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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045816 Bacillus subtilis strain P5_B2 chromosome, complete genome 2 crisprs csa3,RT,cas3,DEDDh,WYL,DinG 0 1 14 0

Results visualization

1. NZ_CP045816
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045816_1 945424-945529 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045816_2 3066189-3066296 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_CP024037 Bacillus aryabhattai strain K13 plasmid unnamed2 10417-10476 7 0.883
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_CP026740 Bacillus megaterium strain YC4-R4 plasmid unnamed4 70764-70823 7 0.883
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NC_017139 Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence 1318-1377 7 0.883
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_CP010587 Bacillus megaterium Q3 plasmid p1, complete sequence 838-897 7 0.883
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_CP023319 Bacillus megaterium strain A plasmid p2, complete sequence 75825-75884 7 0.883
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NC_020451 Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence 1960-2019 9 0.85
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_CP015440 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence 64773-64832 12 0.8
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 483791-483850 13 0.783
NZ_CP045816_2 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder 3066213-3066272 60 NZ_LR134399 Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence 57361-57420 14 0.767

1. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

2. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

3. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

4. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

5. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.883

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatatttta-aagtggcggt	Protospacer
******************************************  *****   * ****.*

6. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 9, identity: 0.85

cagcttggaaggctgaggttttaccactaaactacacccgcaatttttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcattttagttatggcccggg	Protospacer
****************************************** ***   * ***  **. 

7. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 12, identity: 0.8

cagcttggaaggctgaggttttaccactaaactacacccgca-------atttttatttg	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcataataatatataccattg	Protospacer
******************************************       ** * .  ***

8. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 13, identity: 0.783

cagcttggaaggctgaggttttaccactaaactacacccgc--------aatttttattt	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatggttaaaagttttgcca	Protospacer
*****************************************        ** ****... 

9. spacer 2.1|3066213|60|NZ_CP045816|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 14, identity: 0.767

cagcttggaaggctgaggttttaccactaaactacacccgc---------aatttttatt	CRISPR spacer
cagcttggaaggctgtagttttaccactaaactacacccgcatagtaagtagttcttagt	Protospacer
*************** .************************         *.**.*** *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 150875 : 174534 37 Bacillus_phage(61.54%) capsid,tail,head,tRNA,integrase,portal,protease,terminase attL 147017:147031|attR 168122:168136
DBSCAN-SWA_2 178513 : 186806 9 Bacillus_phage(85.71%) holin,plate,tail NA
DBSCAN-SWA_3 705797 : 714163 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 738521 : 748996 7 Streptococcus_phage(42.86%) NA NA
DBSCAN-SWA_5 1216588 : 1260951 50 Planktothrix_phage(25.0%) coat,tRNA NA
DBSCAN-SWA_6 1341050 : 1375536 45 uncultured_Caudovirales_phage(32.35%) portal,holin,plate,terminase NA
DBSCAN-SWA_7 1807259 : 1868161 59 Bacillus_phage(66.67%) coat,tRNA,integrase,protease,terminase attL 1807063:1807079|attR 1818480:1818496
DBSCAN-SWA_8 2020651 : 2028678 9 Bacillus_phage(85.71%) holin NA
DBSCAN-SWA_9 2239840 : 2245935 8 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_10 2480310 : 2514988 50 uncultured_Caudovirales_phage(29.03%) holin,tail,plate,portal,terminase NA
DBSCAN-SWA_11 2568412 : 2667211 115 Bacillus_phage(41.86%) holin,tail,capsid,head,coat,tRNA,integrase,portal,protease,terminase attL 2607871:2607898|attR 2648933:2648960
DBSCAN-SWA_12 2689407 : 2780006 99 Bacillus_phage(35.0%) holin,tail,capsid,head,coat,tRNA,portal,protease,terminase NA
DBSCAN-SWA_13 3354660 : 3362395 9 Organic_Lake_phycodnavirus(50.0%) holin NA
DBSCAN-SWA_14 3730854 : 3806188 74 Bacillus_phage(26.67%) coat,tRNA,protease,bacteriocin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage