CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045851	Iamiaceae bacterium SCSIO 58843 chromosome, complete genome	7 crisprs	csa3,WYL,cas3,DEDDh,DinG,cas4	0	2	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045851_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_1

93825-93946

Orphan

Consensus_repeat	Method
GATCGCGACCGTCAGTGTCGCGATGCGTACCGAGAACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045851_1

>merge|NZ_CP045851|1|93825-93946|CRISPRCasFinder
GATCGCGACCGTCAGTGTCGCGATGCGTACCGAGAACGGTCGGCGGGAGGGGTGCCCGGCGTGGAGGGGCGGTTCTGGGTACGGATCGCGACCGTCAGTGTCGCGATACGTACCGAGAACGG

>NZ_CP045851|1|1|93825-93946|CRISPRCasFinder
GATCGCGACCGTCAGTGTCGCGATGCGTACCGAGAACGG	TCGGCGGGAGGGGTGCCCGGCGTGGAGGGGCGGTTCTGGGTACG
GATCGCGACCGTCAGTGTCGCGATACGTACCGAGAACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153757798.1\|92970_93366_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319939
NZ_CP045851.1\|WP_153757802.1\|95373_96612_-\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|235675
NZ_CP045851.1\|WP_153757803.1\|98090_99128_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274647
NZ_CP045851.1\|WP_153761010.1\|102087_103035_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270703
NZ_CP045851.1\|WP_153757796.1\|90669_91569_+\|TIGR03620-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274681
NZ_CP045851.1\|WP_153757794.1\|88616_89765_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173849
NZ_CP045851.1\|WP_153757799.1\|93397_93730_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370480
NZ_CP045851.1\|WP_153757801.1\|94513_95347_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180472
NZ_CP045851.1\|WP_153757800.1\|94037_94517_-\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|176867
NZ_CP045851.1\|WP_153757806.1\|100924_101725_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|235852
NZ_CP045851.1\|WP_153757791.1\|85458_86256_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371178
NZ_CP045851.1\|WP_153757807.1\|101734_102091_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153757805.1\|100158_100881_+\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|376667
NZ_CP045851.1\|WP_153761008.1\|91643_92105_+\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP045851.1\|WP_153757793.1\|87170_88610_+\|FCD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225097
NZ_CP045851.1\|WP_153757795.1\|89813_90638_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239527
NZ_CP045851.1\|WP_153761009.1\|96739_98029_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349924
NZ_CP045851.1\|WP_153757792.1\|86299_87094_+\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790
NZ_CP045851.1\|WP_153757797.1\|92114_92954_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153757804.1\|99162_100071_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236099

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153757798.1\|92970_93366_+\|VOC-family-protein	gnl\|CDD\|319939	cd08351, ChaP_like, ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha), and similar proteins. ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.	1.70701e-52
NZ_CP045851.1\|WP_153757802.1\|95373_96612_-\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|235675	PRK06025, PRK06025, acetyl-CoA C-acetyltransferase.	0
NZ_CP045851.1\|WP_153757803.1\|98090_99128_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274647	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family. Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity].	6.08848e-176
NZ_CP045851.1\|WP_153757796.1\|90669_91569_+\|TIGR03620-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|274681	TIGR03620, F420_MSMEG_4141, probable F420-dependent oxidoreductase, MSMEG_4141 family. Members of this protein family, related to F420-dependent oxidoreductases within the larger family of a bacterial luciferase (an FMN-dependent enzyme), occurs only within the small subset of species that synthesize F420. Most such proteins are from members of the Actinobacteria, but at least one species, Sphingomonas wittichii, belongs to the Alphaproteobacteria. [Unknown function, Enzymes of unknown specificity].	6.08989e-110
NZ_CP045851.1\|WP_153757794.1\|88616_89765_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	1.10685e-155
NZ_CP045851.1\|WP_153757799.1\|93397_93730_-\|hypothetical-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	5.72917e-10
NZ_CP045851.1\|WP_153761008.1\|91643_92105_+\|DoxX-family-membrane-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	4.41028e-11
NZ_CP045851.1\|WP_153757800.1\|94037_94517_-\|polyketide-cyclase	gnl\|CDD\|176867	cd07825, SRPBCC_7, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	3.6582e-40
NZ_CP045851.1\|WP_153757806.1\|100924_101725_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|235852	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.	2.9656e-72
NZ_CP045851.1\|WP_153757791.1\|85458_86256_+\|hypothetical-protein	gnl\|CDD\|371178	pfam10648, Gmad2, Immunoglobulin-like domain of bacterial spore germination. This domain is found linked to the GerMN domain pfam10646 in some bacterial proteins. It is predicted to contain an immunoglobulin-like all-beta fold.	2.02414e-09
NZ_CP045851.1\|WP_153757805.1\|100158_100881_+\|TSUP-family-transporter	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.15286e-10
NZ_CP045851.1\|WP_153757801.1\|94513_95347_-\|enoyl-CoA-hydratase	gnl\|CDD\|180472	PRK06210, PRK06210, enoyl-CoA hydratase; Provisional.	4.58387e-102
NZ_CP045851.1\|WP_153757793.1\|87170_88610_+\|FCD-domain-containing-protein	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.58839e-33
NZ_CP045851.1\|WP_153757795.1\|89813_90638_+\|hypothetical-protein	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	2.00352e-12
NZ_CP045851.1\|WP_153761009.1\|96739_98029_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349924	cd05675, M20_yscS_like, M20 Peptidase, carboxypeptidase yscS-like. Peptidase M20 family, yscS (GlyX-carboxypeptidase, CPS1, carboxypeptidase S, carboxypeptidase a, carboxypeptidase yscS, glycine carboxypeptidase)-like subfamily. This group contains proteins that have been uncharacterized to date with similarity to vacuolar proteins involved in nitrogen metabolism which are essential for use of certain peptides that are sole nitrogen sources. YscS releases a C-terminal amino acid from a peptide that has glycine as the penultimate residue. It is synthesized as one polypeptide chain precursor which yields two active precursor molecules after carbohydrate modification in the secretory pathway. The proteolytically unprocessed forms are associated with the membrane, whereas the mature forms of the enzyme are soluble. Enzymes in this subfamily may also cleave intracellularly generated peptides in order to recycle amino acids for protein synthesis.	7.56791e-121
NZ_CP045851.1\|WP_153757792.1\|86299_87094_+\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	4.10521e-76
NZ_CP045851.1\|WP_153761010.1\|102087_103035_-\|phosphotransferase	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	5.88629e-66
NZ_CP045851.1\|WP_153757804.1\|99162_100071_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|236099	PRK07791, PRK07791, short chain dehydrogenase; Provisional.	3.57922e-131

>NZ_CP045851.1|WP_153757799.1|93397_93730_-|hypothetical-protein
MTEPIRDRLQAEVLPAMKARDALRLSTLRTTLAAIANAEAVDAAHSRAAVGLHANDVARRDLDEDDVRAVVASIRDELLDAVDEMVAIGRHDLADDRRRQAAILDAHLAC
>NZ_CP045851.1|WP_153757798.1|92970_93366_+|VOC-family-protein
MAIELNHTIVGAVDAEASARWLAEMLGLDQPVHVGHFWQVRMANGVDLDFASMGDEPVVPQHYAFLISEDEFDEVHGRLLLGDHDIWADPGQRYPGDINHNDGGRGVYFLSNDGHFLEVITRPYGSGSPSA
>NZ_CP045851.1|WP_153757797.1|92114_92954_+|hypothetical-protein
MVGRSGVDERWDGDVDAVGQPRAPRWSLPTLVAFASLTSLVAGVGLVSLGWSDPRLAAPVLSVVGLGWLTIGWRRRWPPRLRRALSCAMAVGIFVGLVLHMFQPPSEAELVARLDDLPTVESAGGGIARAWVVGESELPWIAPVVRRSGSLADGDEPGAVANALRRRGYEAEVLGPVSSSPSDRLGLWHVRAVDDRTTLLVQLDAEGALVQASWAAPGIDTWPLGSPAAPGFGGWIVMPAIARSVLYVLALVGAALVGTSVVLLARNWRCFITRPDEPS
>NZ_CP045851.1|WP_153761008.1|91643_92105_+|DoxX-family-membrane-protein
MLAHGVNHIVGGGKIAGTAGWFESLGMRPGRLHAWLASLTEVGAGVLLLLGLATSLAAGGALGVMVVAWVTNHRGNGFFIFRPGEGWEYVMTLSVVSAAIGPLGGGGWSLDHALDLDDTFSGVSGLVLALGPGLLGAAALLAAFWRPPRPTSA
>NZ_CP045851.1|WP_153757796.1|90669_91569_+|TIGR03620-family-F420-dependent-LLM-class-oxidoreductase
MSATTMDLGRVGIWTGAMDAMPSSDAAGFARLIEELGFRTLWIPETVGRDPMVNATLLLERTSTLQIATGIANVYARDAVTMANTQRAIEEAFPGRFLLGLGVSHAHLVDRVRKHDYSKPYSYMVDYLTDMDGSIFRAVGPEQLPQARVLAALGPKMLELAATKANGAHPYFVPVEHTARAREIMGPDATLAPEQMVVLDTDPTTARETARKNMSVYLRAPNYVNNLKRFGFTDEDVVADAPSDRLVDAIVAWGDVDAIVDRVRAHHDAGADHVAVQVLAAGTFVPPEDQLRELAAALL
>NZ_CP045851.1|WP_153757795.1|89813_90638_+|hypothetical-protein
MTTDAQDLGQTMSRHVLTRLGLQVVTGDHLRFDLLLDDAHLDADGHIDVGVLGTYIDMTSSQPREMQAGRPFVHADISFHRLARPEGARLSADARALRLGKRTGVIEIEVHDDAGVHVARSVQGIAFPSGAPTLRRSHADEVEDRFFTQFHGECTLDGPFRDVVGISGPHGDGPDAWWEIALSDVNVNGFGGLHGGVATALVDAAATGAVRVAGHEPAGALSLAVRYLAPSLAGPIRARGRVTGRVGDVAVVAVEVRDADENLTILSDVHVATR
>NZ_CP045851.1|WP_153757794.1|88616_89765_-|acyl-CoA-dehydrogenase
MERTIFEPEHEMFRESVREFLRREAVPHVERWEREGVVDRELFTAAGAAGFLGMDLPADLGGGGVRDFRYNAVIGEEVQMAGLGGAGLGLTLHNDICIPYLRDLTTAEQAERWIPGVASGELVTAIAMTEPGIGSDLASMTTTAIDDGDSYVVNGSKTFITNGINADLVITAVKTDPTERHRGMSLLVLERGMEGFTRGRNLEKIGLHSQDTAELSFVDVRVPKENLLGVEGGGFGHLVTNLAQERLSIAVAGVAAARAALDWTVAYVRERSAFGQSIGSFQNTRFELATLATEVEVGQSFIDRCITALDAGTLTAEDAAMAKWWCTELQGRAVDVGVQLHGGYGFMAEYPIGRAYADARVTRIYGGTTEIMKEIIGRSLQL
>NZ_CP045851.1|WP_153757793.1|87170_88610_+|FCD-domain-containing-protein
MTTSSASDPAPNLFGASRPEGAKLASIVAGRMVADIAAAGWPEGQVIGSEAELLERYGVSRAVFREAVRLLEHQRIGRMRRGPGGGLVVTEPSVDTVIDAVAVYLLHIQADLAEVFEARHALEQAAAELAAERLTEDDLAEMRDLADREAQGEQTSHRELHNLVAAATQNPALEFFVDLLNRVTLLYSPEASALTRAVRAESAVAHQKIVDSIVHADMHRAGRRMRTHLEAEAEFIQRRLPARPRLDEVFAAPAPGTAKLAESVARQIVGEVTDGGWVVGRPLGSEQELMERYDISRAVLREAVRVLEHHDIARMRRGPGGGLFVTEPGVDATAEAMALYLNRRNVGSAHLFEVRGIVEMTVLDRVVDGLTDEVVATLERVLDAEEAASPEEFPLVGHDLHQVLADMSGNRVLALLTNVLVRLSRTYAATMGEATGNPLPTDEITKAHRRIVEPIVARDLGLARRRMRRHLDALTGWER
>NZ_CP045851.1|WP_153757792.1|86299_87094_+|siderophore-interacting-protein
MTDLSTYRTFLTHVAAVGEVGPGLVQVTFQGGDLEGFEPVGPDTFLYLLLPPPGRRDLTIDRSFTWTAYQEMPEELRPVGAYYTLRHWRPEAAELDIWMVLHDDPGPASGWATRAAPGDPVALWGPRTAYDPPPDTDWFLLVADETGLPAAAVICETLPPDVPIRVVAEVADAAHHQPLPERPGLDVRWMHRDGRPAGRTTALLDAVAAADWPEGNPYVWGGAESRAVSAVRRFVRGTRDLPRERVSLVGYWRHADHPPEPDED
>NZ_CP045851.1|WP_153757791.1|85458_86256_+|hypothetical-protein
MASVHEDGRRANKVWLGLFGAVVLVAIVVVLVLLFGGDDGDDDAASTTTSEVVETTTTTEATTTTEATTTTSAATPAGVTDQEAASIVWPDPEGSITYDDPIDAAAGYAEELVGFTDPLYGELMEGDSRSGEVEVRAVEDGPATIVLVRQMSDEAWYVLGSVTESIELDDPVAGTAIDDPLQLSGRARAFEGTVQVAVFERGATEPLGEGFVTGSGSEELGPFEGEVSWENPGGGWGAVVLYTLGGEDGVVWEAVSVPVGFIGGD
>NZ_CP045851.1|WP_153757800.1|94037_94517_-|polyketide-cyclase
MSAAERIAATRRVAAPAGRIFAVVSHPQGHVDIDGSGMLEAAPDATPLTEVGQAFTMHMDREPLGDLPMGKYTVLNRVTRIEPDRLVEWSVGSTDHPKPLGHVYGWELVALDDGTTEVTNYCDWSGLNPKLRDRITFPIVPLEMLERSVERLAVLLADD
>NZ_CP045851.1|WP_153757801.1|94513_95347_-|enoyl-CoA-hydratase
MYEQIRYEVDGPMGLITLHRPEALNAWTDVMAREVRDAVGRAAADRDVVAIVITGAGRGFCAGADLGRLEDMAGGERSSPLAETLARGDAPQEIGDFDGTFSYLMATEKPVIAAINGAVAGMAYPFVLCCDLRFMSDDAVMLTAFAQRGLVAEFGLSWLLPRQVGPAVALDLLLSSRTIDGREAAQLGLVNASMPGDELLDHCRAYVQRLADTCSPASMAVMKRQVYEQLHRGLGAAEGDAFVHMAESFRRPDFTEGVMSFLEKRPPSFTRLPAEGS
>NZ_CP045851.1|WP_153757802.1|95373_96612_-|acetyl-CoA-C-acyltransferase
MTEAWIIDACRTPRGVGKVGKGALADVHPQVLGAATLRALAERNDLDTSIVDDVIWGCSLQVGTQGGALGRMTALDAGWDTTTSGFTLDRYCGSGITAVNLAAGMVASGLEGVVVAGGAEMMSSYAENSSKVRHPFMDKGNPHLRELHPQSNQGVAADAIATLEGISRQALDELGAESQRRAAVAIEEGRFERSLVPVHHPDGTLALDREEYPRPGTTAEKLSQLAPSFEAVADIPLDEDGRTFRSEILRRYPDLEIEHVHHAGNSSGVVDGAGALLLANSEVATANGWTPRARVVAMANVGDDPTLMLNAPVPATRKVLEKAGMTLDDIDLFEVNEAFAVVVEKYIRDLGIDREKINVNGGAIALGHPIGATGSMLVGTLLDELERQDLERGLITMCAAGGMAPAIIIERI
>NZ_CP045851.1|WP_153761009.1|96739_98029_+|M20/M25/M40-family-metallo-hydrolase
MIRNACVNEGTVESGQEIRNAEVLASFLDGSGADVELFHAAPGRTTLVARVEGSDPSAPSLCLNGHTDVVPVSPDGWSRDPFAAELVDGEIWGRGAVDMLNLTASMAVAVRHLLASGLRPRGDLVLLAVADEESGSRWGARWMAEHHADLITTDFVLTENGGLHGGSDTSPTVSVTVGEKGVAWRRLTVRGTPGHGSMPFRADNALVTAAGVVSRLAEYRPPPMFHELWRRQVAALPVDDETRETLLDPDRIDDLLATMPGPAGHFYSCTHTTFSPNTVTSQSKTNVIPDTVTIDVDVRTLPGEGPEEVEAHLRAALGDDLFARVEVEPLIDDRASTSRTDTPLWDALQRGVARSFDRATLHPQLSVGFTDARVHRELGAIAYGAGLLSPNLSSREFGRRFHGNDERIDVESLGLTTRLWIDVVRDLLG
>NZ_CP045851.1|WP_153757803.1|98090_99128_+|LLM-class-F420-dependent-oxidoreductase
MKLSMSMSYAGGFLAAVEQVQAYEKAGVDMVWVAEAYGNDAPTLMGYIAAKTERIEIASGILPIYTRTPTLLAMTAAGLDEISGGRAVLGLGASGPQVIEGFHGIPYDRPLQRTREIIDICRMVWRRERLEYDGKAYHLPLPEGQGTGLGKALKIITHPQRADIPIYVASLGPKNVQMTAELADGWLPIFYNPHKANDVWGDDLAAGFAKRSSDLGPLQIVAGGAIGFGDEETAKKVRDANRPMVALYVGGMGARDKNFYNDLFCRYGYEAEAKEIQDLYLSGKKDEAAAAIPDDFLRASSLFGDEGFVREQVQAYKDAGVTALSVAPIGDDPIGVLEKVKAWAD
>NZ_CP045851.1|WP_153757804.1|99162_100071_-|SDR-family-NAD(P)-dependent-oxidoreductase
MGALDGRVAIITGAGRGVGREHALLFAHEGAKVVVNDLGGAEDGSGSDATPADEVVAEIRAAGGTAIANHDDVADWEGGQRLINAAIEEFGDLHVLVNNAGILRDRMLVNMTEQEWDAVIHVHLKGHFVPTRWAAAYWREKAKAGEEVKASIINTSSTSGLFGNAGQTNYGAAKSGIASFTTILQDEIGRYGVRCNAIAPAARTRLTMTIPGAADRMGPTDEGWDPSDPANIAPFVAYLATEECRIAGKVFFVRGGEVHMFKPWSIVDAVTKDGYWEVEELAAAADKWADVEFDLGRPFRKG
>NZ_CP045851.1|WP_153757805.1|100158_100881_+|TSUP-family-transporter
MDLSIVAWAAVLAAVLLGATIQGAIGFGMNLVSVPVIALVAPDTLPIAAILLGVPISVVMARYERASVDRSGVLWLFVGRVPGSAAGAAVVVAASTRDLQLFVGAVVLLMVLASITAPPIPVRRETQVGAGFVSGITGTAAGIGGPPVALLYQRHSGPVMRATLAATFFLGTILSVTTLAVSGSIPRDGVLLGAASIPFVVLGSRSGRRFHALLERRWLRPAVLAFSAVSAGVVVVDALW
>NZ_CP045851.1|WP_153757806.1|100924_101725_+|enoyl-CoA-hydratase/isomerase-family-protein
MTDEVLVDTSDHIATITLNRPDRLNAISGPMLRELSRILVECDARRDVRAIVLTGAGRGFCAGLDLQAVSAGGLGGGSDDAGSGGGAPPTRLDDSPPFVLRRLDTPVLCGLNGPAAGYGMDMALGCDLIVASEHASMSPPIQRGVVPESGGTWLLPRLIGWQRACEVAMLGDKLRADDLARLGLVNAVVPADDFDDTVREWARRLARQAPLAMQATKRSMRLGLDASFDANAHHVMAEFRVLSRTKDFAEGVAAFVEKRDPRYEGR
>NZ_CP045851.1|WP_153757807.1|101734_102091_-|hypothetical-protein
MTQPRPTAVELLDAVRSFLEEDVMASVEGRVQFHARVAVNVLSTVIRELEQGDIAEAAERAGLVDLLGHDGPLDELVEELAGAIRDGSIDVADPALLAHLRATARADVEIANPRHAAD
>NZ_CP045851.1|WP_153761010.1|102087_103035_-|phosphotransferase
MAAAAERHLGAGTSVEGLRRLSGGASRELWSFRATSPDGSAHDLVLRRDPPGSTTPVDESRLLAAAAAAGVPVPAVRFVLDPDDHLGRGFVMDAVEGEALGRRIVRDDAYAGARQVLPAQCGEALARVHSIGLADSGLAARVGDDHPALRQLDDLHRVVDDLGAVRPVLEVAFRWLRTDPPPCDRQVVVHGDFRVGNLIVGPEGLRAVLDWELAHVGDPAEDVGWMCVRSWRFGGAGRAGGVGGLDDLLAGYRAAGGQIDVDAVHYWEVFGNLRWAVICLMQVGVHLSGVRRSVEQAAIGRRVAEVEHDLMELLA

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Crispr_ID: NZ_CP045851_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_2

1079810-1079911

Orphan

Consensus_repeat	Method
TCCGCGAGCTCGACCTCTTCGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045851_2

>merge|NZ_CP045851|2|1079810-1079911|CRISPRCasFinder
TCCGCGAGCTCGACCTCTTCGTCGACCGCCGCGTGCTCATCCCGCGCCCGGAGACCGAGGAGGTCGTGGAGCAGGCCCTCCGCGAGCTCGACCTCGTCGTCG

>NZ_CP045851|2|2|1079810-1079911|CRISPRCasFinder
TCCGCGAGCTCGACCTCTTCGTCG	ACCGCCGCGTGCTCATCCCGCGCCCGGAGACCGAGGAGGTCGTGGAGCAGGCCC
TCCGCGAGCTCGACCTCGTCGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153758697.1\|1080916_1082413_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236204
NZ_CP045851.1\|WP_153758701.1\|1085447_1085810_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP045851.1\|WP_153758694.1\|1078493_1079558_+\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP045851.1\|WP_153758692.1\|1077202_1077436_+\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234576
NZ_CP045851.1\|WP_153758696.1\|1080460_1080913_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NZ_CP045851.1\|WP_153758698.1\|1082411_1082939_+\|ribose-5-phosphate-isomerase-B	unknown	unknown	gnl\|CDD\|376799
NZ_CP045851.1\|WP_153758700.1\|1084202_1085375_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_CP045851.1\|WP_153761086.1\|1070983_1072357_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP045851.1\|WP_153758688.1\|1069673_1070978_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP045851.1\|WP_153758693.1\|1077741_1078452_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758690.1\|1072889_1074011_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758705.1\|1087392_1088091_+\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP045851.1\|WP_153758699.1\|1082938_1084186_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|234571
NZ_CP045851.1\|WP_153758691.1\|1074074_1075175_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|367273
NZ_CP045851.1\|WP_153758702.1\|1085806_1086262_+\|ATP-synthase-subunit-I	unknown	unknown	unknown
NZ_CP045851.1\|WP_153761087.1\|1075467_1077120_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP045851.1\|WP_153761085.1\|1068399_1069659_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP045851.1\|WP_153758689.1\|1072353_1072833_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP045851.1\|WP_153758703.1\|1086117_1087035_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NZ_CP045851.1\|WP_153758704.1\|1087115_1087382_+\|ATP-synthase-F0-subunit-C	unknown	unknown	gnl\|CDD\|169138

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153758697.1\|1080916_1082413_-\|hypothetical-protein	gnl\|CDD\|236204	PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.	0
NZ_CP045851.1\|WP_153758701.1\|1085447_1085810_+\|hypothetical-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	1.43384e-09
NZ_CP045851.1\|WP_153758694.1\|1078493_1079558_+\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP045851.1\|WP_153758692.1\|1077202_1077436_+\|50S-ribosomal-protein-L31	gnl\|CDD\|234576	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed.	1.17084e-38
NZ_CP045851.1\|WP_153758696.1\|1080460_1080913_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	1.50046e-20
NZ_CP045851.1\|WP_153758698.1\|1082411_1082939_+\|ribose-5-phosphate-isomerase-B	gnl\|CDD\|376799	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase. This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).	1.60161e-77
NZ_CP045851.1\|WP_153758700.1\|1084202_1085375_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	5.79143e-66
NZ_CP045851.1\|WP_153758688.1\|1069673_1070978_+\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP045851.1\|WP_153761087.1\|1075467_1077120_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP045851.1\|WP_153758705.1\|1087392_1088091_+\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	2.01667e-33
NZ_CP045851.1\|WP_153758699.1\|1082938_1084186_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP045851.1\|WP_153758691.1\|1074074_1075175_+\|phosphotransferase	gnl\|CDD\|367273	pfam02958, EcKinase, Ecdysteroid kinase. This family includes ecdysteroid 22-kinase, an enzyme responsible for the phosphorylation of ecdysteroids (insect growth and moulting hormones) at C-22, to form physiologically inactive ecdysteroid 22-phosphates.	6.29303e-13
NZ_CP045851.1\|WP_153761086.1\|1070983_1072357_+\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP045851.1\|WP_153761085.1\|1068399_1069659_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	1.40726e-140
NZ_CP045851.1\|WP_153758689.1\|1072353_1072833_+\|hypothetical-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	3.4063e-09
NZ_CP045851.1\|WP_153758703.1\|1086117_1087035_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	3.26258e-59
NZ_CP045851.1\|WP_153758704.1\|1087115_1087382_+\|ATP-synthase-F0-subunit-C	gnl\|CDD\|169138	PRK07874, PRK07874, ATP synthase F0 subunit C.	1.68484e-22

>NZ_CP045851.1|WP_153758694.1|1078493_1079558_+|peptide-chain-release-factor-1
MLDRLESLEREFDDVEARLADPAVIADQSTYSEVAKRYRELDAIVSRSRQLRGLTEDLDVAREMLRDAAGDDRDEMRAEVEATEADIERLTEELRALMLPKDPNDDKNVIVEIRGAEGGEEANLFARDLFEMYQAYAGRMGWKSEVLGTDPSDMGGFNEVTFLVRGEGVWSRLHHEGGVHRVQRVPVTESQGRIHTSSATVTVLPEAAEVEVDIDPNDLQVDVYRSSGPGGQSVNTTDSAVRITHKPTGLVVSMQDEKSQIQNRAKALQVLRSRLLKLEQDRQAAELSDQRRGQVGGGGRSEKIRTYNFKENRLTDHRINLTLYKLDKVLAGELEDVIDALVAEERTRRLAEDG
>NZ_CP045851.1|WP_153758693.1|1077741_1078452_+|hypothetical-protein
MVWELDGTTPRRVEPDPPEPIGVPSPLTAEATLLLEQAGVDVVVEEGEVIGEVQGLEVARVVLDGPDGPARLEVGVGRFDREAFALIHGELSPPEALARVVADVGEHRRPGVEPHPINRLARERWLRRRIIDEPALVGAAALGAVDAARPRGGLRDPGIAVALGARSDGTPLVVACTTGIDLEAVPDAADARLRHAPQAELVIAVPARDAHRITRELAELLARPAEVVTVEGAWPT
>NZ_CP045851.1|WP_153758692.1|1077202_1077436_+|50S-ribosomal-protein-L31
MKADIHPEYKEVEVHCSCGATFTTRSTATELKSELCSECHPFYTGKQKLVDSGGRIDRFERRYGRRKKSAAAADSES
>NZ_CP045851.1|WP_153761087.1|1075467_1077120_+|transcription-termination-factor-Rho
MTIAQAMGGKPGSRTKKADIIDMIFELAGISPAEEAAATESPSESESESAAAEDAGEATGGTEAASEGEGGEEAAAGRRERDERPRQNGQQEQRGPKKDQQQKGEKAQQGQQQQGQQPKGQQQDQGGQQQKGQQQDQGGQQGDDDVEPGNRRRRRRGRDRDRNQPDDVAQAEPVEVEGLLDLRDEGYGFLRVNGIHPSKDDVYVSVKQTRQFSLRKGDWVKGASRPASRNEKNPALLRIDAVNGVDPDAATSRPRFEDLTPLYPDERLRLEAPGDPYNMTARIVDLVAPIGKGQRGLIVSPPKAGKTTIMKQIARSIEANDPDVHLMVLLVDERPEEVTDMRRSVTSAEVVASTFDRPAEEHVHVAELAIERAKRLVEAGEDVVIILDGITRLARAYNQAAPQTGRVMSGGIDAGAIYPPKKIFGAARNLEEGGSLTILATALVETGSRMDEVIFEEFKGTGNMELKLDRRLAERRIFPAIDVDASSTRHEELLFDNKQLQQVWKLRRVLSGMAAEGQAGASIELLTDRMRTFKSNDAFLAEVAKGATGT
>NZ_CP045851.1|WP_153758691.1|1074074_1075175_+|phosphotransferase
MGTKAVGGLACGPEDVDAAWFTAALRGSGTLAEAEVVDYDAEPIGTGQVGHNVRFTLRYDREEDGAPPTVVAKFPSPDETSRATGVAIGTYDKEARFYESLAGAVEIRLPRCHLVQHDEEAHLATLLFDDLAPAEQGDQIRGCSTAQAEVVVEELAALHAPMWDDPRLDDIGWLARPQPENGEAIQGFYGALWPGFCERYGDRLSDEARRLGERFGHGLATWSRRRVDGPHTVVHGDFRLDNLLFGVDGSRPVVTTVDWQTVAIGIGTDDLAYFLGAGLLPEDRRTHERQLVRRYHDLLVGRGVEGYDWERCWEDYCWFSLSGFQMAVVASMIVRADERGDAMFLAMAERHACQAFDLGADEVLPA
>NZ_CP045851.1|WP_153758690.1|1072889_1074011_-|hypothetical-protein
MLNPLDDLPVHQTPEPIAHYGSPSRNAYDRYFFNGYTPDGELFFAAAMGLYPNRKVLDAAFSVVHDGVQRSIRTSGRAPLDRRDTSMGPIRVEVVDPMRQLRVLVDDADRGFHVDATFTARTVAVEEPRFTFRSGTLVTFDYTRLAQWGTWTGTIEVDGRSWTLDEMAVRGCRDRSWGIRPVGERESGGAPGGLPQFFWLWAPINFDDVCTHFDTNELSDGRPWHQSGAIVPVLDSPDAPVIDPGDVAEPMRDVDWSIDWQPGTRRARGATLDLHPWRGGSERIELEPLVTFQMLGLGYLHPEWNHGAWHGELDVADDTLVLADLDPMDHAHLHVQQLVRARWGDRVGTGVLEQLVIGPHEPSGFTDLLDPAR
>NZ_CP045851.1|WP_153758689.1|1072353_1072833_+|hypothetical-protein
MTVSAEPAGAPPGFLEPVFGQRLLARLVDGIVVAGPVLLLTWAVGGRGGRALAVAAVSLYEVVAVSVAGRTVGKALFGTRVVDARTGAAPIPLQAVLRWMVLAGGAFVALLVPALEGLEVVWFWIAVLPVMSGPLHRGLHDRAARTIVTADAIDEEIAI
>NZ_CP045851.1|WP_153761086.1|1070983_1072357_+|threonine-synthase
MRYVSTRGTAPPLGFSDVLLTGLAADGGLYVPESWPRLAVREGATSYVDVAVDVMFPFVEGSIERDDFASMVDDAYAGFDHPDVAPLVQLDDDTWLLELFHGPTLAFKDVALQLVGRLFDHELARRGERVTIVGATSGDTGSAAIEALRDREAIDVVILHPKGRVSDVQRKLMTTVDAPNIRNVAIDGTFDDCQDLVKAMFADVPFRERQRLSAVNSINFARVMAQTVYYVTSQRRLGGPVSFAVPTGNFGNVFSGYGAMRMGVPIRRFVIGSNRNDILTRFLATGTMSISEVHATLSPAMDIQVSSNLERLLFELVGHDGAQIAELMARFRGEGTVTFPSELLDAVSESFSGFRVDDDETTAEIRRTYDETGLVIDPHTAVGVAASRAAGREQGIPMVVLGTAHPAKFPDAVEAAMGVRPELPPHLADLDVRPERVDELPNDLAAVEAYVAELTRA
>NZ_CP045851.1|WP_153758688.1|1069673_1070978_+|homoserine-dehydrogenase
MTTTPVRIGLLGCGNVGAAFVQLVERRHDEIANRHQIDLQITRVAVRNLSRERAVDLDEAVLTHDADAVVHDPDIDLVVEVIGGIEPARHLTLSALKAGKPVISANKELLANLGAEIYEAAGDAGVDILFEAAVAGGIPLIRPLRESLAGEDIRRVVGIVNGTTNYVLSRMAEEHVSFGEALAEAQELGYAERDPTADVEGFDASAKAAIIASIAFGVQVVAGDVYREGIAELTPGDLSFAARLGYVVKLLAIAERFDTPDGAEVAVRVHPAMVPEHHPLAAVRESFNAVFVEGAAVGDLMFYGRGAGGDPTASAVLGDVIDAALNLTNGRASRLSRLSEATIRPIDDLRSEYYINMDLADRPGALATVAGVFGDHGVSIRAMEQEGMGAEARLVFITHGAVESAVQSTLAAVRDLEVVDRVGSVLRVVGGDDS
>NZ_CP045851.1|WP_153761085.1|1068399_1069659_+|diaminopimelate-decarboxylase
MPLQLLPDHSTIAADGSLVIGGCRVDDLASEFGTPFFVYDEVHLRDRAREAVAAFGPGVAYASKAFLCTAMAALVHEEGMCIDVATGGEMRVALAAGVPADRLVMHGNNKSNLELEMALAEGVGRIVVDSFDEMDRIEALVAGGLPVPSVLLRITPGIEAHTHEFVKTGQDDSKFGFGLASGAARTALDRAHRSTAMHLVGIHVHIGSQVFVVDSFRKAVQTLAPLVNDLGLPEFSIGGGLGVAYVEGEESATITQWGAVMNQACRDAGITAQVSAEPGRSIAAAAAVTVYTVGTIKDLPGIRTYVSVDGGMSDNPRPVLYGSGYETFLPRAVAADRPREIRLVGKHCESGDVLVREGYVPDDLAVGDLLATPVTGAYGHSMGSNYNKVLRPPVVFVRDGDARLVVRRETYDDLLRLDV
>NZ_CP045851.1|WP_153758696.1|1080460_1080913_+|cyclic-nucleotide-binding-domain-containing-protein
MPATRVGVDTRGQQMFGRKAKADAEWLAGVSFFDGFTQDELERVAALAREVDAAPGAELTEQGRVGDVCYVIVEGTAGVYASGEHIASLSEGSMVGEMALIDHAPRNATVVAETEMVLAAFDPRSFHQLLDEMPKAKERVFATLNARLNR
>NZ_CP045851.1|WP_153758697.1|1080916_1082413_-|hypothetical-protein
MTAPHAGLDPRTPVIVGVGQVDLSNQESPPSASDPLELMAEAIRRAGTDAACDRLVASIESIRVVSILSARHPDPGRLVADRLGIHPADTALSPMGGNSPQSLVSSAALDIAAGRADTVVVTGAEPWRTRQAARRSGVELDWTPVDPDQAPARATGDDLDMSHPAELAHGIAMPVQVYPIFETALRSAAGHEPAEHLDRIAALWARFSDVAATNPYAAVRHRFTAAEIATPGPDNRWIGYPYTKWLVSNDRVDQSAAVVLCSVERAESLGVPRDRWVFPLAGTDTAEALVSRRRDLHRSPAIRVGGRRCLELAGVDVDDVAHLDLYSCFPSAVQIAADELGIGLDRQLTVTGGLTFAGGPWNDYVTHSIAAMVGVLREDPGSLGLVTANGGLISKHAFGLYSTEPPAGGFRHDRPQDAVDAEPGRDAVVEHEGEVTVEAYTVMHGRDGEPTQAIAACLLPDGRRTWATSSDAALMATFVDSEACGRAGRVAGGTLALR
>NZ_CP045851.1|WP_153758698.1|1082411_1082939_+|ribose-5-phosphate-isomerase-B
MGGDRRGWCPVTRIPTVTDLPSTSAAPPVRRVAIGADHAGFLLKQHLVATLRSLEIEVTDLGTDSEESVDYPPICAAVGREVAEGRADRGIVLGGSGQGEQIAANKVRGIRAALCNDLFTARLSREHNDANVLSMGGRIVAFGLADEILKVWLSTPYEGGRHQRRIDQIAAIEEP
>NZ_CP045851.1|WP_153758699.1|1082938_1084186_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MPWPSDTDPDAELQAILDRELERQNTTIQLIASENFTSPAVIAATGSVLTNKYSEGYPGKRYYGGNAVVDEAEDLARRRVCDLFGAEHANVQPHSGANANLAVYLAFLEAGDTVLGMSLDHGGHLTHGSPVNISGRMYDFVPYGVTESDERLDYDRIRDLAVEHRPKMIVAGATAYPRVIEPEPLRAIADEVGALLMFDAAHIAGLIAGGAHPNPVPHADVVTFTTHKTLRGPRGGCILTRSEHAAAIDKAVFPGLQGGPLEHVIAAKAVAFREAADPSFRTYAAQIVANAQALAQALGQQGFRLVSGGTDNHLMLVDLRPFDADLTGKAAQEVLDRAGITLNRNAIPDDPRSPFVTSGLRIGTPAVTTQGMTETEMPLVADLIARALRHRDDDAELSAVRDEVTTLCAKFTPYR
>NZ_CP045851.1|WP_153758700.1|1084202_1085375_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MTGWGPYGVVLAATALTTLVATGVWRWFAVRRRLVVPPDERKVHAVPTATLGGIGMLVGFGVGLLVAWGTGDFAEVFGASTEPLGVALAVVVIHGVGAIDEVRKSMGSPSYLHDGLSAPAKMAGMVLAGSILSIAGVTVLHFRVPFGESLGFGDLLVLSPDLSALVTVLWVLGMANAINFIDGLDGLAAGIVAIASGAFFLYADLLSDEGLIDGTNIGPLLAVIVLGMCVGFLPWNVHPAKIFMGDNGALMLGLLMAAATISVGGRSSDPFSGQTFFFYAPLFIPLVILGVPIVDTAASIIRRALRGSSPAAADKDHLHHRLMRLGHGQWRSVVILWLWTALLSGVVLYPAYTGEGNAVVPFGVAALGLALYTLFHPGVRAARAAAADDD
>NZ_CP045851.1|WP_153758701.1|1085447_1085810_+|hypothetical-protein
MAQSFTSVPPRCAPSRGPFVELSQRSEPTNNYGDGLSIAFELVGTPAIVGLLGFGLDRWLGTTPIFTIVLTLVALATVAGLTIWRYNAEIRRADAARRAARAERGPAPARWERRATGAAS
>NZ_CP045851.1|WP_153758702.1|1085806_1086262_+|ATP-synthase-subunit-I
MTTTVTTRFDETAPEAEIARDLARRGLWVAPALVALGALGWGVDGALSVAFGVAVVIGNFLLSAAMLTYAGRISLAFVMGAALFGYLVRLGLVAAAVLLVKDLGWVEIVPLALTLAITHLGLLFWETRYVSASLAYPALKPKPSGPSTTKE
>NZ_CP045851.1|WP_153758703.1|1086117_1087035_+|F0F1-ATP-synthase-subunit-A
MGRDRPARPDPRHHPPRSPLLGDPLRLGVAGVPGPQAQAQRSLDHQGVTSPVFGVAFPPISHLFEWPELLFEGTPLAVNKVTLINIGAVVLILGFFFIAGRKKALVPTGAQNLAESTVDFVRNGVILQTMGPSGLTWTPFFLFLFLFIFINNIVKVIPPILMPATGRMATPLFLALVVYVTWIYQGIKHQGLGGFLKSSMFPPGLPKALYLLVTPIEAISTFLIRPFSHAVRLFANMMAGHILLATFAVLSASLWVGQWYAVFLPFPFAMLLGVWLFEALASFLQAYIFVVLTGVYIGGSIHPEH
>NZ_CP045851.1|WP_153758704.1|1087115_1087382_+|ATP-synthase-F0-subunit-C
MLSVLAQEAAYNADYIAGQEALFSGVAYGLAAIGPGIGIGYLVGQAVQAMARQPEMAGQVRTTMFLGIAFAEALALIGFVVFILLKFA
>NZ_CP045851.1|WP_153758705.1|1087392_1088091_+|F0F1-ATP-synthase-subunit-B
MRIRTALAAVLLLVVATLGFASPAGAAESIGSCVAEVAAEVNALMEEGMSEYDALQEVEGQAEGCVEAPNPVLPELNELIWIGIAFIVLLALGMKFAYPAVASAMEARSEKIRSDLEAAERTRLDAEAEAEKYRASLGDAQAESARILDEARTSAESVRAERLAAAESEAAEIKAKAVADAEQIKAQALADLRSEVVALAVGAAEQVVQRNLDAAAQAELIENYINQVGSQN

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Crispr_ID: NZ_CP045851_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_3

1127558-1127632

Orphan

Consensus_repeat	Method
CTCGTCCATGGGGAGGCGCAGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045851_3

>merge|NZ_CP045851|3|1127558-1127632|CRISPRCasFinder
CTCGTCCATGGGGAGGCGCAGCACCGCCACCCGTGGCCCGGCTCCCCGAGGGCTCTCCATGGGGAGGCGCAGCAC

>NZ_CP045851|3|3|1127558-1127632|CRISPRCasFinder
CTCGTCCATGGGGAGGCGCAGCAC	CGCCACCCGTGGCCCGGCTCCCCGAGG
GCTCTCCATGGGGAGGCGCAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153761089.1\|1132427_1133723_+\|FliI/YscN-family-ATPase	unknown	unknown	gnl\|CDD\|274607
NZ_CP045851.1\|WP_153758751.1\|1133719_1134163_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758742.1\|1123819_1125016_+\|flagellin	unknown	unknown	gnl\|CDD\|236344
NZ_CP045851.1\|WP_153758740.1\|1121641_1123060_-\|flagellar-hook-associated-protein-FlgK	unknown	unknown	gnl\|CDD\|236084
NZ_CP045851.1\|WP_153758743.1\|1125117_1126713_+\|flagellar-filament-capping-protein-FliD	unknown	unknown	gnl\|CDD\|224264
NZ_CP045851.1\|WP_153758744.1\|1126732_1127170_+\|flagellar-export-chaperone-FliS	unknown	unknown	gnl\|CDD\|376819
NZ_CP045851.1\|WP_153758741.1\|1123059_1123569_-\|flagellar-protein-FlgN	unknown	unknown	gnl\|CDD\|377465
NZ_CP045851.1\|WP_153758737.1\|1119827_1120331_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758750.1\|1131669_1132377_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235562
NZ_CP045851.1\|WP_153761090.1\|1134420_1135179_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP045851.1\|WP_153758745.1\|1127169_1127502_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153761088.1\|1130669_1131686_+\|flagellar-motor-switch-protein-FliG	unknown	unknown	gnl\|CDD\|235561
NZ_CP045851.1\|WP_153758736.1\|1117812_1119831_+\|PASTA-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP045851.1\|WP_153758739.1\|1120742_1121633_-\|flagellar-hook-associated-protein-3	unknown	unknown	gnl\|CDD\|181087
NZ_CP045851.1\|WP_153758738.1\|1120327_1120690_-\|response-regulator	unknown	unknown	gnl\|CDD\|381150
NZ_CP045851.1\|WP_153758749.1\|1128984_1130664_+\|flagellar-M-ring-protein-FliF	unknown	unknown	gnl\|CDD\|235668
NZ_CP045851.1\|WP_153758748.1\|1128658_1128985_+\|flagellar-hook-basal-body-protein-FliE	unknown	unknown	gnl\|CDD\|376721
NZ_CP045851.1\|WP_153758747.1\|1128245_1128656_+\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|235556
NZ_CP045851.1\|WP_153758746.1\|1127898_1128246_+\|flagellar-biosynthesis-protein-FlgB	unknown	unknown	gnl\|CDD\|180196
NZ_CP045851.1\|WP_153758752.1\|1135190_1136429_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350657

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153761089.1\|1132427_1133723_+\|FliI/YscN-family-ATPase	gnl\|CDD\|274607	TIGR03496, FliI_clade1, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. [Cellular processes, Chemotaxis and motility].	0
NZ_CP045851.1\|WP_153758742.1\|1123819_1125016_+\|flagellin	gnl\|CDD\|236344	PRK08869, PRK08869, polar flagellin E.	7.96106e-80
NZ_CP045851.1\|WP_153758740.1\|1121641_1123060_-\|flagellar-hook-associated-protein-FlgK	gnl\|CDD\|236084	PRK07739, flgK, flagellar hook-associated protein FlgK; Validated.	1.18304e-107
NZ_CP045851.1\|WP_153758743.1\|1125117_1126713_+\|flagellar-filament-capping-protein-FliD	gnl\|CDD\|224264	COG1345, FliD, Flagellar capping protein [Cell motility and secretion].	1.41659e-41
NZ_CP045851.1\|WP_153758741.1\|1123059_1123569_-\|flagellar-protein-FlgN	gnl\|CDD\|377465	pfam05130, FlgN, FlgN protein. This family includes the FlgN protein and export chaperone involved in flagellar synthesis.	1.47636e-07
NZ_CP045851.1\|WP_153758750.1\|1131669_1132377_+\|hypothetical-protein	gnl\|CDD\|235562	PRK05687, fliH, flagellar assembly protein FliH.	5.66754e-26
NZ_CP045851.1\|WP_153761090.1\|1134420_1135179_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	3.21876e-44
NZ_CP045851.1\|WP_153758744.1\|1126732_1127170_+\|flagellar-export-chaperone-FliS	gnl\|CDD\|376819	pfam02561, FliS, Flagellar protein FliS. FliS is coded for by the FliD operon and is transcribed in conjunction with FliD and FliT, however this protein has no known function.	2.72867e-30
NZ_CP045851.1\|WP_153761088.1\|1130669_1131686_+\|flagellar-motor-switch-protein-FliG	gnl\|CDD\|235561	PRK05686, fliG, flagellar motor switch protein G; Validated.	8.69389e-119
NZ_CP045851.1\|WP_153758736.1\|1117812_1119831_+\|PASTA-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.85222e-87
NZ_CP045851.1\|WP_153758739.1\|1120742_1121633_-\|flagellar-hook-associated-protein-3	gnl\|CDD\|181087	PRK07701, flgL, flagellar hook-associated protein FlgL; Validated.	1.48645e-79
NZ_CP045851.1\|WP_153758738.1\|1120327_1120690_-\|response-regulator	gnl\|CDD\|381150	cd19923, REC_CheY_CheY3, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY3 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY3, Escherichia coli CheY, and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.65894e-31
NZ_CP045851.1\|WP_153758749.1\|1128984_1130664_+\|flagellar-M-ring-protein-FliF	gnl\|CDD\|235668	PRK06007, fliF, flagellar basal body M-ring protein FliF.	1.65133e-128
NZ_CP045851.1\|WP_153758748.1\|1128658_1128985_+\|flagellar-hook-basal-body-protein-FliE	gnl\|CDD\|376721	pfam02049, FliE, Flagellar hook-basal body complex protein FliE.	8.9864e-17
NZ_CP045851.1\|WP_153758747.1\|1128245_1128656_+\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	2.08992e-36
NZ_CP045851.1\|WP_153758746.1\|1127898_1128246_+\|flagellar-biosynthesis-protein-FlgB	gnl\|CDD\|180196	PRK05680, flgB, flagellar basal body rod protein FlgB; Reviewed.	2.89917e-16
NZ_CP045851.1\|WP_153758752.1\|1135190_1136429_+\|hypothetical-protein	gnl\|CDD\|350657	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains. The flagellar hook-length control protein FliK is a soluble cytoplasmic protein that is secreted during flagellar formation. It controls hook elongation by two successive events: by determining hook length and by stopping the supply of hook protein. It contains an N-terminal domain that determines hook length and a C-terminal domain that is responsible for switching secretion from the hook protein to that of the filament protein, by interacting with FlhB, the switchable secretion gate.	2.00832e-19

>NZ_CP045851.1|WP_153758745.1|1127169_1127502_+|hypothetical-protein
MAASSVAAWSAALDEVEEGLRVADRIARGEADLQVPAWIAPAELGPLPAELAPRLRLVMASLEAVHGDLVEARERAAAELAELAEAARAPGRRPVAAGEPPAPRLVDHSA
>NZ_CP045851.1|WP_153758744.1|1126732_1127170_+|flagellar-export-chaperone-FliS
MYATATSARHKFVSDGVGSTPPERLLVMLYDRLLRDLDDATGAIERADVGASHDALTHAQDIVAELHSALDPTRWDGADAMAGLYAYLAELLGRANMAKSAALVAEARSVIAPLRDTWAEAYASTAAAAPVAAASRPAGGLDVAG
>NZ_CP045851.1|WP_153758743.1|1125117_1126713_+|flagellar-filament-capping-protein-FliD
MSYIDGIASGLNTTDIINQLMQVEAIPQTLLKNKATTVKAGLDAYAAIRTKFSSVRTAADALHSSSSWRGLAATSSNPDAVGVTARSGAAGGAATFSVVNLAQAMQRSSTDAFASTDAALDGRSLSITSGDHTFSSTATTLDELVAEINADGELGVTASTVQVRPGEHQLVLTAATSGVANGFTVADSGWTSGFAVTRTAEDAVLDYGGITVTRPTNTIDDLVGGVTLTLKAETTGPVTVNVARDADGITKKVKALVEAVNGALAEMKIRTAYDAETNQRSSLTGDATVRQLTGLLTGALADPVAASSLGSVGLAGVELTRDGKVTFDEAEFKAAYAADPAAVERLFVAGGTSTSADLAWTYAGWRAQPGTYAVEVTRTGADTYTATIDGETAAVTVNDDGSLKIAADSVHSRLGGLTVSLSTDATAALVEGVPSGVGSITYDPGAARRLSTVANRALDAVDGLLTSAEDARKARIDDINRQVEAWELRLEKRELGLRRQYTALETMMGQLANQGQWLAGQLGSLQANSPK
>NZ_CP045851.1|WP_153758742.1|1123819_1125016_+|flagellin
MGTMRINQNISALNSYRNLSNTNTVMGKSLEKLSSGFRINRAADDAAGLVISQGLRAQVSGLRQATRNAQDGISVVQTAEGALNEVHSMLNRMRDLAVQSVNASNDSDARTAANNEITELKGEIARIADQTKFGSQKLLDGSFGATPASVTGVDADGAYTVAANDDFTLNINGTGAVTVELSALTGANATDTASALQTAIRSALAASGDADIQAFADKVTVTGETVGTGSSLTLEISGLADGETFTLTEGTNNPLAALGLGGAITAADGDAALFQVGANAGETIEVKGIDLAAVATAITGDVTTAANATAFISAMDDAIADVSGFRGQLGAVQNRFESTINNLQVTTENLAASESRIRDTDMALEMVSFTRHQILTQAGTAMLGQANQLPQGVLRLLG
>NZ_CP045851.1|WP_153758741.1|1123059_1123569_-|flagellar-protein-FlgN
MSTTRADERLSQLSQTLWRQRAQVELLLYRLEVQQMVLASGRSRWIDQSARDVEDAIDDLRTEEILRAAHVAAVAPGYGLGPDATLSMLADAAGEPWGQILRDHQATFLSLIGSIESVSRDNKELLAKGLRDTQDFVAQIGDGPRLDGYAPNGGGTRSLARPTLVDWDV
>NZ_CP045851.1|WP_153758740.1|1121641_1123060_-|flagellar-hook-associated-protein-FlgK
MSNFSALQTALSGLIAHQRALQTAGHNASNAATKGYSRQRVDLVSAGAGVVPAVWSKTDGIGNGVRAAGVVRIRDEFLEARALREAGSLSLLRTQATSLGRVEMIFPEPSDVGLAHQLSELWGAFDDLANQPGASAPRVALLERARTVADELNRGAAELTNLHRSALEQAEALTSEVNATAARVAELNGAVRNATAAGLDAHDLADQRDLLIERLGELVGVTTRQGELGTTDVFLGGSSLVRGDRYEQLQVVETTDPTAHPDFTEVEVQWAKDGYRANVADGEVGGLLDTTNRMIPHYLSELDAVAATLASTVNAVHEGGFDLDGAAGLAFFTGTTASDLAVNAVVAADPRRVAAAGSDGGAPPASAGPLDAGNATLLARLGEGQNSADAVYKRMIGGLGVETQATNRREQIQTEVVVQVDAARDSVKGVNLDEEMTSLVQSQHAYAASARLMTAVDEMLDTLISRTGLVGR
>NZ_CP045851.1|WP_153758739.1|1120742_1121633_-|flagellar-hook-associated-protein-3
MNRVTNTSASRTMLASIHRNARQLNDSQERIATGKQVRRPSDGPAQVLSALDYRAQLRRNEQMKRNSLDARAWLDNADSSLTHAVDRLTRARTLVVGAINGSADAQSRAAYAAEIRAIREELVQTANTQYLGRPIFAGTSDATSAYAADGTYLGNEGQVQRNVAPDVSIRVNRTGPEVFGTAADPDGNVFQVLEQIAAALDAGDTGAASAGLEAIGRAADRIERAQVEMGARSKQVEEIGFRNAEVDVELKASLSEVEDVDIAETLIEVRIQEMAYNAALSVTAKVIQPTLLDFLR
>NZ_CP045851.1|WP_153758738.1|1120327_1120690_-|response-regulator
MNKILLVDDSKTIRMLIKRNLRQAGFDQAEILEAEDGAQGLAVAKAENPDLILSDWNMPEMSGMEFLQALRADGIQTTFGFITSETTPTYKEQALAAGASFLLSKPFNADSFAEALGVVA
>NZ_CP045851.1|WP_153758737.1|1119827_1120331_-|hypothetical-protein
MRPPVDVAGPPVPIQEAVGEFVTALVGRGCAASKVALTPIEPDGAHVVAAYRDTQGRVLALSVADLDFAAGTGASLGMIPANAAHESVAAGELEETLFENYQEVANIMMSLLNSPTSPHLKLDAVWSTADEAVPDEVWDLVRNPGKRREFAVTIEGYGSGRLGIIIR
>NZ_CP045851.1|WP_153758736.1|1117812_1119831_+|PASTA-domain-containing-protein
MALSRMSDLIGRVLDGRYRLVAPIGTGASGRVFLADDVRLRRRVAVKVLHPSLADDESFLRRFQAEAHAAAALNHPHVMAVYDWGRDDVPYLVTEYLGGGSLRAMLDKGRRLTVSQALLVGLEATRGLDYAHRRGFVHRDVKPANILFGDDQRLRIADFGLARALAEAGWTEPSGAVLGTARYASPEQARGEMVDGKADVYALGLTLIEAVSGQVPFAADTTIATLMARVDKEVELDDSFGPLRPVLERACRPDAAERPDAGALAVAFMAAAEKLPRPETLPLVGAVEGDVVGADPSDATIHGAEPDPTLASPVVNVPAPDPTTAVAVPADALSPRARRKAARAEAKAAKKASKEAATLAAAEADEGRRRRRWPWVLVALLVAAVVGVGTAVAVRNLTEPTLYPVDDYVGALADDVEEIVAEYGWTVERELERRTGVPVGTILEQDPAPDTELEEGAESVLRLVVAEGNELTDVPADLVGAPREQVEAALAEAGLAVGEVTEDWSEDVPAGHVIEVRIPEDQLVEGQLPEETAIGLLVSAGPIPRTLPGVAEGASYDSVAADLEADGLVPERVTEASETVPEGAVIRTEPGEGEQVPRGSTVRVIVSSGLPFVTVPDVAGMDEDEAIERLEDAGLTVGTRVGPPRRSVLVTDPPAGESVRQGTEVTIYTRST
>NZ_CP045851.1|WP_153758746.1|1127898_1128246_+|flagellar-biosynthesis-protein-FlgB
MIVSDATMRALHTALTGLNARRQAAEDNIANVETAGYTAKKVDFEDSLRTAIERGEPRAVDISVTRSLAPTRMNGNNVAIDEEMVGLTETALRHQLVVEGMNTKFRLLRTSIVGQ
>NZ_CP045851.1|WP_153758747.1|1128245_1128656_+|flagellar-basal-body-rod-protein-FlgC
MSALFGSIAIAGSGMGVYKTWIDATADNVANVNTVRSTDEAAFQQRFVVSAAAENGAGQIGNGARVAGVLFGDAEGRLVYDPAHPLADEQGMVRHPDMNLSDQMTNLIIAQRAYQANVTVFERARDAYLRGLEIGR
>NZ_CP045851.1|WP_153758748.1|1128658_1128985_+|flagellar-hook-basal-body-protein-FliE
MAIIPPLGAVGASPAVAFEPAVRPLTSPGSADEKDGVDFGTAVVNALENLQASHATTDRLAEAAATGDLRAVEDYMVMATETQLATQLTVAVRNRAVESFNEIMRMQV
>NZ_CP045851.1|WP_153758749.1|1128984_1130664_+|flagellar-M-ring-protein-FliF
MAGFDLAALKERASTVNAGFTKGQKALMIGGTLAVVVGLVVFTKLAGGTDYATLYANLEPGDAAAVTERLDADGVSYELADGGGTIRVPRDVLYETRMQLSADGVASGGQEGWSILDGQGITASEFSQRVGYQRALEGELARTIRSIEGVESATVHLALPRDTAFALDDTEASASVLISTRGGTTLDSMQVQAIVNLVASSVDKLEPSDVTVADSSGMVLAAPGQRSVDYAGNDLNMRQAAAFEERVAADIRSMLTSVLGPNNAVVSVSAELDFDEATITRETYTQPLTDPAGNPLPLTESNRTETYTGEGTGAAGVLGAEDGGGEAGGAATEYNLDESDRTNAVDREVESINRAPGTIERLGIAVIVDEASTTPAMMAEIEQLVTAGADIRADRGDTLAVSRLPFDTSIQDTMADEAEAAEADAAAQARNDLYQTIGLGLLVGLVLLVSWLKMRKAAKRRRQAQAIEARAIEAALVPAGLTVGEATSALTQPAPADIDLAPVDALDLDAFDEAPAFPLGGDDPASRVASDVADMIDNQPDEVAQLLRGWLGDRRAGGR
>NZ_CP045851.1|WP_153761088.1|1130669_1131686_+|flagellar-motor-switch-protein-FliG
METHNIEKLTGAQKSAILIMTMGKERSAKVLKSMREAEVTEIMAEVARMANVDDRVVEQVLGEFAVTASARRHVAIGGVDVARELLEATVGERRADEIFEQLNMSMMSAPFEFLRKADPRLVLGFIRDEHPQTIALVLAYMTADSASMVLSGLPEELQREVAVRVATMDRTTPDIVATVESALERRLSSVIQQGDLSSVGGVQTLVDLLNRSDRATERLIFEGLENHDEVLADEVRSMMFVFEDILTLDDRSVQQVLRQVDSKDLALALKGVREEVKRKILDNISSRAAENLQEEIDMLGAVRLTAVEEAQGAVVRVIRALEEAGQIVLTRSGDEYVE
>NZ_CP045851.1|WP_153758750.1|1131669_1132377_+|hypothetical-protein
MSTSSSATVFPFADVTDLPTVTITRPSGTGDPHTDALRTAAWDEGYAAGRVEGRAAGHAEGLAAGRAEGLARGHAEGLAAGRDEARIEAVRDLAGALRALDAASAAADARDAVVLADIEAEVVDLALALAEAIIEREVRSVDDAARDAVRRALRLAPERGGLLVRLHPDDITHLGDLAELSPGRALEVVADPSVARGGCLIENDATQVDARIETALSRARAVLLGTSESAETVIA
>NZ_CP045851.1|WP_153761089.1|1132427_1133723_+|FliI/YscN-family-ATPase
MDAALSVAATRRTGRVTRVVGLTFEVAGVEAAIGDVVRVETSGDAMLGEVVAIGPDSVVAMPLGDLHGVRAGAPVEAAGGSISVPVGEELLGRVLDGLGRPLDDGPPLSGLARAALAGEPPHPLRRPPVEQPVHLGVRALDTMVPVGRGQRIGIFAGSGVGKSSLMSMIVRGTDADISVVALIGERGREVREFIERDLGPEGLARSVVVVATSDAPALVRLRAAFAATRIAEWFRDRGAHVNLLMDSLTRFAMAQREIGLSAGEVPATRGYPPSVFTLLPRLLERAGASEDGSITGIYTVLVEADDLNDPIGDSARSILDGHIALSRKLATAGHFPTIDVLESISRVAPAVTTPEQQAVATTCRRLMAAYREAKDLIEIGAYQAGTNPQVDEAVARRDAIDSFLRQGMDERVAPGEAWMELAALLGIGAAS
>NZ_CP045851.1|WP_153758751.1|1133719_1134163_+|hypothetical-protein
MKRYRFRLEQVARVRKLQEDQARAEVMRARQRLIEAGADLSQSIERLDGKPRSSGHLTPGRFRAERTEEELLARAVLAARLAESNARLLVHQRVDEWAAAAREVSTLERLDERARAEHEVAAARDTQIELDDLVTTRRAATPREVQP
>NZ_CP045851.1|WP_153761090.1|1134420_1135179_+|transglycosylase-SLT-domain-containing-protein
MTYLGVPYLWGGTDPNVGLDCSGFVQRVHRDLGIELPRVSRDQARGGQPVASLAEARPGDVLAFGEPVNHVAIYTGDRMMVHAPRRGDVVTHEPIDRPITAIRRYTPAAPVAAPAIGGAGWAPTGGGEAAFGDLFAAAGARHGIDPRILSAVARVESGYDPTAVSPAGARGLMQFMPATAAGMGIDPMDPAQAIDGAARYLTSQLRDFGSLELALAAYNAGPGAVRRHGGIPPYAETQNYVTKVMSILNGAR
>NZ_CP045851.1|WP_153758752.1|1135190_1136429_+|hypothetical-protein
MTALPVAAPTPATPPAGRQAPEGDTPEGEAFAAVVAGLEAAHTGTADTAETAEEAEVESVDGEDAAATGEEAATLAAVVPVVTLPAGAPATALSVDGAEATVPATPAPEALVAEVVAPAAPDAAAAAAPSPTTGEQADAAPAAQGAAPTATETGAPSVPIEAAAAPSEPTTGAAPLAPPAGEATEPQVAIDTPTDAGAHAGTDADAEVATEVPSTARTESAPAPAPASSSSTTAATTSVGDGPAPAASTAPAAESAPVDTATPSGLLDAPDADPWEQVATVVRPLRSAPDGTHRLSLQLRPAELGTVHLEVGVTDGRLSIRAVAENVMSRDALVAALPELRAELTGSGIDLGSVDVGDQTGHGSTDADRADDHGGVPGRRGVVGGGSTAGPAAVASGPTSHPAGPGRLDLAL

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Crispr_ID: NZ_CP045851_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_4

1363627-1363731

Unclear

Consensus_repeat	Method
GGTACGGATCGCGACAGCCAGGGT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP045851_4

>merge|NZ_CP045851|4|1363627-1363731|CRISPRCasFinder
GGTACGGATCGCGACAGCCAGGGTCGCGAGATGTACCCAGATCGGTCGCCCACGCCGGGCGGCAGCCGCCTGGGCGATCCCGGTACGGATCGCGACAGCCAAGGT

>NZ_CP045851|4|4|1363627-1363731|CRISPRCasFinder
GGTACGGATCGCGACAGCCAGGGT	CGCGAGATGTACCCAGATCGGTCGCCCACGCCGGGCGGCAGCCGCCTGGGCGATCCC
GGTACGGATCGCGACAGCCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153758943.1\|1370813_1371092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758945.1\|1372994_1374032_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NZ_CP045851.1\|WP_153758946.1\|1374039_1374528_+\|pantetheine-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234674
NZ_CP045851.1\|WP_153758935.1\|1362669_1363068_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|225209
NZ_CP045851.1\|WP_153758937.1\|1363836_1364271_-\|Hsp20-family-protein	unknown	unknown	gnl\|CDD\|107221
NZ_CP045851.1\|WP_153758928.1\|1354097_1355531_+\|DUF1800-family-protein	unknown	unknown	gnl\|CDD\|378055
NZ_CP045851.1\|WP_153758938.1\|1364441_1366235_-\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP045851.1\|WP_153758931.1\|1358214_1360632_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376913
NZ_CP045851.1\|WP_153761106.1\|1361187_1361535_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|377256
NZ_CP045851.1\|WP_153758944.1\|1371098_1373234_-\|melibiase	unknown	unknown	gnl\|CDD\|307952
NZ_CP045851.1\|WP_153758932.1\|1360628_1361096_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP045851.1\|WP_153758939.1\|1366287_1366530_-\|cold-shock-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758941.1\|1367009_1368662_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_CP045851.1\|WP_153758940.1\|1366683_1366878_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP045851.1\|WP_153758936.1\|1363087_1363450_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758934.1\|1362450_1362600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153758933.1\|1361657_1362356_-\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319817
NZ_CP045851.1\|WP_153758942.1\|1368663_1370817_+\|ATP-dependent-DNA-helicase-RecG	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP045851.1\|WP_153758929.1\|1355542_1357396_+\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|226587
NZ_CP045851.1\|WP_153758930.1\|1357399_1358218_-\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153758945.1\|1372994_1374032_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	3.46503e-59
NZ_CP045851.1\|WP_153758946.1\|1374039_1374528_+\|pantetheine-phosphate-adenylyltransferase	gnl\|CDD\|234674	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional.	5.35384e-84
NZ_CP045851.1\|WP_153758937.1\|1363836_1364271_-\|Hsp20-family-protein	gnl\|CDD\|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	5.32793e-25
NZ_CP045851.1\|WP_153758928.1\|1354097_1355531_+\|DUF1800-family-protein	gnl\|CDD\|378055	pfam08811, DUF1800, Protein of unknown function (DUF1800). This is a family of large bacterial proteins of unknown function.	2.90475e-122
NZ_CP045851.1\|WP_153758938.1\|1364441_1366235_-\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP045851.1\|WP_153758931.1\|1358214_1360632_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|376913	pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase.	0
NZ_CP045851.1\|WP_153761106.1\|1361187_1361535_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|377256	pfam04237, YjbR, YjbR. YjbR has a CyaY-like fold.	1.05869e-12
NZ_CP045851.1\|WP_153758932.1\|1360628_1361096_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.33845e-82
NZ_CP045851.1\|WP_153758944.1\|1371098_1373234_-\|melibiase	gnl\|CDD\|307952	pfam02065, Melibiase, Melibiase. Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.	1.65597e-117
NZ_CP045851.1\|WP_153758940.1\|1366683_1366878_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.39619e-19
NZ_CP045851.1\|WP_153758935.1\|1362669_1363068_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|225209	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only].	7.22818e-23
NZ_CP045851.1\|WP_153758941.1\|1367009_1368662_+\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_CP045851.1\|WP_153758933.1\|1361657_1362356_-\|HAD-hydrolase-like-protein	gnl\|CDD\|319817	cd07515, HAD-like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.71949e-47
NZ_CP045851.1\|WP_153758942.1\|1368663_1370817_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP045851.1\|WP_153758929.1\|1355542_1357396_+\|DUF1501-domain-containing-protein	gnl\|CDD\|226587	COG4102, COG4102, Uncharacterized protein conserved in bacteria [Function unknown].	1.77813e-45
NZ_CP045851.1\|WP_153758930.1\|1357399_1358218_-\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	7.49889e-74

>NZ_CP045851.1|WP_153758936.1|1363087_1363450_+|hypothetical-protein
MTLRDLHVDWSWVVVVTNAVAGVWALGAHRWAPLRHPAMWWFTIAAEVTIAVQVALGVALVAAQGYEVEQFHAFYGFVALVTVGLVYSYKAQIDPWRYVLYGFGGLFLMGLAIRAMTLPA
>NZ_CP045851.1|WP_153758935.1|1362669_1363068_+|antibiotic-biosynthesis-monooxygenase
MTVIKINAITVPADSGDELAERFAARAGAVDDQDGFEGFELLKPTDDRTTWLVVTRWRDEESFQAWVSSPAFGAGHRSEAGSGDEGGGHPHGGDHPHGGDHGHGGGEGAQRPVGISSELWSYVIAGGSNPSR
>NZ_CP045851.1|WP_153758934.1|1362450_1362600_+|hypothetical-protein
MAERPEDAPNPPKLARRAPVTEKVAIETEQPEVVDKVAALLGKWAEEDR
>NZ_CP045851.1|WP_153758933.1|1361657_1362356_-|HAD-hydrolase-like-protein
MIRLLGLDGDDTLWHSESHFAVTEESLAELLSPYADPDDLRRRMLETERRNLALFGYGVKGFTLSMIETAIEVSGGRVSVAEIQRIIDHGKGLLTHPVELLEGVSEVVDALDGRVRLVIVTKGDLFHQESKVAASGLAERVEGIEIVAEKDEATYQRVLGRYGVDAEEFLMVGNSVRSDVAPVLAIGGWAAHVPYHVTWELEVAEPDVDHDRFTALDSLRDVPALLDRLAAH
>NZ_CP045851.1|WP_153761106.1|1361187_1361535_-|MmcQ/YjbR-family-DNA-binding-protein
MEQRVREICLAFPEVTEKLSHGAPSFFVRKQFVMLWPDGHHDDELPHLWCAAPPGAQEELTTTEAERFFRPPYVGHRGWLGVRLDGDVDWDEIAAVCEEAYRTVAPKKLVAQLDG
>NZ_CP045851.1|WP_153758932.1|1360628_1361096_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MQVEMTVNGERVRGDVEPRTLLVHHLREGLGLTGTNVGCDTSSCGACTVHLDGRSVKSCTVLAVQAEGAEITTIEGLASNGSLHPMQEAFRQNHGLQCGFCTPGMVMAAVSLLEEHPSPTEDEVRHGLEGNLCRCTGYHNIVRSVLAAAETGGAS
>NZ_CP045851.1|WP_153758931.1|1358214_1360632_-|molybdopterin-dependent-oxidoreductase
MTISEDRIDLPASATSAGSILGVRRLRKEDPELLTGEARFVDDLVVPGALWMCAVRSPHARARIVSVDVAGALDVDGVRHAFSGADLADDWAAPMPCAWPVTDDMRNPTHHPVAAGEAKYVGDIVAVVLADSRSAAIDGAEQVVVDYEPLDAVVDLEDAATDRVLVHEDLGTNVSYVWELKPDEAAVDAAFAAAAHTVSERYVQQRLIPGAMEPRGVVAVPSPHGGEMTVYSATQIPHILKVMLAITCGLPEHKVRVIAPSVGGGFGSKLNVYAEEVLCTALAHRLGVPVRWTETRSEAAQATIHGRGQVQRIELAADERGSITAVRVDLLADMGAYLQLVTPGIPLLGAFLYHGVYDIPAYSFRCTGLFTDKVPTDAYRGAGRPEASYAIERAIDALARELDITPEEIRRRNYIPNEKFPYASAAGLEFDSGDYDTNLTAALELADIEALRAEQEERRDRGDTVELGIGLCTYVEMCGLAPSRVLASLNYSAGGWESATVRILPTGVVQVITGTAPHGQGHETSWSMLVADRLGIDPDQVEVLHSDTAVSPLGLDTYGSRSLAVGGTAIWHATERVVDKARRIAAHQMEADEHDLELVDGTFRVKGTPSREMALAAVAFEAFTAHDLPDGMEPNLEAQVTWDPPNFTFPFGTHVAVVEVDTETGSVHLRDYIAVDDCGNQVNPLIVEGQVHGGILQGVAQALWEEAVYDDDGQLRTVNFGDYMIPTPAEAPSFTLGATITPSPVNPMGVKGIGEAGTIGSAAAVMNAVIDALAPHGITDMDMPASPRRVWGALQDAASPREEEA
>NZ_CP045851.1|WP_153758930.1|1357399_1358218_-|xanthine-dehydrogenase-family-protein-subunit-M
MIPATFDYVRAESVDHALALLGEHGDEAKLLAGGHSLLPMMKLRLAVPSVLVDVGRLDDLSYIRHEGDVVRIGALTCHHDLETSDVLAAQCPLVAGVAAVVGDPQVRHRGTLGGTLAHADPASDLPAAVLALGGTLVARGPSGERRIPAADFFSGYFESALAPDEMLVEVELPATPGARWNYQKFNRRAQDWAIVGAVAVQNGHTGVALVNMGSTPLRATAVESALASGASHAEAAAVADEGADPVDDLNADVAYRRHLARVLTRRALDALT
>NZ_CP045851.1|WP_153758929.1|1355542_1357396_+|DUF1501-domain-containing-protein
MSHDCEPCRISRRALLKGAGAATTVAVAVPALGASAAFASTNATRRGDVVVNVFLRGGMDGLSVVVPRHEGAGAGHYVAARPTIAVDPAAVLPLTADFGLHPAMSSLMPLWAAGRLALVPTAGFPLNDRSHFTVQRQMDHGMAERTAADGWLARYLNTTPGTDPIGVRAANLPYGQRSMHGSTVSVTMGSIDRFRINGFAGPGGMAQAALRALHEGGSSLVDQRARQAIDALDLVAAAPIEPPANGAAYPTTGRGRRFGESMRQIAQLIRADVGLEAAATESSLGWDYHSGFGPYTDGAMQGSVEALAQVLAAFATDLGPLMDKVTVVLMTEFGRTFRENGNAGLDHGRASTMMVLGGGIRGGLYGDWPGLAPEDIDRNGLRVTADYRLVLADVLEHRLGVTDLAAILPGFTPDDAARLNLADPLVEPAAPVAVPSGATAELPPVAPADRPEEQTPEPADDAPAVAGPGTYVWVTPEQAVVHVEVPAPAGDPEVAPIEAARAALGGPVSSYVLVRIDNSSGTAPVVPPLMSVRSSDGVPSAYRESWIVLGEWIAASSGVDVAGAEALGADIRSRSTVEPGTSATLALVAAGAPSDVAEVRVGSGSSSVPLAQAVAAP
>NZ_CP045851.1|WP_153758928.1|1354097_1355531_+|DUF1800-family-protein
MRQARLLERVTFGATPALVDDVVRLGARGFLEQQLSLAPAGTSGVLTGPTILDATPPELEVLLDGVNRDRRIPHELRHAAVVRAATHPGQLAELMVDFWSNHLSTYSGTDDKNVKYAAPLDDRDVIRRHAMGRVAELVLASARSVSMQLYLDNFRSNATSPNQNYARELLELHTVGAGGGYDEGDVDQVSRILSGWGLQGNIGRFEETRFAFDPRRHDPSPLSVSITGPDGRPQVWSTPGRSGPEAEQDGIDFIDWLTHLPNTARFVCRKLARRFVGDDVSEQLVASMADVYLANDTRIVPVLRHMLTSREFESSRRTKVKTPFELLVGMIRATGATVDREAGGAATTTIGTLLTDLGHDKWSWPTPDGIPDDPNHWITTSTVLRRWELAGRLANGRLDGIGFDPLSLVPSPVPDTVGALVRALAERLGTGVDDAAISAISTYLGAPHDAPTSAIRVDRVAGDLIALLLSVPAYQYR
>NZ_CP045851.1|WP_153758937.1|1363836_1364271_-|Hsp20-family-protein
MLLRWDPFRDIDRTFDEIVGRTTAPPALAFDAVRRGDTVVVSVDLPGVSADAIDLTVERNVLTVKAERRPEQHDGDEVLASERRFGTFTRQLFLGDNLDTSTISADHRDGVLTITIPVAETAKPRKVEVAGATPEAHAIEATTA
>NZ_CP045851.1|WP_153758938.1|1364441_1366235_-|phosphoenolpyruvate-carboxykinase-(GTP)
MSTPTTNAKLVAWVDEWTEILQPDRVEWCDGSADEYQRLCQLLVESGTFRTLDEAKRPNSYLALSDPGDVARVEDRTFICSEEEIDAGPTNNWRPPAEMKEELLGLYRGAMKGRTMYVIPFSMGPLGSPIAHIGVQLSDSAYVATNMRIMTRMGQKVLDVLGDGDFVPCVHSVGAPLEPGESDVPWPCDADNKYITHFPETREIWSYGSGYGGNALLGKKCFALRIASTMARDEGWMAEHMLIVGVTPPNGETKYVAAAFPSACGKTNMAMLIPTLPGWTVETVGDDIAWMKFDDEGRLRAINPEAGFFGVAPGTGEDTNANALRTLDANCIFTNVALTDDGDVWWEGLSEPPAHLTDWRGNDWTPASDTPAAHPNARFTAPASQCPSISPTWEDPAGVPISAILFGGRRATNVPLVTQARDWEHGVFLGSIMSSEKTAAAAGTIGEVRFDPFAMLPFMGYNAGDYARHWLEIGEATEADKLPQLFWVNWFRKDQDGKFLWPGFGDNIRVLKWVLERVAGEADATETPIGFVPTVDALDLDGLDVDRNTMEQLLEVDKDSWKGEIPLIHDHFEFIGERLPQELRSQLDDLEDRLARG
>NZ_CP045851.1|WP_153758939.1|1366287_1366530_-|cold-shock-protein
MTVQGVIKSYDPVSRDGVVIRDTDLDEFDLAPGALDGSILRMLRQGQRVNFDLDADGRATRLGLGSEVDMGTPELPDGEA
>NZ_CP045851.1|WP_153758940.1|1366683_1366878_-|50S-ribosomal-protein-L28
MASVCSVCGKKPSFGMQLSHSHRRTKRRWNPNIQRVRAVVGSTTKRVDVCTGCLKSGKIQKAVR
>NZ_CP045851.1|WP_153758941.1|1367009_1368662_+|DAK2-domain-containing-protein
MTVLESLDAAALGDVMARFRDALRAHQAAINRLNVYPVPDGDTGTNMALTLESVVAEMDGAGDDLAAVCQAISHGSLMGARGNSGVILSQVMRGFTGVVRDAGTVDGQVVAQALVAAAESAYGAVMRPVEGTILTVVREASEAAAAAAGRGASLVEVLDAARQEGGESLSRTPQLLPVLAEAGVVDAGGSGFLLLLDAMLHVVDGRPVPEPTEDEGIVSDHPHLVTEHGHHDHDDVGDLRYEVMYFLEAPDESIPAFKDVWAGIGDSIVVVGGDGIWNCHIHTDDIGAAIEAAIDCGKPRNIRVTDLLEQVEEERWVRDAAAVPGEPAAAPEVPCAVVAVATGGGVRRLLGSLGVHHVVAGGQSMNPSTAQLLEAVEAAPAGEVVILPNNKNIVAVANQVDAQTTKTVTVVPTHSVAQGLATLLAYDPHSTAAANASSMAEVASGVTIGEVTTAVRDSTCDAGPITAGDFIGIAADGILAVSTELASAAIGLLERIVHDEHEIVGILEGEGATAAVTRRITEWLREHRPEIEVEIHNGGQPLYPYQFGVE
>NZ_CP045851.1|WP_153758942.1|1368663_1370817_+|ATP-dependent-DNA-helicase-RecG
MARSLGRLAAIPVTELKGVGTAKASSLEQVGIHTVLDLLTTYPRRYVDRTREARIADLVEGDEAMVVVRVTRSSSRRTRNRKVMVTADVTDGERTLRATFFNQPWRERQLSPGTQAILFGRFERYGGRPQMTNPVVDLIGDRTGRIIPVYPQSEKAGLMSWDLARWMDEVLERAGEFADPVPPAALDRFGLIGRTAAFRQIHAPESMAEVESARRRLVFDELLRVQLSLVERKQRLESESPGIAHAVDALPMLDRFVVDLPFPLTGAQQRVIEEIRADMGRPRPMHRLLQGDVGAGKTLVAVAMLLVAVEGGHQGALMAPTAVLAEQHAAGVRALLDGVEVDDPGTLLARRPLAVELLTNRTTAAERRKMLARLEAGEVDVLIGTHALIQEGVEFRSLGAVVIDEQHRFGVEQRAALRAANADGTVPDVLVMTATPIPRTAAMTVYGDLDVSVLDEMPPGRTPIRTEWVEVGAEGEVEGQETAAELAMWQHVRDEVADGRQAYVVCPLVEDSEKVEVASAEATYERLQGGELHGLRLGLLHGRVPPADKEQTMEAFRRGELDVLVATTVIEVGVDVPNATVMVVLDADRFGIAQLHQLRGRVGRGAARSHCYLVGSGATPDGRARLEALVRSTDGFELAEIDLDLRGEGTLMGERQKGRNDLKLASLRRDRDWVVKAREVAIDVISADPTLEHHQGLADELPLFLGDDESSEFLLKS
>NZ_CP045851.1|WP_153758943.1|1370813_1371092_+|hypothetical-protein
MSTPPGFPDGDDPFEPTGKWASPAIYARNWRQILLVDASLGVLVALVGVASMVWWNVYVGAFVAALGLTYVVAVGRRFLQWRWLRRRAGLDT
>NZ_CP045851.1|WP_153758944.1|1371098_1373234_-|melibiase
MDEVEGDPLAVSDQAGTIVRVDAGRTGLVWAVDASGRLRQVTLGPGGTGRSPDVPVHLYPLAYPTFGEEPLREPALRVTHADGVTSTRLRVTSVTSAPVDGHARCGDLVHRVALVDRAAPLGVDLVVRTWPCHDLLEQWVEVRNAGDGAVQLHAAAAFAPTFAGSDPHLTHWGGGWAAEWTETTERLSPGTKVVASAGGVRPSLHRAPVVHLAPDGRASETEGSVAAVAVAWGGDVRFDAEVALHGQQRLVVGHQHVGAERRLDPGGSFESPHVLWTWSDAGTGPASRSLQRFVREEVVRDGARPRAVVANTWEAVGFALHPDRLATQIDRAAEIGAELFLLDDGWFGVDHPRDDDTTGLGDWEVDRRKLPDGLGPLVDRTLAAGMRFGLWVEPEMVNPASRLYAEHPDWVIGEPGRDRRTERSQLVLDLCRPEVRRFVVDTVGRILTEHPGISYLKWDANRDLTEPGSSAVPADRQSHLAVDRVRATWAVMAEIAERHPDVELMLCASGGGRSDPGTLRWFHELWTSDDTDPVDRVRIQWGASHLLPANVLGAHVTRWGQRPLAFACAVAMSGRFGFDLDLDALSPDDLALCRRATDDYSAIRDLVQQGDHHRLVSPVGSDRCAVGYTDPRTGDGVVFLFRLAEGADGDEPEPPPVRVPWLDPHGDRAAIDRTPGGDHAALTVTGGRVAWPTGPAPCATVLHIPAVAPDR
>NZ_CP045851.1|WP_153758945.1|1372994_1374032_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MGDPQRGLPERFLAEGRVGQRVEVDGDVGRPTGAPGAQGDLAEPTGGVDGPHQAGATGVDADDGPGLVADGKGIALHLVHGPGRYRVRESEPGRLPAVPLSIVLVGHDQVPPVEAVLAPVDDEVTGEEPTGVVGRCDQVAATAAVDAVDGRRGPHRADATVPVREGPTLRIVAGTARGRRIEAPPGDAVRPTTDRVREATFNALWSMGVLDGAEVLDLFAGSGANGLEALSRGAARATFVERDRRTADVVRRNVEHLGFAERARVVVADALDHAPTAGHIDLVLCDPPYAFDGWDELLGSLRAEVVVAESDRPVEPPVGWELARSKRYGGTFVTILTATSHDPPE
>NZ_CP045851.1|WP_153758946.1|1374039_1374528_+|pantetheine-phosphate-adenylyltransferase
MAVVLYPGSFDPVHNGHLEIVETAARLFDQVIVAAMRNPQKGEPLFTLEEREQMITEVFAHLDNVKVTMFSSLVVDLARDVGADFIVKGLRAVSDFESELQMAQMNHAISGVDTLFIPSASEHSFLASRLIREVARFGGDVTPMVPPAVAARLDRKYGQARD

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Crispr_ID: NZ_CP045851_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_5

1730031-1730106

Orphan

Consensus_repeat	Method
GGTTGGGCGCGGTTGGTGTCACATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045851_5

>merge|NZ_CP045851|5|1730031-1730106|CRISPRCasFinder
GGTTGGGCGCGGTTGGTGTCACATGCGCCGGATGCCGCGCCCGAGCCGGGGGGTTGGGCGCGGTTGGCGTCACATG

>NZ_CP045851|5|5|1730031-1730106|CRISPRCasFinder
GGTTGGGCGCGGTTGGTGTCACATG	CGCCGGATGCCGCGCCCGAGCCGGGG
GGTTGGGCGCGGTTGGCGTCACATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153759241.1\|1730184_1730709_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153759235.1\|1722108_1722606_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP045851.1\|WP_153761142.1\|1726700_1727441_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP045851.1\|WP_153759236.1\|1722714_1723845_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|227278
NZ_CP045851.1\|WP_153759244.1\|1731814_1732510_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP045851.1\|WP_153759237.1\|1723894_1724665_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|236124
NZ_CP045851.1\|WP_153759243.1\|1731357_1731741_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319925
NZ_CP045851.1\|WP_153759245.1\|1732532_1733423_+\|phosphatidylinositol-mannoside-acyltransferase	unknown	unknown	gnl\|CDD\|236131
NZ_CP045851.1\|WP_153759250.1\|1737082_1737985_+\|pyridoxal-5'-phosphate-synthase-lyase-subunit-PdxS	unknown	unknown	gnl\|CDD\|179769
NZ_CP045851.1\|WP_153759233.1\|1720364_1721315_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP045851.1\|WP_153759234.1\|1721311_1722112_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP045851.1\|WP_153761141.1\|1725449_1726589_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|223293
NZ_CP045851.1\|WP_153759239.1\|1727487_1729455_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP045851.1\|WP_153759247.1\|1734581_1735133_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192
NZ_CP045851.1\|WP_153759240.1\|1729457_1729961_+\|HIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|238606
NZ_CP045851.1\|WP_153759242.1\|1730723_1731257_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153759248.1\|1735231_1735903_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320699
NZ_CP045851.1\|WP_153759249.1\|1735908_1737006_+\|DUF3048-domain-containing-protein	unknown	unknown	gnl\|CDD\|378618
NZ_CP045851.1\|WP_153759246.1\|1733432_1734509_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
NZ_CP045851.1\|WP_153759238.1\|1724766_1725423_+\|NADPH-dependent-F420-reductase	unknown	unknown	gnl\|CDD\|273873

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153759250.1\|1737082_1737985_+\|pyridoxal-5'-phosphate-synthase-lyase-subunit-PdxS	gnl\|CDD\|179769	PRK04180, PRK04180, pyridoxal 5'-phosphate synthase lyase subunit PdxS.	0
NZ_CP045851.1\|WP_153759235.1\|1722108_1722606_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.07623e-18
NZ_CP045851.1\|WP_153761142.1\|1726700_1727441_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.7744e-55
NZ_CP045851.1\|WP_153759236.1\|1722714_1723845_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	5.61945e-25
NZ_CP045851.1\|WP_153759244.1\|1731814_1732510_+\|hypothetical-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	5.37151e-18
NZ_CP045851.1\|WP_153759237.1\|1723894_1724665_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|236124	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI.	5.73817e-161
NZ_CP045851.1\|WP_153759243.1\|1731357_1731741_+\|hypothetical-protein	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	3.41248e-05
NZ_CP045851.1\|WP_153759245.1\|1732532_1733423_+\|phosphatidylinositol-mannoside-acyltransferase	gnl\|CDD\|236131	PRK07920, PRK07920, lipid A biosynthesis lauroyl acyltransferase; Provisional.	8.44011e-84
NZ_CP045851.1\|WP_153759233.1\|1720364_1721315_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.20507e-21
NZ_CP045851.1\|WP_153759234.1\|1721311_1722112_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	3.32403e-77
NZ_CP045851.1\|WP_153761141.1\|1725449_1726589_+\|cysteine--tRNA-ligase	gnl\|CDD\|223293	COG0215, CysS, Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	1.46433e-156
NZ_CP045851.1\|WP_153759239.1\|1727487_1729455_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP045851.1\|WP_153759247.1\|1734581_1735133_+\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	4.58229e-88
NZ_CP045851.1\|WP_153759240.1\|1729457_1729961_+\|HIT-domain-containing-protein	gnl\|CDD\|238606	cd01275, FHIT, FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours.	1.28613e-51
NZ_CP045851.1\|WP_153759248.1\|1735231_1735903_+\|M48-family-metalloprotease	gnl\|CDD\|320699	cd07340, M48B_Htpx_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	8.00932e-34
NZ_CP045851.1\|WP_153759249.1\|1735908_1737006_+\|DUF3048-domain-containing-protein	gnl\|CDD\|378618	pfam11258, DUF3048, Protein of unknown function (DUF3048) N-terminal domain. Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the N-terminal domain.	4.30845e-30
NZ_CP045851.1\|WP_153759246.1\|1733432_1734509_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.55663e-63
NZ_CP045851.1\|WP_153759238.1\|1724766_1725423_+\|NADPH-dependent-F420-reductase	gnl\|CDD\|273873	TIGR01915, F420-dependent_NADP_reductase, NADPH-dependent F420 reductase. This model represents a subset of a parent family described by pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. [Energy metabolism, Electron transport].	5.07126e-51

>NZ_CP045851.1|WP_153759240.1|1729457_1729961_+|HIT-domain-containing-protein
MPSLDRIWAGWRIPYIEASGAEEPPPGEGSLFERILALPDEEGMVVRRGRTCAALLNAYPYSNGHLMVLPNRAVAELEGLDDEEHAELWSLVRDGTAAIKAAYRPDGVNIGVNLGRGAGAGVPDHLHVHVLPRWAGDTNFMTSVAETRVLPEPLGDAWRKLRAAWPG
>NZ_CP045851.1|WP_153759239.1|1727487_1729455_+|threonine--tRNA-ligase
MADSITITLPDGSAKELPHGSTAADLAASIGPRLAKDAVIAVVDGTERDLTFELPDRAEVSIVTPNSDRGLYTIRHSTAHVLAQAVLDLFPGATFAIGPPVQDGFYYDFQLPEGGTFHEDDLERIEARMREIIAEKQPFVRDEIPDSEALELFRDHPFKLEIIKGAADDPMSATETGLVRTYENPPNFIDLCRGPHVPHTGRLGDFKLMRVAGAYWRGDESQPMLQRIYGTAWDTKQALADHLHRLEEAEKRDHRRLGVELDLFSFPDEIGSGLAVFHPKGGIVRRIMEDYSRRRHEEAGYEFVYSPHITKEGLFHTSGHLDWYADGMFPPMHLDDVGGEGGTDYYLRPMNCPFHVLIFRSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGMTQDDSHIFTTKEQMAEELDSLLTFVLDLLRDYGLDDFYLELSTRDEEKSVGTIEEWDEATAVLRQVGEARGLELVLDEGGGAFYGPKISVQARDAIGRTWQMSTIQLDFQTPQRFGITYTGADGQRHQPIMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRVLGVRDDHDDHAFALAERLRAAGFRADAVEANEPLGARIRRAKTEKLPYVLVVGDDDVANDTAGVNPRGGDVERGVGIDAFIERLAAEVAAHS
>NZ_CP045851.1|WP_153761142.1|1726700_1727441_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MVRPVLLTAWRVVVEGLENIPSEGPAIIAPNHTAAIDSFFIPAVLPRRIIYVGKSEYLDDWKTRRLFPALGMIPIDRSGGDASQRALATAKRVLERGELFGIYPEGTRSRTGRLHKGHTGMARLAIETGAPIVPVGIIGTREIQPPEVSVPLPLKRVQIRFGAAIDPHRYATRADDRLALRQLTDEVMFEIRELSGQEYDPTYATKGATPSAPPPDVIDVTAAADRRSSSEVLRPIASDAPHAEAG
>NZ_CP045851.1|WP_153761141.1|1725449_1726589_+|cysteine--tRNA-ligase
MRLYDTARAVVVPFEPGPVVTMYTCGITPYDATHIGHAAVYLTYDVLQRRLRDRGHETRCVRNITDVDDSILGKARELGVHYLDLAAAETARFQSDMEVLQVLPCWSEPRATSAIADIRGFIGMVLDQGHAYVSGGAVYFDISTFDRFGQVSNLPRETMLEYAAERGGNVDDPNKRDPLDFVLWQPSADDEPAWESLWGPGRPGWHIECSALALRELGTTIDLHGGGGDLIFPHHECEAAQSEAATGEPFVRHWMHQAMVRMDGEKMSKSLGNLVFVSDLRTAWDPRAIRLGVVGHHYRDSWEWDDQLMPDAQARLERWLAAGEGDGALDQVRAALDDDLDTPTAVAAIDAAAASGEGVSTAAMLLGVDLLDPPHAHLA
>NZ_CP045851.1|WP_153759238.1|1724766_1725423_+|NADPH-dependent-F420-reductase
MHIGVLGATGPAGSGLAARLAASGHEVIIGSRSHERAVEVRDELVGRWPDHALVIEAGDNQAAAGAEVVVIATPWDGASTTAASLVEQLDGKVVICMANALTRMGKEFQPLVPPRGSVAGNVQAALPGSRVAAAMHHIPAKELGDLSHPVESDVLVCSDHASATDVTSELIDSMPDMRALDAGSLALAAPIEAFTAVLLQLNVRYKTRAAVKFTGITR
>NZ_CP045851.1|WP_153759237.1|1723894_1724665_-|enoyl-ACP-reductase-FabI
MGILDGSRILVTGVLTDASLAFGVARLAQEEGAEVLLTGFGRGMSITQRTARKLPTTPDVLEVDVSSPEHLEALTTELQQRWGRVDGVLHAIGFAPEACLGDNFMNAGWDDVSVALHVSAYSYKALAGAVHPLMKEHGGSILGLTFDARVAWPAYDWMGVAKSALESTSRYLARDLGPDGIRVNMVAAGPMRTIAAKSIPGFAKFEDVWDERAPLGWDVNDSTAVSRTCVAMLSDWFPSTTGEMVHVDGGYHAMGA
>NZ_CP045851.1|WP_153759236.1|1722714_1723845_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MRAAVVCFVVLALVAGPVSAAGAQVDTSDLPPSYAEEIREAQARVDAATAEFADAETRRYEMEAQIERLQARLVDAEAALVGLRDRLRDMAVNEYVRAGSGTPTVFDEDINRQVRANALAEIVTESDTDALDAYRAATADLEQDREELDRLLAEQRELVADLESAQAEMVGELERLQELEAERQAEIQRREEEERRRQEEERRRQEEERERREREAAANRPANPPTTRPPSSNDPSPAPPPSSPPPSSGGWVCPVAGPHSFIDSWGAPRSGGRSHKGVDMMASTGTPVVAPVSGTVTHRGNSIGGLSFHLNGVDGHYYYGTHLSAYGASGQVQAGTVIGYVGDTGNARGIPHLHFEIHPNGGSAVNPTPTVRAACG
>NZ_CP045851.1|WP_153759235.1|1722108_1722606_-|MarR-family-transcriptional-regulator
MSPPAPSARPGTSSDDLASGAVPAAAGRAAARLARTVENALGGVDLSLPQYRMLVFLDDMGSSAASALAGRLGVSRPSVTALVDGLVARGFAERAADPADRRRVAHVITPKGRAALAAADEAVGRRLAELSSKISDPGARTSAVEGLVAWLDALNTEREAKLADS
>NZ_CP045851.1|WP_153759234.1|1721311_1722112_-|ATP-binding-cassette-domain-containing-protein
MTDGGPALLLSGVGVRIDGRTILHDVDWRVDAGQRWVVLGPNGAGKTTLLRIASLRLHPTTGRVEVLGGELGRIDVRRHRQRIGITSAAIAAALRAEVRTVDVVVTAARGALEPWWHTYEEAELEQAHALLADVGIGHLADHAIGTLSSGERQRALLARALMVDPGLLILDEPAAGLDLGGREALMAQLAALAADPSSPPSILVTHHLEEIPPGVTHALLLRDGAIHAAGPAAEVLTDGPVSSCFGVDVQVSASDGRFHARAVGGL
>NZ_CP045851.1|WP_153759233.1|1720364_1721315_+|alpha/beta-fold-hydrolase
MPDPSAVRLYATRLRQLAGRRPSDRPTAIAPDLPPGRVVSLPDRGDVFVREQDGPDGRPPILLLHGWLASAELNWFGTFDRFEGERRVVALDHRGHGRGMHPVDPFRLVDCADDAAALLDVLGIERAIVAGFSMGGPISLLLAARHPRLVAGLVPASTALVFNETLAERLRWRFIRLLELGVRLGAGDRLVARLAFDWGRVDERFAPHTSWLAGEFSRTLPRALREAGTELSRFDARPWAADLDIPAAMVVTGRDSLVPDHRQRALAAALDAPEILLGDQDHDAPITAVDRFADAIHRAVSLVDEALAAPAGRASA
>NZ_CP045851.1|WP_153759241.1|1730184_1730709_+|hypothetical-protein
MTEEHEAGPLDDAEVRDELPEDLQPSAFVGPYIFPNNNRRRIPGVLYLILGAACAALWAVASDESPLVNGGTLLAAVLLGLIGAYHLVAGWNLDVDERDALVAATSAVGFPVGHASAQMGWRGYLSRPTWRILLYSAEMPPRQRGLVLVDGVDGQVLEYFTEDNPEDWSDLSDA
>NZ_CP045851.1|WP_153759242.1|1730723_1731257_-|hypothetical-protein
MPEIDLSSMQPGDAAAALRSFPRRYRDAARTAATDLDGEPDEAALEEMARRPGPDGWSATDVVTAAADRLADAHDVLTRALVTDTAVPSHLTATPSQVPSGGSGTMEDALGRLDASSTRLAEVVDDADPERWTATLPVDDGGTTTPLQLLQTSVAPVVVWIREVDKVLRAVRGRPRS
>NZ_CP045851.1|WP_153759243.1|1731357_1731741_+|hypothetical-protein
MPSPTFTPGTNLAMKIPRATYDRTVAFYRDVLGFEVAEVVDSGAPTVSASHTVRFGAVTLWLDRVDNYTGPELWLEVRTDDLAAARGRLAEAGIEPCDEVEPLEGQGETSHWIANPAGVIHLLAGNG
>NZ_CP045851.1|WP_153759244.1|1731814_1732510_+|hypothetical-protein
MFDGHWRTNFERGLRPIGIGLRRTGLQADHLTGLGIGMAVASAVAIGAGALRGGLVLLILTGLCDFLDGALAKASGITNSRRGAFFDSVTDRLTDALLFGGVAWYLATTRPGLLPLLPMALLGAASLVSYQRAKAESLGFDARGGLMERAERFIFLGVALLFNEALIAILWVMLALTVITAGQRFVKVWRQAERPEPLPVPVRTRTAARRRTTRPVSQTWRERARTRQRNR
>NZ_CP045851.1|WP_153759245.1|1732532_1733423_+|phosphatidylinositol-mannoside-acyltransferase
MSRPPVVQLYRAGAALARAVPAPVARGVARTGGTVASRALHDRRAQVERNLRRVDPSLSGRHLRRAVDATFASYGRYWAESFRLTGLDAGHIDRGFSYTGYDHVVAAREQGSGVIIALPHLGGWEWAAFWLAAIEDVPVTAVVEALEPPELFEWFVDFRRALGMNVVPLGPAAGGEVLRALKAGHAVCLLSDRDIGGGGVEVELFGERTTLPAGPATLALRTGAPILPTAIYFDGDLHRARVDPPLAVERRGSLRDDVARVTQDLAHALEDLIRAAPEQWHLMQPNWPSDRADLGH
>NZ_CP045851.1|WP_153759246.1|1733432_1734509_+|glycosyltransferase
MRVGLICPYSLSVPGGVQYQVLGLARALRGLGHDARVLAPCDGPPPDAGVTPLGMSIPTAANGSVAPIAPDPAAQLRLMRALRDERFDVLNLHEPLVPGPNMTACLFKSEPLVGTFHAAGRIGAYTWARPALAWLATRLDRRVVVSEDARDLAETALGGTYDLFFNGIEVDRFAKATPWPTDGPTIFFIGRHEPRKGLAVLLEAMAELPPDVRLWVGGTGPDTDMLRARHAGDPRIEWLGRISDEEKARRIRGASAFCTPSLGGESFGIVLLEGMAARTPVVAADLPGYRNVARAGRDALLPPPGDVAALARALRTVLTDADRAASLVESGIERAQHFSMDALAARYLDLFDEVLASR
>NZ_CP045851.1|WP_153759247.1|1734581_1735133_+|LemA-family-protein
MVYFLIILVIVIALVAFVIISYNSLVSLRNRIENAWAQIDVQLKRRYDLIPNLVETVKGYATHEQETLERVIQARNMAVSAEGVHQQAEAENALSGALKSIFALSEAYPDLKANQGFLQLQEELTGTEGRIAYARQFYNDTVYKYNTKIQSFPSNILANMFSFSEREYFETDDETRGPVQVQF
>NZ_CP045851.1|WP_153759248.1|1735231_1735903_+|M48-family-metalloprotease
MVLGVLGALLGAWWLGALVGAVAGGAAVAWWLAGTSERVLQAVDAVPVPSGEQPRLRNLVDGLCATSGLPVPALSIIDVDAANSLAVGTSPDDTTLVLTRGLLDRLDRIELEGVVARELARVRRGEVALATLLVPLGSIAPGLLARFLPDRYDVRADIEAVGLTRYPPGLTRALEKTGTASAVPHVPRSTSHLWLDDPSPTGGEPPATAHSPIEERIATLQEL
>NZ_CP045851.1|WP_153759249.1|1735908_1737006_+|DUF3048-domain-containing-protein
MPTRPLRRATTLVALVLSLALLAVACGGDDDESASTTTAPSTTTTEATTTTTEPPPVMQLTGLPVPDGDELAPLRTAMIVKIDNNNSNARPQRGITTADVVIEEAVEGNESRFFAIFHTNLTDPVGPVRSARTSDIDLMPMFGRPTFSSSGGNAGTMGSIRDNDVAVVAGHDSPFGSFFFRLNNDGDIRRRGPHNLFVNLSELYAAAADQGSSPPPFATWRGADDALPETALPTFGVDITFGQNPIQWVWDEPAGGFLRWQRGTPHVDPDGTQVNADNVLLLMTPYAVSPFDATSPEARSVGSGEGWVLTAGQAIHGTWTRETREATYTFTDDEGNVVPLTPGQTWVELLKPQNPPSFLEADPRG
>NZ_CP045851.1|WP_153759250.1|1737082_1737985_+|pyridoxal-5'-phosphate-synthase-lyase-subunit-PdxS
MSNASPAAGRETGTQLVKRGLAEMLKGGVIMDVVDPEQAKIAEDAGAVAVMALERVPSDIRRDGGVARMSDPEMIEGIKEAVTIPVMAKARIGHFVEAQILESLGVDYVDESEVLTPADEVHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNIVEAVRHLRQILGDIRKITQADAAEQFEWAKQLQAPLPLVQEIHETGRLPVPMFCAGGIATPADAALVMQLGAEAVFVGSGIFKSSDPAGMAKAVVEATLNYQDPQILAKVSRGLGKAMPGLEIGGLETKLADRGW

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Crispr_ID: NZ_CP045851_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_6

3146829-3146897

Orphan

Consensus_repeat	Method
GGTACGGATCGCGACACGCACGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045851_6

>merge|NZ_CP045851|6|3146829-3146897|CRISPRCasFinder
GGTACGGATCGCGACACGCACGGTCGATCCCCGTACCCGGAACGGATCGGAGCGGCGCACCCACGATCG

>NZ_CP045851|6|6|3146829-3146897|CRISPRCasFinder
GGTACGGATCGCGACACGCACGGTCG	ATCCCCGTACCCGGAAC
GGATCGGAGCGGCGCACCCACGATCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153760475.1\|3152616_3153594_+\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|379128
NZ_CP045851.1\|WP_153761250.1\|3155437_3156394_-\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|235658
NZ_CP045851.1\|WP_153760464.1\|3138797_3139574_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP045851.1\|WP_153760470.1\|3146137_3146401_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153760468.1\|3143812_3144595_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223344
NZ_CP045851.1\|WP_153760476.1\|3153768_3154578_+\|HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP045851.1\|WP_153760465.1\|3139573_3142147_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_CP045851.1\|WP_153760463.1\|3135077_3138737_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP045851.1\|WP_153760471.1\|3146397_3146763_-\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP045851.1\|WP_153760466.1\|3142170_3142728_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225107
NZ_CP045851.1\|WP_153760479.1\|3157167_3159324_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP045851.1\|WP_153760472.1\|3147006_3147546_-\|O-acetyl-ADP-ribose-deacetylase	unknown	unknown	gnl\|CDD\|394878
NZ_CP045851.1\|WP_153760469.1\|3144875_3146099_-\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP045851.1\|WP_153760474.1\|3147939_3152457_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|137505
NZ_CP045851.1\|WP_153760467.1\|3142733_3143855_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|320688
NZ_CP045851.1\|WP_153760462.1\|3134434_3135070_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239314
NZ_CP045851.1\|WP_153760477.1\|3154603_3155350_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176859
NZ_CP045851.1\|WP_153761251.1\|3159451_3160234_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226098
NZ_CP045851.1\|WP_153760478.1\|3156506_3157073_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|213983
NZ_CP045851.1\|WP_153760473.1\|3147581_3147953_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377585

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153760475.1\|3152616_3153594_+\|DUF559-domain-containing-protein	gnl\|CDD\|379128	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin. AbiEi_4 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	0.00114973
NZ_CP045851.1\|WP_153761250.1\|3155437_3156394_-\|ATP-dependent-DNA-ligase	gnl\|CDD\|235658	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed.	3.50293e-97
NZ_CP045851.1\|WP_153760464.1\|3138797_3139574_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	1.30488e-108
NZ_CP045851.1\|WP_153760474.1\|3147939_3152457_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|137505	PRK09751, PRK09751, putative ATP-dependent helicase Lhr; Provisional.	0
NZ_CP045851.1\|WP_153760468.1\|3143812_3144595_-\|hypothetical-protein	gnl\|CDD\|223344	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].	4.08481e-56
NZ_CP045851.1\|WP_153760465.1\|3139573_3142147_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.88535e-24
NZ_CP045851.1\|WP_153760463.1\|3135077_3138737_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.77108e-53
NZ_CP045851.1\|WP_153760471.1\|3146397_3146763_-\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	3.47741e-23
NZ_CP045851.1\|WP_153760466.1\|3142170_3142728_+\|hypothetical-protein	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.87739e-11
NZ_CP045851.1\|WP_153760479.1\|3157167_3159324_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	1.70368e-86
NZ_CP045851.1\|WP_153760472.1\|3147006_3147546_-\|O-acetyl-ADP-ribose-deacetylase	gnl\|CDD\|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	8.71432e-86
NZ_CP045851.1\|WP_153760469.1\|3144875_3146099_-\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	9.24797e-41
NZ_CP045851.1\|WP_153760476.1\|3153768_3154578_+\|HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	8.16819e-40
NZ_CP045851.1\|WP_153760473.1\|3147581_3147953_-\|hypothetical-protein	gnl\|CDD\|377585	pfam05991, NYN_YacP, YacP-like NYN domain. This family consists of bacterial proteins related to YacP. This family is uncharacterized functionally, but it has been suggested that these proteins are nucleases due to them containing a NYN domain. NYN (for N4BP1, YacP-like Nuclease) domains were discovered by Anantharaman and Aravind. Based on gene neighborhoods it was suggested that the bacterial YacP proteins interact with the Ribonuclease III and TrmH methylase in a processome complex that catalyzes the maturation of rRNA and tRNA.	2.25297e-05
NZ_CP045851.1\|WP_153760462.1\|3134434_3135070_+\|redoxin-domain-containing-protein	gnl\|CDD\|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	1.61526e-131
NZ_CP045851.1\|WP_153760477.1\|3154603_3155350_-\|hypothetical-protein	gnl\|CDD\|176859	cd07817, SRPBCC_8, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.37185e-46
NZ_CP045851.1\|WP_153761251.1\|3159451_3160234_+\|hypothetical-protein	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	2.95974e-28
NZ_CP045851.1\|WP_153760478.1\|3156506_3157073_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|213983	cd12108, Hr-like, Hemerythrin-like domain. Hemerythrin (Hr) like domains have the same four alpha helix bundle and a similar, but slightly different active site structure than hemerythrin. They are non-heme diiron binding proteins mainly found in bacteria and eukaryotes. Like Hr, they may be involved in oxygen transport or like human FBXL5 (F-box and leucine-rich repeat protein 5), a member of this group, play a role in cellular iron homeostasis.	4.52115e-11
NZ_CP045851.1\|WP_153760467.1\|3142733_3143855_+\|hypothetical-protein	gnl\|CDD\|320688	cd07329, M56_like, Peptidase M56-like, integral membrane metallopeptidase in bacteria. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain beta-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	4.30317e-10

>NZ_CP045851.1|WP_153760471.1|3146397_3146763_-|RNA-binding-S4-domain-containing-protein
MDSTRVDRWLWSIRLCSTRSEATDVCRGGHVRVNGRPAKPATTVSIGDEVAARVHGRDRVVEVVRVIDKRVGAPIAVECYVDRSPPPPSREPSAAYAERSRGTGRPTKRDRRQIERLRDRG
>NZ_CP045851.1|WP_153760470.1|3146137_3146401_-|hypothetical-protein
MIDWLLRSRETGEIVVAQPPNVRNLVFVAATLGSWVLPDPRWRDRARSVATVALAAWAADEVVRGVNPFRRLLGAGGLLEVGRRLRH
>NZ_CP045851.1|WP_153760469.1|3144875_3146099_-|sodium:proton-antiporter
MDHYMVTLAVLGLAALGAAILPRLLDGVPLSIPIVFLALGMVFYALPIGLNGPSVDTEGQEAERLTEFVVIVSLMGAGLKLGRPIGWEGWQVTWRLLGIAMPLTIAGIALIAAGPLGLPLASAVLLGAVLAPTDPVLASDVQLEGPAEDDADDVVRFSLTSEAGLNDGLAFPFTNLAVAMAAGGSWFLGWVVDDVVVKLAVGVLAGWLLGRLVAHLAFSVRSVTALSRTSEGFVAIGATLLVYGVTELAHGYGFLGVFVAAVTIRNQERDHEYQQILHDFAETTERLASVLFLVLLGGSVVDGAWDGLTPLGVLAAVAIVFVVRPVAGWLATAWSDTSRAERIVIAFFGIRGMGSVYYLAHAVTEERFDAAREVWAVAILVIVMSIVVHGVAATPAMRWLDRRRAAA
>NZ_CP045851.1|WP_153760468.1|3143812_3144595_-|hypothetical-protein
MPEGDTLHRTAARLRPALVGAEVRRFEAPRLVGPRPRTGETIDEVEAVGKHLMVRFSGGIVLQTHLRMTGSWHLYARGERWRKPPHLARVVLEVPDAVAVCFSAPVVRTHLGEREASDAVAHLGPDLCRADADIDEAVARMARLDPGTEIGVALLDQRVAAGIGNVYKSEVLWALRVDPFAPVGALDEDVRRDLVETAARLLRANLTTTRRTTVPGGLAVYGKTRRPCRRCGTPIRARRQGEQARTTYWCPRCQSAARAP
>NZ_CP045851.1|WP_153760467.1|3142733_3143855_+|hypothetical-protein
MVELPLRTRLLVVGSAVRSALPWGLPFVGLVTSPWVQIAGLETGGDWTWDLSWGVVITAAVVPVLVALALVLLFPHDRYGDWAARRIAARTGARPSTRTINLTEQLAVATGTGGLRYDVLVHDSPVPNVAALPTRGGAHVVVTAGAERRLDRDALEALLASQIAVVVDPWVRLAAAAQVVGSLRFLLLFASPFLNPFLMPFAFVAFFRPRRADTVRDLVGDAAAVRATRHPGALARAFEELRPAAPHGSRMRVGLPGFLVDQFWVVSTRSKVTTTTSGPRGERTWTTADEVAAELAVRADRSRRVASGETPGGPDLRGWRRATAGLGRDATTSTGIPLALTDAERRTAAEIGAELAGTAGQGARAADWHRGHQ
>NZ_CP045851.1|WP_153760466.1|3142170_3142728_+|hypothetical-protein
MHATIPTPTVLVVAPADASPALVEAVEGEGIQVRSATPDELDGALTEAAVDVVVVVSGPEGLAAVARVARTTPATRYLAVADDLDPAAALDAGIGGVVAASAPPDVVRSAVRGLALGEGFLDAPLAREVLERHRREGIALTATEEEVLGRLARGDAAATIADDYAVTARLVRLHAGGALSRLLPT
>NZ_CP045851.1|WP_153760465.1|3139573_3142147_+|FtsX-like-permease-family-protein
MLRTTLRSLWEHKRRLISTTVAVFLGVSFMAGTFVLGDTLDESVESLVGEVTVGLDAQVRGPELFDTGFGVLYTPIDQSLVDVVAGVEEVEDAAGYVTVETGVQVLGADGDTIGMPNAAPTIVESFIPNPDISGYDIPEGRGVEAPDEMVINRAAAEDGELELGDTVTLTSSLGRTEYTLVGITTTVSGRDTIAGAILVGLATEQAQELAGLDGQINYVYATAAGGTTQEELVAAIGAELPSEPQLEVITGQQAADELTSTFQEGLSFFSTFLLVFALIALVVGSFIIFNTFSILVAQRGRELALLRAIGATRRQVLVSVLVEAVLIGLVAALIGIVAGIGLATGIYALLNSIGLELPKAGTIVSADTVIWSIVAGVGVTLFSALIPAWRATRVPPIAALRDVATDTSGTSKIRIGIGLALAVLAVVFIAPVYGEDPDTAALQSLGLGAVLLLVALIVLGPVIARPVARAIGAPLSWLRGTTGHLARENASRSPKRTASTAAALMIGIALVGFITILISSARVSIDEQVSRGLKADLIIRAESFGAGIPIAFEEEIAGRDDVATVAALRQGQVQLALPDGDTTTTFMGAINPERYDRAVEVQMVEGSLADLQPGGLVVDRRQAENRDLAVGDTVEVTFLPAANVAELTVTAISDDPQLLGFYTTTHEDWAANVPNQTNGTIFVSAAEGTTVDDLQRELRRAAEEYPGVLVENQDEFLDAIASQLNVILNVVLGLLVVSVLIALIGIANTLSLSVYERTRELGLLRAVGMTRSQLRASVRWEAAIIAVLGTLLGLALAVGLSYSLIQGLGPQGFSAFQVPVGQMAIIVVVGALLGVLASLLPARRAAKLNVLEAIASE
>NZ_CP045851.1|WP_153760464.1|3138797_3139574_+|ATP-binding-cassette-domain-containing-protein
MTATETTPTPAAGPARRAAARAVAARKTYGSGDTEVRALDGIDVEFERARFTAIMGPSGSGKSTLMHCLAGLDTLTSGQVFIGDTDLTTLSEKHLTTLRRDKVGFVFQAFNLIPTLSAIENITLPMSLAGRKPDQDWVDDVIRTVGLGDRLHHRPSELSGGQQQRVAVSRALASRPEIIFADEPTGNLDSNSGSEILGFMRRAVDDLEQSIVMVTHDPVAASWADRVVFLVDGRIVDEVHSPSREQIIDKMKDLEVPR
>NZ_CP045851.1|WP_153760463.1|3135077_3138737_-|tetratricopeptide-repeat-protein
MRTLRTHRRRVPGVSRGCERCHVPGCRSYAGSVICPSCGAPTPDGARFCPSCGHQLQVQVDERRIVTVLFADLVGFTGLSEKRDPEQVKLLVDDCFEALVEDIRSFGGRVDKIVGDAIVALFGAPVAHEDDPERAVRAALQMQGTLRSRAERLGARLQMRIGVNTGEVLVGALRAGGDYTAMGDVVNTASRLQTAAEPGQVLVGPATHAATTDVIEYEPVGSLEVRGRGVAVEAWRALAPLVPPGYGRRATRAPLVGRDGEMGLIGHALESAVVRRRAALVTLIGEAGVGKSRLAGEVARVASDDHGAVVLQGRCVAYGESNAWWPVAEAVRSGVGASLDDPVATVRSRVVDALTSPDAASLEGDELERVTNGLVHLMGLEGPLRGIDPARAREEVTRAVVRFLEPVLEQRPVMMVIADLHWASGPVFELLAALLERLVDSPFLLLTTARPPFRESWAPPDGRHNTLVVNVDPLARDAARDLLDRLLDGRVDSALREELLDRSGGNPLFLEELVALMSSGGGDLRTGGPQAALPDTLRGLVAARLDGLTRGERRALEDAAVYGRQGTVDALVLMAAADRAGHGKRSAEEVTAAVAGLVDKEILVLNERGDWYTFRSDLVREVAYNTLTKVARALRHYGIGEYLERNFTWGTEVSDGIVDGLAHHYGAAAEVVTDLDGVHGIPTDIVERALRWITEGARRSEAGDMHVVSERLFDRAVSLLSTDASPERVAMLLGRARARAELRHLDDARIDAEAARELSLQLEDRRGHAQALLILGSIEEKEGDLDLAVETLREAEDEFTASGDRAGMAEALRQRGLAELFSGDTEAARRTMAAALDAFAALADRRGQAWALQNLAWLAYLEGRPSEADRRIDESVEMFADIGDSGGWGWATGLRGWVRFHQGHWEEADAIGERILVEAQGRGDRWGEGMMVLLTASTRLWSGRAADAVGRAQEALEMFHALGDVDREVQSAAVLGRALVAIGAVGEGFRTLDLAVEMGRGEVGSAATLGPTAVAAAAVSVGDPERALRAVALVSVDDLDPSVVGESDRLVALGLALAQLGRLDDAVEHLQQAATPSMEEAPSGYALSALACASAVAGHVAEVERLCDEVRSAGRATYLDRVTALLALASCRVGACAPDAAEELFDEAAVLADATDDRVAQALVRLARAEAGDAVGRPDRAARSDATRRLAELGIDAGGWRQVYRGAALAAGAATTGAV
>NZ_CP045851.1|WP_153760462.1|3134434_3135070_+|redoxin-domain-containing-protein
MALHIGDTAPDFTAESTEGTINFHEYLGDGWGVLFSHPADFTPVCTTELGRVAALKPEWEKRNVKVLGLSVDPLDDHQRWSGDIAETQGTALNYPLIADPERKVADLYDMVPPAAENNLTVRSVFVVGPDKKVKLIITYPASTGRNFDEILRVIDSLQLTADYSVATPVDWKDGDDVIIVPAVSDEEAKERFPKGFTAVKPYLRTTPQPNR
>NZ_CP045851.1|WP_153760472.1|3147006_3147546_-|O-acetyl-ADP-ribose-deacetylase
MARLAALRRDITTLEVDAVVNAANSSLMGGGGVDGAIHRAGGPAILEECRAVVDRQGRLPTGEAVITTAGRMPARHVIHTVGPVWTGDDPSGHDALLASCYRTALALAAEHGLASVAFPAISTGIYGFPKDRAAGIAVGTVTDAVRAHPSIEAVVFACFSDADVDRYRRLGVPEDPDLV
>NZ_CP045851.1|WP_153760473.1|3147581_3147953_-|hypothetical-protein
MLLVDAANVVGSRPDGWWRDRPGAARRLVERLAAAADAGRLDPPIVVVLEGRARAGVDEGTAGAVQVVHATGEGDDAMVALAAAADGDVRLVTADRALAERARAEGATVVGPRWLLERVDADG
>NZ_CP045851.1|WP_153760474.1|3147939_3152457_-|DEAD/DEAH-box-helicase
MSLDRFSPAVRAWFDTSFPEPTAAQTEGWAAIASGEHALVLAPTGSGKTLAAFLWGIDRLANEPVPEAERRTRIVYLSPLRALAVDVERNLRAPLVGIGLAAERLGLTLHTPTVGTRTGDTPADERRRLVRNPPDILITTPESLYLMLTSQARETLAGVDTVIVDEIHALAPTKRGSHMALTLERLEEVTDRSPQRIGLSATQRPLDEIARFLGGRGDDGRPRPVTIVDAGTRKELDIEVVVPVEDMGALGEVIDGPADISVLPGGGGPAAAAPPVRRSIWPSIHPKVLELIEEHRSTLVFVNARRLSERLATRLNELAAGDENRGAEADGRPPEPAHELVKAHHGSLSRERRLLIEDELKRGDLKALVATSSLELGIDMGAVDLVVQVESPGAVSRGLQRIGRAGHQVGEPSRGRIFPKHRGDLVEAATVVRRMHEGLIEHTRYPRNTLDVLAQQIVAMVAMDDWHVDDLARIVRRSATFAELSDEVLFATLDLLAGRYPSDEFAELRPRIVWDRVEGTIRARAGAQRLAVTSGGTIPDRGLFGVFLPEGTRVGELDEEMVYESRVGETFLLGATTWRIEDITHERVVVTPAPGQPGKMPFWHGDRPGRPLELGRAMGELVRHVRGLPAERAMAELRERHGLDELAAQNLVAYLDEQAEATGAVPDDRTVVVERFRDEIGDWRVCVLTPFGAQVHAPWAMALRGRLQERWGVDIDLMWSDDGIAVRLPEAIDELPLEELLVEPEDIGDLVIRELPNTALFASRFRECAARALLLPRRRPDQRTALWQQRQRAADLLRVASAYPEFPILLETTRELLNDVFDLPALREVLSDLRSRKVRAVAVETPRSSPFAQSLLFGWIGQFMYDYDAPLAERRAAALALDRDLLHELLGAEELRDLLDPGALRDVQSDLQRLSEGRRARDADELHDLLRILGPLSTDELAERAEASPSVVDSWIAALVEERRAYVVVVGGDDRVAATDDAARLRDALGIAVPMGLPAAFTDPVPDPLGDLVARYARTHGPFLTAEVADRLGADRARIAQILERMEADGRVVRGEFRPDGTEREWCDPDVLRQLRRRSLAVLRNEIEPVDGSALGRFLPLWQGVGSARQGLDGLVEVVGQLQGAAIPMSVLEADVLPARLRGYRPSDLDALCTAGEVVWVGAGPLGSTDGRVRLIFRDQAGLLVTPPDDEPPSEPVHLALLEHLEQRGASFWPDLQRAVAAAELPYDDETVLAALWDLVWAGLVTNDSLAPLRALGTRAGRKGGGGGSARRRGPRAAARLARLGPPAAAGRWSLVAPLLEPLPTATESAHARAGQLLDRYGVLTREAALGEGAEGGFAGVYPVLKALEERGHVRRGYFVAGLGAAQFALPGAVDRLRAVRERGDDAGEPVVLAATDPAQPYGAALPWPPTDGRPARAAGAFVVLAGGVPAVYVERGGRTVVTFEGHDRVDWPRALAELVDRGRVRAFEIAKADGEPIGGTELAARLEAAGFVPGYRGMIRRAPR
>NZ_CP045851.1|WP_153760475.1|3152616_3153594_+|DUF559-domain-containing-protein
MGVTGPRQDGDMRPTIRRAIAERAQEQFGLVTRPQLVALGVDPGQVHRLVRTSHLERRGRHTFAIAGAPRSYEQSVLAACLDTGGVASHRTAARLHRLEGFRSVEVVEVTVGRRLHHAPLPDITVHTSTNLPPDDVLRIGAIPAVSAARTFFGLAALVPDVSRTSLRTALDTAARDGLVSDAWLWWRLEQLRCRGRNGIAEMELALRERQRLGPTESWLERRFLELLEGAGLPLPTVQRRVRHRGNSVARVDMSYDPLDLVIELDGHASHSTRAQRDRDERRRNRLVLAGLRLLVFTYDHVVRSPREVVEVVEAGLAAATAGRSA
>NZ_CP045851.1|WP_153760476.1|3153768_3154578_+|HAD-IIB-family-hydrolase
MGIDLVVTDLDGTLWETQDHLHPDTVAAVAELDRRGVPLLVATGRRLASTRAGLAGLGLTPPVVVLNGALVVDLATGEHIHRQSFGADAAAKVLDAFLGFGIEPCVYVEHPDVDVFVSDNPSTHPEHLASFGEWVRTGDLAEVVASHEVLAFGVLGLAPSSVEGLEDVLAPIANPHVSDERQFGGGSLTVTVAPPQLSKWDGIEAFCRHRGIDSGNVLAIGDGPNDLEMLDGARVAVVMADAHPAALARADHVVPRAADGGWAQLLTYL
>NZ_CP045851.1|WP_153760477.1|3154603_3155350_-|hypothetical-protein
MNHSVDIDLPVRTVYDQWTQFEDFPLFMKHVKDVRQVDDTTLEWTVSIYGIKRSWTAEITEQTPDQRVAWTAVDGTKNAGVVTFHALSDDRTRVMLQMEMDPDGFLESVADWGGYMSDRSRKDLEQFKDFIENRGRATGAWRGEVERDSARDLHHHEEELRQLSDADLARRAEAAGIERPLDRPREWIVSAVAHQERGDDRYGTQHDEGDERTHDWGRDEADGRHLRTDEDAERDRDIDVRDRDEARR
>NZ_CP045851.1|WP_153761250.1|3155437_3156394_-|ATP-dependent-DNA-ligase
MPRSLSPMLATLSKRAPTAPDGPATGEWVYERKLDGQRILAYCEGADVRLRSRTDKSADGAYPEIVDALHDQVASDCLLDGEVVAFDGPTTSFSRLQGRMGQHDPVLSRRSGIPVFFYVFDIVHLDGIDLTGLPLRRRKSLIRAAVRAGGPIRLSPHRRDGVALFEEACAKGWEGVIAKRIDSTYQPRRSTAWLKHKCEAGQELVIGGWTEPRGSRSELGAILVGHFEGDELVYAGKVGTGFDERTLRALGRQLRARARADAPFRPHPLLPRRDVHWVEPDLVCQVGFAEWTGDGLLRHPRYQGLRDDKPAREVVRER
>NZ_CP045851.1|WP_153760478.1|3156506_3157073_-|hemerythrin-domain-containing-protein
MDALALLTADHNRVRGLFARFEEAKEAEDVALMADLCQQIFTELEVHTSIEEDIFYPEVRDESEDLQEVVDEGIEEHHVVDVLMEEMKALEPGSDEWVAKMTVLIENVEHHAEEEESEMFPEVRSQTSAEFLDSMAEKLESRKKQLGAPTLADKIDLTKAELDEKAKEQQIPGRSKMDHDELAATVAP
>NZ_CP045851.1|WP_153760479.1|3157167_3159324_-|AAA-family-ATPase
MGLRKSSMAPTHPELEAEQAYIDKAYASLEASRAAAVRLKDMVEVGKGGTEQARWEREVIHDNIAQRLQALHVGDASLVFGRIDLEDAAGGDHFYIGRVAVADAEREPLVVDWRAPVAEAFYRATPRAPLGLVRRRHFASRGRTLLGIEDELFGDAAVAAVNGDGPTITGHGALIAALETSRTGRLGDIVGTIQAEQDEIIRSELPGILVVQGGPGTGKTVVALHRAAYLLYTHRFPLEGQGVLVVGPNRLFLGYIEQVLPSLGEAGVELAVLADLVDDVRVQGSDRGLTARVKGDLRMTGVVARAVRDRERALREPLRVGFGLTRLVLTVEDSARIVAEARRRYRLHNPARRFVESQVYEALAASGPEDLQPHTVRDRLHGSLEMREALEWMWPLLTPAELLHDLFGSKALLRNAAAGRLPSDVRRRREARGRRTGEGLSDDEWRSLHRPRSTAADAVIWTTDDVPLLDEARSLLGPRRKGDPLEVRTYGHIVVDEAQDLSPMALRVLGRRSLNGSMTIVGDIAQSTGAWAHDDWDEVIEQLPVKRPPRRAELTVGYRIPAPNMAMAARVLRVAAPDLTPPRSVRQDGDPPRVAAVDEPSRLADAVVDAALQEVDAVGQGSVAVICPLAMVDAISDTFAGRGIEHGRATRHGLDAQITVVPVGLVKGLELDASVVVEPAAIVEDEAQGLRALYVALTRATKRLAVVHARPLPDFLRE
>NZ_CP045851.1|WP_153761251.1|3159451_3160234_+|hypothetical-protein
MRVVTWNLWWRFGPWEERQAAIVATLRQLDPDLVALQEVWGQGDEEQAARLAAALGGYHHVAASTVEHEGVRFGNAVLSRWPITSHEWRPLPAPPDVEESRTVLRADVDGPRGPIQVFCTHLNWRWDQSAVRQEQVREIARFVADSPRRTFPPILCGDLNAAPEADEIRMLTGKAAVPVEGLVFHDAWEAAGAGPAETASRDNPFAAPDLAVDRRIDYVLVGWPAERGAGLPTACLVEGMRPVDGVVPSDHYAVLAELRY

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Crispr_ID: NZ_CP045851_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045851_7

3273731-3273806

Orphan

Consensus_repeat	Method
CGCCCGACCCCACGGGTTGGGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045851_7

>merge|NZ_CP045851|7|3273731-3273806|CRISPRCasFinder
CGCCCGACCCCACGGGTTGGGCGCGGTTGACGTCACCCACGCCGGATCCCGCGCCCGACCCCACAGGTTGGGCGCG

>NZ_CP045851|7|7|3273731-3273806|CRISPRCasFinder
CGCCCGACCCCACGGGTTGGGCGCG	GTTGACGTCACCCACGCCGGATCCCG
CGCCCGACCCCACAGGTTGGGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045851.1\|WP_153760596.1\|3279782_3280583_-\|DUF2510-domain-containing-protein	unknown	unknown	gnl\|CDD\|252175
NZ_CP045851.1\|WP_153760595.1\|3278857_3279766_-\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|238806
NZ_CP045851.1\|WP_153760587.1\|3269967_3272499_-\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214361
NZ_CP045851.1\|WP_153760598.1\|3282230_3283100_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|376824
NZ_CP045851.1\|WP_153760597.1\|3280594_3282220_-\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|223108
NZ_CP045851.1\|WP_153760588.1\|3272382_3273714_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP045851.1\|WP_153760593.1\|3276612_3278061_-\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP045851.1\|WP_153760590.1\|3274619_3275543_-\|TIGR03621-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|200301
NZ_CP045851.1\|WP_153760585.1\|3267909_3268233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153760594.1\|3278057_3278858_-\|type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|237347
NZ_CP045851.1\|WP_153760584.1\|3267494_3267887_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|377256
NZ_CP045851.1\|WP_153760582.1\|3266585_3266942_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153760580.1\|3264086_3265160_-\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|237395
NZ_CP045851.1\|WP_153761257.1\|3263691_3264096_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP045851.1\|WP_153760581.1\|3265169_3266543_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NZ_CP045851.1\|WP_153760592.1\|3276013_3276601_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045851.1\|WP_153760586.1\|3268326_3269889_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319790
NZ_CP045851.1\|WP_153760589.1\|3273891_3274623_+\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|376667
NZ_CP045851.1\|WP_153760583.1\|3267014_3267470_-\|DUF2087-domain-containing-protein	unknown	unknown	gnl\|CDD\|378279
NZ_CP045851.1\|WP_153760591.1\|3275612_3276017_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045851.1\|WP_153760595.1\|3278857_3279766_-\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|238806	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	1.79634e-103
NZ_CP045851.1\|WP_153760587.1\|3269967_3272499_-\|AAA-domain-containing-protein	gnl\|CDD\|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
NZ_CP045851.1\|WP_153760583.1\|3267014_3267470_-\|DUF2087-domain-containing-protein	gnl\|CDD\|378279	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087). This domain, found in various hypothetical prokaryotic proteins and transcriptional activators, has no known function. Structural modelling suggests this domain may bind nucleic acids.	1.61344e-18
NZ_CP045851.1\|WP_153760598.1\|3282230_3283100_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	4.5436e-156
NZ_CP045851.1\|WP_153760588.1\|3272382_3273714_+\|hypothetical-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	7.71746e-83
NZ_CP045851.1\|WP_153760596.1\|3279782_3280583_-\|DUF2510-domain-containing-protein	gnl\|CDD\|252175	pfam03803, Scramblase, Scramblase. Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site. Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury.	1.98317e-20
NZ_CP045851.1\|WP_153760594.1\|3278057_3278858_-\|type-III-pantothenate-kinase	gnl\|CDD\|237347	PRK13318, PRK13318, type III pantothenate kinase.	6.17845e-128
NZ_CP045851.1\|WP_153760584.1\|3267494_3267887_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|377256	pfam04237, YjbR, YjbR. YjbR has a CyaY-like fold.	2.54877e-05
NZ_CP045851.1\|WP_153761257.1\|3263691_3264096_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.09266e-15
NZ_CP045851.1\|WP_153760580.1\|3264086_3265160_-\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|237395	PRK13482, PRK13482, DNA integrity scanning protein DisA; Provisional.	0
NZ_CP045851.1\|WP_153760590.1\|3274619_3275543_-\|TIGR03621-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|200301	TIGR03621, F420_MSMEG_2516, probable F420-dependent oxidoreductase, MSMEG_2516 family. Coenzyme F420 is produced by methanogenic archaea, a number of the Actinomycetes (including Mycobacterium tuberculosis), and rare members of other lineages. The resulting information-rich phylogenetic profile identifies candidate F420-dependent oxidoreductases within the family of luciferase-like enzymes (pfam00296), where the species range for the subfamily encompasses many F420-positive genomes without straying beyond. This family is uncharacterized, and named for member MSMEG_2516 from Mycobacterium smegmatis. [Unknown function, Enzymes of unknown specificity].	4.64813e-62
NZ_CP045851.1\|WP_153760581.1\|3265169_3266543_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP045851.1\|WP_153760586.1\|3268326_3269889_-\|hypothetical-protein	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.63506e-11
NZ_CP045851.1\|WP_153760589.1\|3273891_3274623_+\|TSUP-family-transporter	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	9.22502e-09
NZ_CP045851.1\|WP_153760593.1\|3276612_3278061_-\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP045851.1\|WP_153760597.1\|3280594_3282220_-\|FAD-binding-protein	gnl\|CDD\|223108	COG0029, NadB, Aspartate oxidase [Coenzyme metabolism].	0

>NZ_CP045851.1|WP_153760588.1|3272382_3273714_+|hypothetical-protein
MDQTEEDVLGADVVVVEQACFFLRQHHHSAGPVGESFEQGNSLPRWGIRPSSVTPGGPNARRTWRPSPTTWRDGGEVPRSPLRRSPRPVREVRRGARRLGRRAGFPVASASVPAAPLHHNTSLLAALTEVEDALTSSVQTDDEFLTEVASHLIVAGGKRVRPLFSVAAAAVERPRIGDASRESVLGGVSVELVHIGSLYHDDVMDEAVIRRTVDSVNARWGNLRAILAGDFLLARASEIAASLGVEVAGLLAATIAKLCEGQVRELQSMFDVGRTEEAYLSSISGKTASLFASACRIGGIVADLDRDAIDAVTEFGQRYGMAFQMVDDVLDLTATEEQLGKPAGNDLVEGVYTLPVLRALELDGGEELRDLLGQPLEPAQIDRVRAIARVNGGIDAALAEARAQVDAAAVALAPFEGSEAAAALVGAAEHLLESVRAIASRHG
>NZ_CP045851.1|WP_153760587.1|3269967_3272499_-|AAA-domain-containing-protein
MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGGSSPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYSGPGGQPQGGEKAGATAGGSGEQSPSGSLVLDQFGRNLTQLAREKKLDPVIGRTREAERVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQAIARDDVPETLHNKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLEEYRKYLEKDAALERRFQPIKVEEPTVSHTIEILKGLRGHYETHHRVTITDQALVAAANLADRYISDRHLPDKAIDLIDEAGSRLRIRRMETPADYKDLENKIAEVTRKKKEAVESQDFEAAGRLRDEEKDLLGQKEAKEAEIKASGVDLFDEVDEEAIAEVLSIWTGIPVYKLTEEETAKLLRMEDELHKRVIGQEDAIKAVSQAIRRTRAGLKDPKRPSGSFIFLGPSGVGKTELAKTLAEFLFGDEQSLISLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTEAVRRKPFSVVLFDEIEKAHPDVFNTLLQILEEGRLTDSQGRSVDFRNTVLIMTSNLGTADLRKANLGFTKADEAVTYERMKEKVNDALKQHFRPEFLNRIDDTIVFHELSKAEVTNIVDLMIRRLQTQLEAQGIGLELTPEAKVHLADKGYDATLGARPLRRAIQRLIEDPMSERLLWKEFHAGETVVVDVGVDPEKPEEGDGIVFRTVEGFEPPPVELAETGPAD
>NZ_CP045851.1|WP_153760586.1|3268326_3269889_-|hypothetical-protein
MSRSRRSLLLLLVAAALVLTGCRADVTVAVDVDEEGGGTVDVTVVLDADAVARTEGIEDPELDDLVEAGWTVADPVEREDGGLELAASKPFADPTELGAVLREVSGPAGPYAQLGLAVDRPFGRTEMRFEGILDGTAGVESFADPEVAAALDGLPFGQDLTALEQELGAPIGSFVGLDLEVTLPGDPGDEGEPADEVAVWSTDLAADGPVPVLSTSEMWRMQPLLLAGAAALLVVLLVLLVLVKLVISWRRRRRRRREAKAERRRVAEAGSGATDAPVGDVDADADDTDAVRVVPAAVDPDVEEDADTSSAAAPAPASVSLDMVVLGGPGTTFGVRDQVDQLVAFARAKGSTLEYPKIADRYVEASRGALSSAELWAQLGVDGDPDELDAEMLGRYALTPGLREFVVRARERGYAVAYVGDGPASWAAHLRRTFRLDDLVDPWVVSADIGAVLPSIALFEGLRRISGVNPPNCLLIDDRLRVLEAARELGYGTAWYTPSGRAAEAPGHSIIRSFADLMSG
>NZ_CP045851.1|WP_153760585.1|3267909_3268233_-|hypothetical-protein
MEHLPPVGWASVATKDDLARQDDRSDARFAQVDARFAQVDARFAQVDDRFDRLEQVMNARFDAVDARFQTADANMRSYVDQAMRTNMVVTIGVLGTLTTVVTVLSNL
>NZ_CP045851.1|WP_153760584.1|3267494_3267887_-|MmcQ/YjbR-family-DNA-binding-protein
MSDYSDPPAEYVEALRPICLGLPETREETAWAGTRWMVRQRNFAQVLGVDRAGGHHVVLTFRSQGQELQILQQVGHPFYRLGWGRDVLGMVLDDATDWDEVQELVTESYCVLAPKKLVAMVGRPDIPESS
>NZ_CP045851.1|WP_153760583.1|3267014_3267470_-|DUF2087-domain-containing-protein
MSDALVLHTAAEVAEILRMNLQVVQRKLQAGEIPGYRIGREWRVERAQLLAWLERHSNQRDPLDVHFHADGRLRALPTKRGLRREVLERVVARLAPDRTWSEIELNRELRAVHDDVAALRRELVAERLLVRTPDGVYKRRFHGPSLIPLGG
>NZ_CP045851.1|WP_153760582.1|3266585_3266942_-|hypothetical-protein
MSWHPSRASRQPLDPATPSRYRAATVRSRAGRSLLVETADGHDRLLPVPSAPLPSLVGRTVLLANDYDWVVAVEPSDPVEQVQVDGAVTSALRTDRRLENMQARRHRRRVLPFRAEGR
>NZ_CP045851.1|WP_153760581.1|3265169_3266543_-|DNA-repair-protein-RadA
MARSRTVFRCTECGGAAPQWAGRCPACGEWNTLVEEVEAPSAPAARVAPVSTPAPIGEVDPTEWQPRPTGIDELDRVLGGGLVPGSVTLLGGEPGIGKSTLLLQALASLAERHVQVLYVSGEESAQQVRLRAERLGALQPSLWFVAETDLAHVIAHLDQVAPVVCVVDSIQTMTAPDLTSSAGSVAQVRDCAARLTAEAKARGIATILVGHVTKDGGLAGPRVLEHVVDTVVSFEGERHHALRLLRAVKHRFGSTDELGLFEMTEGGLVGLPDPSKLFLADRRAGVSGSIVVPTIEGHRPLLVELQALVTDGGAGSPRRSAQGLDHGRMSFLLAVLQQRAGISVSEHDVYALAVGGVRLVEPAADLALAMAVASARLDMPVPDDLVAIGEVGLGGELRQVGQTGRRLAEAARLGFTTAIVPRSTGDAPPGVRLVRAATLADAVHMGLTAPGPIRRVR
>NZ_CP045851.1|WP_153760580.1|3264086_3265160_-|DNA-integrity-scanning-protein-DisA
MVARHSPASLDALRAIAPGKPLREGLDRILQAGKGALIVIGDGPEVLNICSGGFLLDAAFSPQRLSELAKMDGAIILARDASRIARANVHLVPNPNVPTSETGTRHRTAERVARSIDVPVISVSEDMAVIAVYVGDEKHPLEPTARLLSRANQALQTLERYRSRLDAVSASLSALEVEDLVTLRDVVSVLQRTEMVRRIADEIEIDVIELGVDGRLIMLQLEELLGGVFEDGRQVVRDYFHEGVDWKLAEAMGALAGYDTEELLDLKAIAESLRMPGDGIDLDRSVTPRGYRLLSKVPRLPDAVVDNIVRRFGNLQKIMRATTGDLEEVEGVGAARARAIKEGLTRLAETSILERYS
>NZ_CP045851.1|WP_153761257.1|3263691_3264096_+|MarR-family-transcriptional-regulator
MDQLERELRAEHGLTLADYEILVHLSEAPERRLRMADLADAASVSRSRLTHRVDRMTAQGLVERAPCPTDRRGTFAVLTPAGFSVIEAAAPTHVAGVRRYVVDPLDPAVLDAAGGALGTVAAAIRAAAEEQDQE
>NZ_CP045851.1|WP_153760589.1|3273891_3274623_+|TSUP-family-transporter
MEPWTIVLVGIGALTTSALTAVLGFGGGMVLLALLLIWIDPLVAIPLHAAIQVVSNGTRTVIRRHDVDWPTAARASALLLPAGALAMPLVVRAPAAALQAAIAVTVLAATWVPERTGRELPPPSPRAWLGIGAGIGALNVVVGATGPLQAPFFRAAAPDRLTFVGTFAATQVAGHAAKIALFGAAGFAPTRYAAAAVVGIAGVVAGTHLGSRALDRMPEERFRSLYLAAITAVAAYLLVDAVL
>NZ_CP045851.1|WP_153760590.1|3274619_3275543_-|TIGR03621-family-F420-dependent-LLM-class-oxidoreductase
MAIRVAVQADPQDRAGWLDLARTVEDAGFAGLLVGDHPGSGMAPFVALAAAAAVTERIELGTYVLNAGVWEPLPLASEVATLDHVSGGRAVLGVGAGHTPSEWTTTGREHPPARERVDRMVELVDATQALLGGDPVTHHGPHFTLVDAHLARPPVVRERVPLTVGGAGDRVLRFAAGRADVVGLTGLGRTLADGHSHEVDWSPEAIRRTIDTVRTAAREADRGVALEALVQHVEVTDEAEAAAERLAGGVTGATAEDLVAAPFVWIGTVAEIREQLARWRDELGLERYVVRAPAVDPVTDILHERDL
>NZ_CP045851.1|WP_153760591.1|3275612_3276017_-|hypothetical-protein
MSPRRPRPGIWALVLLGVLLFCSLMLTIVVSMAIWPGEAKLTAPLFCDDARPDAYVVRDTYNVRPGETSMNFTLYCVGKRGDFDEVGWLRPTLALWAGHTVLLVLVAVVPLLIGRMRRGRRAIDEPPPTGSPFV
>NZ_CP045851.1|WP_153760592.1|3276013_3276601_-|hypothetical-protein
MRGSVGRWRGGASAVGAVVLALAVSACVGVTDREDFDALVDARGGGVSSDLALDAIAAVETRVGTDDLEMTSLSINPGNRSVVLTVRDPAARQNLDRYVYRARGGLGEAEPVQVSARDDLDAQSFRSSELTALDDVEGLADAAVAALDLEQASVESIVATVVQGEANLIVAVDSARARGSARFRGDGSLVEASRS
>NZ_CP045851.1|WP_153760593.1|3276612_3278061_-|lysine--tRNA-ligase
MTDSTDPTTPARGHGQPQPFRWDADASAAELIAAHGDLEPGTETERVVTIAGRLMLRRIQGKLGFGTLQDSTGRVQLFAPSATTPDFDAFADLSLGDWIGVRGIVMTTRRGELSVRVDDWTLLAEARRPFPDKWHGITDTDTRYRQRYVDLWVTEEARQTFLLRSRLLSLTRRFLEDRGFIEVETPVLHPIPGGALATPFTTHHNALDQDLFLRIAPELYLKRLTVGGFERVFEIGRVFRNEGISTRHNPEFTMLELYQAYADYTDVMALTEELVAHLATELCGSTSISYQGRDLDLSVPWRRATLDELITEHTGLEISVDTPLEELRGICERYDIPWKDGWGTGKLLLEVYEKTVEHELWGPVFVTDYPTEVSPLSRDHRERRGYTERFEAIVAGRELGNAFSELTDPGEQRSRMQSQADAKAAGDEEAMVVDEDYLRALDYGLPPTGGLGIGIDRLVMLLADVHSIRDVVLFPTLRPEQQ
>NZ_CP045851.1|WP_153760594.1|3278057_3278858_-|type-III-pantothenate-kinase
MLIAIDVGNTNTVIGLYDSSDPTEAATADEGLLDHWRISTDHDRTPDELAVLLGGFLGFRGTHLRDEVQGVAISSGVPRSTATLRAMTKRYFGVEPVVIEPGIRTGVAVAVDNPREVGADRIANSVGAWHLFGGPTVVVDFGTATTCDVISARGEYIGGVIAPGVNISLDALFSRTAALRAVELVEPRNVIGRTTVECIQSGAIFGFAGMVDGLVRRIADELGDCKVIGTGGLSSLVAPYSATIEQIEPWITLHGLRLVHAKNAER
>NZ_CP045851.1|WP_153760595.1|3278857_3279766_-|carboxylating-nicotinate-nucleotide-diphosphorylase
MRLGRRPCGRLVPLMDAFVDPPAGEVRAVVARALAEDLTPLGDVTSMLLDRSRTATGRFVARVEGRLSGGACVSETFHQVDPALVLDWQLADGSEVGPGTLIGTVTGPLASMLTAERTALNLLGHLSGVATLAARFRAAADPSTHVWDTRKTTPGLRSLEKAAVRAGGCVNHRGNLSEWVMLKDNHLVGVGIAEGVARAKAAWPGRTVQVECDRPAQVEEAVAAGADAVLLDNMSVDEAAACIATVRAADPRCLVEISGGITLDTIGPYSRIGADCISVGAITNSAPVLDIGLDITPGEGAP
>NZ_CP045851.1|WP_153760596.1|3279782_3280583_-|DUF2510-domain-containing-protein
MTETNDHATGAWHPDPHGRHELRWWDGQRWTEHVSDGGVTSTDAVDAAAPAGTTSAGPAPVQGAAPAGHILDLPVLVVSQKLKLIELTNEYSVFDQGGQQVGTVRQVGQSAMKKALRLVSSVDQFMTHTLEVTDASGAVVLVLTRPRKLVKSRLQVADGAGTPIGEIVQQNAIGKIRFSLEAGGQTIGSLNAENWRAWNFSIRDAQDQEVARITKTWEGLAKTLFTTADNYAVQIHRPLADPMRQLVVASALCVDTALKQDNRGFN
>NZ_CP045851.1|WP_153760597.1|3280594_3282220_-|FAD-binding-protein
MPDSSLDTHLDLLVVGSGVAGLSAAVRAAGTHGMRVGIVTKGELTQTATRWAQGGVAAVLGGDPDSTDLHLADTLAAGAGLCDVDAVRVLVEEGPSRVNELISFGAAFDLDESGQYLLAREGGHSLPRILHAGGAATGVEVERALVEAVRATATLLHEHTYAVDLVVEGGRCRGVLALEPDGTLVEVRAEHVLLATGGSGQLFSVTTNPPEATADGVAMALRSGVAVADVEFVQFHPTALHHPSMPRPLLSEALRGHGALIRDVRGERFVDELLPRDQVSKAMMSRMLELGVDHCYLDARHLERFAERFPTITTALAAAGLDPGADLLPIAPAAHYHCGGVLTDLDGAASLPGLWAAGEVAASGVHGANRLASNSLLDGMVFGFRCIEAIEAGRDGPRPTGAMRALIAPEGSGPDDQAQGLPGRRLERPVLPIDIPTPSTEHPSDAATLRDEVQAVMTRNAGVVRDVASLTAAASALSSLASRLTRSGPGSTAHLELRNLIEAGAALVEAALAREESRGCHTRSDAPEPDDALLVRFVLGG
>NZ_CP045851.1|WP_153760598.1|3282230_3283100_-|pantoate--beta-alanine-ligase
MIELTTVAELRAHLDAARARGRSVGFVPTMGYLHEGHASLVRAAARDADDVVVSIFVNPLQFAPHEDLDAYPRDLDRDRQLAADAGATVLFVPGVEEMYPEPVATTVSVAGVSAPLEGESRPTHFAGVATVVAKLFNIVGPCRAYFGEKDFQQVAVVRRMAADLSFPVEVVAEPTVREDDGLAMSSRNAYLDDAHRTAAPALHRALAAGAEAIAGGSSPDEARAAMHAVLAAEPLAEVDYLDVVDPTSLESLQSFEAHRGRAVRLVGAARIGQPRLIDNIGATVPAAAD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	389399-389424	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1043629-1043654	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	92104-92129	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP031959	Phaeobacter sp. LSS9 plasmid unnamed3, complete sequence	9418-9443	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1161914-1161939	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	595550-595575	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	82492-82517	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010677	Phaeobacter gallaeciensis strain P75 plasmid pP75_d, complete sequence	13563-13588	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NC_023140	Phaeobacter gallaeciensis DSM 26640 plasmid pGal_D78, complete sequence	13587-13612	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010684	Phaeobacter piscinae strain P14 plasmid pP14_c, complete sequence	13622-13647	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010719	Phaeobacter piscinae strain P18 plasmid pP18_d, complete sequence	13604-13629	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010808	Phaeobacter piscinae strain P23 plasmid pP23_c, complete sequence	13438-13463	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010659	Phaeobacter piscinae strain P71 plasmid pP71_c, complete sequence	13608-13633	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010641	Phaeobacter gallaeciensis strain P73 plasmid pP73_e, complete sequence	13563-13588	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010772	Phaeobacter piscinae strain P13 plasmid pP13_e, complete sequence	13604-13629	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010646	Phaeobacter piscinae strain P36 plasmid pP36_c, complete sequence	13438-13463	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010692	Phaeobacter piscinae strain P42 plasmid pP42_c, complete sequence	13438-13463	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP010592	Phaeobacter gallaeciensis strain P11 plasmid pP11_d, complete sequence	13563-13588	4	0.846
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	KY940711	Bradyrhizobium phage BDU-MI-1, complete genome	120064-120089	4	0.846
NZ_CP045851_3	3.1\|1127582\|27\|NZ_CP045851\|CRISPRCasFinder	1127582-1127608	27	NZ_CP013744	Streptomyces sp. CdTB01 plasmid unnamed, complete sequence	91025-91051	5	0.815
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1506508-1506533	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1506653-1506678	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1506206-1506231	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1506150-1506175	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1002765-1002790	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	840159-840184	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	993758-993783	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	313727-313752	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	308706-308731	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	274943-274968	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	258912-258937	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	488384-488409	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP025188	Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence	110319-110344	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NC_015951	Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence	286496-286521	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_LR134461	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence	7036-7061	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP013462	Burkholderia ubonensis strain MSMB1471WGS plasmid pMSMB1471, complete sequence	4054-4079	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP024582	Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence	317883-317908	5	0.808
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	38993-39018	5	0.808
NZ_CP045851_3	3.1\|1127582\|27\|NZ_CP045851\|CRISPRCasFinder	1127582-1127608	27	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	913703-913729	6	0.778
NZ_CP045851_5	5.1\|1730056\|26\|NZ_CP045851\|CRISPRCasFinder	1730056-1730081	26	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	281087-281112	6	0.769

1. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggatgccgtgccggagccggcc	Protospacer
************.*** *******

2. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgcccgatgccgcgccggagccggcc	Protospacer
**** *********** *******

3. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggagaccgcgcccgagccggca	Protospacer
******* .*************** .

4. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP031959 (Phaeobacter sp. LSS9 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

5. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
ggccggacgtcgcgcccgagccggcg	Protospacer
 ******.*.************** *

6. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggacgtcgcgcccgagccgagc	Protospacer
*******.*.*************.*

7. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
ccccggatgccgcgccccggccggga	Protospacer
* *************** .******.

8. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010677 (Phaeobacter gallaeciensis strain P75 plasmid pP75_d, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

9. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NC_023140 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_D78, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

10. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010684 (Phaeobacter piscinae strain P14 plasmid pP14_c, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

11. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010719 (Phaeobacter piscinae strain P18 plasmid pP18_d, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaagccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

12. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010808 (Phaeobacter piscinae strain P23 plasmid pP23_c, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

13. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010659 (Phaeobacter piscinae strain P71 plasmid pP71_c, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

14. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010641 (Phaeobacter gallaeciensis strain P73 plasmid pP73_e, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

15. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010772 (Phaeobacter piscinae strain P13 plasmid pP13_e, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaagccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

16. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010646 (Phaeobacter piscinae strain P36 plasmid pP36_c, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

17. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010692 (Phaeobacter piscinae strain P42 plasmid pP42_c, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

18. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP010592 (Phaeobacter gallaeciensis strain P11 plasmid pP11_d, complete sequence) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
tgccggaggccgcgaccgagccggtg	Protospacer
.****** ****** ********* *

19. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to KY940711 (Bradyrhizobium phage BDU-MI-1, complete genome) position: , mismatch: 4, identity: 0.846

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggttgccgcggccgagccgcag	Protospacer
****** ******* ******** .*

20. spacer 3.1|1127582|27|NZ_CP045851|CRISPRCasFinder matches to NZ_CP013744 (Streptomyces sp. CdTB01 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

cgccacccgtggcccggctccccgagg	CRISPR spacer
gggcacgcgtggcccggctcgccgaga	Protospacer
 * *** ************* *****.

21. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtacgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

22. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtacgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

23. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtgcgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

24. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtgcgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

25. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtgcgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

26. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtgcgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

27. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gtgcgcatgccgcgcccgagcccggg	Protospacer
   ** **************** ***

28. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
agctggatgccgcgcccgatccggtc	Protospacer
 **.*************** ****

29. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
agctggatgccgcgcccgatccggtc	Protospacer
 **.*************** ****

30. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
gcccgcatggcgcgcccgagccgggt	Protospacer
  *** *** ***************

31. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggaggccgcgcccgagcttgcc	Protospacer
******* *************. *

32. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
agccggatgccgctctcgagccggac	Protospacer
 ************ *.********.

33. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
accagggtgccgcgcccgagccgggt	Protospacer
  * **.******************

34. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NC_015951 (Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggataccccgcccgagccgccc	Protospacer
********.** ***********

35. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_LR134461 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggaggccgcgcccgaggcgccc	Protospacer
******* ************ **

36. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP013462 (Burkholderia ubonensis strain MSMB1471WGS plasmid pMSMB1471, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggacgccgcccccgagccgccc	Protospacer
*******.***** *********

37. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP024582 (Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
accagggtgccgcgcccgagccgggt	Protospacer
  * **.******************

38. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.808

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgccggatgccgcgccagacccgcaa	Protospacer
**************** ** *** ..

39. spacer 3.1|1127582|27|NZ_CP045851|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

cgccacccgtggcccggctccccgagg	CRISPR spacer
accttgccgtggcccggctccgcgagg	Protospacer
  *.  *************** *****

40. spacer 5.1|1730056|26|NZ_CP045851|CRISPRCasFinder matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 6, identity: 0.769

cgccggatgccgcgcccgagccgggg	CRISPR spacer
cgctggatgccgcgcccgagcgctac	Protospacer
***.*****************   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2994753 : 3009939

Streptococcus_phage(40.0%)

integrase,transposase,protease

attL 3006137:3006151|attR 3007927:3007941

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153760353.1\|2994753_2995635_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_153760354.1\|2995631_2996045_-	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
WP_153760355.1\|2996138_2996837_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_153760356.1\|2997130_2997778_-	Vitamin K epoxide reductase	NA	NA	NA	NA
WP_153761234.1\|2997770_2998376_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_153761235.1\|2998559_2998937_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_153760357.1\|2998936_2999875_+	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_153760358.1\|2999942_3001886_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.0e-95	36.3
WP_153760359.1\|3001872_3002241_+	DUF3703 domain-containing protein	NA	NA	NA	NA
WP_153760360.1\|3002237_3002903_+	redoxin family protein	NA	NA	NA	NA
WP_153760361.1\|3002963_3003407_-	hypothetical protein	NA	NA	NA	NA
WP_153760362.1\|3003291_3005034_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.2e-44	28.0
WP_153760363.1\|3005123_3006305_+\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	1.2e-55	37.7
3006137:3006151	attL	NA	NA	NA	NA
WP_153760364.1\|3006250_3007189_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_153760365.1\|3007185_3007503_-\|transposase	transposase	NA	NA	NA	NA
WP_153761236.1\|3007571_3007862_+	hypothetical protein	M1UG82	Synechococcus_phage	4.8e-06	45.2
WP_153760366.1\|3008159_3008462_-	hypothetical protein	NA	NA	NA	NA
3007927:3007941	attR	NA	NA	NA	NA
WP_153758282.1\|3008646_3009939_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	2.3e-47	35.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045851

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection