CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP045788	Shigella dysenteriae strain CFSAN029786 plasmid p4CFSAN029786, complete sequence	0 crisprs	NA	0	0
NZ_CP045784	Shigella dysenteriae strain CFSAN029786 chromosome, complete genome	3 crisprs	csa3,PrimPol,DinG,DEDDh,WYL,c2c9_V-U4,c2c8_V-U2,cas3,cas2	3	24
NZ_CP045787	Shigella dysenteriae strain CFSAN029786 plasmid p3CFSAN029786, complete sequence	0 crisprs	NA	0	0
NZ_CP045785	Shigella dysenteriae strain CFSAN029786 plasmid p1CFSAN029786, complete sequence	0 crisprs	RT	0	4
NZ_CP045786	Shigella dysenteriae strain CFSAN029786 plasmid p2CFSAN029786, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045784_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045784_1

1153279-1153394

Orphan

Consensus_repeat	Method
AACGCCTGATGCGACGCTGACGCGTCTTATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045784_1

>merge|NZ_CP045784|1|1153279-1153394|CRISPRCasFinder
AACGCCTGATGCGACGCTGACGCGTCTTATCTGGCCTACACGCTGCGATTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTCAACGCCTGATGCGACGCTGGCGCGTCTTATC

>NZ_CP045784|1|1|1153279-1153394|CRISPRCasFinder
AACGCCTGATGCGACGCTGACGCGTCTTATC	TGGCCTACACGCTGCGATTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCATTC
AACGCCTGATGCGACGCTGGCGCGTCTTATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045784.1\|WP_000951763.1\|1150045_1151746_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP045784.1\|WP_001200573.1\|1160437_1161253_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP045784.1\|WP_001117037.1\|1156743_1159650_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP045784.1\|WP_000916323.1\|1147167_1147866_+\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NZ_CP045784.1\|WP_000888672.1\|1153458_1154154_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP045784.1\|WP_000800457.1\|1163914_1165201_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP045784.1\|WP_001065381.1\|1166186_1167008_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP045784.1\|WP_000525181.1\|1159661_1160321_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP045784.1\|WP_001148403.1\|1147979_1148744_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP045784.1\|WP_005031838.1\|1144614_1145598_+\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP045784.1\|WP_000746154.1\|1161507_1163862_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP045784.1\|WP_000235693.1\|1145573_1147184_+\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
NZ_CP045784.1\|WP_000610901.1\|1167010_1167388_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP045784.1\|WP_000241244.1\|1165200_1166190_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP045784.1\|WP_001248770.1\|1142575_1142707_-\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NZ_CP045784.1\|WP_000151685.1\|1151756_1153259_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP045784.1\|WP_005039286.1\|1148829_1149708_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP045784.1\|WP_000035676.1\|1154228_1156580_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP045784.1\|WP_005039252.1\|1142795_1144451_+\|DNA-binding-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP045784.1\|WP_000637830.1\|1141391_1142474_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129977

Protein	Function_ID	Function_description	E-value
NZ_CP045784.1\|WP_000951763.1\|1150045_1151746_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP045784.1\|WP_001200573.1\|1160437_1161253_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
NZ_CP045784.1\|WP_001117037.1\|1156743_1159650_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP045784.1\|WP_000916323.1\|1147167_1147866_+\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	1.29253e-164
NZ_CP045784.1\|WP_000888672.1\|1153458_1154154_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	1.7375e-178
NZ_CP045784.1\|WP_000800457.1\|1163914_1165201_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP045784.1\|WP_001065381.1\|1166186_1167008_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
NZ_CP045784.1\|WP_000525181.1\|1159661_1160321_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	4.07749e-158
NZ_CP045784.1\|WP_001148403.1\|1147979_1148744_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.87417e-49
NZ_CP045784.1\|WP_005031838.1\|1144614_1145598_+\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP045784.1\|WP_000746154.1\|1161507_1163862_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP045784.1\|WP_000235693.1\|1145573_1147184_+\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NZ_CP045784.1\|WP_000610901.1\|1167010_1167388_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NZ_CP045784.1\|WP_000241244.1\|1165200_1166190_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP045784.1\|WP_001248770.1\|1142575_1142707_-\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
NZ_CP045784.1\|WP_000151685.1\|1151756_1153259_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP045784.1\|WP_005039286.1\|1148829_1149708_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP045784.1\|WP_000035676.1\|1154228_1156580_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP045784.1\|WP_005039252.1\|1142795_1144451_+\|DNA-binding-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP045784.1\|WP_000637830.1\|1141391_1142474_-\|MFS-transporter	gnl\|CDD\|129977	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.62285e-156

>NZ_CP045784.1|WP_000151685.1|1151756_1153259_+|L-arabinose-isomerase
MTIFDNYDVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>NZ_CP045784.1|WP_000951763.1|1150045_1151746_+|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSLEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
>NZ_CP045784.1|WP_005039286.1|1148829_1149708_-|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFVNTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>NZ_CP045784.1|WP_001148403.1|1147979_1148744_-|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
>NZ_CP045784.1|WP_000916323.1|1147167_1147866_+|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELLSGKASASAILGITG
>NZ_CP045784.1|WP_000235693.1|1145573_1147184_+|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPDEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLQQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>NZ_CP045784.1|WP_005031838.1|1144614_1145598_+|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVQFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISGWQRAVSR
>NZ_CP045784.1|WP_005039252.1|1142795_1144451_+|DNA-binding-transcriptional-regulator-SgrR
MSSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>NZ_CP045784.1|WP_001248770.1|1142575_1142707_-|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>NZ_CP045784.1|WP_000637830.1|1141391_1142474_-|MFS-transporter
MIWIMTMARRMNGVYAAFMLVAFMIGGAGALQAPTLSLFLSREVGAQPFWIGLFYTVNTIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNAPLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV
>NZ_CP045784.1|WP_000888672.1|1153458_1154154_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQSGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMEIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP045784.1|WP_000035676.1|1154228_1156580_+|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKNCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NZ_CP045784.1|WP_001117037.1|1156743_1159650_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKMVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLLDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NZ_CP045784.1|WP_000525181.1|1159661_1160321_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAPDNTARVVLKPITGRSHQLRVHMLAQGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>NZ_CP045784.1|WP_001200573.1|1160437_1161253_-|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NZ_CP045784.1|WP_000746154.1|1161507_1163862_+|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVEHFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>NZ_CP045784.1|WP_000800457.1|1163914_1165201_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>NZ_CP045784.1|WP_000241244.1|1165200_1166190_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NZ_CP045784.1|WP_001065381.1|1166186_1167008_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>NZ_CP045784.1|WP_000610901.1|1167010_1167388_+|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH

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Crispr_ID: NZ_CP045784_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045784_2

1235710-1235858

Orphan

Consensus_repeat	Method
TGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045784_2

>merge|NZ_CP045784|2|1235710-1235858|CRISPRCasFinder
TGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTATGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTATGCGCC

>NZ_CP045784|2|2|1235710-1235858|CRISPRCasFinder
TGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCC	AACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTATGGTTCGGCACAAACC
TGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTATGCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045784.1\|WP_000816471.1\|1228335_1229559_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP045784.1\|WP_000105858.1\|1226064_1227081_+\|lipoate--protein-ligase-LplA	unknown	unknown	gnl\|CDD\|179655
NZ_CP045784.1\|WP_005025109.1\|1236667_1237741_-\|patatin-family-protein	unknown	unknown	gnl\|CDD\|227013
NZ_CP045784.1\|WP_000175943.1\|1239148_1240738_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP045784.1\|WP_000204018.1\|1241935_1242349_-\|DNA-polymerase-III-subunit-psi	unknown	unknown	gnl\|CDD\|180735
NZ_CP045784.1\|WP_001092469.1\|1241520_1241967_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|181904
NZ_CP045784.1\|WP_001029698.1\|1222887_1224270_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|273067
NZ_CP045784.1\|WP_094096485.1\|1232320_1233468_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP045784.1\|WP_000563087.1\|1235888_1236671_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|171118
NZ_CP045784.1\|WP_001132955.1\|1224318_1225287_-\|phosphoserine-phosphatase	unknown	unknown	gnl\|CDD\|182988
NZ_CP045784.1\|WP_001365356.1\|1231059_1231839_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NZ_CP045784.1\|WP_000870696.1\|1240810_1241506_-\|pyrimidine-5'-nucleotidase	unknown	unknown	gnl\|CDD\|181865
NZ_CP045784.1\|WP_000124627.1\|1225392_1226037_+\|YtjB-family-periplasmic-protein	unknown	unknown	gnl\|CDD\|236885
NZ_CP045784.1\|WP_005025113.1\|1238150_1238756_-\|molecular-chaperone-OsmY	unknown	unknown	gnl\|CDD\|182556
NZ_CP045784.1\|WP_000490275.1\|1237862_1238024_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP045784.1\|WP_000566153.1\|1227112_1227262_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045784.1\|WP_001403902.1\|1244111_1244348_-\|DUF1435-domain-containing-protein	unknown	unknown	gnl\|CDD\|369291
NZ_CP045784.1\|WP_001272343.1\|1242451_1243483_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	unknown	unknown	gnl\|CDD\|181902
NZ_CP045784.1\|WP_000224877.1\|1227536_1228256_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP045784.1\|WP_000477790.1\|1229610_1230933_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276

Protein	Function_ID	Function_description	E-value
NZ_CP045784.1\|WP_000816471.1\|1228335_1229559_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP045784.1\|WP_000105858.1\|1226064_1227081_+\|lipoate--protein-ligase-LplA	gnl\|CDD\|179655	PRK03822, lplA, lipoate-protein ligase A; Provisional.	0
NZ_CP045784.1\|WP_005025109.1\|1236667_1237741_-\|patatin-family-protein	gnl\|CDD\|227013	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	2.77135e-167
NZ_CP045784.1\|WP_000175943.1\|1239148_1240738_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP045784.1\|WP_000204018.1\|1241935_1242349_-\|DNA-polymerase-III-subunit-psi	gnl\|CDD\|180735	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated.	5.48557e-70
NZ_CP045784.1\|WP_001092469.1\|1241520_1241967_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	gnl\|CDD\|181904	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional.	3.46751e-110
NZ_CP045784.1\|WP_001029698.1\|1222887_1224270_-\|DNA-repair-protein-RadA	gnl\|CDD\|273067	TIGR00416, DNA_repair_protein_RadA_homolog, DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus (SP:P45266) and in Listeria monocytogenes (SP:Q48761) . for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP045784.1\|WP_094096485.1\|1232320_1233468_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.90611e-146
NZ_CP045784.1\|WP_000563087.1\|1235888_1236671_-\|metal-dependent-hydrolase	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	7.45308e-177
NZ_CP045784.1\|WP_001132955.1\|1224318_1225287_-\|phosphoserine-phosphatase	gnl\|CDD\|182988	PRK11133, serB, phosphoserine phosphatase; Provisional.	0
NZ_CP045784.1\|WP_001365356.1\|1231059_1231839_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NZ_CP045784.1\|WP_000124627.1\|1225392_1226037_+\|YtjB-family-periplasmic-protein	gnl\|CDD\|236885	PRK11246, PRK11246, YtjB family periplasmic protein.	3.42178e-147
NZ_CP045784.1\|WP_005025113.1\|1238150_1238756_-\|molecular-chaperone-OsmY	gnl\|CDD\|182556	PRK10568, PRK10568, molecular chaperone OsmY.	2.76492e-102
NZ_CP045784.1\|WP_000870696.1\|1240810_1241506_-\|pyrimidine-5'-nucleotidase	gnl\|CDD\|181865	PRK09449, PRK09449, dUMP phosphatase; Provisional.	4.97676e-172
NZ_CP045784.1\|WP_000490275.1\|1237862_1238024_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	4.97087e-08
NZ_CP045784.1\|WP_001403902.1\|1244111_1244348_-\|DUF1435-domain-containing-protein	gnl\|CDD\|369291	pfam07256, DUF1435, Protein of unknown function (DUF1435). This family consists of several hypothetical Enterobacterial proteins of around 80 residues in length. The function of this family is unknown.	1.11074e-25
NZ_CP045784.1\|WP_001272343.1\|1242451_1243483_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	gnl\|CDD\|181902	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC.	0
NZ_CP045784.1\|WP_000224877.1\|1227536_1228256_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	4.60382e-172
NZ_CP045784.1\|WP_000477790.1\|1229610_1230933_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0

>NZ_CP045784.1|WP_094096485.1|1232320_1233468_-|IS3-family-transposase
MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEIFKKGYRALDVRLPEQFSIIGKLRAHYPVVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTCIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESEPFARKRA
>NZ_CP045784.1|WP_001365356.1|1231059_1231839_-|deoxyribose-phosphate-aldolase
MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQTKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY
>NZ_CP045784.1|WP_000477790.1|1229610_1230933_-|thymidine-phosphorylase
MFLAQEIIRKKRDGHALNDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE
>NZ_CP045784.1|WP_000816471.1|1228335_1229559_-|phosphopentomutase
MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF
>NZ_CP045784.1|WP_000224877.1|1227536_1228256_-|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
>NZ_CP045784.1|WP_000566153.1|1227112_1227262_+|hypothetical-protein
MIDLENQEREIINLMLSQRISWLAAVRIRHKLSLAEVSKMLGISINSLK
>NZ_CP045784.1|WP_000105858.1|1226064_1227081_+|lipoate--protein-ligase-LplA
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEAEIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIAGAVR
>NZ_CP045784.1|WP_000124627.1|1225392_1226037_+|YtjB-family-periplasmic-protein
MARTKLKFRLHRAVIVLFCLALLVALMQGTSWFSQNHQRQRNPQLEELTRPLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTLWQQSPFLLTASKPVPEEEESEKKE
>NZ_CP045784.1|WP_001132955.1|1224318_1225287_-|phosphoserine-phosphatase
MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK
>NZ_CP045784.1|WP_001029698.1|1222887_1224270_-|DNA-repair-protein-RadA
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
>NZ_CP045784.1|WP_000563087.1|1235888_1236671_-|metal-dependent-hydrolase
MICRFIDTHCHFDFPPFSGDEEASLQRVAQAGVGKIIVPATEAENFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDLFGDDPQLERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG
>NZ_CP045784.1|WP_005025109.1|1236667_1237741_-|patatin-family-protein
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGNLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVIDAPQANDPTFNNEDLA
>NZ_CP045784.1|WP_000490275.1|1237862_1238024_-|DUF1328-domain-containing-protein
MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP
>NZ_CP045784.1|WP_005025113.1|1238150_1238756_-|molecular-chaperone-OsmY
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTEQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>NZ_CP045784.1|WP_000175943.1|1239148_1240738_-|peptide-chain-release-factor-3
MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVSRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH
>NZ_CP045784.1|WP_000870696.1|1240810_1241506_-|pyrimidine-5'-nucleotidase
MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGIAKPNKKIFDYALELAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKHRLPPPR
>NZ_CP045784.1|WP_001092469.1|1241520_1241967_-|ribosomal-protein-S18-alanine-N-acetyltransferase
MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIVVDPDYQRQGLGRVLLKHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM
>NZ_CP045784.1|WP_000204018.1|1241935_1242349_-|DNA-polymerase-III-subunit-psi
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAALWQQICTYEHDFFPRND
>NZ_CP045784.1|WP_001272343.1|1242451_1243483_+|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLNAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG
>NZ_CP045784.1|WP_001403902.1|1244111_1244348_-|DUF1435-domain-containing-protein
MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTPVMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045784_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045784_3

4320107-4320230

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045784_3

>merge|NZ_CP045784|3|4320107-4320230|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP045784|3|3|4320107-4320230|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045784.1\|WP_000269501.1\|4326873_4327806_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP045784.1\|WP_001174933.1\|4321841_4323215_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP045784.1\|WP_000493947.1\|4323429_4324071_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP045784.1\|WP_000212657.1\|4319677_4319983_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP045784.1\|WP_000102278.1\|4329126_4329216_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP045784.1\|WP_032335688.1\|4318461_4318644_-\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP045784.1\|WP_001182329.1\|4325549_4326761_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP045784.1\|WP_000190982.1\|4327802_4328828_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP045784.1\|WP_000534291.1\|4320544_4321801_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP045784.1\|WP_000007283.1\|4330696_4331278_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP045784.1\|WP_000701024.1\|4329381_4330551_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP045784.1\|WP_000817086.1\|4312600_4313605_+\|L,D-transpeptidase-LdtE	unknown	unknown	gnl\|CDD\|182294
NZ_CP045784.1\|WP_000144559.1\|4310802_4312023_+\|cysteine-desulfurase-SufS	unknown	unknown	gnl\|CDD\|181766
NZ_CP045784.1\|WP_001196526.1\|4312035_4312452_+\|cysteine-desulfuration-protein-SufE	unknown	unknown	gnl\|CDD\|181767
NZ_CP045784.1\|WP_000098888.1\|4324110_4325259_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP045784.1\|WP_001295403.1\|4314215_4315628_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP045784.1\|WP_000907993.1\|4309534_4310806_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|236804
NZ_CP045784.1\|WP_001070230.1\|4317379_4318006_-\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP045784.1\|WP_073817080.1\|4316185_4316245_+\|DUF2767-family-protein	unknown	unknown	gnl\|CDD\|182359
NZ_CP045784.1\|WP_000648420.1\|4313668_4313905_-\|murein-lipoprotein-Lpp	unknown	unknown	gnl\|CDD\|185294

Protein	Function_ID	Function_description	E-value
NZ_CP045784.1\|WP_000269501.1\|4326873_4327806_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP045784.1\|WP_001174933.1\|4321841_4323215_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP045784.1\|WP_000493947.1\|4323429_4324071_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP045784.1\|WP_000212657.1\|4319677_4319983_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP045784.1\|WP_032335688.1\|4318461_4318644_-\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	1.31551e-26
NZ_CP045784.1\|WP_001182329.1\|4325549_4326761_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP045784.1\|WP_000190982.1\|4327802_4328828_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP045784.1\|WP_000534291.1\|4320544_4321801_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP045784.1\|WP_000007283.1\|4330696_4331278_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP045784.1\|WP_000701024.1\|4329381_4330551_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	7.82925e-98
NZ_CP045784.1\|WP_000817086.1\|4312600_4313605_+\|L,D-transpeptidase-LdtE	gnl\|CDD\|182294	PRK10190, PRK10190, L,D-transpeptidase; Provisional.	1.41216e-83
NZ_CP045784.1\|WP_000144559.1\|4310802_4312023_+\|cysteine-desulfurase-SufS	gnl\|CDD\|181766	PRK09295, PRK09295, cysteine desulfurase SufS.	0
NZ_CP045784.1\|WP_001196526.1\|4312035_4312452_+\|cysteine-desulfuration-protein-SufE	gnl\|CDD\|181767	PRK09296, PRK09296, cysteine desulfuration protein SufE.	7.78822e-104
NZ_CP045784.1\|WP_000098888.1\|4324110_4325259_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP045784.1\|WP_001295403.1\|4314215_4315628_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP045784.1\|WP_000907993.1\|4309534_4310806_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|236804	PRK10948, PRK10948, Fe-S cluster assembly protein SufD.	0
NZ_CP045784.1\|WP_001070230.1\|4317379_4318006_-\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP045784.1\|WP_073817080.1\|4316185_4316245_+\|DUF2767-family-protein	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	5.42889e-06
NZ_CP045784.1\|WP_000648420.1\|4313668_4313905_-\|murein-lipoprotein-Lpp	gnl\|CDD\|185294	PRK15396, PRK15396, major outer membrane lipoprotein.	2.83509e-37

>NZ_CP045784.1|WP_000212657.1|4319677_4319983_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP045784.1|WP_032335688.1|4318461_4318644_-|fumarate-hydratase-FumD
MSWSHYRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELDKQAMETVINALVK
>NZ_CP045784.1|WP_001070230.1|4317379_4318006_-|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP045784.1|WP_073817080.1|4316185_4316245_+|DUF2767-family-protein
MGNRTKEDELYREMCRVVG
>NZ_CP045784.1|WP_001295403.1|4314215_4315628_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP045784.1|WP_000648420.1|4313668_4313905_-|murein-lipoprotein-Lpp
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
>NZ_CP045784.1|WP_000817086.1|4312600_4313605_+|L,D-transpeptidase-LdtE
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLLPVVPAGPNNPLGRYALRFAHGNGEYLIHGTSAPDCVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRARQ
>NZ_CP045784.1|WP_001196526.1|4312035_4312452_+|cysteine-desulfuration-protein-SufE
MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSPQNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS
>NZ_CP045784.1|WP_000144559.1|4310802_4312023_+|cysteine-desulfurase-SufS
MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTLFDEKTRLLAITHVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSVLGLNNIAVYELNLMHYALSQLESVPNLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG
>NZ_CP045784.1|WP_000907993.1|4309534_4310806_+|Fe-S-cluster-assembly-protein-SufD
MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDAFALTLDAVRLVFVDGRYVPALSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMYITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRNNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDEGLKQQVLARIGQRLPGGAR
>NZ_CP045784.1|WP_000534291.1|4320544_4321801_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP045784.1|WP_001174933.1|4321841_4323215_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAAGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>NZ_CP045784.1|WP_000493947.1|4323429_4324071_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP045784.1|WP_000098888.1|4324110_4325259_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSMVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP045784.1|WP_001182329.1|4325549_4326761_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKGFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAVQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKAGNNSQDGLTFTDLLRSKTYRANVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRSEEAGCQNHGNAEVAHSESH
>NZ_CP045784.1|WP_000269501.1|4326873_4327806_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP045784.1|WP_000190982.1|4327802_4328828_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP045784.1|WP_000102278.1|4329126_4329216_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP045784.1|WP_000701024.1|4329381_4330551_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVEPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYPGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP045784.1|WP_000007283.1|4330696_4331278_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045784_1	1.1\|1153310\|54\|NZ_CP045784\|CRISPRCasFinder	1153310-1153363	54	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165411-165464	1	0.981
NZ_CP045784_3	3.1\|4320150\|38\|NZ_CP045784\|CRISPRCasFinder	4320150-4320187	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229187-229239	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229288-229340	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239681-239733	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239782-239834	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230593-230645	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230694-230746	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211563-211615	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211664-211716	9	0.83
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7435-7487	10	0.811
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84259-84311	10	0.811
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229389-229441	10	0.811
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239883-239935	10	0.811
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230795-230847	10	0.811
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211765-211817	10	0.811
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229086-229138	11	0.792
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239580-239632	11	0.792
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230492-230544	11	0.792
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211462-211514	11	0.792
NZ_CP045784_1	1.1\|1153310\|54\|NZ_CP045784\|CRISPRCasFinder	1153310-1153363	54	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	72431-72484	12	0.778
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27384-27436	12	0.774
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	106-158	13	0.755
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33062-33114	13	0.755
NZ_CP045784_2	2.1\|1235758\|53\|NZ_CP045784\|CRISPRCasFinder	1235758-1235810	53	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141009-141061	13	0.755

1. spacer 1.1|1153310|54|NZ_CP045784|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

tggcctacacgctgcgattttgtaggccggataagcaaagcgcatccggcattc	CRISPR spacer
tggcctacacgctgcgattttgtaggccggataagcaaagcgcatccggcattg	Protospacer
*****************************************************

2. spacer 3.1|4320150|38|NZ_CP045784|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.************************************.** * * **. .**.

4. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc-	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacgggt-ggcgcgagaat	Protospacer
.************************************.** * ***.*.*.

5. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.************************************.** * * **. .**.

6. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc-	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacgggt-ggcgcgagaat	Protospacer
.************************************.** * ***.*.*.

7. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.************************************.** * * **. .**.

8. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc-	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacgggt-ggcgcgagaat	Protospacer
.************************************.** * ***.*.*.

9. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.************************************.** * * **. .**.

10. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.83

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc-	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacgggt-ggcgcgagaat	Protospacer
.************************************.** * ***.*.*.

11. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.811

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
aattgccggatgcggcgtgaacgccttatccggcctacggttgagtgcagttt	Protospacer
**.**********************************.**** .*..**. ..

12. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.811

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
aattgccggatgcggcgtgaacgccttatccggcctacggttgagtgcagttt	Protospacer
**.**********************************.**** .*..**. ..

13. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.811

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtaaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.*****************.******************.** * * **. .**.

14. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.811

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtaaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.*****************.******************.** * * **. .**.

15. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.811

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtaaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.*****************.******************.** * * **. .**.

16. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.811

aactgccggatgcggcgtgaacgccttatccggcctatggttcg-gcacaaacc	CRISPR spacer
gactgccggatgcggcgtaaacgccttatccggcctacggatggcgcgggaat-	Protospacer
.*****************.******************.** * * **. .**.

17. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.792

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgtgagaat	Protospacer
.************************************.** * *    *.* .

18. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.792

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgtgagaat	Protospacer
.************************************.** * *    *.* .

19. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.792

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgtgagaat	Protospacer
.************************************.** * *    *.* .

20. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.792

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
gactgccggatgcggcgtgaacgccttatccggcctacggatggcgtgagaat	Protospacer
.************************************.** * *    *.* .

21. spacer 1.1|1153310|54|NZ_CP045784|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

tggcctacacgct-----gcgattttgtaggccggataagcaaagcgcatccggcattc	CRISPR spacer
-----tacaaattaattcgcggtattgtaggccggataagcaaagcgcatccggcagta	Protospacer
     **** ..*     ***.* ******************************** *

22. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.774

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
aaccgccggatgcggcgtgaacgccttatccggcctacgggtgagtgcggttt	Protospacer
***.*********************************.** * .*..*.. ..

23. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.755

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc	CRISPR spacer
gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctcggg	Protospacer
.*..**************************** ****.***** *..*  .

24. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 13, identity: 0.755

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc-------	CRISPR spacer
ctttgccggatgcggcgtgaacgcctgatccggcctacggt-------aagcctgattag	Protospacer
  .*********************** **********.***       **.**

25. spacer 2.1|1235758|53|NZ_CP045784|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 13, identity: 0.755

aactgccggatgcggcgtgaacgccttatccggcctatggttcggcacaaacc-------	CRISPR spacer
ctttgccggatgcggcgtgaacgcctgatccggcctacggt-------aagcctgattag	Protospacer
  .*********************** **********.***       **.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

726 : 7546

Enterobacteria_phage(37.5%)

integrase,holin,lysis,transposase

attL 1606:1620|attR 12788:12802

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032207510.1\|726_1194_-\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	1.3e-69	88.4
WP_001151823.1\|1342_1525_-	hypothetical protein	NA	NA	NA	NA
1606:1620	attL	NA	NA	NA	NA
WP_001092844.1\|1681_2215_-	lysozyme	Q6H9V6	Enterobacteria_phage	1.6e-100	96.0
WP_000731267.1\|2265_2610_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	7.2e-57	97.4
WP_005042508.1\|2614_2830_-\|holin	class II holin family protein	G9L6J5	Escherichia_phage	4.5e-33	98.6
WP_162281787.1\|2906_3254_-	DUF826 domain-containing protein	E7DYV2	Enterobacteria_phage	6.6e-26	80.7
WP_000111980.1\|3497_4022_-	hypothetical protein	A0A0N7CGH9	Escherichia_phage	1.9e-32	42.9
WP_044325913.1\|4913_5123_+	hypothetical protein	NA	NA	NA	NA
WP_171769597.1\|5578_6806_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.2e-176	98.7
WP_024259622.1\|6781_7546_+\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	7.1e-65	50.8
12788:12802	attR	NA	NA	NA	NA

DBSCAN-SWA_2

234121 : 289067

Shigella_phage(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088895425.1\|234121_235349_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000109297.1\|235679_236828_-	MFS transporter	NA	NA	NA	NA
WP_094096743.1\|238350_239518_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.4e-182	99.0
WP_000213098.1\|239524_240142_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_046891701.1\|240152_242597_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.6e-219	49.7
WP_000886683.1\|242835_244128_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000067768.1\|244218_245562_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	8.1e-80	40.6
WP_001295343.1\|245572_246184_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000077089.1\|246338_250367_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_000228475.1\|250501_250996_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000537418.1\|251540_252506_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	8.5e-63	44.6
WP_001043614.1\|252628_254395_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	5.4e-23	24.3
WP_001202167.1\|254395_256117_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.4e-20	25.2
WP_001241678.1\|256158_256863_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|257147_257366_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_001179707.1\|258419_259424_-\|transposase	IS110-like element ISSfl8 family transposase	NA	NA	NA	NA
WP_000839282.1\|260140_260338_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000976828.1\|260349_260841_-	hypothetical protein	NA	NA	NA	NA
WP_000854917.1\|260837_261212_-	toxin	NA	NA	NA	NA
WP_001280958.1\|261258_261633_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_001220314.1\|261795_262017_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	3.2e-10	44.4
WP_005011624.1\|262079_262556_-	RadC family protein	NA	NA	NA	NA
WP_005011597.1\|262571_263045_-	antirestriction protein	A9J566	Pseudomonas_phage	1.9e-12	30.5
WP_001234584.1\|263386_264208_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	7.2e-47	38.3
WP_000088744.1\|264307_264481_-	DUF905 family protein	NA	NA	NA	NA
WP_077515298.1\|264600_265050_-	hypothetical protein	NA	NA	NA	NA
WP_000021107.1\|265958_267029_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_000203522.1\|267025_267931_-	chemotaxis protein	NA	NA	NA	NA
WP_000544701.1\|267927_270312_-	dynamin family protein	NA	NA	NA	NA
WP_001069775.1\|270529_271402_-	GTPase family protein	NA	NA	NA	NA
WP_000282124.1\|271732_271915_+	hypothetical protein	NA	NA	NA	NA
WP_171769599.1\|272020_273249_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000422755.1\|273550_273976_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	7.5e-48	97.9
WP_000290499.1\|275093_275606_-	colibactin self-protection protein ClbS	NA	NA	NA	NA
WP_000151891.1\|275640_275922_-	hypothetical protein	NA	NA	NA	NA
WP_167701220.1\|275967_277130_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.6e-167	98.3
WP_000705119.1\|278376_279489_+	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.3e-27	26.0
WP_001139133.1\|279560_280928_+	MFS transporter	NA	NA	NA	NA
WP_000435415.1\|281563_281983_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-36	77.3
WP_000624671.1\|281979_282330_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_001072392.1\|282360_283953_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.8e-172	61.2
WP_000624715.1\|284486_284777_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.9e-34	66.7
WP_000422761.1\|284773_285199_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.6e-42	87.6
WP_046891699.1\|286198_286843_-	hypothetical protein	NA	NA	NA	NA
WP_000226519.1\|286863_287133_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000502842.1\|287211_287850_-	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	1.9e-55	52.5
WP_001285504.1\|287834_289067_-	phosphoadenosine phosphosulfate reductase	A0A068F1U8	Mycobacterium_phage	5.0e-60	32.9

DBSCAN-SWA_3

305754 : 336174

Salmonella_phage(18.18%)

protease,integrase,holin,transposase

attL 306480:306493|attR 338122:338135

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001138064.1\|305754_308721_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
306480:306493	attL	NA	NA	NA	NA
WP_000147567.1\|308723_309284_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|309409_309760_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|309962_310976_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001334766.1\|311185_312016_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_001209508.1\|312128_312920_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_001300030.1\|314262_315213_+	virulence factor VirK	NA	NA	NA	NA
WP_001411475.1\|315277_316222_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_000088352.1\|316402_317542_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.3e-67	44.7
WP_001293435.1\|317695_319693_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	7.4e-21	25.9
WP_000625669.1\|319755_321033_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_085949416.1\|321312_322475_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.0e-50	40.2
WP_000145481.1\|322541_322760_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_049828170.1\|322810_323200_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.9e-61	99.2
WP_165770242.1\|323278_324491_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-169	100.0
WP_042196155.1\|325666_325873_-	helicase	NA	NA	NA	NA
WP_000282110.1\|325979_326543_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_001258873.1\|327917_329753_-	hypothetical protein	NA	NA	NA	NA
WP_000070931.1\|329853_330141_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_005067490.1\|330112_331642_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000279879.1\|331811_333029_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	1.7e-44	34.4
WP_000934041.1\|333546_335823_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_000520781.1\|335853_336174_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
338122:338135	attR	NA	NA	NA	NA

DBSCAN-SWA_4

372570 : 399917

Salmonella_phage(79.17%)

tail,capsid,transposase,lysis,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000980402.1\|372570_373056_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.3e-67	81.9
WP_000763310.1\|376123_376243_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.4e-12	87.2
WP_001281016.1\|376257_376560_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	8.2e-41	90.0
WP_001207660.1\|376614_377130_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_000046144.1\|377139_378312_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.7e-203	90.0
WP_000905012.1\|378454_379021_-	recombinase family protein	A0A1S6L009	Salmonella_phage	3.2e-86	84.2
WP_000983057.1\|379048_379585_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	3.1e-99	97.2
WP_000829134.1\|380343_380745_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	5.1e-54	85.5
WP_001039925.1\|380737_381169_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	2.2e-71	93.0
WP_001442125.1\|381264_381693_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	3.8e-47	77.3
WP_000727844.1\|381689_382067_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.4e-16	40.8
WP_001069905.1\|382068_382581_-	lysozyme	E5G6N1	Salmonella_phage	3.1e-88	92.3
WP_000171568.1\|382561_382777_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_000868179.1\|382780_382984_-\|tail	tail protein X	E5G6M9	Salmonella_phage	4.0e-31	91.0
WP_000059202.1\|383525_384176_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	1.6e-110	95.4
WP_000742516.1\|384179_385238_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.9e-180	93.1
WP_000216257.1\|385254_386088_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.2e-123	91.3
WP_001098464.1\|386230_387997_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	98.5
WP_004982020.1\|389135_390017_-	hypothetical protein	NA	NA	NA	NA
WP_000960487.1\|390000_391650_-	AAA family ATPase	NA	NA	NA	NA
WP_001217575.1\|391942_392176_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|392186_392375_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_000099181.1\|393463_395002_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|395050_395398_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|395394_395775_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_024181292.1\|399818_399917_-\|transposase	IS3 family transposase	Q716C1	Shigella_phage	8.0e-06	100.0

DBSCAN-SWA_5

499816 : 565594

Stx2-converting_phage(24.44%)

integrase,holin,transposase,tail

attL 498949:499008|attR 529692:532135

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
498949:499008	attL	NA	NA	NA	NA
WP_000099181.1\|499816_501355_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000784361.1\|501480_501861_-	hypothetical protein	NA	NA	NA	NA
WP_001109196.1\|502176_503229_+	3-deoxy-7-phosphoheptulonate synthase AroG	A0A2I6UFP9	Klebsiella_phage	3.4e-81	49.4
WP_001295305.1\|503386_504139_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_000931389.1\|504340_505381_-	galactose-1-epimerase	NA	NA	NA	NA
WP_000053437.1\|505374_506523_-	galactokinase	NA	NA	NA	NA
WP_000191538.1\|506526_507573_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_001265437.1\|507582_508599_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.0e-79	46.0
WP_000096885.1\|508859_510332_-	molybdate ABC transporter ATP-binding protein ModF	A0A1M7XV31	Cedratvirus	1.2e-12	28.3
WP_001147440.1\|510399_511188_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
WP_000891515.1\|511316_511466_+	multidrug efflux pump accessory protein AcrZ	NA	NA	NA	NA
WP_000102000.1\|511631_512405_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000604034.1\|512404_513094_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_000891687.1\|513096_514155_+	molybdenum ABC transporter ATP-binding protein ModC	G9BWD6	Planktothrix_phage	2.6e-20	35.7
WP_005040312.1\|514155_514974_-	bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphatase	NA	NA	NA	NA
WP_024259580.1\|515209_515896_-\|integrase	tyrosine-type recombinase/integrase	K7PHK0	Enterobacteria_phage	6.7e-46	46.6
WP_094096507.1\|515825_516994_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_000702027.1\|517238_517661_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.8e-70	95.7
WP_000787424.1\|517949_518357_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.7e-28	49.6
WP_000379550.1\|518559_518712_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.5e-08	57.4
WP_000435415.1\|520457_520877_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-36	77.3
WP_046891694.1\|520873_521224_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.1e-39	64.7
WP_001333468.1\|521342_521723_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|521719_522067_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000099181.1\|522115_523654_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_094096743.1\|524228_525396_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.4e-182	99.0
WP_000839570.1\|526141_526357_+\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	1.0e-32	95.8
WP_000259035.1\|527095_527434_+	hypothetical protein	H9C0V9	Aeromonas_phage	3.8e-10	41.2
WP_000537609.1\|527439_527895_+	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	3.3e-17	44.6
WP_000247612.1\|527888_528473_+	hypothetical protein	H9C0W2	Aeromonas_phage	5.2e-15	30.6
WP_001009072.1\|528469_528835_+	hypothetical protein	A0A077KAW7	Edwardsiella_phage	6.7e-21	39.7
WP_001139093.1\|528819_529365_+	hypothetical protein	NA	NA	NA	NA
WP_001122284.1\|529345_529711_+	DUF3383 family protein	A0A077KGV4	Edwardsiella_phage	1.8e-21	50.0
WP_001333468.1\|529786_530167_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|530163_530511_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000099181.1\|530559_532098_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000016416.1\|533279_533471_+	hypothetical protein	Q2NPD1	Xanthomonas_phage	1.7e-07	52.9
529692:532135	attR	NA	NA	NA	NA
WP_000101350.1\|534500_534905_+	hypothetical protein	H9C0W7	Aeromonas_phage	3.1e-19	47.9
WP_000228829.1\|534946_535129_+	hypothetical protein	NA	NA	NA	NA
WP_000079879.1\|535112_537134_+	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	4.0e-46	68.1
WP_000010338.1\|537130_537841_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.2e-21	32.8
WP_000890114.1\|537840_538143_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	1.6e-23	48.0
WP_000122177.1\|538139_539009_+	hypothetical protein	NA	NA	NA	NA
WP_000068495.1\|538989_539667_+	hypothetical protein	A0A077KAY0	Edwardsiella_phage	2.8e-28	34.1
WP_001191863.1\|539679_540036_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	2.1e-19	48.1
WP_005028613.1\|540032_540485_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.2e-35	63.1
WP_005043481.1\|540487_541270_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.1e-52	43.6
WP_088895425.1\|541567_542796_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000012213.1\|542859_543213_+	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	1.3e-16	45.0
WP_077897081.1\|544063_544585_+\|tail	phage tail protein	Q7Y4D4	Escherichia_virus	3.6e-44	56.0
WP_153933088.1\|544883_545582_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	1.7e-126	93.5
WP_153933089.1\|545934_547347_+\|tail	prophage tail fiber N-terminal domain-containing protein	Q8W611	Enterobacteria_phage	2.4e-74	51.3
WP_000099181.1\|547750_549289_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|549337_549685_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|549681_550062_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000951300.1\|550187_551129_+	CDF family zinc transporter ZitB	A0A1V0SED0	Indivirus	1.7e-23	28.2
WP_000345414.1\|551125_551845_-	nicotinamide riboside transporter PnuC	A0A126HGA3	Vibrio_phage	5.4e-22	32.7
WP_000115275.1\|551882_552926_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_000097580.1\|554096_554888_-	cell division protein CpoB	NA	NA	NA	NA
WP_001295306.1\|554897_555419_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_005031646.1\|555453_556746_-	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_000030650.1\|556878_558033_-	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_000090104.1\|558097_558526_-	colicin uptake protein TolR	NA	NA	NA	NA
WP_000131314.1\|558529_559222_-	Tol-Pal system protein TolQ	NA	NA	NA	NA
WP_001098375.1\|559218_559623_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_000034601.1\|559772_560066_-	cyd operon protein YbgE	NA	NA	NA	NA
WP_000270282.1\|560065_560179_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
WP_000568275.1\|560193_561333_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_000884361.1\|561348_562917_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_001324497.1\|563512_563740_-	hypothetical protein	NA	NA	NA	NA
WP_153933088.1\|564895_565594_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	1.7e-126	93.5

DBSCAN-SWA_6

814935 : 876187

uncultured_Mediterranean_phage(18.75%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001266492.1\|814935_816006_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_000667313.1\|816061_817189_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.6e-89	46.1
WP_000007629.1\|817211_817544_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	2.8e-10	33.0
WP_000934825.1\|817571_819419_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_000046637.1\|819429_820401_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.0e-44	37.9
WP_000974813.1\|820529_820877_+	HNH nuclease family protein	NA	NA	NA	NA
WP_005030662.1\|821053_821938_-	nucleoside-specific channel-forming protein Tsx	NA	NA	NA	NA
WP_005004736.1\|822236_822776_-	DUF3251 domain-containing protein	NA	NA	NA	NA
WP_000543535.1\|822926_823376_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_001150462.1\|823379_824483_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	3.1e-53	35.5
WP_001021161.1\|824571_825042_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.3e-29	47.4
WP_000801125.1\|825061_825481_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_000742101.1\|825558_826536_+	thiamine-phosphate kinase	NA	NA	NA	NA
WP_000154044.1\|826513_827032_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA
WP_046891687.1\|827085_828048_-	1-deoxyxylulose-5-phosphate synthase YajO	NA	NA	NA	NA
WP_000006809.1\|828102_829965_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_000347225.1\|829989_830889_-	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_046891686.1\|830888_831131_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000668685.1\|831336_832785_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_001276309.1\|832838_833429_-	protein deglycase YajL	NA	NA	NA	NA
WP_000705861.1\|833391_834303_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_001138904.1\|834470_834962_+	nucleotide binding protein YajQ	NA	NA	NA	NA
WP_001000997.1\|835095_836454_-	MFS transporter	NA	NA	NA	NA
WP_000971338.1\|836602_837493_-	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_000019869.1\|837504_837834_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
WP_000179812.1\|837833_838448_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
WP_000467180.1\|838437_840429_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_000098438.1\|841858_843334_-	muropeptide MFS transporter AmpG	NA	NA	NA	NA
WP_005030624.1\|843377_843956_-	lipoprotein	NA	NA	NA	NA
WP_000973449.1\|844260_844578_+	transcriptional regulator BolA	NA	NA	NA	NA
WP_001198392.1\|844921_846220_+	trigger factor	NA	NA	NA	NA
WP_000122253.1\|846465_847089_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.9e-64	63.9
WP_000130306.1\|847214_848489_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.3e-132	56.6
WP_004981092.1\|848676_851031_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.6e-224	52.4
WP_001043542.1\|851239_851512_+	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.1e-20	58.4
WP_000969381.1\|851703_853575_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_000680312.1\|853725_854097_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_000099182.1\|854404_855943_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-293	99.0
WP_000612626.1\|855991_856339_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_001333468.1\|856335_856716_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000817229.1\|857089_857785_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.9e-88	68.0
WP_001238231.1\|857849_859550_-	SgrR family transcriptional regulator	NA	NA	NA	NA
WP_000113027.1\|859649_860468_+	HMP-PP phosphatase	NA	NA	NA	NA
WP_000884589.1\|860620_861079_+	DNA-binding transcriptional regulator DecR	NA	NA	NA	NA
WP_000878030.1\|862874_863894_+\|transposase	IS110-like element ISEc11 family transposase	NA	NA	NA	NA
WP_001163619.1\|864177_864324_+	hypothetical protein	NA	NA	NA	NA
WP_001256174.1\|864316_866098_+	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	1.4e-42	27.1
WP_000780338.1\|866278_866617_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_000684902.1\|866646_867933_+	ammonium transporter AmtB	NA	NA	NA	NA
WP_004981073.1\|867980_868841_-	acyl-CoA thioesterase II	NA	NA	NA	NA
WP_000779826.1\|869058_869631_+	lipoprotein	NA	NA	NA	NA
WP_171769601.1\|869723_871070_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000409911.1\|871099_871411_-	MGMT family protein	NA	NA	NA	NA
WP_000878140.1\|871789_872143_+	DUF1428 domain-containing protein	NA	NA	NA	NA
WP_094110543.1\|873361_874518_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_088895425.1\|874958_876187_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3

DBSCAN-SWA_7

905006 : 1010355

Stx2-converting_phage(25.71%)

integrase,protease,tRNA,transposase

attL 899115:899154|attR 975636:975675

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
899115:899154	attL	NA	NA	NA	NA
WP_000186627.1\|905006_905486_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_000365186.1\|905689_906484_-	TraB/GumN family protein	NA	NA	NA	NA
WP_005039895.1\|906621_906963_+	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	2.7e-40	73.6
WP_000083974.1\|907170_909675_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.1e-114	38.0
WP_000883032.1\|909936_910869_+	glutaminase A	NA	NA	NA	NA
WP_000982153.1\|910871_912164_+	amino acid permease	NA	NA	NA	NA
WP_001026747.1\|912288_912696_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000970323.1\|912696_913155_-	NfeD family protein	NA	NA	NA	NA
WP_000904502.1\|913151_914069_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_001157540.1\|914214_914892_+	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	1.4e-27	34.3
WP_005030189.1\|914878_915658_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_001295322.1\|915720_916575_-	chaperedoxin	NA	NA	NA	NA
WP_000148945.1\|916635_917445_-	NADP(+)-dependent aldehyde reductase	NA	NA	NA	NA
WP_001295836.1\|917434_918058_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_001110573.1\|918028_918715_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-33	35.6
WP_075319160.1\|925306_925648_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_088895425.1\|925736_926965_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001157963.1\|928456_929551_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_000460156.1\|929619_930522_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA
WP_000776388.1\|930751_931234_+	ureidoglycolate lyase	NA	NA	NA	NA
WP_000141275.1\|931311_932127_+	HTH-type transcriptional repressor AllR	NA	NA	NA	NA
WP_024259574.1\|932216_933998_+	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	7.8e-38	26.8
WP_001047109.1\|935021_935774_-	antitermination protein	Q8SBE4	Shigella_phage	9.0e-137	99.2
WP_001061406.1\|936783_937581_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	5.8e-150	99.2
WP_000767125.1\|937600_937990_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.3e-67	98.4
WP_000210161.1\|937986_938313_-	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	2.0e-53	99.1
WP_000066917.1\|938309_938963_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_073817732.1\|938962_939457_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.2e-84	96.3
WP_000099181.1\|940057_941596_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_153933092.1\|941644_941992_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_046891683.1\|941988_942369_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.5e-65	98.4
WP_000230709.1\|942481_942937_-	hypothetical protein	A0A1W6JPI4	Morganella_phage	1.1e-44	65.7
WP_000617443.1\|943195_943477_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000284450.1\|944080_944623_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_001350215.1\|944615_944975_-	hypothetical protein	NA	NA	NA	NA
WP_167544906.1\|946629_947843_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.3e-165	97.3
WP_001019377.1\|948911_949745_+	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	2.0e-20	46.7
WP_000042978.1\|949737_949917_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_005040399.1\|949913_950981_+	ash family protein	A0A1C9IHV9	Salmonella_phage	5.2e-13	37.1
WP_001065741.1\|950973_951168_+	hypothetical protein	NA	NA	NA	NA
WP_001024675.1\|951164_951428_+	hypothetical protein	NA	NA	NA	NA
WP_094096507.1\|951697_952866_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_046891682.1\|953032_953452_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	4.2e-35	74.2
WP_000624671.1\|953448_953799_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_001072392.1\|953829_955422_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.8e-172	61.2
WP_001063816.1\|955714_956842_-\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_000083332.1\|957306_957504_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	3.9e-07	48.1
WP_000251023.1\|957701_958583_-	hypothetical protein	NA	NA	NA	NA
WP_000772640.1\|958725_959940_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.7e-132	56.2
WP_000893276.1\|960295_961549_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.9e-95	47.0
WP_001285290.1\|961560_962664_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.3e-62	40.4
WP_000749890.1\|962951_964007_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	8.5e-117	60.3
WP_000174671.1\|964045_964447_-	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000189552.1\|964504_965749_-	esterase FrsA	NA	NA	NA	NA
WP_001291990.1\|965840_966299_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_001293009.1\|966559_968017_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_000602112.1\|968073_968688_-	peptide chain release factor H	NA	NA	NA	NA
WP_005041144.1\|969530_970727_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000528872.1\|970705_971272_-	RNA ligase RtcB family protein	U5PUG1	Bacillus_phage	2.0e-08	30.3
WP_001059855.1\|971517_971970_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001226164.1\|971966_973022_-	DNA polymerase IV	NA	NA	NA	NA
WP_000207568.1\|973092_973878_-	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_005039557.1\|973822_975562_+	flagellar type III secretion system protein FlhA	NA	NA	NA	NA
WP_000006234.1\|975785_976283_-\|transposase	REP-associated tyrosine transposase RayT	NA	NA	NA	NA
975636:975675	attR	NA	NA	NA	NA
WP_005025508.1\|976458_977208_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	5.8e-19	36.9
WP_001225679.1\|978284_979025_+	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000333380.1\|978995_979763_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_000284050.1\|979968_980547_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
WP_000973134.1\|980786_983231_+	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000532698.1\|983273_983747_-	C-lysozyme inhibitor	NA	NA	NA	NA
WP_001118027.1\|983900_984671_+	2-oxoglutaramate amidase	NA	NA	NA	NA
WP_001297205.1\|985890_986622_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
WP_000917883.1\|986686_987154_+	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001297210.1\|987150_987873_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001052720.1\|987906_988662_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_000644682.1\|988733_990092_+	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001230983.1\|990767_991568_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000648584.1\|991808_992723_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001140195.1\|999282_999855_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000593994.1\|1000042_1001074_+	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001294600.1\|1001066_1001720_+	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000874224.1\|1001759_1002575_+	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001202329.1\|1002692_1003097_+	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000094009.1\|1003093_1003801_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001260712.1\|1003911_1005630_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_005039402.1\|1005682_1006507_+	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_000239180.1\|1006706_1007417_-	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_000635540.1\|1007490_1007853_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_001185292.1\|1007849_1008395_-	YaeQ family protein	NA	NA	NA	NA
WP_000417058.1\|1008560_1008761_+	YaeP family protein	NA	NA	NA	NA
WP_000062312.1\|1008747_1009008_+	Rho-binding antiterminator	NA	NA	NA	NA
WP_000176566.1\|1009056_1010355_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA

DBSCAN-SWA_8

1275642 : 1319139

Stx2-converting_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005041144.1\|1275642_1276839_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_073817651.1\|1278847_1278928_-	DUF1127 domain-containing protein	NA	NA	NA	NA
WP_094096507.1\|1279697_1280866_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_001137007.1\|1282317_1283550_+	multidrug efflux MFS transporter MdtM	NA	NA	NA	NA
WP_001037377.1\|1283590_1284871_+	DUF445 domain-containing protein	NA	NA	NA	NA
WP_000222495.1\|1286149_1286917_+	hypothetical protein	NA	NA	NA	NA
WP_000657676.1\|1286913_1287171_+	DUF3343 domain-containing protein	NA	NA	NA	NA
WP_162281793.1\|1287124_1288096_+	YjiK family protein	NA	NA	NA	NA
WP_001141187.1\|1288163_1289342_+	MFS transporter	NA	NA	NA	NA
WP_162281794.1\|1289354_1290011_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	5.4e-37	43.0
WP_001295597.1\|1290158_1290842_+	nucleoside recognition pore and gate family inner membrane transporter	NA	NA	NA	NA
WP_000211971.1\|1290838_1291300_+	hypothetical protein	NA	NA	NA	NA
WP_000568428.1\|1291312_1292485_+	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_000340766.1\|1292549_1293461_+	hypochlorite stress DNA-binding transcriptional regulator HypT	NA	NA	NA	NA
WP_000986206.1\|1293453_1293846_-	anti-adapter protein IraD	NA	NA	NA	NA
WP_120795393.1\|1293842_1293926_-	iraD leader peptide	NA	NA	NA	NA
WP_000062561.1\|1295294_1296125_+	DUF2686 family protein	NA	NA	NA	NA
WP_000833687.1\|1297040_1297817_-	Uxu operon transcriptional regulator	NA	NA	NA	NA
WP_000208186.1\|1298031_1299492_-	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	1.6e-49	32.2
WP_000438559.1\|1299572_1300757_-	mannonate dehydratase	NA	NA	NA	NA
WP_000872005.1\|1302465_1302969_-	type 1 fimbria minor subunit FimG	NA	NA	NA	NA
WP_001244838.1\|1302981_1303512_-	type 1 fimbria minor subunit FimF	NA	NA	NA	NA
WP_001162467.1\|1303521_1303887_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_000824117.1\|1309316_1309856_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_000695563.1\|1309920_1310469_-	metal ABC transporter substrate-binding lipoprotein/fibrin-binding adhesin FimA	NA	NA	NA	NA
WP_000435415.1\|1310744_1311164_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-36	77.3
WP_000624671.1\|1311160_1311511_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_001072392.1\|1311541_1313134_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.8e-172	61.2
WP_001243643.1\|1313164_1313458_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.9e-51	100.0
WP_000099204.1\|1313506_1315045_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.3e-294	99.0
WP_153933094.1\|1315292_1316461_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.9e-182	99.0
WP_000856939.1\|1317246_1317930_-	WYL domain-containing protein	NA	NA	NA	NA
WP_134800437.1\|1317982_1319139_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	9.8e-66	44.4

DBSCAN-SWA_9

1414855 : 1551033

100

Stx2-converting_phage(27.27%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000811566.1\|1414855_1415131_+\|protease	protease activator YjfN	NA	NA	NA	NA
WP_000558725.1\|1415247_1416873_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_032335874.1\|1416956_1417991_-	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	1.2e-67	39.5
WP_088895425.1\|1418058_1419286_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000101670.1\|1419353_1419992_-	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_000547762.1\|1420001_1420400_-	DUF350 domain-containing protein	NA	NA	NA	NA
WP_000012566.1\|1420417_1421077_-	YjfK family protein	NA	NA	NA	NA
WP_000511951.1\|1421127_1421826_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_001034109.1\|1425451_1429309_+\|protease	serine protease autotransporter toxin SigA	Q9LA58	Enterobacterial_phage	2.0e-224	38.2
WP_005045429.1\|1430969_1433237_+	arginine decarboxylase	NA	NA	NA	NA
WP_001217059.1\|1433561_1434323_+	DNA-binding transcriptional activator AdiY	NA	NA	NA	NA
WP_024259688.1\|1436678_1438322_+	phosphoethanolamine transferase EptA	NA	NA	NA	NA
WP_046891667.1\|1438318_1438987_+	two-component system response regulator BasR	NA	NA	NA	NA
WP_001052136.1\|1438987_1440088_+	two-component system sensor histidine kinase PmrB	NA	NA	NA	NA
WP_000797656.1\|1440063_1440153_-	LpxT activity modulator PmrR	NA	NA	NA	NA
WP_000919721.1\|1440264_1441767_-	glycine betaine/L-proline transporter ProP	Q6JIH2	Burkholderia_virus	4.1e-56	31.0
WP_000169196.1\|1442031_1442910_-	hypothetical protein	NA	NA	NA	NA
WP_000288547.1\|1442906_1445135_-	clamp-binding protein CrfC	NA	NA	NA	NA
WP_001300891.1\|1446312_1446648_+	phnA family protein	NA	NA	NA	NA
WP_001131343.1\|1446807_1447251_+	VOC family metalloprotein YjdN	NA	NA	NA	NA
WP_001193422.1\|1447383_1448172_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-25	36.4
WP_000991980.1\|1448196_1449213_+	phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001193503.1\|1449338_1450118_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_001072392.1\|1450692_1452285_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.8e-172	61.2
WP_000624671.1\|1452315_1452666_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_000435415.1\|1452662_1453082_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-36	77.3
WP_001183287.1\|1453267_1453585_+	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_000819746.1\|1453653_1453983_+	protein YjdP	NA	NA	NA	NA
WP_000059947.1\|1454129_1454888_-	phosphonate metabolism protein PhnP	NA	NA	NA	NA
WP_001110504.1\|1454889_1455324_-	aminoalkylphosphonate N-acetyltransferase	NA	NA	NA	NA
WP_000971894.1\|1455310_1455868_-	ribose 1,5-bisphosphokinase	NA	NA	NA	NA
WP_000586303.1\|1455867_1457004_-	alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase	NA	NA	NA	NA
WP_000611423.1\|1457000_1457681_-	phosphonate C-P lyase system protein PhnL	G9BWD6	Planktothrix_phage	1.7e-17	33.6
WP_001075525.1\|1457791_1458550_-	phosphonate C-P lyase system protein PhnK	G3M9Y6	Bacillus_virus	1.0e-15	27.8
WP_000002283.1\|1458546_1459392_-	alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ	NA	NA	NA	NA
WP_005045173.1\|1459384_1460449_-	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI	NA	NA	NA	NA
WP_000171616.1\|1460448_1461033_-	phosphonate C-P lyase system protein PhnH	NA	NA	NA	NA
WP_000542751.1\|1461029_1461482_-	phosphonate C-P lyase system protein PhnG	NA	NA	NA	NA
WP_000099181.1\|1461729_1463268_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612626.1\|1463316_1463664_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_153933095.1\|1463660_1464041_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	6.0e-65	97.6
WP_000950648.1\|1465093_1465486_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_077897571.1\|1465492_1467094_+\|transposase	IS66-like element ISEc49 family transposase	A0A218MNE7	uncultured_virus	7.7e-77	36.4
WP_000221546.1\|1467786_1468356_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_000270997.1\|1468522_1468906_+	hypothetical protein	NA	NA	NA	NA
WP_001013309.1\|1468902_1469361_+	hypothetical protein	NA	NA	NA	NA
WP_171769603.1\|1471167_1472396_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	4.2e-176	98.7
WP_005024678.1\|1472406_1472841_+	hypothetical protein	NA	NA	NA	NA
WP_000074489.1\|1473290_1474484_-	MFS transporter	NA	NA	NA	NA
WP_001403387.1\|1474619_1476344_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287499.1\|1476344_1477292_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015718.1\|1477291_1479034_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750143.1\|1479030_1480368_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001387241.1\|1480373_1482569_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_001063816.1\|1482973_1484101_+\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_005026022.1\|1487606_1488320_+	acid phosphatase AphA	NA	NA	NA	NA
WP_000270377.1\|1488430_1488847_+	YjbQ family protein	NA	NA	NA	NA
WP_000155655.1\|1488850_1489207_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_000357691.1\|1489241_1492064_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	56.1
WP_000168305.1\|1492317_1492854_+	single-stranded DNA-binding protein SSB1	A0A0A0P1Q9	Enterobacteria_phage	1.1e-56	78.7
WP_001295689.1\|1492952_1493234_-	YjcB family protein	NA	NA	NA	NA
WP_000019553.1\|1493663_1494404_+	CSS-motif domain-containing protein	NA	NA	NA	NA
WP_000019358.1\|1496510_1496834_-	superoxide response transcriptional regulator SoxS	NA	NA	NA	NA
WP_000412428.1\|1496919_1497384_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
WP_000106873.1\|1497928_1499278_+	guanine/hypoxanthine transporter GhxP	A0A0R6PHV4	Moraxella_phage	3.7e-157	71.4
WP_000402207.1\|1499429_1501079_+	Na+/H+ antiporter	NA	NA	NA	NA
WP_134800436.1\|1501525_1502222_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	1.1e-125	93.1
WP_000832577.1\|1502291_1503941_-	cation/acetate symporter ActP	NA	NA	NA	NA
WP_001014565.1\|1503937_1504252_-	DUF485 domain-containing protein	NA	NA	NA	NA
WP_005045745.1\|1506802_1508239_+	ammonia-forming nitrite reductase cytochrome c552 subunit	NA	NA	NA	NA
WP_001296647.1\|1508283_1508850_+	cytochrome c nitrite reductase pentaheme subunit	NA	NA	NA	NA
WP_000220281.1\|1508846_1509518_+	cytochrome c nitrite reductase Fe-S protein	NA	NA	NA	NA
WP_000195158.1\|1509514_1510471_+	cytochrome c nitrite reductase subunit NrfD	NA	NA	NA	NA
WP_071821661.1\|1510490_1512209_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_001032546.1\|1512201_1512585_+	heme lyase NrfEFG subunit NrfF	NA	NA	NA	NA
WP_000662604.1\|1512581_1513178_+	heme lyase NrfEFG subunit NrfG	NA	NA	NA	NA
WP_000789585.1\|1513519_1514833_+	glutamate/aspartate:proton symporter GltP	NA	NA	NA	NA
WP_077897533.1\|1515805_1517953_-	formate dehydrogenase subunit alpha	A0A077SK27	Escherichia_phage	2.7e-32	23.9
WP_046891665.1\|1518150_1519617_-	multidrug efflux transporter outer membrane subunit MdtP	NA	NA	NA	NA
WP_001275142.1\|1519613_1521665_-	multidrug efflux transporter permease subunit MdtO	NA	NA	NA	NA
WP_004988094.1\|1522713_1522989_-	hypothetical protein	NA	NA	NA	NA
WP_001066003.1\|1523197_1525183_-	alkyl sulfatase YjcS	A0A2P0VMX1	Tetraselmis_virus	8.7e-147	44.1
WP_001063816.1\|1525474_1526602_+\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_167544906.1\|1528144_1529357_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.3e-165	97.3
WP_000624671.1\|1529761_1530112_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_000435424.1\|1530108_1530528_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	8.5e-36	76.3
WP_000477614.1\|1532094_1532421_-	hypothetical protein	NA	NA	NA	NA
WP_171769604.1\|1533525_1534754_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001223346.1\|1535208_1537299_+	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
WP_129592959.1\|1538096_1539252_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.5e-66	44.4
WP_000099177.1\|1540538_1542077_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.2e-294	99.0
WP_000612610.1\|1542125_1542473_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|1542469_1542850_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_001293267.1\|1543063_1543795_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000076296.1\|1543975_1546417_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.7e-67	33.1
WP_001177640.1\|1546455_1546881_-	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA
WP_000527955.1\|1547085_1548384_-	adenylosuccinate synthase	W5S5V7	Pithovirus	2.2e-66	35.9
WP_001089295.1\|1548487_1548685_-	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_001232412.1\|1548766_1549771_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_000312488.1\|1549773_1551033_-\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5

DBSCAN-SWA_10

1912645 : 1980289

Stx2-converting_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171769605.1\|1912645_1913874_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.2e-175	98.3
WP_094112384.1\|1913947_1914277_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_001140251.1\|1914475_1914757_+	peptidylprolyl isomerase PpiC	NA	NA	NA	NA
WP_001295253.1\|1914843_1916319_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_000365778.1\|1916468_1917359_+	HTH-type transcriptional activator IlvY	NA	NA	NA	NA
WP_000785598.1\|1917355_1918900_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_001127401.1\|1918902_1920753_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_000208520.1\|1920817_1921747_-	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_000983255.1\|1921766_1922030_-	acetolactate synthase 2 small subunit	NA	NA	NA	NA
WP_001012626.1\|1922026_1923673_-	acetolactate synthase 2 catalytic subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	5.7e-67	31.8
WP_113771618.1\|1923675_1923726_-	hypothetical protein	NA	NA	NA	NA
WP_001311244.1\|1923812_1923911_-	ilv operon leader peptide	NA	NA	NA	NA
WP_005044890.1\|1924261_1925422_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_000841001.1\|1925709_1926048_-	macrodomain Ori organization protein MaoP	NA	NA	NA	NA
WP_000379241.1\|1926166_1927006_+	HTH-type transcriptional regulator HdfR	NA	NA	NA	NA
WP_001131174.1\|1932898_1933591_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_001280817.1\|1933613_1935041_+	multidrug transporter subunit MdtD	NA	NA	NA	NA
WP_000224470.1\|1935006_1935999_-	ribose operon transcriptional repressor RbsR	NA	NA	NA	NA
WP_001300603.1\|1936002_1936932_-	ribokinase	NA	NA	NA	NA
WP_000211846.1\|1937968_1938934_-	ribose ABC transporter permease	NA	NA	NA	NA
WP_000387790.1\|1938938_1939307_-	hypothetical protein	NA	NA	NA	NA
WP_000715936.1\|1939314_1939734_-	D-ribose pyranase	NA	NA	NA	NA
WP_171769606.1\|1941980_1943327_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005045000.1\|1943429_1944926_+	ATPase RavA	NA	NA	NA	NA
WP_000956628.1\|1944919_1946371_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_000845107.1\|1946375_1947368_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	2.2e-50	37.7
WP_000432970.1\|1947519_1947978_+	transcriptional regulator AsnC	NA	NA	NA	NA
WP_000763732.1\|1948067_1948511_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_000499753.1\|1948889_1950779_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000932840.1\|1950842_1951466_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_000116695.1\|1952082_1952463_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_000135625.1\|1952471_1953287_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_000429386.1\|1953333_1953573_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_001052219.1\|1953634_1954105_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_001288587.1\|1954119_1954653_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_001176745.1\|1954665_1956207_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_000896498.1\|1956257_1957121_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_000190506.1\|1957147_1958530_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_001251973.1\|1958550_1958970_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_000933714.1\|1959319_1960690_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	6.9e-34	36.3
WP_000334043.1\|1960851_1962681_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	7.3e-132	43.2
WP_005044990.1\|1962730_1964077_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000827805.1\|1964421_1964994_+	fimbrial protein	NA	NA	NA	NA
WP_073817747.1\|1965041_1965185_+	pilus assembly protein	NA	NA	NA	NA
WP_000099181.1\|1965604_1967143_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|1967191_1967539_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|1967535_1967916_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000377786.1\|1969150_1969876_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000063125.1\|1969890_1970664_-	phosphate ABC transporter ATP-binding protein PstB	G9BWD6	Planktothrix_phage	1.3e-18	31.6
WP_001251975.1\|1970754_1971645_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_000741620.1\|1971644_1972604_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA
WP_000867146.1\|1972690_1973731_-	phosphate ABC transporter substrate-binding protein PstS	A0A1D7SRJ6	Cyanophage	2.7e-51	38.3
WP_001046014.1\|1973978_1975052_-	fimbrial protein	NA	NA	NA	NA
WP_088895425.1\|1976091_1977319_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000262788.1\|1978935_1979532_-	fimbrial chaperone	NA	NA	NA	NA
WP_134800821.1\|1979592_1980289_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	3.0e-126	93.1

DBSCAN-SWA_11

2205403 : 2210934

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171769607.1\|2205403_2206632_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001333468.1\|2206745_2207126_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612626.1\|2207122_2207470_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000099181.1\|2207518_2209057_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000922639.1\|2209236_2210526_-	arsenite/antimonite:H(+) antiporter ArsB	A0A2H4J144	uncultured_Caudovirales_phage	4.6e-173	73.5
WP_000008974.1\|2210580_2210934_-	arsenical resistance operon transcriptional regulator ArsR	A0A2H4J145	uncultured_Caudovirales_phage	2.2e-24	50.0

DBSCAN-SWA_12

2477439 : 2540038

Staphylococcus_phage(11.11%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005042757.1\|2477439_2478636_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_024259669.1\|2480864_2481137_-	hypothetical protein	NA	NA	NA	NA
WP_001295556.1\|2481804_2482137_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_000071134.1\|2482364_2483702_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_000764742.1\|2483694_2484543_-	dihydropteroate synthase	S4W084	Pandoravirus	1.5e-23	30.1
WP_001107476.1\|2484632_2486567_-\|protease	ATP-dependent zinc metalloprotease FtsH	G8DDJ2	Micromonas_pusilla_virus	4.1e-117	43.5
WP_000145975.1\|2486666_2487296_-	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_001054420.1\|2487421_2487715_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_001193478.1\|2487871_2488348_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_001212655.1\|2488595_2490029_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_000673544.1\|2490068_2491241_-	Obg family GTPase CgtA	NA	NA	NA	NA
WP_000813019.1\|2491256_2492222_-	DMT family transporter	NA	NA	NA	NA
WP_000940595.1\|2492348_2492606_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_000271401.1\|2492626_2492938_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_001047336.1\|2493196_2494168_+	octaprenyl diphosphate synthase	A0A1V0SE37	Indivirus	6.0e-08	25.8
WP_000445420.1\|2494394_2494673_+	DNA-binding transcriptional regulator SfsB	A0A2I7S995	Vibrio_phage	7.6e-17	69.8
WP_000357260.1\|2494720_2495980_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000429656.1\|2496034_2496289_-	BolA family iron metabolism protein IbaG	NA	NA	NA	NA
WP_000004488.1\|2496448_2496742_-	lipid asymmetry maintenance protein MlaB	NA	NA	NA	NA
WP_000476487.1\|2496741_2497377_-	phospholipid-binding protein MlaC	NA	NA	NA	NA
WP_001296448.1\|2497395_2497947_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_000925795.1\|2497951_2498734_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_000438245.1\|2498741_2499551_-	phospholipid ABC transporter ATP-binding protein MlaF	G3M9Y6	Bacillus_virus	2.2e-19	29.3
WP_046891644.1\|2499760_2500738_+	calcium/sodium antiporter	NA	NA	NA	NA
WP_005028950.1\|2500751_2501738_+	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	5.6e-38	31.2
WP_000030005.1\|2501758_2502325_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	1.4e-54	75.7
WP_000030537.1\|2502321_2502897_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_000669785.1\|2502865_2503423_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
WP_000224099.1\|2503429_2504155_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-22	28.4
WP_000809051.1\|2504202_2505636_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_001176597.1\|2505658_2505946_+	ribosome hibernation promoting factor	A0A0M7QCF2	Escherichia_phage	4.2e-10	44.3
WP_000183676.1\|2506063_2506555_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_000243741.1\|2506600_2507455_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-05	28.4
WP_000216791.1\|2507451_2507724_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA
WP_000620401.1\|2507937_2508570_+	PhoP regulatory network protein YrbL	NA	NA	NA	NA
WP_000047091.1\|2508566_2509295_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
WP_005028964.1\|2509291_2509945_-	isoprenoid biosynthesis glyoxalase ElbB	NA	NA	NA	NA
WP_000809767.1\|2510174_2512511_-	aerobic respiration two-component sensor histidine kinase ArcB	A0A1V0SGX0	Hokovirus	1.7e-40	31.2
WP_005044260.1\|2512606_2513536_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	8.8e-17	35.0
WP_005028970.1\|2514209_2518670_+	glutamate synthase large subunit	NA	NA	NA	NA
WP_000081674.1\|2518682_2520101_+	glutamate synthase subunit GltD	NA	NA	NA	NA
WP_001333468.1\|2520578_2520959_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612626.1\|2520955_2521303_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000639208.1\|2523229_2523535_+\|transposase	transposase	NA	NA	NA	NA
WP_000979883.1\|2523610_2524075_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000209048.1\|2524071_2524947_-	N-acetylmannosamine kinase	NA	NA	NA	NA
WP_000054239.1\|2524943_2525633_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_000108471.1\|2525680_2527171_-	sialic acid transporter NanT	Q6JIH2	Burkholderia_virus	4.9e-09	23.6
WP_000224714.1\|2527279_2528173_-	N-acetylneuraminate lyase	NA	NA	NA	NA
WP_000523845.1\|2528294_2529086_-	transcriptional regulator NanR	NA	NA	NA	NA
WP_000366129.1\|2531652_2532150_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	3.3e-26	42.9
WP_000257293.1\|2532155_2532794_-	stringent starvation protein A	NA	NA	NA	NA
WP_000829818.1\|2533188_2533581_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_004986574.1\|2533596_2534025_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_001192311.1\|2534243_2535371_-	cell division protein ZapE	NA	NA	NA	NA
WP_001295270.1\|2535564_2535963_+	DUF1043 family protein	NA	NA	NA	NA
WP_005044006.1\|2536116_2537484_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	2.3e-21	25.6
WP_000497730.1\|2537573_2538641_+	outer membrane-stress sensor serine endopeptidase DegS	A0A1S5Y2X3	uncultured_archaeal_virus	6.8e-05	24.2
WP_000483770.1\|2538691_2540038_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

2848634 : 2861769

Escherichia_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|2848634_2849396_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|2849389_2850016_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272581.1\|2850155_2851247_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|2851309_2852302_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104447.1\|2852395_2853760_-	GntP family transporter	NA	NA	NA	NA
WP_001136921.1\|2853848_2854625_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278997.1\|2854629_2855268_-	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.5
WP_000590422.1\|2855264_2856527_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.4e-134	61.2
WP_000848005.1\|2856523_2857432_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.3e-117	76.2
WP_001297141.1\|2857627_2858395_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
WP_001272926.1\|2859207_2861769_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6

DBSCAN-SWA_14

3029409 : 3075776

Stx2-converting_phage(44.44%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000264777.1\|3029409_3030177_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000065255.1\|3030218_3030566_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_000589818.1\|3030642_3031125_-	OmpA family protein	NA	NA	NA	NA
WP_004985941.1\|3033789_3034155_-	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001168066.1\|3034362_3035433_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_000225221.1\|3035443_3036565_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_000200116.1\|3036607_3037768_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_001386991.1\|3037867_3037915_-	hypothetical protein	NA	NA	NA	NA
WP_000178456.1\|3038018_3038360_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_000197686.1\|3040138_3040876_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000079103.1\|3041010_3041991_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	A0A2H4UV25	Bodo_saltans_virus	2.8e-05	25.1
WP_000040159.1\|3041987_3042719_+	polyphenol oxidase	NA	NA	NA	NA
WP_001235102.1\|3042848_3045422_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_001333468.1\|3052152_3052533_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|3052529_3052877_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000099181.1\|3052925_3054464_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_153933117.1\|3054786_3055943_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_073817198.1\|3056295_3056619_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_000949272.1\|3056664_3058020_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_000083004.1\|3058133_3060794_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000138184.1\|3060825_3061524_-	DTW domain-containing protein	NA	NA	NA	NA
WP_001098726.1\|3061592_3062012_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_000997403.1\|3062218_3063256_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001262727.1\|3063303_3063993_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	48.4
WP_000627807.1\|3064297_3064681_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
WP_000189207.1\|3064736_3065324_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_134805288.1\|3065447_3066675_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_005027037.1\|3066761_3067643_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000219197.1\|3067851_3069186_-	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_005007860.1\|3069317_3070055_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_001333468.1\|3071346_3071727_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|3071723_3072071_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_153933118.1\|3072119_3073658_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-290	98.0
WP_046891728.1\|3073742_3074162_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	1.4e-35	76.3
WP_000612610.1\|3075051_3075399_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001171522.1\|3075395_3075776_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.5e-65	98.4

DBSCAN-SWA_15

3253805 : 3328150

Stx2-converting_phage(38.46%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000695657.1\|3253805_3255221_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_001341599.1\|3255271_3255643_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001296278.1\|3255665_3256010_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_005043438.1\|3256644_3258834_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_171769611.1\|3258929_3260276_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005031738.1\|3260322_3261525_-	nucleoside permease NupC	NA	NA	NA	NA
WP_000186369.1\|3261860_3263099_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_000490072.1\|3263239_3263566_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_000903157.1\|3263680_3264937_-	ion channel protein	NA	NA	NA	NA
WP_000598932.1\|3265140_3266106_+	glucokinase	NA	NA	NA	NA
WP_005043385.1\|3266324_3266651_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_000985336.1\|3266672_3267920_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_000173245.1\|3267934_3269020_+	aminopeptidase	NA	NA	NA	NA
WP_000366045.1\|3269019_3269808_+	aminopeptidase	NA	NA	NA	NA
WP_000492409.1\|3269847_3270057_+	aminopeptidase Y	NA	NA	NA	NA
WP_000955852.1\|3270081_3272577_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_005031743.1\|3272579_3273317_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_001295458.1\|3273445_3274180_-	two-component system response regulator YpdB	A0A2R2ZGH8	Clostridioides_phage	3.6e-13	25.4
WP_000544359.1\|3274194_3275892_-	two-component system sensor histidine kinase YpdA	NA	NA	NA	NA
WP_000785925.1\|3276268_3277507_+	alanine transaminase	NA	NA	NA	NA
WP_010723117.1\|3277571_3277643_-	membrane protein YpdK	NA	NA	NA	NA
WP_000484400.1\|3277998_3278919_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	5.4e-75	54.1
WP_000639883.1\|3279271_3279514_+	YfdY family protein	NA	NA	NA	NA
WP_000867639.1\|3279590_3279866_-	hypothetical protein	NA	NA	NA	NA
WP_000825604.1\|3280161_3280794_+	YfdX family protein	NA	NA	NA	NA
WP_129592899.1\|3280959_3282115_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_000106759.1\|3282573_3283824_+	formyl-CoA transferase	NA	NA	NA	NA
WP_001283487.1\|3283877_3285572_+	oxalyl-CoA decarboxylase	E5ERI2	Ostreococcus_lucimarinus_virus	1.8e-23	23.6
WP_000955028.1\|3285641_3286586_+	transporter YfdV	NA	NA	NA	NA
WP_094096497.1\|3287617_3287947_+	hypothetical protein	NA	NA	NA	NA
WP_024259641.1\|3290785_3294379_-	acid-sensing system histidine kinase EvgS	A0A1V0SGX0	Hokovirus	2.3e-36	31.8
WP_000991370.1\|3294383_3294998_-	acid-sensing system DNA-binding response regulator EvgA	NA	NA	NA	NA
WP_000435167.1\|3295413_3296577_+	multidrug efflux MFS transporter periplasmic adaptor subunit EmrK	NA	NA	NA	NA
WP_001018714.1\|3296576_3298115_+	multidrug efflux MFS transporter permease subunit EmrY	NA	NA	NA	NA
WP_001333468.1\|3300739_3301120_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|3301116_3301464_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000099181.1\|3301512_3303051_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_088895425.1\|3303961_3305189_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000844746.1\|3305325_3305865_-	fimbrial protein	NA	NA	NA	NA
WP_000714140.1\|3305861_3306350_-	fimbrial protein	NA	NA	NA	NA
WP_046891762.1\|3306346_3306856_-	fimbrial protein	NA	NA	NA	NA
WP_000482745.1\|3306871_3307624_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000445012.1\|3311143_3311398_-	hypothetical protein	NA	NA	NA	NA
WP_000033325.1\|3312222_3312483_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_001195819.1\|3313157_3313643_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000424994.1\|3313845_3315990_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_000531964.1\|3315989_3317300_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030901.1\|3317478_3317763_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_005025042.1\|3318134_3319475_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_005042757.1\|3319939_3321136_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000776768.1\|3323382_3324138_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_046891760.1\|3324431_3325364_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.5e-165	99.0
WP_000435427.1\|3325760_3326180_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.1e-35	76.3
WP_000624671.1\|3326176_3326527_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_001072392.1\|3326557_3328150_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.8e-172	61.2

DBSCAN-SWA_16

3420859 : 3474473

Shigella_phage(23.53%)

protease,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000140570.1\|3420859_3421762_-\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	2.5e-69	54.8
WP_001000359.1\|3421954_3423145_-	anaerobic glycerol-3-phosphate dehydrogenase subunit C	NA	NA	NA	NA
WP_001209905.1\|3423141_3424401_-	glycerol-3-phosphate dehydrogenase subunit GlpB	NA	NA	NA	NA
WP_000857231.1\|3424390_3426019_-	anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA	NA	NA	NA
WP_000948732.1\|3426291_3427650_+	glycerol-3-phosphate transporter	NA	NA	NA	NA
WP_000779090.1\|3427654_3428731_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	5.1e-08	46.0
WP_167544916.1\|3428986_3430215_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000202532.1\|3430225_3430450_+	hypothetical protein	NA	NA	NA	NA
WP_000135040.1\|3431233_3431488_-	ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE	G9IAA2	Pseudomonas_phage	2.6e-24	73.1
WP_005028363.1\|3431487_3432618_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	4.3e-175	79.1
WP_001075159.1\|3432764_3435050_-	ribonucleoside-diphosphate reductase subunit alpha	A0A2D1GNB1	Pseudoalteromonas_phage	1.5e-283	63.6
WP_073817308.1\|3436611_3437748_+	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA
WP_000990754.1\|3439665_3440388_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA
WP_046891757.1\|3440534_3443162_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	1.4e-91	30.3
WP_094096507.1\|3444115_3445284_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_077897128.1\|3445338_3445518_+	IS1 encoded protein	A0A0C4UQV0	Shigella_phage	2.4e-16	66.7
WP_000902853.1\|3445520_3446066_+\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	2.2e-68	68.7
WP_000551126.1\|3447410_3448034_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	5.4e-79	76.5
WP_001039895.1\|3448033_3448213_+	hypothetical protein	NA	NA	NA	NA
WP_000801158.1\|3448213_3449977_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_001225840.1\|3456736_3457432_+	hypothetical protein	NA	NA	NA	NA
WP_153933120.1\|3457366_3458535_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.9e-182	99.0
WP_094139026.1\|3458573_3458765_+	DUF2135 domain-containing protein	NA	NA	NA	NA
WP_000876039.1\|3459039_3461889_+	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	4.1e-41	27.2
WP_001061917.1\|3462088_3462739_-	transcriptional regulator RcsB	NA	NA	NA	NA
WP_001249158.1\|3462755_3465428_-	phosphotransferase RcsD	NA	NA	NA	NA
WP_000865598.1\|3466166_3467297_+	porin OmpC	Q1MVN1	Enterobacteria_phage	6.3e-118	59.2
WP_000406113.1\|3467408_3468464_+	FAD:protein FMN transferase ApbE	NA	NA	NA	NA
WP_000786355.1\|3468537_3469602_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	3.1e-18	49.5
WP_000884959.1\|3469601_3470252_+	DNA oxidative demethylase AlkB	A0A2K9L3R7	Tupanvirus	1.1e-05	31.7
WP_000422160.1\|3470327_3471971_+	microcin J25 efflux ABC transporter YojI	W8CYL7	Bacillus_phage	2.8e-13	24.0
WP_000758039.1\|3472188_3473835_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_005024548.1\|3473984_3474473_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA

DBSCAN-SWA_17

3540459 : 3652919

102

Enterobacteria_phage(43.75%)

head,portal,holin,tail,capsid,transposase,tRNA,lysis,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000099181.1\|3540459_3541998_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|3542046_3542394_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|3542390_3542771_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_001136326.1\|3543767_3545006_-	NAD-dependent dihydropyrimidine dehydrogenase subunit PreT	NA	NA	NA	NA
WP_000383099.1\|3545199_3545439_-	DUF2542 family protein	NA	NA	NA	NA
WP_000920064.1\|3545441_3546161_-	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_000553568.1\|3546310_3547195_-	cytidine deaminase	NA	NA	NA	NA
WP_000968208.1\|3547324_3548020_-\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_001295452.1\|3548016_3548415_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_001311941.1\|3548653_3549604_+\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
WP_000079515.1\|3552188_3552950_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_001296821.1\|3553079_3553658_-	DedA family protein	NA	NA	NA	NA
WP_001295454.1\|3553827_3554415_+	YIP1 family protein	NA	NA	NA	NA
WP_005042675.1\|3554588_3555521_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_000097366.1\|3555558_3557274_-	D-lactate dehydrogenase	NA	NA	NA	NA
WP_000871503.1\|3557469_3559767_+	beta-glucosidase BglX	NA	NA	NA	NA
WP_001131257.1\|3559977_3560895_+	glycine betaine ABC transporter substrate-binding protein OsmF	NA	NA	NA	NA
WP_000221790.1\|3560901_3562059_+	glycine betaine ABC transporter permease YehY	NA	NA	NA	NA
WP_000569335.1\|3562051_3562978_+	glycine betaine ABC transporter ATP binding protein YehX	G9BWD6	Planktothrix_phage	4.3e-24	35.1
WP_000783120.1\|3562982_3563714_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|3563694_3563802_-	protein YohO	NA	NA	NA	NA
WP_032335723.1\|3563861_3564563_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	5.7e-101	98.4
WP_000063632.1\|3564583_3565870_-	DUF3596 domain-containing protein	Q9EY96	Enterobacteria_phage	2.9e-252	99.8
WP_001193437.1\|3565903_3566158_-	excisionase family protein	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
WP_000457723.1\|3566314_3566557_-	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
WP_000208031.1\|3566641_3567154_-	hypothetical protein	A0A1U9AJ59	Stx1_converting_phage	9.3e-77	96.7
WP_000224224.1\|3567164_3567428_-	hypothetical protein	S4TNB5	Salmonella_phage	7.4e-30	70.1
WP_000034218.1\|3567429_3567975_-	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	1.2e-69	72.9
WP_001300189.1\|3567961_3568276_-	hypothetical protein	B1GS43	Salmonella_phage	2.8e-39	86.0
WP_000179801.1\|3568229_3568547_-	DUF4752 family protein	A0A1I9LJV1	Stx_converting_phage	7.6e-37	81.5
WP_153933121.1\|3568655_3569823_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.6e-180	98.4
WP_000838344.1\|3570180_3570837_-	helix-turn-helix domain-containing protein	Q8W648	Enterobacteria_phage	3.1e-125	97.7
WP_046891753.1\|3570948_3571176_+	hypothetical protein	Q8W647	Enterobacteria_phage	4.2e-29	89.6
WP_001090258.1\|3571172_3571880_+	Rha family transcriptional regulator	Q8W645	Enterobacteria_phage	3.9e-118	91.1
WP_000587268.1\|3571988_3572840_+	Rha family phage regulatory protein	A0A1C9IHV9	Salmonella_phage	1.8e-93	65.8
WP_000626792.1\|3572836_3573031_+	hypothetical protein	NA	NA	NA	NA
WP_000618008.1\|3573027_3573252_+	hypothetical protein	NA	NA	NA	NA
WP_000061547.1\|3573248_3574073_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	7.4e-92	69.5
WP_024259623.1\|3574083_3574962_+	ATP-binding protein	Q8W641	Enterobacteria_phage	1.5e-138	94.4
WP_000203850.1\|3574958_3576359_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	3.5e-243	91.5
WP_046891752.1\|3576355_3576613_+	hypothetical protein	Q8W639	Enterobacteria_phage	8.1e-21	68.8
WP_001202272.1\|3576664_3577654_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	5.8e-192	97.9
WP_001204797.1\|3577671_3578064_+	antitermination protein Q	Q8W638	Enterobacteria_phage	2.7e-36	57.6
WP_167544908.1\|3578087_3579316_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.8e-177	99.0
WP_000024336.1\|3580198_3581248_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.0e-183	89.6
WP_005041363.1\|3584095_3584311_+\|holin	class II holin family protein	G9L6J5	Escherichia_phage	2.0e-33	98.6
WP_000731248.1\|3584315_3585041_+	YdfR family protein	Q08JA0	Stx2-converting_phage	6.4e-124	94.5
WP_001092855.1\|3585935_3586469_+	lysozyme	Q6H9V6	Enterobacteria_phage	1.6e-100	95.5
WP_153933122.1\|3586767_3587235_+\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	1.2e-70	91.0
WP_001415975.1\|3587428_3587623_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	4.3e-27	96.9
WP_000867571.1\|3588010_3588559_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	2.3e-57	83.5
WP_024259718.1\|3588530_3590459_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.1e-258	66.4
WP_000259002.1\|3590442_3590649_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_005046188.1\|3590645_3592238_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.3
WP_001253950.1\|3592227_3593733_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	7.9e-100	53.3
WP_000256823.1\|3593769_3594117_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
WP_000522661.1\|3594174_3595203_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.3e-111	59.8
WP_000201507.1\|3595254_3595623_+	hypothetical protein	NA	NA	NA	NA
WP_001204201.1\|3595615_3595969_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	4.6e-43	70.9
WP_000975009.1\|3595983_3596559_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.1e-48	56.8
WP_000683082.1\|3596555_3596951_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.7e-57	81.7
WP_046891750.1\|3596958_3597711_+	Ig-like domain-containing protein	Q687F6	Enterobacteria_phage	8.7e-132	97.2
WP_000479095.1\|3597724_3598156_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
WP_000533402.1\|3598182_3598596_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000082392.1\|3598576_3601150_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	84.4
WP_000847298.1\|3601146_3601476_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_005046106.1\|3601475_3602174_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	6.6e-126	94.8
WP_005046104.1\|3602184_3602928_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.0e-145	96.8
WP_064717329.1\|3602825_3603506_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	6.9e-112	98.7
WP_046891749.1\|3603848_3607322_+	DUF1983 domain-containing protein	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.7
WP_001228313.1\|3607389_3607989_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	4.1e-108	97.0
WP_000216492.1\|3608139_3610944_+\|tail	prophage tail fiber N-terminal domain-containing protein	Q858V4	Yersinia_virus	7.5e-03	65.0
WP_046891741.1\|3611961_3613500_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-293	99.0
WP_000612610.1\|3613548_3613896_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|3613892_3614273_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000937505.1\|3615698_3615956_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	5.1e-15	70.2
WP_001026780.1\|3615966_3616512_-	serine acetyltransferase	NA	NA	NA	NA
WP_001261938.1\|3616828_3617077_-	DinI-like family protein	B6DZC1	Enterobacteria_phage	7.0e-38	98.8
WP_005031165.1\|3617591_3619277_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	4.3e-304	99.5
WP_000598642.1\|3619273_3619993_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|3620039_3620510_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_005042702.1\|3623826_3625860_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	8.0e-55	27.8
WP_001005448.1\|3625991_3627101_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_072059034.1\|3628146_3628422_+	DUF2574 family protein	NA	NA	NA	NA
WP_000677412.1\|3629350_3630025_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000153067.1\|3632843_3633182_-	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_000019944.1\|3634002_3634275_+	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_046891747.1\|3634497_3635286_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_046891746.1\|3635282_3636083_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_005031483.1\|3636147_3636966_+	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	5.0e-24	38.0
WP_000434038.1\|3637017_3637764_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000846236.1\|3638602_3639607_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	1.7e-13	29.4
WP_000858484.1\|3639603_3640881_-	nucleoside permease	NA	NA	NA	NA
WP_000129571.1\|3641137_3642190_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_000289785.1\|3642497_3643352_+	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_000182920.1\|3644652_3645105_+	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000490651.1\|3646200_3647556_+	galactitol permease IIC component	NA	NA	NA	NA
WP_000844202.1\|3647603_3648644_+	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_000178555.1\|3648743_3649523_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000807369.1\|3649604_3650504_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	8.8e-14	29.5
WP_001318299.1\|3650909_3651227_+	hypothetical protein	NA	NA	NA	NA
WP_000476014.1\|3651557_3652919_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.9e-217	99.7

DBSCAN-SWA_18

3734075 : 3840325

Escherichia_phage(21.21%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171769612.1\|3734075_3735303_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.1e-176	98.7
WP_010723108.1\|3735695_3735758_+	membrane protein YoeI	NA	NA	NA	NA
WP_000019197.1\|3735747_3737106_+	putrescine/proton symporter PlaP	NA	NA	NA	NA
WP_000492322.1\|3737284_3738343_+	transport protein YeeE	NA	NA	NA	NA
WP_000985273.1\|3738356_3738584_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_000980542.1\|3738626_3740054_-	exodeoxyribonuclease I	NA	NA	NA	NA
WP_001302630.1\|3740177_3740336_-	hypothetical protein	NA	NA	NA	NA
WP_001105385.1\|3741546_3742020_+	DNA gyrase inhibitor SbmC	NA	NA	NA	NA
WP_001200876.1\|3742217_3743276_+	FUSC family protein	NA	NA	NA	NA
WP_000450409.1\|3743447_3743777_+	DUF496 family protein	NA	NA	NA	NA
WP_024259628.1\|3743877_3744060_-	ethanolamine utilization protein	NA	NA	NA	NA
WP_167544914.1\|3744684_3745898_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	7.1e-168	99.0
WP_000255950.1\|3746425_3747448_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	8.6e-199	98.8
WP_167544908.1\|3747529_3748758_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.8e-177	99.0
WP_000973150.1\|3750986_3751532_+	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_005042779.1\|3751528_3752272_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_001166156.1\|3752283_3753363_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_000986350.1\|3753424_3754360_+	L,D-transpeptidase	NA	NA	NA	NA
WP_046891742.1\|3754818_3755736_+	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
WP_001010986.1\|3755837_3756788_+	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_001060236.1\|3761785_3763240_-	AMP nucleosidase	NA	NA	NA	NA
WP_094096479.1\|3767678_3768835_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_001302302.1\|3775650_3776448_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001117462.1\|3779240_3779510_+	DNA-binding protein	A0A2I6PIE5	Escherichia_phage	4.1e-15	61.3
WP_000693856.1\|3779506_3779932_+	hypothetical protein	NA	NA	NA	NA
WP_024259707.1\|3780003_3781074_+	hypothetical protein	A0A088CD36	Shigella_phage	3.8e-64	65.7
WP_001151146.1\|3781114_3781537_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	3.9e-65	90.7
WP_001266147.1\|3781533_3781839_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.1e-48	94.1
WP_000335375.1\|3781825_3782281_+	ead/Ea22-like family protein	Q5G8U8	Enterobacteria_phage	1.4e-28	69.6
WP_046891741.1\|3782330_3783869_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-293	99.0
WP_000612610.1\|3783917_3784265_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000477609.1\|3784261_3784498_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	1.3e-36	98.7
WP_005069274.1\|3784752_3785169_+	hypothetical protein	A0A076GCN9	Escherichia_phage	1.5e-24	72.0
WP_000935258.1\|3785763_3785976_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	6.6e-29	95.7
WP_000929754.1\|3786143_3786422_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.4e-10	43.8
WP_000902849.1\|3788990_3789536_+\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	1.6e-74	74.7
WP_000551126.1\|3790779_3791403_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	5.4e-79	76.5
WP_001039895.1\|3791402_3791582_+	hypothetical protein	NA	NA	NA	NA
WP_046891740.1\|3791582_3793226_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_000239881.1\|3794317_3794986_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_046891739.1\|3795125_3796718_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-171	61.0
WP_000624671.1\|3796748_3797099_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_000435415.1\|3797095_3797515_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.9e-36	77.3
WP_094096507.1\|3797985_3799154_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_171764904.1\|3800589_3801817_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.5e-176	98.7
WP_153933124.1\|3802157_3803314_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_001007759.1\|3803531_3804182_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_001241113.1\|3804438_3805074_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_000740102.1\|3805074_3806079_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_000920127.1\|3806187_3806601_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_001339045.1\|3806733_3807405_+	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000826750.1\|3807404_3808763_+	two-component system sensor histidine kinase HprS	Q8QKV7	Ectocarpus_siliculosus_virus	6.6e-05	20.3
WP_114142771.1\|3811867_3812395_-	porin	Q1MVN1	Enterobacteria_phage	1.7e-36	47.0
WP_167544908.1\|3812458_3813686_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.8e-177	99.0
WP_072135367.1\|3814843_3815209_+	permease	NA	NA	NA	NA
WP_000365569.1\|3815248_3815944_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	5.6e-08	27.8
WP_001157235.1\|3816010_3817429_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.0e-101	55.1
WP_000786008.1\|3817409_3817880_+	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	4.4e-33	47.6
WP_001212273.1\|3817868_3818789_-	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000922682.1\|3818961_3819879_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_000009307.1\|3819957_3820140_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_077897541.1\|3820310_3822005_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	8.5e-18	35.1
WP_000491513.1\|3822001_3822817_-	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_000844800.1\|3823114_3823342_-	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000867217.1\|3823504_3823693_+	protein DsrB	NA	NA	NA	NA
WP_024259586.1\|3823736_3824345_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_000187358.1\|3826210_3826480_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_001253451.1\|3826489_3827152_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_004982751.1\|3827151_3827517_-	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001282098.1\|3827519_3827933_-	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_005040713.1\|3827929_3828934_-	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_000133228.1\|3828938_3829403_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_001123475.1\|3829507_3830662_-	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_001282673.1\|3831884_3832571_-	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000067936.1\|3832563_3833559_-	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_000994403.1\|3833551_3834721_-	flagellar M-ring protein FliF	NA	NA	NA	NA
WP_001274295.1\|3834935_3835250_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_001070456.1\|3835583_3835916_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_000734031.1\|3837199_3837751_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_129592877.1\|3839168_3840325_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.4e-66	44.7

DBSCAN-SWA_19

3871858 : 3955725

Escherichia_phage(31.37%)

head,holin,tail,transposase,tRNA,lysis,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094096479.1\|3871858_3873015_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_129592854.1\|3874144_3875311_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	9.9e-183	99.0
WP_000122426.1\|3875873_3876302_-	universal stress protein UspC	NA	NA	NA	NA
WP_046891733.1\|3878134_3879022_+	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_000795952.1\|3879018_3879945_+	flagellar motor protein MotB	NA	NA	NA	NA
WP_000147298.1\|3881641_3882145_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_046891732.1\|3882289_3883705_+	Tar ligand binding domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-10	35.0
WP_000204335.1\|3885311_3886172_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_000036408.1\|3886174_3887224_+	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	4.6e-06	33.6
WP_000763866.1\|3887238_3887628_+	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.0e-06	31.7
WP_000983609.1\|3887638_3888283_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_001259583.1\|3891539_3891932_+	flagellar protein FlhE	NA	NA	NA	NA
WP_001297434.1\|3892051_3892540_-	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
WP_001025342.1\|3892716_3894450_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_004982864.1\|3894665_3895232_+	VOC family protein	NA	NA	NA	NA
WP_001185757.1\|3895245_3895992_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001214302.1\|3897155_3898256_+	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_000564739.1\|3900873_3901845_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000019618.1\|3901841_3902585_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_094096507.1\|3903026_3904194_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_000061535.1\|3904537_3905362_+	helix-turn-helix domain-containing protein	A0A291AWW0	Escherichia_phage	4.7e-123	99.6
WP_000055050.1\|3905358_3905847_+	PerC family transcriptional regulator	U5P0U0	Shigella_phage	2.7e-86	97.5
WP_000066914.1\|3905846_3906500_+	phage N-6-adenine-methyltransferase	Q8SBE9	Shigella_phage	1.2e-126	99.1
WP_001061419.1\|3906905_3907715_+	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.3e-149	98.1
WP_005041034.1\|3907722_3908712_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.2e-194	98.8
WP_001204806.1\|3908729_3909110_+	antitermination protein Q	S5M7R9	Escherichia_phage	4.9e-67	100.0
WP_000024336.1\|3909674_3910724_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.0e-183	89.6
WP_000874453.1\|3911525_3911759_+	DUF1737 domain-containing protein	A0A0P0ZBH7	Stx2-converting_phage	1.3e-30	84.4
WP_000323228.1\|3911792_3913487_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	S5MDQ7	Escherichia_phage	4.9e-199	61.7
WP_000142784.1\|3913622_3913757_+	DUF1378 family protein	S5MBZ5	Escherichia_phage	3.1e-16	93.2
WP_094096479.1\|3913797_3914954_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_001289722.1\|3915109_3915379_+	DUF826 domain-containing protein	A0A2R2Z348	Escherichia_phage	8.2e-08	74.2
WP_000284492.1\|3915454_3915670_+\|holin	class II holin family protein	G9L6J5	Escherichia_phage	1.0e-32	98.6
WP_000193278.1\|3915674_3916019_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.8e-37	95.2
WP_000369850.1\|3915984_3916257_-	hypothetical protein	NA	NA	NA	NA
WP_000992061.1\|3916362_3916896_+	lysozyme	Q6H9V6	Enterobacteria_phage	1.3e-94	92.1
WP_000675931.1\|3917116_3917230_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
WP_001082565.1\|3917231_3917699_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	1.1e-73	95.5
WP_000828072.1\|3918037_3918364_+	TonB family protein	H6WZK5	Escherichia_phage	3.4e-56	98.1
WP_000095744.1\|3918495_3918696_-	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	1.3e-29	97.0
WP_000829198.1\|3918737_3919103_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	6.2e-59	93.4
WP_001487956.1\|3919393_3919954_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	6.4e-71	83.9
WP_005041499.1\|3919950_3921612_+\|terminase	terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	98.4
WP_001063100.1\|3923656_3923878_+	hypothetical protein	B6DZA0	Enterobacteria_phage	1.9e-34	97.3
WP_000126030.1\|3926242_3926569_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	1.2e-53	99.1
WP_001018521.1\|3926578_3926929_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.7e-58	98.3
WP_000569977.1\|3926925_3927372_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	4.9e-74	97.3
WP_000133373.1\|3927368_3927713_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	2.1e-56	98.2
WP_024259601.1\|3927777_3928134_+	hypothetical protein	A0A0P0ZDV1	Stx2-converting_phage	4.5e-54	99.1
WP_114142276.1\|3928857_3929271_+	immunoglobulin domain-containing protein	A0A0P0ZDV1	Stx2-converting_phage	1.5e-64	99.2
WP_000710953.1\|3929285_3929660_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	3.0e-64	99.2
WP_128566924.1\|3929755_3929965_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	4.4e-33	97.1
WP_000224021.1\|3930012_3930273_+	hypothetical protein	NA	NA	NA	NA
WP_077897571.1\|3930407_3932009_-\|transposase	IS66-like element ISEc49 family transposase	A0A218MNE7	uncultured_virus	7.7e-77	36.4
WP_000950648.1\|3932015_3932408_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_000042910.1\|3932394_3932724_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_046891730.1\|3932768_3936029_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	96.6
WP_005046106.1\|3936361_3937060_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	6.6e-126	94.8
WP_005046104.1\|3937070_3937814_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.0e-145	96.8
WP_064717329.1\|3937711_3938392_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	6.9e-112	98.7
WP_001233150.1\|3942174_3942774_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	9.7e-110	98.0
WP_000216457.1\|3942838_3944398_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0P0ZGT8	Escherichia_phage	2.2e-68	98.5
WP_000539253.1\|3944483_3944996_+	receptor recognizing protein Gp38	A0A0P0ZFL3	Escherichia_phage	1.1e-85	92.9
WP_001114260.1\|3945071_3945284_+	DUF4376 domain-containing protein	Q9LA61	Enterobacterial_phage	7.1e-15	63.6
WP_005042757.1\|3945590_3946787_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001217553.1\|3947340_3947589_-	DinI-like family protein	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
WP_000530012.1\|3947685_3947862_+	hypothetical protein	NA	NA	NA	NA
WP_005026374.1\|3948317_3949514_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000891627.1\|3949704_3949959_-	isochorismatase family protein	NA	NA	NA	NA
WP_001258662.1\|3950267_3952040_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_001300367.1\|3952157_3952610_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_000907247.1\|3952638_3953379_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000974711.1\|3953413_3953935_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_005029473.1\|3953936_3954089_-	hypothetical protein	NA	NA	NA	NA
WP_171769613.1\|3954496_3955725_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	3.7e-172	96.7

DBSCAN-SWA_20

3998304 : 4058511

Stx2-converting_phage(34.78%)

protease,integrase,tRNA,transposase

attL 3994426:3994440|attR 4019961:4019975

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3994426:3994440	attL	NA	NA	NA	NA
WP_171769614.1\|3998304_3999533_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_046891729.1\|3999638_4000460_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000976476.1\|4000472_4000814_+	YebY family protein	NA	NA	NA	NA
WP_071821702.1\|4001206_4001677_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	6.6e-37	50.3
WP_129592854.1\|4003511_4004678_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	9.9e-183	99.0
WP_001333468.1\|4005142_4005523_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|4005519_4005867_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000099181.1\|4005915_4007454_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_001277359.1\|4007610_4007907_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-41	83.5
WP_005029490.1\|4007884_4009825_-	exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	1.9e-186	57.0
WP_001063816.1\|4010474_4011602_+\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_167544914.1\|4011835_4013048_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	7.1e-168	99.0
WP_001171522.1\|4013269_4013650_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.5e-65	98.4
WP_000612610.1\|4013646_4013994_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_046891728.1\|4014883_4015303_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	1.4e-35	76.3
WP_046891741.1\|4015387_4016926_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-293	99.0
WP_000612626.1\|4016974_4017322_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_001333468.1\|4017318_4017699_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_024259614.1\|4018949_4019573_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	2.1e-78	75.9
WP_001039895.1\|4019572_4019752_+	hypothetical protein	NA	NA	NA	NA
WP_000026175.1\|4019752_4021468_-	T3SS effector E3 ubiquitin-protein ligase IpaH3	NA	NA	NA	NA
4019961:4019975	attR	NA	NA	NA	NA
WP_171769615.1\|4022492_4023705_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-164	97.3
WP_000457842.1\|4024180_4024372_-	YebW family protein	NA	NA	NA	NA
WP_001295499.1\|4024476_4024713_-	DUF1480 family protein	NA	NA	NA	NA
WP_005024823.1\|4024830_4026270_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_005042252.1\|4026349_4028983_-	lipid-binding membrane homeostasis protein YebT	NA	NA	NA	NA
WP_024259618.1\|4028951_4030235_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001043888.1\|4030364_4030862_+	L-methionine (R)-S-oxide reductase	NA	NA	NA	NA
WP_000431370.1\|4030958_4031657_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_024259617.1\|4031676_4033725_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
WP_000984517.1\|4033916_4034798_+\|protease	protease HtpX	NA	NA	NA	NA
WP_001127216.1\|4034843_4036217_-	MFS transporter	NA	NA	NA	NA
WP_001262182.1\|4036393_4037185_+	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_001211011.1\|4037327_4037567_-	hypothetical protein	NA	NA	NA	NA
WP_000714550.1\|4037725_4037869_+	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
WP_001006852.1\|4037943_4038231_+	YebO family protein	NA	NA	NA	NA
WP_001295496.1\|4039556_4039700_+	YobF family protein	NA	NA	NA	NA
WP_001062678.1\|4039712_4039922_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
WP_000010113.1\|4040087_4040897_+	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_001296134.1\|4040893_4041460_-	manganese efflux pump MntP	NA	NA	NA	NA
WP_000156259.1\|4041887_4042346_-	DUF986 domain-containing protein	NA	NA	NA	NA
WP_000228655.1\|4042400_4043252_-	PTS mannose transporter subunit IID	NA	NA	NA	NA
WP_000406926.1\|4043264_4044065_-	PTS mannose transporter subunit IIC	NA	NA	NA	NA
WP_000150543.1\|4044127_4045099_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_046891727.1\|4045561_4047118_+	CNNM family cation transport protein YoaE	A0A0R6PEZ3	Moraxella_phage	4.6e-42	45.8
WP_129592899.1\|4048573_4049730_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_000624300.1\|4050681_4052046_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_000456725.1\|4052229_4052808_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_000855021.1\|4052811_4054173_-	aminodeoxychorismate synthase component 1	S4VT78	Pandoravirus	5.8e-41	33.4
WP_000457334.1\|4054246_4054426_+	YoaH family protein	NA	NA	NA	NA
WP_005042226.1\|4055371_4055716_-	RidA family protein	NA	NA	NA	NA
WP_000128834.1\|4055847_4057758_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	5.9e-92	31.9
WP_001220988.1\|4057815_4058511_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA

DBSCAN-SWA_21

4095833 : 4233065

105

Enterobacteria_phage(25.0%)

tRNA,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153933128.1\|4095833_4097372_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-292	98.8
WP_000373055.1\|4098333_4099677_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_000085238.1\|4099912_4100185_+	YnjH family protein	NA	NA	NA	NA
WP_000781878.1\|4100150_4100558_-	CTP pyrophosphohydrolase	NA	NA	NA	NA
WP_004983358.1\|4100644_4101256_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_001299561.1\|4102638_4103292_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.8e-14	29.7
WP_165850853.1\|4103291_4103945_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_000524080.1\|4105976_4106525_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_000977129.1\|4106524_4107232_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_000673918.1\|4109582_4110389_-	exodeoxyribonuclease III	NA	NA	NA	NA
WP_000081975.1\|4110834_4112055_+	succinylornithine/acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	4.2e-27	27.6
WP_000989446.1\|4112051_4113086_+	arginine N-succinyltransferase	NA	NA	NA	NA
WP_000994988.1\|4114541_4115885_+	N-succinylarginine dihydrolase	NA	NA	NA	NA
WP_000368526.1\|4115877_4116846_+	succinylglutamate desuccinylase	NA	NA	NA	NA
WP_001228966.1\|4117175_4117646_+	ATP-independent periplasmic protein-refolding chaperone	NA	NA	NA	NA
WP_046891726.1\|4117848_4118424_+	environmental stress-induced protein Ves	NA	NA	NA	NA
WP_000252396.1\|4118383_4119271_-	excinuclease Cho	NA	NA	NA	NA
WP_000175034.1\|4119500_4120328_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	7.7e-73	54.9
WP_001039044.1\|4120529_4120868_+	osmotically-inducible lipoprotein OsmE	NA	NA	NA	NA
WP_000412169.1\|4121165_4121486_+	PTS N,N'-diacetylchitobiose transporter subunit IIB	NA	NA	NA	NA
WP_001010702.1\|4124297_4125689_-	cystine/sulfocysteine:cation symporter	NA	NA	NA	NA
WP_004983374.1\|4125821_4126412_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000106834.1\|4126574_4127243_-	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_000222172.1\|4127389_4127926_+	YniB family protein	NA	NA	NA	NA
WP_000267654.1\|4127966_4128827_-	fructosamine kinase family protein	NA	NA	NA	NA
WP_000146159.1\|4128932_4129223_-	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_000251738.1\|4129323_4130253_-	6-phosphofructokinase II	NA	NA	NA	NA
WP_001144196.1\|4131802_4133731_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.6e-129	37.3
WP_032155788.1\|4133734_4134277_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	8.2e-15	32.9
WP_001124225.1\|4134373_4134571_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_000124850.1\|4134623_4134980_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_001386830.1\|4135102_4135147_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_000018583.1\|4135429_4136413_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	3.2e-33	38.0
WP_000672350.1\|4136427_4138815_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_001229265.1\|4138819_4139119_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_000078916.1\|4139422_4139563_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_171769616.1\|4139914_4141142_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	7.2e-176	98.7
WP_032324284.1\|4141113_4141350_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_046891725.1\|4141485_4142589_-	hypothetical protein	NA	NA	NA	NA
WP_000005370.1\|4146897_4148082_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.4e-223	98.5
WP_114142759.1\|4148120_4148990_+	tagaturonate reductase	A0A0A7NPV8	Enterobacteria_phage	1.0e-06	62.5
WP_005025442.1\|4149186_4150101_+	hypothetical protein	NA	NA	NA	NA
WP_024258604.1\|4150104_4150863_-	trans-aconitate 2-methyltransferase	NA	NA	NA	NA
WP_000483770.1\|4150925_4152272_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_001074427.1\|4152325_4152709_+	hypothetical protein	NA	NA	NA	NA
WP_000753022.1\|4152720_4153089_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	3.1e-26	57.9
WP_001264267.1\|4153075_4153663_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	1.6e-72	75.5
WP_000287959.1\|4154062_4154749_+	Ig-like domain-containing protein	A0A291AWU6	Escherichia_phage	8.8e-115	94.3
WP_000478929.1\|4154807_4155194_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.0e-60	90.6
WP_000371977.1\|4155502_4158544_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	84.8
WP_000447385.1\|4158543_4158873_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.9e-55	93.5
WP_001152578.1\|4158872_4159571_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.8e-124	91.8
WP_000194737.1\|4159575_4160319_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.8e-145	94.7
WP_001233102.1\|4165241_4165841_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	5.5e-105	93.5
WP_024259614.1\|4167142_4167766_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	2.1e-78	75.9
WP_001039895.1\|4167765_4167945_+	hypothetical protein	NA	NA	NA	NA
WP_005031414.1\|4167945_4169697_-	T3SS effector E3 ubiquitin-protein ligase IpaH2	NA	NA	NA	NA
WP_001397278.1\|4170811_4170937_+	hypothetical protein	NA	NA	NA	NA
WP_046891724.1\|4171025_4172486_+	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	7.3e-42	29.3
WP_000214712.1\|4172521_4172725_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
WP_046891723.1\|4172902_4173589_-	DNA-binding transcriptional regulator YdfH	NA	NA	NA	NA
WP_000636571.1\|4173677_4174424_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_000210377.1\|4174560_4176606_+	peptidyl-dipeptidase Dcp	NA	NA	NA	NA
WP_094096479.1\|4177979_4179136_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_000428998.1\|4179656_4180187_+	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
WP_000731833.1\|4180431_4180605_+	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_001320773.1\|4180676_4180826_-	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_001098564.1\|4181224_4182865_+	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_032335682.1\|4182902_4183832_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000013794.1\|4184041_4185385_+	VOC family protein	NA	NA	NA	NA
WP_000375956.1\|4185609_4187265_+	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_004983724.1\|4187404_4187629_+	YdcH family protein	NA	NA	NA	NA
WP_000140882.1\|4187691_4188228_+	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_004983796.1\|4189325_4190318_+	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_000586728.1\|4190314_4190908_+	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_171769617.1\|4192204_4193418_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.3e-164	97.0
WP_134805288.1\|4195135_4196363_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001333468.1\|4198332_4198713_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612626.1\|4198709_4199057_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000099181.1\|4199105_4200644_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000680280.1\|4200890_4202504_+	murein tripeptide ABC transporter substrate-binding protein MppA	NA	NA	NA	NA
WP_000559900.1\|4202554_4203586_-	low conductance mechanosensitive channel YnaI	NA	NA	NA	NA
WP_000605090.1\|4204606_4204864_+	DUF2534 family protein	NA	NA	NA	NA
WP_001262123.1\|4204913_4205864_-	universal stress protein UspE	NA	NA	NA	NA
WP_000611911.1\|4206015_4206768_-	fumarate/nitrate reduction transcriptional regulator Fnr	NA	NA	NA	NA
WP_000945012.1\|4206962_4207478_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	8.3e-25	42.8
WP_001156464.1\|4209050_4210496_-	p-aminobenzoyl-glutamate hydrolase subunit AbgB	NA	NA	NA	NA
WP_000444944.1\|4210495_4211806_-	p-aminobenzoyl-glutamate hydrolase subunit AbgA	NA	NA	NA	NA
WP_000885469.1\|4211981_4212890_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001046837.1\|4213219_4213783_+	DNA endonuclease SmrA	NA	NA	NA	NA
WP_000628065.1\|4213803_4215036_-	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
WP_000387388.1\|4215290_4216274_+	zinc transporter ZntB	NA	NA	NA	NA
WP_000123759.1\|4216750_4218124_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_001157397.1\|4218252_4219188_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.2e-144	98.1
WP_153933131.1\|4220633_4221802_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.2e-181	98.7
WP_012421537.1\|4221970_4222636_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_000882658.1\|4222806_4223019_+	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	1.2e-25	88.6
WP_000687450.1\|4223268_4223478_+	hypothetical protein	NA	NA	NA	NA
WP_094096479.1\|4223529_4224685_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	44.7
WP_000640137.1\|4224741_4225296_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.3e-68	69.7
WP_089519923.1\|4227690_4227873_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_167544910.1\|4229119_4230333_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.3e-164	97.0
WP_000435423.1\|4230675_4231095_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.2e-35	75.3
WP_000624671.1\|4231091_4231442_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_046891721.1\|4231472_4233065_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-171	61.0

DBSCAN-SWA_22

4251165 : 4283446

Stx2-converting_phage(23.08%)

integrase,transposase

attL 4262199:4262223|attR 4292525:4292549

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_134805288.1\|4251165_4252394_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_046891798.1\|4252425_4253031_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_005041006.1\|4253030_4253612_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_000627388.1\|4256021_4257338_+	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA
WP_000048944.1\|4257388_4257994_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_000139622.1\|4258194_4262097_+	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
4262199:4262223	attL	NA	NA	NA	NA
WP_001333468.1\|4262315_4262696_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|4262692_4263040_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_000099204.1\|4263088_4264627_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.3e-294	99.0
WP_001027927.1\|4265593_4266394_+	YdcF family protein	NA	NA	NA	NA
WP_000115910.1\|4266590_4268030_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_094112601.1\|4268852_4269994_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.1e-66	44.7
WP_171769618.1\|4270031_4271244_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.6e-167	98.6
WP_001151410.1\|4271501_4271780_-	hypothetical protein	NA	NA	NA	NA
WP_000904672.1\|4271876_4272185_+	helix-turn-helix domain-containing protein	A0A0M5M1I9	Salmonella_phage	1.3e-22	53.1
WP_000336262.1\|4272273_4273212_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	4.3e-80	50.8
WP_000668483.1\|4273214_4273577_+	hypothetical protein	NA	NA	NA	NA
WP_000997174.1\|4273684_4274014_+	hypothetical protein	NA	NA	NA	NA
WP_001154172.1\|4275263_4275815_+	bifunctional thioredoxin/glutathione peroxidase	NA	NA	NA	NA
WP_000029458.1\|4275814_4276564_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	1.0e-07	27.2
WP_001209786.1\|4276641_4277106_+	C40 family peptidase	A0A217EQL1	Bacillus_phage	1.1e-12	35.3
WP_001300634.1\|4277352_4278066_+	anti-FlhDC factor	NA	NA	NA	NA
WP_000175699.1\|4278128_4279565_+	YdiU family protein	NA	NA	NA	NA
WP_001270810.1\|4279568_4279760_-	hemin uptake protein HemP	NA	NA	NA	NA
WP_001082226.1\|4279891_4280938_-	3-deoxy-7-phosphoheptulonate synthase AroH	S4W5F1	Pandoravirus	3.2e-84	47.7
WP_000368051.1\|4281094_4281928_-	posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR	NA	NA	NA	NA
WP_088895425.1\|4282218_4283446_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
4292525:4292549	attR	NA	NA	NA	NA

DBSCAN-SWA_23

4532583 : 4600539

Escherichia_phage(43.33%)

portal,holin,lysis,tail,terminase,integrase,transposase,protease,head,capsid

attL 4537304:4537318|attR 4607908:4607922

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000422066.1\|4532583_4533633_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	3.0e-21	31.5
WP_000559290.1\|4533852_4534611_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	2.0e-06	23.9
WP_001291216.1\|4535238_4536111_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_005041692.1\|4536321_4538217_-	DUF2207 domain-containing protein	NA	NA	NA	NA
4537304:4537318	attL	NA	NA	NA	NA
WP_001295575.1\|4538244_4538865_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001285651.1\|4538861_4539743_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001386774.1\|4539880_4539925_+	trp operon leader peptide	NA	NA	NA	NA
WP_046891713.1\|4540016_4541579_+	anthranilate synthase component I	NA	NA	NA	NA
WP_000763539.1\|4541578_4543174_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	1.7e-52	38.5
WP_000983895.1\|4543174_4544536_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	5.6e-36	39.8
WP_000209505.1\|4544547_4545741_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_000443080.1\|4545740_4546547_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000251936.1\|4548028_4548199_-	hypothetical protein	A0A0U2RK60	Escherichia_phage	9.4e-10	62.5
WP_000240999.1\|4548638_4549307_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000885580.1\|4549361_4549946_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-102	94.3
WP_032335670.1\|4549945_4552921_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	2.7e-51	88.0
WP_001228225.1\|4552985_4553585_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	3.7e-101	91.5
WP_000515473.1\|4553652_4557132_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.4
WP_153933134.1\|4557198_4557537_-	hypothetical protein	NA	NA	NA	NA
WP_050546148.1\|4557609_4558212_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	6.8e-87	84.7
WP_000140710.1\|4558148_4558892_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.1e-146	96.0
WP_001152648.1\|4558896_4559595_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.6e-132	98.7
WP_000847332.1\|4559594_4559924_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.6e-59	99.1
WP_046891712.1\|4559920_4562494_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	85.2
WP_000533402.1\|4562474_4562888_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000479095.1\|4562914_4563346_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
WP_001454438.1\|4563359_4563965_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	7.6e-102	98.0
WP_000683079.1\|4563972_4564368_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000974980.1\|4564364_4564898_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.6e-58	66.7
WP_001204568.1\|4564913_4565267_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.3e-40	68.4
WP_000201502.1\|4565259_4565643_-	hypothetical protein	NA	NA	NA	NA
WP_000522588.1\|4565694_4566723_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.0e-114	61.9
WP_000256833.1\|4566780_4567128_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	7.5e-22	57.0
WP_128832178.1\|4567198_4568671_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	7.7e-100	53.3
WP_005046188.1\|4568660_4570253_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.3
WP_000259002.1\|4570249_4570456_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_024259736.1\|4570439_4572368_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	9.7e-260	66.6
WP_000867569.1\|4572339_4572888_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_153933135.1\|4573330_4573798_-\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	7.7e-70	91.0
WP_000992072.1\|4574096_4574630_-	lysozyme	Q6H9V6	Enterobacteria_phage	2.4e-99	94.4
WP_000369850.1\|4574735_4575008_+	hypothetical protein	NA	NA	NA	NA
WP_000193262.1\|4574973_4575318_-	YdfR family protein	K7PGU6	Enterobacteria_phage	6.3e-37	94.0
WP_000284510.1\|4575322_4575538_-\|holin	class II holin family protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000874316.1\|4577023_4578880_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	89.6
WP_000871291.1\|4579139_4579475_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_071782237.1\|4579545_4579758_+	hypothetical protein	NA	NA	NA	NA
WP_000226110.1\|4580223_4580364_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	2.2e-12	93.5
WP_153933136.1\|4580623_4581682_-	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	1.4e-199	94.9
WP_000762933.1\|4582256_4583078_-	antitermination protein	K7P7B9	Enterobacteria_phage	5.5e-79	60.1
WP_000904094.1\|4583074_4583449_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.4e-35	62.7
WP_001265099.1\|4583461_4584508_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.8e-109	54.8
WP_032335658.1\|4584509_4584788_-	hypothetical protein	A0A077KB22	Edwardsiella_phage	6.7e-05	37.1
WP_000980988.1\|4584854_4585106_-	hypothetical protein	NA	NA	NA	NA
WP_000967408.1\|4585322_4585535_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.1e-26	94.3
WP_000350274.1\|4585769_4586003_-	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	2.8e-36	100.0
WP_088895425.1\|4586017_4587246_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000207997.1\|4587445_4587613_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	2.1e-14	89.4
WP_000224216.1\|4587623_4587887_-	hypothetical protein	A0A2P0P958	Salmonella_phage	3.9e-31	73.6
WP_001142588.1\|4587888_4588107_-	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	3.6e-30	93.1
WP_000510389.1\|4588108_4588324_-	hypothetical protein	A0A222YWK2	Escherichia_phage	6.3e-35	93.0
WP_001289986.1\|4588324_4588684_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.7e-37	73.5
WP_000753053.1\|4588680_4588857_-	hypothetical protein	A0A2R2X2A8	Escherichia_phage	3.3e-26	93.1
WP_001224665.1\|4588849_4589032_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	9.1e-27	98.3
WP_000403782.1\|4589127_4589484_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.4e-58	99.2
WP_001209470.1\|4589461_4589923_-	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	1.3e-37	92.9
WP_001266130.1\|4589919_4590216_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	95.8
WP_001141099.1\|4590212_4590605_-	DUF977 family protein	A0A088CBK9	Shigella_phage	1.5e-39	63.3
WP_000450707.1\|4590620_4591391_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	6.7e-87	68.4
WP_001309414.1\|4591424_4591967_-	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	3.6e-79	90.2
WP_000020542.1\|4591878_4592919_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	2.3e-90	86.7
WP_000705383.1\|4592890_4593442_-	hypothetical protein	NA	NA	NA	NA
WP_000476986.1\|4593425_4593653_-	transcriptional regulator	NA	NA	NA	NA
WP_001003379.1\|4593730_4594138_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	7.2e-24	45.4
WP_000379596.1\|4594327_4594480_+	DUF1391 family protein	M4QQ57	Salicola_phage	2.3e-07	53.2
WP_005031383.1\|4594491_4594866_+	hypothetical protein	NA	NA	NA	NA
WP_032335657.1\|4596204_4596363_+	cell division inhibitor	NA	NA	NA	NA
WP_000199480.1\|4596359_4596548_+	DUF1482 family protein	NA	NA	NA	NA
WP_000048473.1\|4596643_4599118_+	exonuclease	A0A192Y6E0	Salmonella_phage	1.1e-58	58.2
WP_000113189.1\|4599182_4599431_+	excisionase	NA	NA	NA	NA
WP_000113688.1\|4599408_4600539_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	2.2e-102	51.1
4607908:4607922	attR	NA	NA	NA	NA

DBSCAN-SWA_24

4643395 : 4650295

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088895425.1\|4643395_4644624_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001146442.1\|4644729_4644960_-	putative cation transport regulator ChaB	A5IZT6	Spodoptera_litura_granulovirus	6.5e-06	40.0
WP_001295620.1\|4645229_4646330_+	sodium-potassium/proton antiporter ChaA	NA	NA	NA	NA
WP_000099181.1\|4646713_4648252_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|4648300_4648648_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|4648644_4649025_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000170926.1\|4649184_4649292_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_000811065.1\|4649440_4650295_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	8.3e-46	39.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045785

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 98550

Stx2-converting_phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114142767.1\|3924_5081_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-66	45.1
WP_000701115.1\|5418_6873_-	T3SS effector OspC family protein	NA	NA	NA	NA
WP_171769620.1\|7241_8455_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.3e-165	97.3
WP_012421703.1\|8506_10231_-	T3SS effector E3 ubiquitin-protein ligase IpaH4.5	NA	NA	NA	NA
WP_032490755.1\|10658_12356_-	T3SS effector E3 ubiquitin-protein ligase IpaH7.8	NA	NA	NA	NA
WP_046891828.1\|16706_17915_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000019158.1\|17895_18168_-	hypothetical protein	NA	NA	NA	NA
WP_001343187.1\|18570_20268_-	type III secretion system effector OspD3	NA	NA	NA	NA
WP_046891811.1\|20595_22008_-	type 3 secretion system effector OspC1	NA	NA	NA	NA
WP_001333468.1\|23084_23465_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612626.1\|23461_23809_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000099181.1\|23857_25396_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_001020414.1\|26163_27339_-	enterotoxin production-related protein TieB	NA	NA	NA	NA
WP_001100761.1\|27407_29669_-	TonB-dependent receptor	NA	NA	NA	NA
WP_000981088.1\|29837_30614_-	energy transducer TonB	NA	NA	NA	NA
WP_001224621.1\|30621_31497_-	ChaN family lipoprotein	NA	NA	NA	NA
WP_171769621.1\|32055_33402_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000124126.1\|34500_34866_+	hypothetical protein	NA	NA	NA	NA
WP_001063816.1\|36033_37161_+\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_001333468.1\|38985_39366_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612610.1\|39362_39710_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_046891815.1\|39758_41183_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.3e-266	92.0
WP_000624671.1\|41411_41762_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_000435424.1\|41758_42178_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	8.5e-36	76.3
WP_011114782.1\|42552_42705_+	hypothetical protein	NA	NA	NA	NA
WP_153933141.1\|44013_45741_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_000865087.1\|46756_47044_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.7e-40	88.4
WP_046891819.1\|47043_47355_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2I6TCA4	Escherichia_phage	1.4e-48	94.2
WP_153933142.1\|47819_49016_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000957714.1\|49387_49654_-	hypothetical protein	NA	NA	NA	NA
WP_001063816.1\|50556_51684_-\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_046891821.1\|52182_52971_+	AraC family invasion system transcriptional regulator VirF	NA	NA	NA	NA
WP_073691766.1\|52912_53335_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	8.5e-52	97.2
WP_153933143.1\|53825_54993_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.3e-182	99.3
WP_001063816.1\|55051_56179_-\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
WP_171769622.1\|56838_58067_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000607008.1\|58538_59177_-	hypothetical protein	NA	NA	NA	NA
WP_004967149.1\|59832_61434_-\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-148	61.5
WP_089519923.1\|61453_61636_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.5e-16	71.2
WP_000878030.1\|61910_62930_-\|transposase	IS110-like element ISEc11 family transposase	NA	NA	NA	NA
WP_005031011.1\|63239_63914_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	7.6e-10	30.1
WP_171769623.1\|64215_65428_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.1e-167	98.6
WP_073691216.1\|66170_67349_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.7e-28	32.1
WP_000431557.1\|68378_69359_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	8.5e-95	58.2
WP_000200287.1\|69358_70558_-	AAA family ATPase	Q71TL9	Escherichia_phage	2.0e-175	75.1
WP_004979576.1\|70695_70857_-	hypothetical protein	A0A0P0ZEB3	Stx2-converting_phage	3.9e-05	55.0
WP_024259653.1\|74952_75519_-	type III secretion effector IpgB2	NA	NA	NA	NA
WP_011114726.1\|75800_76115_-	hypothetical protein	NA	NA	NA	NA
WP_046891824.1\|76626_77304_-	type 3 secretion system effector OspD1	NA	NA	NA	NA
WP_000622995.1\|80117_80465_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.4e-46	75.7
WP_001077959.1\|82578_82866_-	hypothetical protein	NA	NA	NA	NA
WP_000868557.1\|84217_84796_+	hypothetical protein	NA	NA	NA	NA
WP_001121865.1\|85834_86554_+	type III secretion system effector phosphothreonine lyase	NA	NA	NA	NA
WP_005041841.1\|86985_88695_+	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA
WP_005008498.1\|88776_88974_-	hypothetical protein	NA	NA	NA	NA
WP_114142765.1\|92867_92954_+	hypothetical protein	NA	NA	NA	NA
WP_000850660.1\|93313_94054_-	PAP2 family phosphatase PhoN2	A0A1B1IUP6	uncultured_Mediterranean_phage	2.6e-11	28.9
WP_001046941.1\|94381_95248_-	type 3 secretion system effector OspB	A0A0P0ZCT1	Stx2-converting_phage	7.2e-29	35.3
WP_005041436.1\|97602_98550_-\|protease	omptin family outer membrane protease IcsP	NA	NA	NA	NA

DBSCAN-SWA_2

104367 : 176348

Stx2-converting_phage(28.57%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153933146.1\|104367_105576_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000701106.1\|106024_107479_-	type 3 secretion system effector OspC2	NA	NA	NA	NA
WP_153933147.1\|107903_108747_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_000957863.1\|109690_109879_+	hypothetical protein	NA	NA	NA	NA
WP_000130973.1\|114004_114862_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_001365705.1\|114854_114929_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_000083819.1\|115152_115413_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_000766818.1\|115652_116243_-	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_001299729.1\|116281_116491_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_001233866.1\|116536_116998_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	3.2e-20	37.7
WP_011379083.1\|117241_117454_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_005045523.1\|117584_118145_-	fertility inhibition protein FinO	NA	NA	NA	NA
WP_000205722.1\|118199_118946_-	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	5.4e-09	32.0
WP_171539520.1\|123822_124239_-	conjugative relaxase	NA	NA	NA	NA
WP_000450530.1\|124323_124551_+	toxin-antitoxin system antitoxin VapB	NA	NA	NA	NA
WP_000911318.1\|124550_124949_+\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
WP_000009311.1\|124957_127165_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_005027201.1\|128950_129895_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_005045525.1\|129959_130910_-	virulence factor VirK	NA	NA	NA	NA
WP_005027207.1\|130914_132003_-	putative hexosyltransferase CapU	NA	NA	NA	NA
WP_000931198.1\|132005_132848_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_004996477.1\|133211_133328_-	hypothetical protein	NA	NA	NA	NA
WP_000705599.1\|134245_134731_-	protein kinase	NA	NA	NA	NA
WP_000079956.1\|134982_135252_-	hypothetical protein	NA	NA	NA	NA
WP_000936802.1\|135459_137097_-	T3SS effector E3 ubiquitin-protein ligase IpaH9.8	NA	NA	NA	NA
WP_001159860.1\|137489_137795_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_000813626.1\|137796_138015_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_088895425.1\|138258_139486_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000019158.1\|139943_140216_+	hypothetical protein	NA	NA	NA	NA
WP_167544920.1\|140310_141523_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	8.2e-164	96.6
WP_050546159.1\|141587_142718_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000766699.1\|145039_145177_+	hypothetical protein	NA	NA	NA	NA
WP_000421262.1\|145308_145584_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001178088.1\|145583_145868_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_000435424.1\|147101_147521_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	8.5e-36	76.3
WP_000624671.1\|147517_147868_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	65.5
WP_046891721.1\|147898_149491_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-171	61.0
WP_046891833.1\|149847_150522_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	4.4e-10	30.8
WP_134806647.1\|151065_152233_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.9e-182	99.0
WP_046891834.1\|153251_154211_+	plasmid segregation protein ParM	A0A222YXF2	Escherichia_phage	4.2e-62	40.9
WP_000445931.1\|154210_154606_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_088895425.1\|154773_156002_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_073691780.1\|156094_156460_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_094096542.1\|156505_157349_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_000828661.1\|157521_158271_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_171769624.1\|159983_161196_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	7.9e-167	98.3
WP_094096743.1\|161355_162523_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.4e-182	99.0
WP_088895425.1\|162893_164121_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000099181.1\|164551_166090_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|166138_166486_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|166482_166863_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_046891837.1\|167467_169120_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
WP_171769625.1\|169460_170674_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	3.5e-167	98.6
WP_069375727.1\|171308_174617_-	outer membrane autotransporter IcsA	A0A2L1IV18	Escherichia_phage	3.9e-75	28.8
WP_046891839.1\|175145_176348_+\|protease	alpha-tubulin-specific protease	NA	NA	NA	NA

DBSCAN-SWA_3

185830 : 188142

Stx2-converting_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000099181.1\|185830_187369_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.8e-294	99.2
WP_000612610.1\|187417_187765_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.8e-61	99.1
WP_001333468.1\|187761_188142_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2

DBSCAN-SWA_4

218995 : 219925

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000227976.1\|218995_219925_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-51	42.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045784

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045785

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection