CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	0 crisprs	csa3	0	0	0
NZ_CP045729	Lactobacillus gastricus strain LG045 chromosome, complete genome	2 crisprs	csa3,cas3,DinG,DEDDh,csn2,cas2,cas1	4	8	3
NZ_CP045731	Lactobacillus gastricus strain LG045 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045729_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045729_1

546038-546136

Unclear

Consensus_repeat	Method
ATAGCGGGTTTACGGAGCCCATT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP045729_1

>merge|NZ_CP045729|1|546038-546136|CRISPRCasFinder
ATAGCGGGTTTACGGAGCCCATTGAAAAAACCGGGATTTTTAGCGGGTTTACAGTCCTATTACAAAACTGGAACTTATAGCGGGTTTGCGGAGCCCATT

>NZ_CP045729|1|1|546038-546136|CRISPRCasFinder
ATAGCGGGTTTACGGAGCCCATT	GAAAAAACCGGGATTTTTAGCGGGTTTACAGTCCTATTACAAAACTGGAACTT
ATAGCGGGTTTGCGGAGCCCATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045729.1\|WP_007122572.1\|544135_545974_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|372624
NZ_CP045729.1\|WP_056936817.1\|540042_540900_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP045729.1\|WP_153672810.1\|549243_549471_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP045729.1\|WP_056936824.1\|549613_550156_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|224461
NZ_CP045729.1\|WP_082601315.1\|546256_546388_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372841
NZ_CP045729.1\|WP_056936828.1\|551643_552288_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_CP045729.1\|WP_056936822.1\|547502_548804_+\|DNA/RNA-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|226583
NZ_CP045729.1\|WP_153672809.1\|548800_549238_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP045729.1\|WP_056936815.1\|539058_539496_-\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP045729.1\|WP_082601316.1\|546402_546795_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372841
NZ_CP045729.1\|WP_056936827.1\|550773_551568_+\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|237619
NZ_CP045729.1\|WP_056936825.1\|550241_550463_-\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
NZ_CP045729.1\|WP_056936812.1\|536185_537463_+\|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl\|CDD\|223587
NZ_CP045729.1\|WP_056936816.1\|539499_539946_-\|flavodoxin	unknown	unknown	gnl\|CDD\|180922
NZ_CP045729.1\|WP_056936826.1\|550479_550683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045729.1\|WP_007122573.1\|542384_544007_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP045729.1\|WP_056936813.1\|537637_537862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045729.1\|WP_056936814.1\|537903_538962_-\|ATP-binding-protein	unknown	unknown	unknown
NZ_CP045729.1\|WP_056936818.1\|540992_541889_+\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|377085
NZ_CP045729.1\|WP_056936819.1\|542077_542359_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988

Protein	Function_ID	Function_description	E-value
NZ_CP045729.1\|WP_007122572.1\|544135_545974_+\|APC-family-permease	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	1.25214e-31
NZ_CP045729.1\|WP_056936817.1\|540042_540900_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.73688e-124
NZ_CP045729.1\|WP_153672810.1\|549243_549471_+\|hypothetical-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	4.09263e-12
NZ_CP045729.1\|WP_056936824.1\|549613_550156_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	2.54028e-38
NZ_CP045729.1\|WP_082601315.1\|546256_546388_+\|hypothetical-protein	gnl\|CDD\|372841	pfam13958, ToxN_toxin, Toxin ToxN, type III toxin-antitoxin system. ToxN acts as a toxin, it is part of a type III toxin-antitoxin system. It acts as a ribosome independent endoribonuclease. It interacts with, and is inhibited by, the RNA antitoxin, ToxI. Three ToxN monomers bind to three ToxI monomers to create a trimeric ToxN-ToxI complex.	0.000321135
NZ_CP045729.1\|WP_056936828.1\|551643_552288_+\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	4.29808e-82
NZ_CP045729.1\|WP_056936818.1\|540992_541889_+\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	3.85688e-47
NZ_CP045729.1\|WP_153672809.1\|548800_549238_+\|hypothetical-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	9.46802e-17
NZ_CP045729.1\|WP_056936815.1\|539058_539496_-\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	6.05617e-13
NZ_CP045729.1\|WP_056936827.1\|550773_551568_+\|recombination-regulator-RecX	gnl\|CDD\|237619	PRK14135, recX, recombination regulator RecX; Provisional.	1.2143e-103
NZ_CP045729.1\|WP_056936825.1\|550241_550463_-\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	1.60701e-13
NZ_CP045729.1\|WP_056936812.1\|536185_537463_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	5.72992e-94
NZ_CP045729.1\|WP_056936816.1\|539499_539946_-\|flavodoxin	gnl\|CDD\|180922	PRK07308, PRK07308, flavodoxin; Validated.	1.7232e-47
NZ_CP045729.1\|WP_007122573.1\|542384_544007_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP045729.1\|WP_056936819.1\|542077_542359_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	1.95701e-43
NZ_CP045729.1\|WP_056936822.1\|547502_548804_+\|DNA/RNA-helicase	gnl\|CDD\|226583	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair].	4.97132e-148
NZ_CP045729.1\|WP_082601316.1\|546402_546795_+\|hypothetical-protein	gnl\|CDD\|372841	pfam13958, ToxN_toxin, Toxin ToxN, type III toxin-antitoxin system. ToxN acts as a toxin, it is part of a type III toxin-antitoxin system. It acts as a ribosome independent endoribonuclease. It interacts with, and is inhibited by, the RNA antitoxin, ToxI. Three ToxN monomers bind to three ToxI monomers to create a trimeric ToxN-ToxI complex.	1.02295e-16

>NZ_CP045729.1|WP_007122572.1|544135_545974_+|APC-family-permease
MWRYLKRLLIGKPLKTLDEGQANLTKFKGLALLSSDALSSVAYGTEQITTTLVALSTAAIWYSLPIAGIVLVLLFAITLSYRQIIRAYPNGGGAYVVATKNWGQNGGLIAGGSLLVDYMLTVAVSTTSGTEAITSAIPSLLPYSVPISVIIVIAIMMLNLRGLSESANFLTIPVYFFVIMIVVMIVWGLINIVTGHVAYNATADYGTPVAGMSAVLFIRAFSAGSSSLTGVEAISNAVPNFKEPKIKNAANTLAIMSLLLAAFFGGITFLSFYFGIVPNGRVTVLSQIGSAVFGGHGVAFYLLQLSTAMILAVAANTGFSAFPMLAFNMAKDKFLPHAFMDRGDRLGYSNGIIALAVGAIIMILIFHGETNMLIPLYAVGVFVPFTLSQSGMIIHWFREREGHWVSKSSINFVGAAISLALVCFLFWQHFWNVWPYLIIMPLLIWMFYKIHQHYLSVGEQLRVYEKTKVQLHDYDGATVIVLVGNVTRVTKGAINYARSIGDYVIAMHVSFDENPGKEHKTANEFKIEFPDVRFVDIHSSYRSVAQPTVRFVDIIAKRAADRNYSVTVLVPQFIPRKPWQRILHNQTSLRLRTILNSRENVIVSSYNYHLNK
>NZ_CP045729.1|WP_007122573.1|542384_544007_+|chaperonin-GroEL
MAKELKFAEDARAAMLRGVDKLADTVKTTIGPKGRNVVLEQSYGSPTITNDGVTIAKGIELEDHFENMGAKLVAEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIDLATKTAVEALKKMSHEVKTKDDIAQIASISAANPEVGTLIADAMEKVGNDGVITIEDSRGVETSVDVVEGMSFDRGYMSQYMVTDNDKMEADLDNPYVLITDKKISNIQDILELLQAVVQEGRSLLIIADDITGEALPTLVLNKMRGTFNVVSVKAPGFGDRRKEQLADIAVLTGGTVISDDLGMNLSDVTVAQLGQANKVTVTKDATTIVDGAGDKTAIAERVEQIKKAIAESTSDFDKEKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVQEGFVPGGGTALVNVIADLEKIEATGDEATGVNIVKAALEAPVRQIAENAGLEGSVIVNQLKNEKPGVGYNAAEDKFEDMVAAGIVDPTKVTRSALQNAASVSSLLLTTEAVVADKPEDNPAPAAPAGAGMPGMM
>NZ_CP045729.1|WP_056936819.1|542077_542359_+|co-chaperone-GroES
MLKPLGDRVVLKAEDEEQTVGGIVLASNAKNKPTTGTVVAVGPGKTLDNGQVRELSVKEGDKVLFDKYAGSEVEYNGDKYLVVHENDLVAVVD
>NZ_CP045729.1|WP_056936818.1|540992_541889_+|YihY/virulence-factor-BrkB-family-protein
MRNARQTVKRIIRTYLYHFQKARLSASAAELAYYTLLSIFPAILIVGNILPMVGLDAKTVLSYLETAIPTSVYNLISPVIYDLLHRGSGGLLTTGVVIAIWSTSQAIAAFQRDVNAAYGVAEDLNPIWNRIVSFLWILVVLVVIATLVFLYGLGEPILRNLQPILNFNTRYIHQFASYRYPVTFIGLFVGLLCLYYFVPNARVRLRFVALGSLVATFLLMGLARLLTYYGVLFNTQIASYKTISAFIVMMIWLDLSGIIVMIGATINATTQVLVEGKVQQRRYLWDFIKDKSNSDQPE
>NZ_CP045729.1|WP_056936817.1|540042_540900_+|type-I-methionyl-aminopeptidase
MISLKSSREIHDMEASGAVLAGMHIGMREIIKPGISSWVIEEFAREYFQDRGAVAAQIGFEGYEFATCVSVNDEICHGFPRKELILQEGDLVKVDTVVEYDGAFSDSCWSYAVGQVSPQIQDLMKVTKESLYLGIDAAQVGKRLGDIGAVIQHFTEDEHGYGDVRDFVGHGIGPTMHEDPMVAHYGIAGKGKRLQNGMTITIEPMINTGTWEADTSDPSGWVARTADGGWSCQYEHTIAITNDGPKILTSQDPQADAEYLLADYEELFTPHAEAAKRIAQHYQNK
>NZ_CP045729.1|WP_056936816.1|539499_539946_-|flavodoxin
MTKALVVFATITGNNEDVADIITSTFEERNVDVEMTEITLADAADFADVDICVVCPYTYDEGALPDEGLDFYEDLQETDLSGKVYGVAGSGDTEYGDDFCVAVDKFAEAFETAGATRGADLVKINLSPEGDDVIQLEKMVDQLIAQVK
>NZ_CP045729.1|WP_056936815.1|539058_539496_-|GtrA-family-protein
MLMELFSKYKSIIAYLFWGVVTTIINIASYQLMIMYTHLGVTAATSIAWFLSVFVAYLTNKVWVFGSHYTTVSDFLVECLLFFFYRALTLIIDLAFMNIGVHVFGFDSDLQQFILKVIDNVIVVIANYIFSKWLIFKDNRDIADK
>NZ_CP045729.1|WP_056936814.1|537903_538962_-|ATP-binding-protein
MTQNPFTLNFGKTPLTLIDRPQAINKVIDEFDAPLINNQIYVLSGIRGSGKTVTLTEIDKTLSQKDHWIVIELNSSRDLLQALASKLYQSPQLHKLYVDAKINLSFWGITANFEPSHQISDIEVAIDQLLKVARDRHYRILVSIDEVTNTPAMREFASAFQIFIRQDAPIFLLMTGLYENISDLQNDDNLTFLYRAPKIFLRPLNLTAISNEYQQIFNLPDPEAIKLAKLTKGYPYAFQLLGYLKWEHPELNELDLLNEFDANIQEYVYHKLWSEIMFNDQKVLIAMVKIQGNHAECRIKDLREELHYSSSLMSGCRDRLKKKGLVNTDHYGYLSFTLPRFDRYVEVYHLDD
>NZ_CP045729.1|WP_056936813.1|537637_537862_+|hypothetical-protein
MSKKNFRLVTGLIWLVLLLVGWLLFHISWWGYLLMIIWIGFAHVWLNRLRDDQVTSFTWLFVIVDVILLLIAMI
>NZ_CP045729.1|WP_056936812.1|536185_537463_+|DEAD/DEAH-box-helicase
MQLNERFQQHFQERGFEEPTLIQEQVFQPMLQDQDLLGIAPTGSGKTLAFAWPLLPKLMAQQGVQLVVLEPSQELAIQTSQVLREWGSLLGLSVQSLTGGANLKRQAERLKKGHPEVVVGTPGRVNHLLDERILKLHRVITVVVDEVDELLTDDSRDQVLRVIQVVPQEAQLALFSATSGELTNQLRDLFDRDFSVVDVRADDHSRGLVNHGLVKASTMSDKAAMLERLSHTKNFRALVFFTSIKTLHYTASRLQHAGVSVASLGGKQRQTEREEMLRKFRKRQVKLLLTTDVAARGLDIPKLPAVVNFELPNSADAYVHRTGRTGRQGEPGTVINLGNGHDFRDLKKLLAETEYVLKPMTIAKQRVMDQEKAKELVKPSPKAKVDSANKKTKGSITQSTPLKARKKKNRKNKGIRFKHRQKSQN
>NZ_CP045729.1|WP_082601315.1|546256_546388_+|hypothetical-protein
MRFCTINERYMEYLRSIDSRISKYNYGSDHYKPFSILFLRLII
>NZ_CP045729.1|WP_082601316.1|546402_546795_+|hypothetical-protein
MTSPKSKHRHMHSDIDFKKVFIDTNKRRGRYFSGAINLNLMFPVPTWCINDFNFSEMDQVKSFKNSKEKSKYISFLKHQLKSINQLNLPEAATKLYNYRYEHPESSVARRCLDFKQLEIFSKEYDDEIDK
>NZ_CP045729.1|WP_056936822.1|547502_548804_+|DNA/RNA-helicase
MEVSHFYGRQVLAYPCEMDNLPSEIQIIDPIEIRSTTIRCRRCNQIIKKPDAALPHHQYYCPTCINLGRVSTLAKFYHLPEPNQFEIPPTILTWQGQLSSLQTMAAQEVAASMAHHDHRLLWAVTGAGKTEMIFPGLAAAIKRGERLAIASPRVDVCLELYPRLQEAFANTKIALSHGRQPEQYHYWQLTICTTHQLLRFYQAFDNLIIDEVDAFPYASNEQLIYATHQAIKPTGGLLYLTATPGPALFKQIKKHQLKVSYLPLRYHGHLLPEIKVKRAGRWRHRLPKSLIQWIKHRLGKLEMLIFVPHVADLAYVETIFKEQIHQARFTTVHAADPQRLEKVQAMRDHQYDFLITTTILERGVTLPKIDVAVLGADDQVFSASALVQIAGRVGRSSERPGGDVTFWVQEPAVNVKEAQRQIKQMNRRGRHYQ
>NZ_CP045729.1|WP_153672809.1|548800_549238_+|hypothetical-protein
MKKCLLCHQDIQYQVPLSQLLFGPTPQEPSLCPDCQKRFRPRPQNGCQGCGRPCDRKLCNDCQLWQNEYGWVLKNHSLYHYDQAMKDFMRQYKFMGDYRLHQVFQEEITQKIQSLQPTLVVPIPATPHTLMTRALIKRRLYILAY
>NZ_CP045729.1|WP_153672810.1|549243_549471_+|hypothetical-protein
MLGHLQADKQPQTSKGRQARLSTPQPFVLTSSASLATEHIVLLDDIYTTGRTLYHAADLLRQAGCQDVQSVTLAS
>NZ_CP045729.1|WP_056936824.1|549613_550156_+|ribosome-associated-translation-inhibitor-RaiA
MLKFNIRGENIEVTDAIREYVEKRLSKLEKYLEENVPAEAHVNLKVYSNKTYKVEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQVRKYKTRVNRKAREKGLKDLEFVDTVDDEEPVSDLKIVRTKQISLKPMDSEEAVLQMDMLGHDFFVFEDADTNGTSIVYRRNDGRYGLIEVN
>NZ_CP045729.1|WP_056936825.1|550241_550463_-|DUF2922-domain-containing-protein
MKVLDLVFKSNLNKVHTLKLNYVNESLDEATVKAAMQAIADAKLFDKQGEELYVVPVLAKYVTTTDDVVVKSF
>NZ_CP045729.1|WP_056936826.1|550479_550683_-|hypothetical-protein
MQHTFSANKLQLTAINSHQEESIRRTFANLVENIDDAKLQSFLAALKTLTGDNVTDVQLSTVSKISE
>NZ_CP045729.1|WP_056936827.1|550773_551568_+|recombination-regulator-RecX
MKKITKIEAQKRLGRYNIYLNGQYAFPVAESVLIKYRLAKDLELDTATLEQITKDDQIAKAYGRMLDYLSHQLRTEAEVKQKLTDLETPPEMIDPVMEHLRSDRLLDDQVYADSYVRTVMHTELKGPQVIRQKLRQKGVGELVIDQALEQFDLNSQLENAQKLAQRLVKRYRHEPIRRQEEKVRQGLMTNGYSSDLYNQLKENLVLVRDEDQQSSLLATSGEKIWQRNRRYENLYERKMKTKQALYRKGFDLDAIDRWLAERDS
>NZ_CP045729.1|WP_056936828.1|551643_552288_+|sugar-transferase
MKTENKFQQKPSYLFFKRLTDIILSVVALVCFSPVFLAVWFKCQYGDNKGPIFFKQTRIGQYGRPFKIYKFRSMIVDADQVLHANQELYAKYVANNYKLEPEEDPRITRTGRFLRKTSLDEIPQFINIIRGEMSIIGPRPVVAEEVKIYGDRAEKFLSVKPGAMGLWQASGRSNIGYPERCDLELSYVDQASYWFDLKIMFKNIISIFTSEGAY

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Crispr_ID: NZ_CP045729_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045729_2

1660730-1661227

TypeII-A

Consensus_repeat	Method
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	CRISPRCasFinder
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	CRT
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	PILER-CR

7 spacers

csn2,cas2,cas1

The CRISPR arrays of NZ_CP045729_2

>merge|NZ_CP045729|2|1660730-1661227|CRISPRCasFinder,CRT,PILER-CR
TGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACAACAGAACACCACAGTCTTAACACGTTTGAGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACAGAGGATGCCGTCCTCGTGCTGCCAGCGGGGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACATCCTAACCCTTCACAAACCGTATAAACATGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACAGAACACAAATTGTCTGTTTATAGAACACAGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACGGTGTTTGGTGGTGTGTTTGCATGTTTGTGGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACAATAAAAATAATAAGGTCTATCAAGCAGTGGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACCAAGCACATCTAAACGATTATGCCCTAACGGGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC

>NZ_CP045729|2|2|1660730-1661227|CRISPRCasFinder
TGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AACAGAACACCACAGTCTTAACACGTTTGA
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AGAGGATGCCGTCCTCGTGCTGCCAGCGGG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	ATCCTAACCCTTCACAAACCGTATAAACAT
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AGAACACAAATTGTCTGTTTATAGAACACA
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	GGTGTTTGGTGGTGTGTTTGCATGTTTGTG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AATAAAAATAATAAGGTCTATCAAGCAGTG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	CAAGCACATCTAAACGATTATGCCCTAACG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC

>NZ_CP045729|2|1|1660730-1661227|CRT
TGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AACAGAACACCACAGTCTTAACACGTTTGA
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AGAGGATGCCGTCCTCGTGCTGCCAGCGGG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	ATCCTAACCCTTCACAAACCGTATAAACAT
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AGAACACAAATTGTCTGTTTATAGAACACA
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	GGTGTTTGGTGGTGTGTTTGCATGTTTGTG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	AATAAAAATAATAAGGTCTATCAAGCAGTG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC	CAAGCACATCTAAACGATTATGCCCTAACG
GGTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC

>NZ_CP045729|2|1|1660731-1661227|PILER-CR
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACA	ACAGAACACCACAGTCTTAACACGTTTGAG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACA	GAGGATGCCGTCCTCGTGCTGCCAGCGGGG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACA	TCCTAACCCTTCACAAACCGTATAAACATG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACA	GAACACAAATTGTCTGTTTATAGAACACAG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACG	GTGTTTGGTGGTGTGTTTGCATGTTTGTGG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACA	ATAAAAATAATAAGGTCTATCAAGCAGTGG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAACC	AAGCACATCTAAACGATTATGCCCTAACGG
GTCTTGAGGTCATTGAGTTGAAGCCCTTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045729.1\|WP_056937592.1\|1656774_1657764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP045729.1\|WP_056937584.1\|1667522_1667819_+\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_CP045729.1\|WP_056937578.1\|1675316_1675880_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP045729.1\|WP_056937590.1\|1658895_1659507_+\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|367957
NZ_CP045729.1\|WP_056937583.1\|1667820_1668135_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379750
NZ_CP045729.1\|WP_123383118.1\|1672984_1674226_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225420
NZ_CP045729.1\|WP_056937582.1\|1668182_1669268_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379062
NZ_CP045729.1\|WP_056937586.1\|1662207_1663113_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP045729.1\|WP_056937581.1\|1669429_1672972_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223627
NZ_CP045729.1\|WP_056937612.1\|1653200_1653965_-\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP045729.1\|WP_153672875.1\|1656590_1656740_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045729.1\|WP_056937587.1\|1661253_1661928_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP045729.1\|WP_007122265.1\|1661924_1662230_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP045729.1\|WP_056937594.1\|1654545_1655865_-\|guanine-deaminase	unknown	unknown	gnl\|CDD\|238628
NZ_CP045729.1\|WP_123383099.1\|1660051_1660225_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP045729.1\|WP_056937593.1\|1655883_1656594_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045729.1\|WP_056937588.1\|1660371_1660662_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045729.1\|WP_056937589.1\|1659627_1660026_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family-protein	unknown	unknown	gnl\|CDD\|374224
NZ_CP045729.1\|WP_056937579.1\|1674562_1675300_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|374270
NZ_CP045729.1\|WP_056937591.1\|1657865_1658201_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045729.1\|WP_056937592.1\|1656774_1657764_-\|hypothetical-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	0.000305476
NZ_CP045729.1\|WP_056937582.1\|1668182_1669268_-\|ATP-binding-protein	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	0.000560619
NZ_CP045729.1\|WP_056937578.1\|1675316_1675880_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.67414e-09
NZ_CP045729.1\|WP_056937590.1\|1658895_1659507_+\|DUF559-domain-containing-protein	gnl\|CDD\|367957	pfam04480, DUF559, Protein of unknown function (DUF559).	0.00107646
NZ_CP045729.1\|WP_056937587.1\|1661253_1661928_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	7.70253e-94
NZ_CP045729.1\|WP_056937583.1\|1667820_1668135_+\|hypothetical-protein	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.39595e-10
NZ_CP045729.1\|WP_123383118.1\|1672984_1674226_-\|AAA-family-ATPase	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.10323e-61
NZ_CP045729.1\|WP_056937581.1\|1669429_1672972_-\|hypothetical-protein	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.17809e-106
NZ_CP045729.1\|WP_056937612.1\|1653200_1653965_-\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	1.29139e-32
NZ_CP045729.1\|WP_056937584.1\|1667522_1667819_+\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	2.73578e-10
NZ_CP045729.1\|WP_007122265.1\|1661924_1662230_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.25219e-26
NZ_CP045729.1\|WP_056937594.1\|1654545_1655865_-\|guanine-deaminase	gnl\|CDD\|238628	cd01303, GDEase, Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.	2.99648e-133
NZ_CP045729.1\|WP_123383099.1\|1660051_1660225_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	0.00302567
NZ_CP045729.1\|WP_056937586.1\|1662207_1663113_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.38189e-102
NZ_CP045729.1\|WP_056937589.1\|1659627_1660026_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family-protein	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	9.74672e-09
NZ_CP045729.1\|WP_056937579.1\|1674562_1675300_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|374270	pfam15983, DUF4767, Domain of unknown function (DUF4767). This domain family is found in bacteria, and is approximately 140 amino acids in length. There is a single completely conserved residue Q that may be functionally important.	5.45355e-47

>NZ_CP045729.1|WP_056937588.1|1660371_1660662_+|hypothetical-protein
MMKPEDKKKIMHRRWTITGIIVIILITWLQLWSLVWLIFCGLLMIMGVMWFIEWITGMDLDTPVKRQHDNQPSDIEETMWDIETFHELHHHDDKNE
>NZ_CP045729.1|WP_123383099.1|1660051_1660225_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MQRFKLEKLFRRNGWYLYRHGGNHDIWTDGREKEKLPRHPEINERLARSLIHKHQLK
>NZ_CP045729.1|WP_056937589.1|1659627_1660026_-|toxin-antitoxin-system,-antitoxin-component,-HicB-family-protein
MYKKDKVVVYPIVIKYEPDGSEYPYLVTIPDLDGGMTQGKSVADAIAMAEDFIGTTSLDEELPPSNYLLPKVDGDEIVTLVRVNVSEYRRKNDNRVVRKSVTIPNYLNEIGMEQKINFSEVLTNALKNKLNV
>NZ_CP045729.1|WP_056937590.1|1658895_1659507_+|DUF559-domain-containing-protein
MVKEWGFVRETKELADKAGIDKDTGICRTGLEEYLAVIFPDVDDWVHDKTTGLLKDDGKKSRVRPDYRSEQLKMIVEYDGLPHYTSPDQWEKDESNQAFYESYGYKVIRVPYFIQLTNAVVEKLFGIRVGEPLFDGATPSIGPKGRNTPAYLCPAGIRRMAGEFIKFPEQYQVNIDSLKRENDYSKTEYKLLESEYNRQNGKQ
>NZ_CP045729.1|WP_056937591.1|1657865_1658201_-|hypothetical-protein
MVKFDADSHLSDLIQPAELYDWIFNSKWKTQSLEMVHTDLFLLKYPDGEIFLADMGNDRMTSTYLGNKEGDLQTIVTNLWEYIEINKDEIVKRVQATNRLEDQMYNSKPKE
>NZ_CP045729.1|WP_056937592.1|1656774_1657764_-|hypothetical-protein
MHSKRWGLNILLIIAFVAVISGILSQYHWRFPYGQELLSERFSTTQAIKQPSIITNQVAKRTAQLAIFRLPNETKLIFDYQAADSLQNEGGAPVTNATLIPGLRGTRSIITLSQQVGISGGLVPQGIAYSPKYIFISAYDGAYKVNSVIYVINRQTMRYEKTLVLHGQPHTGGIAYDADHQRLWVCGYSHREATLFSINLATIEHYQFKSQHQPIQYASLTYLPQLKRSSQVTYYQHRLYVGYFSKGGSRPPASISAQHEWLLSRPSESNKQTIREGFYCDFDSFEPNLPDPNPRDDNCGWHDLNVAILRSSKFKTLCLQIIKAGERLY
>NZ_CP045729.1|WP_153672875.1|1656590_1656740_-|hypothetical-protein
MMEQIGNEDGQLYAVFESGGRRYRDKYGVGVDRILTFDLTTLLNNEVTR
>NZ_CP045729.1|WP_056937593.1|1655883_1656594_-|hypothetical-protein
MSKHKFNLPASTQWILLIGMGALVATILNTDNPIMRYYNVPRDLFLSEGTTGDYLYIIGLALCLFLVAVVLRWMLVGSDQPQRRAFKWWQYGLALIVTIMVTIGLQGYMALYPDPALLLVPDTTNDLQYLNVYYWTLIAVVNLAFFTWAWLLAMSASQLLARQHLSWVIQLVVAIVIFATARLMNMDGSYGYQLVVNLLMVLPLLVWSIYTRRIWTGLISLWVVYEAVIYLLFITR
>NZ_CP045729.1|WP_056937594.1|1654545_1655865_-|guanine-deaminase
MIKTVLQGDFYTAVDPQTVAYHAQALIVIDQSGMIERIIESTDADYQTSRQAAQIKDQLVEVPKGQVILPGFIDLHLHAPQWPQAGLALDKPLANWLNDYTFPLEAKYRDLAYAKQVYPDLVQNLLANGTTTVLFFGTIHNPANLVLAQACMDHGLRALIGRVAMDNPEQTPDYYRDASSQVALQATEDFIQQLTALGQGQALAPIPVITPRFVPSCTPTTLQGLGKLAAQYDLPIQSHLSESDWEHHYAIEHYGHHDANVLDHFGLLTDRAVMAHATQLTLTDEQLVADRHTAIAHCPISNAYFGNGTLATRRLMDRGIKLGLGSDISGGYSVSLYDNLRQAVTVSQMRTDGVTNQDQGEADARISIRNAFYLATVGGGQSLHLPIGQIAPGFQADLQLVQERPLAPSDPIERLERLLYQTQSNHIQAVMVNGDFVKV
>NZ_CP045729.1|WP_056937612.1|1653200_1653965_-|AzlC-family-ABC-transporter-permease
MPLCLSYAPIGLACGILLHAAGFNFIMAFLVSILVYSGGAQFILASMLVINAPLSTIFMTIFFLEMRYALLGSSLSKYLHEDKPWDVFLFAFSLNDENYAINYLKYATDKNWTIKDATMVEHFALISWTGGNLIGALVGSTVSIDLDIIEFALTALFIYMLVMQVRNHLTLLICLLAGALSVLFLVLIQNTLGLIISTLMASLIGFAVEDYVRKHSKHPKRTWILGEIFRPSTIRQTVEDKRKKQDQSQEAANH
>NZ_CP045729.1|WP_056937587.1|1661253_1661928_-|type-II-A-CRISPR-associated-protein-Csn2
MKVVYESHQTIDVKLGKITVLATNNQIVYLELLRGMKDMNELIHFYDDDYKEVDHNKAMDWDGDVVADLSLEKTYSTEIIKYIDQSLTDEERRQLDQAGLEFYTAIQDKLLMVDIPLEVSFDGDIKRMMKYTQIHFPKEINNDPYGIIEADLKIHLECDDQSIIGLTNVAHYLTPDQVSHLVEINDHLQTKVLLVEFTESRNQDAYPNCDYYYIDEDFVDWGSN
>NZ_CP045729.1|WP_007122265.1|1661924_1662230_-|CRISPR-associated-endonuclease-Cas2
MRLMVMFDLPVETSQQRRAYRVFRKKLIQEGFLMIQYSVYVRVCVNRKAAQFMEKRISNFLPENGLVQTLMLTEKQYNDMHFLLGEEKDEVRNSSARTVIL
>NZ_CP045729.1|WP_056937586.1|1662207_1663113_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSVVITQHAKISYSANMIIVQTRDGINQIPVSDIDVLLIDTTQAVITTAVIAELANRETKIIFTDKRHQPITESVNYYPNNRSAEMLLRQVNWDQNREDILWTKIVSYKIRNQIKVLEVYNQPTDEIESELDKLEVGDLTNREAVIARKYFPLLFEDKFSRRDESSVNAALNYGYSILLSMMNKEIVTRGNLTYLGIHHHSSENEFNLGSDLMEPFRPVIDYWVAAQKFNEFTPDVKYGLVDALNLEIIYNGQKMLLRNVIPKYVQTCLDYLDENRDELEIEVEFTNEVPHHALNGHV
>NZ_CP045729.1|WP_056937584.1|1667522_1667819_+|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MTTVSMNFKADKDTKLKFDKVANQLGISSSALLNLFVTRVARDEAIPFKVEVTPDKSMTLDDESLTEMVKVMAIEKGLIPDDGTEITDVDKYFKGLGY
>NZ_CP045729.1|WP_056937583.1|1667820_1668135_+|hypothetical-protein
MYKLISTKIFDKRLRNLKRILRLSDSDVKEAIEEIKYTLSELQQNGTLPPEFSPHELTDDPWKGWQEYHILDDLLVVNLKVEKNHIIWLTTITTHHELRKGPFK
>NZ_CP045729.1|WP_056937582.1|1668182_1669268_-|ATP-binding-protein
MNPFNPSFGKVPPIFLDRDQQVAQVVEGLQNINSPFQTTLIYGIRGAGKTSFLTDVSKQIKQKDDWIVVNLAMDGELISTSIASIYDQATSSLKKILDQIVGIEFSVFGIQTTINTGGKTHVDEKIILENMLRQVTKQGLHVLITLDEVRSTEAVRKFILIYQILSREELNVSLIMTGLPNHVSELQNDDVLTFLLRSARVNLSPLDALTVRYSYQKAFIEGGKSIDDDALELMTKLTVGYAYAFQLLGYLVWETSDQIDISTVQSVVPQYQMDLTRNVYLKIYQSLSPTDQLFVQTMAQMDGDQFSVGEIGQRMQKPKNYVSMYRRRLLDDQIITSSQHGYVRFALPLFKQFVNDYQEYY
>NZ_CP045729.1|WP_056937581.1|1669429_1672972_-|hypothetical-protein
MPKVLGLSFTPRIFERGQEYFEKGKVGPIEWDEQIFSATVQGSSDHEYRVRGILDEQQIKWITCNCPYAEDHELCKHMAAVAVALDHQGQVDPDKVLPLGDLLPTSWTEQLEIMAKTTPFITKLLASPHQVDKLRQAVKLYDDRHVVLEEQYHPKGQDKFEYMTLIMIDRVPHQVTIKYDGQKMDYFIGPQRRDDDLDLFAGVATVSLCNYYLAHQPKAETNQAGSYLLDMFDLASNHDRQLIRPYIELDYYSERTRLNFKVGTSDHMYKLQRPEVFVTVVKRGEPVILGKYFNQVIDLESLDEDSRYWFDFMDEMTAMYNTLTDQKHNYGSTDMYLMVEDVIADRVDDALASGREVYIDNRLNQLVNYSVDDRKLTADLGLELINDQPMLTMQLENLPDKDLIRGHERYYDFNGRDWVAYPNLNPTQISQAGLANHDHYTFDASNLNAFYRQVLPKIKDKVDLTLNEDPQIDQYILPDAKFTFKFDLAADAIEGQAMVQYQDQVYSLFEQLADDSQRDPTQEAPVKDVLVQYFPIEAVRQGRLILPLEEDQQVVAFLSQGLKRLEDFGEVQVTKPFQRLIGQIDHKPNLTVGISLESGLLNLSVAGEAMDSADIAQALRAYHERRPYFKLKNGDYMGVKSSTLTTLAQTLEDLGVDADQVDQGDISLPAYQALALNQSLQEQNDLTYQTDDHYAKLIRDFNQNQVGSFTVPQDLQAKLRPYQLAGFQWLMTLNHYHFGGLLADEMGLGKTIQIITLLLAINQEQKLPSLVVAPASVVYNWQDEFHKFAPSLKIATLGGGKVERRKLLAKSDRYDVFITSYDTLKRDIVLYDQLEFQVQIIDEAQTIKNARTIGAQTVKLIQAQQRFALTGTPIENRLSELWSIFDYLMPGFLGTYQRFSKRFEEPIIFNDDQAKRAQLSQLIGPFVLRRLKKDVLTSLPAKTEIIEYAEMSGAQLKLYRARADQLIKRIQTSDETDFKGDKIEILAELTRLRQVCCDPHLVYDDYKGKSAKLTQTIALIKDQIENGHKILLFSQFTSMLDIIAQRLQKERIQTEMITGAVDKQERQRRVKQFNEQDEPAVFLISLKAGGTGINLTSADVVIHYDPWWNAAAQNQATDRAHRIGQENPVTIYQMITKHTVEERIKELQDKKQALADQVLSGDQMSTTSFDKDELLAILEE
>NZ_CP045729.1|WP_123383118.1|1672984_1674226_-|AAA-family-ATPase
MKETRVLEFKATVSNTFLKTVSAYANYGTGQIKFGINDEGQVIGIDNPKQTCLDIENRINDSISPQPNYSLSIDNDKIIILEVQEGMEKPYLYKGKAYKRNDTASIPVSRGELNRLTLIGVSSSYDEQPAMVDDLKFTQLRQELLEKAGIDQFNQDILKTLNLYSESSGYNHAAELLADENQFAGIDMVRFGQNESEIRKRKTINHISILTQFHRSITAFRDYYEYEVIKGINREKRQSIPIEAFREAIANTLVHRTWDVAANIQVSMYENRLEVVSPGGLPFGISEAEYLKGYISVPRNPILANVFFRLNYIEMFGTGIKRIQAAYQDSLQQPQFFITENAIRVVLPVVDNQNLTADESLVLEQFTDENLSKRDLVELTGLSSSKINRLLKKLTEENLLIRVGAGRSTKYHH
>NZ_CP045729.1|WP_056937579.1|1674562_1675300_-|zinc-ribbon-domain-containing-protein
MNFCGKCGTKLAPDDAFCPQCGQPVQGGNPSRANYQTKPHHKGGWLALVLVLIVAVGLGFWWFQRPNTSQSALTSSSTSSTSQSSATSSEQSVSSSSTSSSASLWNTSKDQALANFMASWAPKMGQSYVKYDGTNSIRSAPGSTYPDDFDKAYFQSTPAKGAGDGTETKISMGWAPTGQGPYDYNVVAIYNYNSGKLVGRITYAFCVHNGQPVALVNQTTNGNDVWTVTQNQDVSSNFAKIFNEN
>NZ_CP045729.1|WP_056937578.1|1675316_1675880_-|TetR/AcrR-family-transcriptional-regulator
MFKHSQNQLVTQSQQRISQAMMKLLATEPFAELTVTQICQEAEVGRRTFYRNFDDKMDVIAFYLYDEMQRERKANRPADLSEAMQKAFVFIYHHQETFKLLDLNDLLPQLQRIIKNLIQNHINELENKLHAMGIEDKIAYYVNFTANTIYSNIELWVGSDFKESPDEIAQLTVNFLSGLRVAKPNCN

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045729_2	2.6\|1661096\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1661096-1661125	30	NZ_CP045729.1	42841-42870	0	1.0
NZ_CP045729_2	2.13\|1661097\|30\|NZ_CP045729\|PILER-CR	1661097-1661126	30	NZ_CP045729.1	42841-42870	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP045730.1	13703-13732	1	0.967
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP045730.1	13703-13732	1	0.967

1. spacer 2.6|1661096|30|NZ_CP045729|CRISPRCasFinder,CRT matches to position: 42841-42870, mismatch: 0, identity: 1.0

aataaaaataataaggtctatcaagcagtg	CRISPR spacer
aataaaaataataaggtctatcaagcagtg	Protospacer
******************************

2. spacer 2.13|1661097|30|NZ_CP045729|PILER-CR matches to position: 42841-42870, mismatch: 0, identity: 1.0

aataaaaataataaggtctatcaagcagtg	CRISPR spacer
aataaaaataataaggtctatcaagcagtg	Protospacer
******************************

3. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to position: 13703-13732, mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccgcagtcttaacacgtttga	Protospacer
***********.******************

4. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to position: 13703-13732, mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccgcagtcttaacacgtttga	Protospacer
***********.******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	14670-14699	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	34815-34844	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	54963-54992	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP041212	Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence	46325-46354	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP042373	Lactobacillus malefermentans strain CBA3618 plasmid unnamed2, complete sequence	9449-9478	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP053341	Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence	9983-10012	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_022045	Listeria monocytogenes strain N1-011A plasmid, complete sequence	65918-65947	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_017018	Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7, complete sequence	7845-7874	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP012281	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence	1480-1509	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP042385	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed2, complete sequence	13883-13912	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014921	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-6, complete sequence	2288-2317	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP035024	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD	5868-5897	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP035024	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD	42908-42937	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP016492	Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence	6997-7026	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_018699	Leuconostoc carnosum JB16 plasmid pKLC4, complete sequence	18823-18852	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_AP018407	Lactobacillus plantarum strain SN35N plasmid pSN35N-2, complete sequence	19833-19862	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_AP018409	Lactobacillus plantarum strain SN35N plasmid pSN35N-4, complete sequence	43151-43180	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_008502	Lactobacillus paracasei ATCC 334 plasmid 1, complete sequence	2850-2879	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP020733	Leuconostoc mesenteroides subsp. mesenteroides FM06 plasmid pLm2, complete genome	6421-6450	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP017698	Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 plasmid pLDW-4, complete sequence	22815-22844	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_015701	Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence	17327-17356	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_021503	Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence	47777-47806	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014901	Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence	20443-20472	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_MH382833	Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence	1171-1200	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014896	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-6, complete sequence	10867-10896	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP020834	Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence	25321-25350	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP013153	Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence	9470-9499	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP022021	Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence	83288-83317	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP030090	Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence	20450-20479	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_022123	Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2, complete sequence	24433-24462	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_021234	Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4, complete sequence	34948-34977	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP021461	Lactobacillus brevis strain ZLB004 plasmid p5, complete sequence	42175-42204	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP042386	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed3, complete sequence	18409-18438	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014930	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-6, complete sequence	19799-19828	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP029547	Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence	66641-66670	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014875	Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence	13747-13776	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014627	Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence	16482-16511	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP018765	Pediococcus acidilactici strain BCC1 plasmid pbcp2, complete sequence	8418-8447	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP019983	Pediococcus inopinatus strain DSM 20285 plasmid pLDW-13, complete sequence	22371-22400	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_016821	Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence	4958-4987	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP035748	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed2, complete sequence	13271-13300	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP035750	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed4, complete sequence	17105-17134	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP047122	Lactobacillus hilgardii strain FLUB plasmid unnamed1	7704-7733	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP014603	Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence	23640-23669	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP028237	Lactobacillus plantarum strain SRCM101511 plasmid unnamed2, complete sequence	37170-37199	0	1.0
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	932-961	0	1.0
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	954-983	0	1.0
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3398-3427	0	1.0
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3420-3449	0	1.0
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3442-3471	0	1.0
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3464-3493	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	14670-14699	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	34815-34844	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	54963-54992	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP041212	Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence	46325-46354	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP042373	Lactobacillus malefermentans strain CBA3618 plasmid unnamed2, complete sequence	9449-9478	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP053341	Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence	9983-10012	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_022045	Listeria monocytogenes strain N1-011A plasmid, complete sequence	65918-65947	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_017018	Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7, complete sequence	7845-7874	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP012281	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence	1480-1509	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP042385	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed2, complete sequence	13883-13912	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014921	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-6, complete sequence	2288-2317	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP035024	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD	5868-5897	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP035024	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD	42908-42937	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP016492	Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence	6997-7026	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_018699	Leuconostoc carnosum JB16 plasmid pKLC4, complete sequence	18823-18852	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_AP018407	Lactobacillus plantarum strain SN35N plasmid pSN35N-2, complete sequence	19833-19862	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_AP018409	Lactobacillus plantarum strain SN35N plasmid pSN35N-4, complete sequence	43151-43180	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_008502	Lactobacillus paracasei ATCC 334 plasmid 1, complete sequence	2850-2879	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP020733	Leuconostoc mesenteroides subsp. mesenteroides FM06 plasmid pLm2, complete genome	6421-6450	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP017698	Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 plasmid pLDW-4, complete sequence	22815-22844	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_015701	Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence	17327-17356	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_021503	Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence	47777-47806	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014901	Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence	20443-20472	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_MH382833	Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence	1171-1200	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014896	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-6, complete sequence	10867-10896	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP020834	Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence	25321-25350	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP013153	Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence	9470-9499	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP022021	Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence	83288-83317	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP030090	Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence	20450-20479	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_022123	Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2, complete sequence	24433-24462	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_021234	Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4, complete sequence	34948-34977	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP021461	Lactobacillus brevis strain ZLB004 plasmid p5, complete sequence	42175-42204	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP042386	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed3, complete sequence	18409-18438	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014930	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-6, complete sequence	19799-19828	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP029547	Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence	66641-66670	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014875	Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence	13747-13776	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014627	Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence	16482-16511	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP018765	Pediococcus acidilactici strain BCC1 plasmid pbcp2, complete sequence	8418-8447	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP019983	Pediococcus inopinatus strain DSM 20285 plasmid pLDW-13, complete sequence	22371-22400	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_016821	Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence	4958-4987	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP035748	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed2, complete sequence	13271-13300	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP035750	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed4, complete sequence	17105-17134	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP047122	Lactobacillus hilgardii strain FLUB plasmid unnamed1	7704-7733	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP014603	Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence	23640-23669	0	1.0
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP028237	Lactobacillus plantarum strain SRCM101511 plasmid unnamed2, complete sequence	37170-37199	0	1.0
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	932-961	0	1.0
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	954-983	0	1.0
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3398-3427	0	1.0
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3420-3449	0	1.0
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3442-3471	0	1.0
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP031184	Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence	3464-3493	0	1.0
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	7129-7158	1	0.967
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	13703-13732	1	0.967
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	63972-64001	1	0.967
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	910-939	1	0.967
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	7129-7158	1	0.967
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	13703-13732	1	0.967
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	63972-64001	1	0.967
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	910-939	1	0.967
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	47353-47382	2	0.933
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	27627-27656	2	0.933
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	47353-47382	2	0.933
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	27627-27656	2	0.933
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	976-1005	4	0.867
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NC_014619	Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence	976-1005	4	0.867
NZ_CP045729_2	2.1\|1660766\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660766-1660795	30	AP014501	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, * SEQUENCING IN PROGRESS *, 3 ordered pieces	10902-10931	6	0.8
NZ_CP045729_2	2.8\|1660767\|30\|NZ_CP045729\|PILER-CR	1660767-1660796	30	AP014501	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, * SEQUENCING IN PROGRESS *, 3 ordered pieces	10902-10931	6	0.8
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	AP017627	Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome	120944-120973	7	0.767
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1934079-1934108	7	0.767
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	AP017627	Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome	120944-120973	7	0.767
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1934079-1934108	7	0.767
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	302611-302640	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	338415-338444	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	338415-338444	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	336856-336885	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	341103-341132	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	335221-335250	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	187270-187299	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	338415-338444	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	187264-187293	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP038257	Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence	120969-120998	8	0.733
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP017576	Bacillus thuringiensis strain SCG04-02 plasmid PSCG5, complete sequence	3389-3418	8	0.733
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP019233	Bacillus thuringiensis strain YGd22-03 plasmid pYGD5, complete sequence	2986-3015	8	0.733
NZ_CP045729_2	2.4\|1660964\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660964-1660993	30	NZ_CP009646	Bacillus pseudomycoides strain BTZ plasmid pBTZ_6, complete sequence	559-588	8	0.733
NZ_CP045729_2	2.6\|1661096\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1661096-1661125	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	69995-70024	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	302611-302640	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	338415-338444	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	338415-338444	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	336856-336885	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	341103-341132	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	335221-335250	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	187270-187299	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	338415-338444	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	187264-187293	8	0.733
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP038257	Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence	120969-120998	8	0.733
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP017576	Bacillus thuringiensis strain SCG04-02 plasmid PSCG5, complete sequence	3389-3418	8	0.733
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP019233	Bacillus thuringiensis strain YGd22-03 plasmid pYGD5, complete sequence	2986-3015	8	0.733
NZ_CP045729_2	2.11\|1660965\|30\|NZ_CP045729\|PILER-CR	1660965-1660994	30	NZ_CP009646	Bacillus pseudomycoides strain BTZ plasmid pBTZ_6, complete sequence	559-588	8	0.733
NZ_CP045729_2	2.13\|1661097\|30\|NZ_CP045729\|PILER-CR	1661097-1661126	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	69995-70024	8	0.733
NZ_CP045729_2	2.2\|1660832\|30\|NZ_CP045729\|CRISPRCasFinder,CRT	1660832-1660861	30	NZ_CP027670	Simplicispira suum strain SC1-8 plasmid unnamed1, complete sequence	99391-99420	9	0.7
NZ_CP045729_2	2.9\|1660833\|30\|NZ_CP045729\|PILER-CR	1660833-1660862	30	NZ_CP027670	Simplicispira suum strain SC1-8 plasmid unnamed1, complete sequence	99391-99420	9	0.7

1. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

2. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

3. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

4. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP041212 (Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

5. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP042373 (Lactobacillus malefermentans strain CBA3618 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

6. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP053341 (Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

7. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_022045 (Listeria monocytogenes strain N1-011A plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

8. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_017018 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

9. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP012281 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

10. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP042385 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

11. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014921 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

12. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP035024 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

13. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP035024 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

14. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP016492 (Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

15. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_018699 (Leuconostoc carnosum JB16 plasmid pKLC4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

16. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_AP018407 (Lactobacillus plantarum strain SN35N plasmid pSN35N-2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

17. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_AP018409 (Lactobacillus plantarum strain SN35N plasmid pSN35N-4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

18. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_008502 (Lactobacillus paracasei ATCC 334 plasmid 1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

19. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP020733 (Leuconostoc mesenteroides subsp. mesenteroides FM06 plasmid pLm2, complete genome) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

20. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP017698 (Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 plasmid pLDW-4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

21. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_015701 (Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

22. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_021503 (Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

23. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014901 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

24. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_MH382833 (Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

25. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014896 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

26. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP020834 (Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

27. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013153 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

28. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP022021 (Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

29. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP030090 (Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

30. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_022123 (Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

31. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_021234 (Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

32. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP021461 (Lactobacillus brevis strain ZLB004 plasmid p5, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

33. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP042386 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

34. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014930 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

35. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP029547 (Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

36. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014875 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

37. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014627 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

38. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP018765 (Pediococcus acidilactici strain BCC1 plasmid pbcp2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

39. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP019983 (Pediococcus inopinatus strain DSM 20285 plasmid pLDW-13, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

40. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_016821 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

41. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP035748 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

42. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP035750 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

43. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP047122 (Lactobacillus hilgardii strain FLUB plasmid unnamed1) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

44. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP014603 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

45. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP028237 (Lactobacillus plantarum strain SRCM101511 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

46. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

47. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

48. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

49. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

50. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

51. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

52. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

53. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

54. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

55. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP041212 (Listeria monocytogenes strain LMP18-H2446 plasmid pCFSAN074383, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

56. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP042373 (Lactobacillus malefermentans strain CBA3618 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

57. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP053341 (Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

58. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_022045 (Listeria monocytogenes strain N1-011A plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

59. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_017018 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

60. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP012281 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

61. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP042385 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

62. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014921 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

63. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP035024 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

64. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP035024 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

65. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP016492 (Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

66. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_018699 (Leuconostoc carnosum JB16 plasmid pKLC4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

67. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_AP018407 (Lactobacillus plantarum strain SN35N plasmid pSN35N-2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

68. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_AP018409 (Lactobacillus plantarum strain SN35N plasmid pSN35N-4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

69. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_008502 (Lactobacillus paracasei ATCC 334 plasmid 1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

70. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP020733 (Leuconostoc mesenteroides subsp. mesenteroides FM06 plasmid pLm2, complete genome) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

71. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP017698 (Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 plasmid pLDW-4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

72. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_015701 (Lactobacillus reuteri SD2112 plasmid pLR584, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

73. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_021503 (Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

74. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014901 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

75. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_MH382833 (Listeria welshimeri strain 40/07 plasmid pLIS1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

76. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014896 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

77. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP020834 (Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

78. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP013153 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

79. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP022021 (Listeria monocytogenes strain FDA709873-33 plasmid pCFSAN021445, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

80. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP030090 (Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

81. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_022123 (Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

82. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_021234 (Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

83. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP021461 (Lactobacillus brevis strain ZLB004 plasmid p5, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

84. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP042386 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

85. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014930 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-6, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

86. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP029547 (Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

87. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014875 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

88. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014627 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

89. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP018765 (Pediococcus acidilactici strain BCC1 plasmid pbcp2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

90. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP019983 (Pediococcus inopinatus strain DSM 20285 plasmid pLDW-13, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

91. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_016821 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

92. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP035748 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

93. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP035750 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

94. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP047122 (Lactobacillus hilgardii strain FLUB plasmid unnamed1) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

95. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP014603 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

96. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP028237 (Lactobacillus plantarum strain SRCM101511 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacgtttga	Protospacer
******************************

97. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

98. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

99. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

100. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

101. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

102. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP031184 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_B, complete sequence) position: , mismatch: 0, identity: 1.0

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatagaacaca	Protospacer
******************************

103. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
gacagaacaccacagtcttaacacgtttga	Protospacer
.*****************************

104. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccgcagtcttaacacgtttga	Protospacer
***********.******************

105. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_017472 (Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence) position: , mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacttttga	Protospacer
************************ *****

106. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 1, identity: 0.967

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgcttatagaacaca	Protospacer
*****************.************

107. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
gacagaacaccacagtcttaacacgtttga	Protospacer
.*****************************

108. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccgcagtcttaacacgtttga	Protospacer
***********.******************

109. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NC_017472 (Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence) position: , mismatch: 1, identity: 0.967

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
aacagaacaccacagtcttaacacttttga	Protospacer
************************ *****

110. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 1, identity: 0.967

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgcttatagaacaca	Protospacer
*****************.************

111. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 2, identity: 0.933

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
gacagagcaccacagtcttaacacgtttga	Protospacer
.*****.***********************

112. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 2, identity: 0.933

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
gacagagcaccacagtcttaacacgtttga	Protospacer
.*****.***********************

113. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 2, identity: 0.933

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
gacagagcaccacagtcttaacacgtttga	Protospacer
.*****.***********************

114. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 2, identity: 0.933

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
gacagagcaccacagtcttaacacgtttga	Protospacer
.*****.***********************

115. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 4, identity: 0.867

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatggatcgct	Protospacer
**********************.** *.*

116. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NC_014619 (Lactobacillus casei strain TISTR1341 plasmid pRCEID3.2, complete sequence) position: , mismatch: 4, identity: 0.867

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
agaacacaaattgtctgtttatggatcgct	Protospacer
**********************.** *.*

117. spacer 2.1|1660766|30|NZ_CP045729|CRISPRCasFinder,CRT matches to AP014501 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 6, identity: 0.8

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
atggtaacaccacagtcttaacatgtttta	Protospacer
*  . ******************.**** *

118. spacer 2.8|1660767|30|NZ_CP045729|PILER-CR matches to AP014501 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 6, identity: 0.8

aacagaacaccacagtcttaacacgtttga	CRISPR spacer
atggtaacaccacagtcttaacatgtttta	Protospacer
*  . ******************.**** *

119. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to AP017627 (Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome) position: , mismatch: 7, identity: 0.767

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
tccggcggccgtcctcggggtgccagcggg	Protospacer
   **  ********** * **********

120. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 7, identity: 0.767

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgaggatgctgtcgtcgtgctgcccaaggc	Protospacer
 ********.*** ********** . **

121. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to AP017627 (Pleomorphomonas sp. SM30 plasmid pSM30-1 DNA, complete genome) position: , mismatch: 7, identity: 0.767

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
tccggcggccgtcctcggggtgccagcggg	Protospacer
   **  ********** * **********

122. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 7, identity: 0.767

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgaggatgctgtcgtcgtgctgcccaaggc	Protospacer
 ********.*** ********** . **

123. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
gcgtggcgacgtgctcgtgctgccagcggg	Protospacer
. . *..* *** *****************

124. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

125. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

126. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

127. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

128. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

129. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

130. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

131. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

132. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP038257 (Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
agcccgacccgtcctcatgctgccagcggc	Protospacer
**   .  ********.************

133. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP017576 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG5, complete sequence) position: , mismatch: 8, identity: 0.733

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
ctaaaacaaattatctgtttatagattatc	Protospacer
  ** *******.************ .*.

134. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP019233 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD5, complete sequence) position: , mismatch: 8, identity: 0.733

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
ctaaaacaaattatctgtttatagattatc	Protospacer
  ** *******.************ .*.

135. spacer 2.4|1660964|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP009646 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_6, complete sequence) position: , mismatch: 8, identity: 0.733

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
ctaaaacaaattatctgtttatagattatc	Protospacer
  ** *******.************ .*.

136. spacer 2.6|1661096|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 8, identity: 0.733

aataaaaataataaggtctatcaagcagtg	CRISPR spacer
cataaaaataattaagtctatcaataacac	Protospacer
 *********** *.*********  *

137. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
gcgtggcgacgtgctcgtgctgccagcggg	Protospacer
. . *..* *** *****************

138. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

139. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

140. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

141. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

142. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

143. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

144. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

145. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cgttgccaccgtcctcgtgctgccatcggc	Protospacer
 *  * ..***************** ***

146. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP038257 (Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
agcccgacccgtcctcatgctgccagcggc	Protospacer
**   .  ********.************

147. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP017576 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG5, complete sequence) position: , mismatch: 8, identity: 0.733

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
ctaaaacaaattatctgtttatagattatc	Protospacer
  ** *******.************ .*.

148. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP019233 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD5, complete sequence) position: , mismatch: 8, identity: 0.733

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
ctaaaacaaattatctgtttatagattatc	Protospacer
  ** *******.************ .*.

149. spacer 2.11|1660965|30|NZ_CP045729|PILER-CR matches to NZ_CP009646 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_6, complete sequence) position: , mismatch: 8, identity: 0.733

agaacacaaattgtctgtttatagaacaca	CRISPR spacer
ctaaaacaaattatctgtttatagattatc	Protospacer
  ** *******.************ .*.

150. spacer 2.13|1661097|30|NZ_CP045729|PILER-CR matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 8, identity: 0.733

aataaaaataataaggtctatcaagcagtg	CRISPR spacer
cataaaaataattaagtctatcaataacac	Protospacer
 *********** *.*********  *

151. spacer 2.2|1660832|30|NZ_CP045729|CRISPRCasFinder,CRT matches to NZ_CP027670 (Simplicispira suum strain SC1-8 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cttggttgccgtcctcgtgctgcctgacct	Protospacer
   ** ****************** *

152. spacer 2.9|1660833|30|NZ_CP045729|PILER-CR matches to NZ_CP027670 (Simplicispira suum strain SC1-8 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agaggatgccgtcctcgtgctgccagcggg	CRISPR spacer
cttggttgccgtcctcgtgctgcctgacct	Protospacer
   ** ****************** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

97913 : 106370

Staphylococcus_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056937373.1\|97913_98822_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	2.6e-05	43.5
WP_056937374.1\|98931_100383_+	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	2.5e-34	29.2
WP_056937375.1\|100683_101748_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2I2L4R9	Orpheovirus	4.7e-38	32.7
WP_056937376.1\|101732_102341_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.7e-32	38.2
WP_056937377.1\|102330_103506_+	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-103	50.8
WP_056937378.1\|103517_103982_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.2e-32	46.7
WP_123383578.1\|104177_105617_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_056937380.1\|105626_106370_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-32	42.7

DBSCAN-SWA_2

282586 : 295976

Enterococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153672797.1\|282586_284986_+	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	4.9e-11	39.8
WP_056936545.1\|285001_286687_+	alpha-glycosidase	NA	NA	NA	NA
WP_007121919.1\|286721_287723_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	4.0e-116	64.0
WP_056936546.1\|287767_289939_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.1e-247	59.1
WP_007121917.1\|290124_290346_-	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	3.6e-09	41.3
WP_050950798.1\|290637_291102_+	nucleoside deaminase	A0A2H4PQS8	Staphylococcus_phage	3.2e-07	31.8
WP_056936547.1\|291335_293012_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.3e-58	39.7
WP_007121914.1\|293034_293343_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_056936548.1\|293355_293955_+	recombination protein RecR	NA	NA	NA	NA
WP_056936549.1\|293967_294621_+	dTMP kinase	M1PSC7	Streptococcus_phage	4.1e-45	46.9
WP_007121911.1\|294623_294944_+	YaaQ protein	NA	NA	NA	NA
WP_056936550.1\|294956_295976_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	9.0e-31	36.3

DBSCAN-SWA_3

941413 : 949346

Staphylococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056937125.1\|941413_942256_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.2e-17	35.7
WP_056937126.1\|942388_943036_+	hemolysin III family protein	NA	NA	NA	NA
WP_056937127.1\|943032_943527_-	dihydrofolate reductase	V9LZM6	Vibrio_phage	4.8e-22	37.9
WP_056937128.1\|943536_944496_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	3.2e-115	61.8
WP_056937129.1\|944508_946401_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.2e-56	30.9
WP_056937130.1\|946405_947611_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	9.9e-45	50.0
WP_056937131.1\|947709_948978_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_007121623.1\|949070_949346_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	8.9e-26	70.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045730

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045729

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection