_CP045720|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 4, identity: 0.913

agtacgcacctcgtccctgaggtgcgcccgttgccgggccaacgct	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcg	Protospacer
* **********.******************* ************

4. spacer 1.1|1051593|46|NZ_CP045720|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.913

agtacgcacctcgtccctgaggtgcgcccgttgccgggccaacgct	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcg	Protospacer
* **********.******************* ************

5. spacer 1.1|1051593|46|NZ_CP045720|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 4, identity: 0.913

agtacgcacctcgtccctgaggtgcgcccgttgccgggccaacgct	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcg	Protospacer
* **********.******************* ************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1762718 : 1825805

Erwinia_phage(21.05%)

tRNA,holin,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008925363.1\|1762718_1763687_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_003849187.1\|1763683_1764412_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA
WP_003849188.1\|1764493_1764889_-	membrane protein	NA	NA	NA	NA
WP_003849190.1\|1764958_1765780_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	2.7e-49	70.9
WP_003849194.1\|1765991_1767770_+\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.8e-11	26.4
WP_003849197.1\|1767769_1768201_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_140915472.1\|1768486_1769230_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003849205.1\|1769264_1769792_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	3.8e-09	32.4
WP_003849207.1\|1769888_1770503_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_140915471.1\|1770511_1771516_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.8e-07	25.9
WP_003849211.1\|1771516_1772302_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_003849212.1\|1772298_1773054_-	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-13	29.0
WP_003849214.1\|1773131_1774079_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_008925361.1\|1774092_1775424_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	4.8e-16	40.9
WP_008925360.1\|1775549_1776524_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_003849218.1\|1776649_1777882_-	MFS transporter	NA	NA	NA	NA
WP_003849220.1\|1777966_1779409_-	pyruvate kinase	NA	NA	NA	NA
WP_003849221.1\|1779516_1780395_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003849222.1\|1780758_1782234_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.2e-77	36.1
WP_003849225.1\|1782448_1783087_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_033761624.1\|1783121_1784300_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_140915483.1\|1784465_1785122_+	DUF533 domain-containing protein	NA	NA	NA	NA
WP_008925355.1\|1785247_1787311_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_003849233.1\|1787304_1787973_-	exodeoxyribonuclease X	NA	NA	NA	NA
WP_008925353.1\|1787972_1788206_-	DNA polymerase III subunit theta	A0A077SLL5	Escherichia_phage	9.2e-16	65.2
WP_078804482.1\|1788357_1788735_+	copper homeostasis periplasmic binding protein CopC	NA	NA	NA	NA
WP_078804481.1\|1788739_1789615_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_003849240.1\|1789643_1789991_+	YebY family protein	NA	NA	NA	NA
WP_140915470.1\|1790860_1791394_+	hypothetical protein	NA	NA	NA	NA
WP_003854558.1\|1791411_1791852_+	hypothetical protein	NA	NA	NA	NA
WP_008925349.1\|1791906_1792299_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	7.2e-13	54.7
WP_140915469.1\|1792298_1793531_-\|tail	phage tail protein	F1BUP1	Erwinia_phage	4.1e-78	81.7
WP_008925347.1\|1793527_1794136_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	5.6e-97	83.7
WP_003854584.1\|1795493_1795793_-	DUF1493 family protein	NA	NA	NA	NA
WP_008925343.1\|1796649_1796826_-	hypothetical protein	NA	NA	NA	NA
WP_140915468.1\|1796935_1799164_-	replication endonuclease	F1BUS0	Erwinia_phage	2.5e-304	71.4
WP_140915482.1\|1799163_1799337_-	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	1.9e-10	64.7
WP_140915467.1\|1799673_1800114_+	hypothetical protein	NA	NA	NA	NA
WP_003852659.1\|1802372_1803395_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	4.8e-24	25.3
WP_003852660.1\|1803600_1803738_+	hypothetical protein	NA	NA	NA	NA
WP_003852661.1\|1803820_1804006_-	hypothetical protein	NA	NA	NA	NA
WP_008925336.1\|1804235_1805378_-	acyltransferase	Q6QI96	Burkholderia_phage	2.1e-36	31.9
WP_140915466.1\|1805577_1805907_-	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_140915465.1\|1805893_1806244_-	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_140915464.1\|1806678_1808361_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	9.3e-57	30.9
WP_003852666.1\|1808384_1809857_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_110411350.1\|1809871_1810465_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_003852668.1\|1810720_1812751_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	9.9e-21	26.0
WP_110411351.1\|1812892_1814242_+	MFS transporter	NA	NA	NA	NA
WP_003852670.1\|1814387_1814600_+	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_003852671.1\|1814877_1815525_+	Ren protein	K7P6H8	Enterobacteria_phage	2.5e-55	49.5
WP_140915481.1\|1815526_1816960_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_003852673.1\|1817258_1819892_-	PqiB family protein	NA	NA	NA	NA
WP_003852674.1\|1819860_1821105_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_003852675.1\|1821318_1821819_+	GAF domain-containing protein	NA	NA	NA	NA
WP_003852676.1\|1821915_1822620_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_003852677.1\|1822639_1824679_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	7.2e-88	34.7
WP_003852678.1\|1824923_1825805_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_2

2291387 : 2301610

Bacillus_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003853251.1\|2291387_2291846_-	endopeptidase	A0A217EQL1	Bacillus_phage	5.5e-12	38.4
WP_003853253.1\|2291914_2292664_-	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	NA	NA	NA
WP_008926185.1\|2292664_2293210_-	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	5.9e-13	35.8
WP_008926184.1\|2293259_2294243_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_003853259.1\|2294421_2294724_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.3e-13	40.0
WP_105099235.1\|2294728_2297116_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.1e-10	32.0
WP_003853264.1\|2297130_2298114_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	2.9e-34	37.6
WP_106120997.1\|2298261_2298306_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_003853267.1\|2298428_2298785_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004157374.1\|2298829_2299027_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_033732471.1\|2299126_2299678_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.7e-15	32.9
WP_008926181.1\|2299681_2301610_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	6.3e-126	36.8

DBSCAN-SWA_3

2547396 : 2558163

uncultured_Caudovirales_phage(22.22%)

integrase

attL 2544687:2544700|attR 2558286:2558299

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2544687:2544700	attL	NA	NA	NA	NA
WP_153574575.1\|2547396_2547753_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.4e-49	77.0
WP_153574576.1\|2548250_2549546_+	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_140915892.1\|2549707_2550520_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	1.7e-77	62.2
WP_140915891.1\|2550532_2551465_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	8.9e-94	62.2
WP_140915890.1\|2551461_2551650_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_140915889.1\|2551899_2552388_-	DNA-binding protein	A0A1C9II13	Salmonella_phage	4.6e-65	71.6
WP_140915888.1\|2552380_2552605_-	hypothetical protein	NA	NA	NA	NA
WP_140915887.1\|2552691_2553327_+	helix-turn-helix domain-containing protein	A0A1B0Z078	Pseudomonas_phage	6.9e-05	38.7
WP_140915886.1\|2553768_2554173_+	hypothetical protein	A0A248SL59	Klebsiella_phage	1.6e-15	42.2
WP_140915885.1\|2554183_2554639_+	hypothetical protein	NA	NA	NA	NA
WP_140915884.1\|2554593_2555274_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	2.0e-119	87.4
WP_140915883.1\|2555432_2555684_+	excisionase	NA	NA	NA	NA
WP_140915882.1\|2555658_2556792_+\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	1.9e-154	74.2
WP_008925947.1\|2556912_2558163_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	9.7e-19	87.0
2558286:2558299	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3158447 : 3166173

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_136196561.1\|3158447_3158918_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.2e-31	49.3
WP_140916015.1\|3159008_3160109_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	7.4e-47	33.7
WP_003852514.1\|3160112_3160562_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_003852513.1\|3160748_3161186_+	peptidoglycan-binding protein LysM	G3MBQ1	Bacillus_virus	7.3e-06	50.0
WP_140916016.1\|3161202_3161781_+	DUF3251 domain-containing protein	NA	NA	NA	NA
WP_003852511.1\|3161840_3162809_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.6e-45	39.9
WP_071778534.1\|3162819_3164667_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_003852509.1\|3164692_3165025_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-11	37.4
WP_003852508.1\|3165024_3166173_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.3e-90	46.4

DBSCAN-SWA_5

3224721 : 3234085

Streptococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003854408.1\|3224721_3224934_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	9.3e-23	71.4
WP_105099456.1\|3225310_3227065_-	amylovoran biosynthesis protein AmsF	A0A1S6L3G8	Erwinia_phage	1.4e-153	46.5
WP_105099457.1\|3227268_3227562_-	hypothetical protein	NA	NA	NA	NA
WP_008924848.1\|3227558_3227906_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	8.3e-21	46.5
WP_003854415.1\|3227902_3228370_-	glycoside hydrolase family protein	H9C148	Vibrio_phage	1.2e-25	43.3
WP_003854417.1\|3228573_3228852_-	hypothetical protein	NA	NA	NA	NA
WP_008924846.1\|3229274_3230006_-	chromophore lyase	A0A2I6PIE7	Escherichia_phage	5.4e-46	37.5
WP_105099458.1\|3230366_3231620_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	7.8e-93	44.1
WP_008924844.1\|3231630_3232734_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.0e-59	42.4
WP_008924843.1\|3232972_3234085_+	porin OmpC	Q1MVN1	Enterobacteria_phage	2.1e-110	56.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045721

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045723

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP045720

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection