CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045815	Bacillus licheniformis strain P8_B2 plasmid pBs004, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP045814	Bacillus licheniformis strain P8_B2 chromosome, complete genome	1 crisprs	csa3,WYL,DinG,cas3,DEDDh,Cas14u_CAS-V	0	1	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045814_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045814_1

599105-599198

Orphan

Consensus_repeat	Method
GAAAAGGCGGAGAAGCCACAAGCCGCAACCATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045814_1

>merge|NZ_CP045814|1|599105-599198|CRISPRCasFinder
GAAAAGGCGGAGAAGCCACAAGCCGCAACCATGATAAAGAATTCTACCAAGAAATCGGTGAAAAGGGCGGAGAAGCCACAAGCCGCAACCATGA

>NZ_CP045814|1|1|599105-599198|CRISPRCasFinder
GAAAAGGCGGAGAAGCCACAAGCCGCAACCATGA	TAAAGAATTCTACCAAGAAATCGGTG
AAAAGGGCGGAGAAGCCACAAGCCGCAACCATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045814.1\|WP_003179106.1\|606821_607907_+\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234993
NZ_CP045814.1\|WP_016885172.1\|596846_598136_-\|Na+/H+-antiporter-NhaC-family-protein	unknown	unknown	gnl\|CDD\|224671
NZ_CP045814.1\|WP_017473961.1\|599477_600518_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|279875
NZ_CP045814.1\|WP_003179099.1\|605608_605764_-\|Fur-regulated-basic-protein-FbpB	unknown	unknown	gnl\|CDD\|380223
NZ_CP045814.1\|WP_003179069.1\|590064_590616_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP045814.1\|WP_003179091.1\|602119_603046_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP045814.1\|WP_011201564.1\|594204_595392_+\|glycosyl-transferase-family-1	unknown	unknown	gnl\|CDD\|273616
NZ_CP045814.1\|WP_003179089.1\|600805_602050_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP045814.1\|WP_009330142.1\|603923_604262_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045814.1\|WP_021837156.1\|604386_605535_+\|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl\|CDD\|224871
NZ_CP045814.1\|WP_003179104.1\|606340_606661_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP045814.1\|WP_003179102.1\|605766_605925_-\|Fur-regulated-basic-protein-FbpA	unknown	unknown	gnl\|CDD\|315692
NZ_CP045814.1\|WP_003179078.1\|595982_596807_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NZ_CP045814.1\|WP_009330151.1\|589741_589993_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045814.1\|WP_003179094.1\|603038_603806_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|378937
NZ_CP045814.1\|WP_016886461.1\|595417_595864_-\|DUF2188-domain-containing-protein	unknown	unknown	gnl\|CDD\|227213
NZ_CP045814.1\|WP_061576133.1\|598264_598981_+\|DUF4937-domain-containing-protein	unknown	unknown	gnl\|CDD\|374476
NZ_CP045814.1\|WP_003179070.1\|590670_591951_-\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|234815
NZ_CP045814.1\|WP_003179074.1\|592133_592382_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP045814.1\|WP_003179075.1\|592477_593899_-\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237743

Protein	Function_ID	Function_description	E-value
NZ_CP045814.1\|WP_003179106.1\|606821_607907_+\|D-alanine--D-alanine-ligase	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0
NZ_CP045814.1\|WP_016885172.1\|596846_598136_-\|Na+/H+-antiporter-NhaC-family-protein	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	1.18493e-69
NZ_CP045814.1\|WP_017473961.1\|599477_600518_+\|AI-2E-family-transporter	gnl\|CDD\|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	3.87582e-39
NZ_CP045814.1\|WP_003179099.1\|605608_605764_-\|Fur-regulated-basic-protein-FbpB	gnl\|CDD\|380223	NF033227, Fur_reg_FbpB, Fur-regulated basic protein FbpB. This model describes FbpB (Fur-regulated basic protein B), one of three paralogous small proteins recognized by Pfam model PF13040 in Bacillus subtilis.	7.53093e-13
NZ_CP045814.1\|WP_003179069.1\|590064_590616_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.62266e-32
NZ_CP045814.1\|WP_003179091.1\|602119_603046_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.22103e-94
NZ_CP045814.1\|WP_011201564.1\|594204_595392_+\|glycosyl-transferase-family-1	gnl\|CDD\|273616	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. [Cellular processes, Toxin production and resistance].	6.03872e-108
NZ_CP045814.1\|WP_003179089.1\|600805_602050_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	5.28175e-135
NZ_CP045814.1\|WP_021837156.1\|604386_605535_+\|acyl-CoA/acyl-ACP-dehydrogenase	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	5.61595e-61
NZ_CP045814.1\|WP_003179104.1\|606340_606661_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.38914e-26
NZ_CP045814.1\|WP_003179102.1\|605766_605925_-\|Fur-regulated-basic-protein-FbpA	gnl\|CDD\|315692	pfam13076, Fur_reg_FbpA, Fur-regulated basic protein A. This family of proteins is regulated by the ferric uptake regulator protein Fur. This family does not regulate the lutABC operon encoding iron sulfur-containing enzymes necessary for growth on lactate.	1.99588e-08
NZ_CP045814.1\|WP_003179078.1\|595982_596807_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	1.03443e-93
NZ_CP045814.1\|WP_003179094.1\|603038_603806_+\|ABC-transporter-permease-subunit	gnl\|CDD\|378937	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.78114e-09
NZ_CP045814.1\|WP_016886461.1\|595417_595864_-\|DUF2188-domain-containing-protein	gnl\|CDD\|227213	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown].	5.32201e-35
NZ_CP045814.1\|WP_061576133.1\|598264_598981_+\|DUF4937-domain-containing-protein	gnl\|CDD\|374476	pfam16291, DUF4937, Domain of unknown function (DUF4937. This family consists of uncharacterized proteins around 120 residues in length and is mainly found in various Bacillus species, such as Bacillus subtilis and Bacillus amyloliquefaciens. Several members are annotated as ydbC, but the specific function of this family is unknown.	5.47632e-45
NZ_CP045814.1\|WP_003179070.1\|590670_591951_-\|divalent-metal-cation-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	0
NZ_CP045814.1\|WP_003179074.1\|592133_592382_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	0.00363152
NZ_CP045814.1\|WP_003179075.1\|592477_593899_-\|aspartate-ammonia-lyase	gnl\|CDD\|237743	PRK14515, PRK14515, aspartate ammonia-lyase; Provisional.	0

>NZ_CP045814.1|WP_061576133.1|598264_598981_+|DUF4937-domain-containing-protein
MDRKTNLLELTKEVAEKHANFLVSEVNDHCMRIAVLEGEYVWHIHPGSDELFIVLEGELLIDFQDRPTEVLKANDSLLIPKGVIHRTRADVRSVNLCIEKTNAETVPFAEGNVLKLIRCKSAEQKLQAFSEAQAKWAPLQNVSGFIRQWGGWMETEDGPEAVVLVLWKSKHDYLNFMAEHHDEIYERTHQKGTFESINITLFEDPAEISETLQNNTPAPVPEWTVMGSGRLRDPHSLS
>NZ_CP045814.1|WP_016885172.1|596846_598136_-|Na+/H+-antiporter-NhaC-family-protein
MQNQNGKASGLLPLFLFVCLFVGSGLITGDFYSLPIVAAALAASVVSLAMNRKEKLSQKTEWFAKGAGHPDIMIMVMIFILAGAFSSAAKAMGAVESTVNLALSFVPGQFMVAGLFIIAAFISVSMGTSTGTIAALAPIAAGISAEIGVPAAYSVAAVVGGAMFGDNLSFISDTTIAAVRTQKTKMSDKFKTNFLIVLPAAVATVILLMVFSAGGHPGAQAGTYSWVKVLPYLGVLIFALLGFNVMAVIFGGIVLAGVIGISDGSLTLHTYLTAITEGIGGMSELIILSLLIGGMAEMMKRNGGIAFLLQFVSRRIRSKKGAEAGIAGLVSAANLATANNTIAIITAGSLAKDLSDRYGIDNRKSASILDIFSCAVQGLIPYGAQMLSAAQIAKISPVSILPYSFYPILIGVCGICAIIFRLPRFTEKA
>NZ_CP045814.1|WP_003179078.1|595982_596807_+|EcsC-family-protein
MRYDKTDLENELKKIEKWEKEQQKAWFWERIGRLPFKVLDKLTPAFIQDKIGLLLDEIGGFIQNGGQYLTSEKHLIRQFQKKLPDETIETIEDIQWAPLEVMDQICENLGKNRANTAAVQGATTGVGGLFTLAVDIPAILGLSLKTLQDIAVSYGYDPKEKTERMFIIKCLQLSAADIVGKRAIIQELSRYHQPSGSRENMISQIQGWREVVYTYRDSFGWKKLFQMVPVAGILFGAISNRSMVNGVAETGMMMYKKRRIMERLAELDATETEG
>NZ_CP045814.1|WP_016886461.1|595417_595864_-|DUF2188-domain-containing-protein
MPWSMEDYPASLKHLDKPVKKKAIEIANAMVDEGYDESRAIPIATSQAKEWADNRSKSELTSYAEKADETERGDSGSSSRPELAEKCEHVIKHEKGWAVKAEDAKRASEVKDTKAEAVERAKEIAENKGTAVVVHKKDGSVERKIRMN
>NZ_CP045814.1|WP_011201564.1|594204_595392_+|glycosyl-transferase-family-1
MMGHVLMINFPGEGHINPSIGVTKELQRRGESIVYYAVEEYAEKIKKTGAEVRLYPDFREVLSPGKKKEKMDFAEVVYNMSSKVNEIVQFIYREVKSESYDYVIYDHHFLAGKIIAEMLELPSVSLCTTFAMDEQFAKTFTPQGDLESSPYFEKLKGSLGELSERYPVSLDKPFDVFSCPGDITIVFTSRAFQPHAERFGSDYLFVGPSIASRQDPGSFPFAELEGETVIVISMGTIFNQQKELYHMCIEALKDFDGKVVMSVGKSTDPRDLGSIPDHFIVRPYIPQLEVLKQADVFVTHGGMNSTNEGLYFDTPLIVIPMGADQFFVADQVERTGAGIKLDKNELSPAVLQKTIKDMLENRSYKDDAAKIGRSLRNAGGYQKAADAVLELAGRK
>NZ_CP045814.1|WP_003179075.1|592477_593899_-|aspartate-ammonia-lyase
MDTKATRIEKDFLGEKEVPVDAYYGVQTMRAVENFPITGYQIDEELIKALAMVKKAAALANMDIKRLYKELGEVIVKAAGEIAEGLWHEHFIVDPIQGGAGTSMNMNTNEVIANRGLELLGKEKGDYFHLSPNTHVNMAQSTNDVFPTAIHLATLNHLKRLLSTMEHMLDAFRKKAAEFDSVIKMGRTHLQDAVPIRLGQEFEAYSRVIERDIQRIRQSQHHLYEVNMGATAVGTGLNADPRYIQNVVAHLSDISGYQLTGADHLVDATQNTDAYTEVSAALKVGMMNMSKIANDLRLMASGPRAGLAEIRLPPRQPGSSIMPGKVNPVMPELMNQIAFQVIGNDNTICLASEAGQLELNVMEPVLVFNLLQSIKIMNNGFRVFTDYCITGIEANEIRLKEFVEKSVGTITAVNPHLGYEAAARIAKEAIATGRSVRELCLLHDVLTEEELDLILDPYEMTHPGIAGASLLEE
>NZ_CP045814.1|WP_003179074.1|592133_592382_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MLGFLVSLIVAIVIGLIGGAIGGHGAPGSMVIGFIGAWIGHGLFGTWGPDIAGFAIFPAIIGAAILVFILNLIFRGRMGSQA
>NZ_CP045814.1|WP_003179070.1|590670_591951_-|divalent-metal-cation-transporter
MVSHDLSKHSQISKEAQDALDGKSKGFKRLLPFLGPAFIAAIAYIDPGNFATNIAAGSKYGYLLLWVILFSNIMALLIQSLSAKLGIATGKNLPEVAREEFPKPVSIGLWIQGELVVIATDLAEFIGAALGLYLLFGIPMLEASIIAAAGSFAILELQRRGVRPLEAAITGMLFIVVIAFAFQTFFAKPDIGSVLEGMFVPRFDGADSILLAAGILGATVMPHAIYLHSALTQRRVVGKTEAEKKKIFRFEFIDILIAMLIAGAINASMLIVAAALFYKNGIFVEDLDVAFSHFSSMVSPLSAVLFGVGLLTAGLSSSSVGTLSGDIIMQGFINFRIPLYLRRFITILPPIAIIASGVNPTTALVLSQVVLSFGIAFALIPLILFTSNKRIMGSLKNAKWITAVSWLIAALIVALNIFLIYDTFSG
>NZ_CP045814.1|WP_003179069.1|590064_590616_-|GNAT-family-N-acetyltransferase
MFKLMVRDDLYLKMLEPKDARAVYMQIQQSKDVLRKWLFWVDGTKQLEDTEAFIEESMKQAAANNGFQAGIWHQGQFAGIIGLHYINWINRTTSIGYWLGEPFQGKGMMTDACRALIDTLFSEYDLNRIEIRAAVQNVKSQAIPERLGFTKEGCLRQCEWLHDHFADHFVYGLLKEEYEARSK
>NZ_CP045814.1|WP_009330151.1|589741_589993_-|hypothetical-protein
MKVFILFYLWIVPLVIGLIFFRITQRTSFQKRFYPGYIMIGLAAAVFAVCYLIGQPYLGNFFGGTMLFGTLLPFMAAAMKKKK
>NZ_CP045814.1|WP_017473961.1|599477_600518_+|AI-2E-family-transporter
MAALIKFFQHPGVRRFSVFVVLAGVLYLFRSMMNLILLTFIFTFLMNRLENVIRGFLNRFIKVSQRLIISCLYAALAIALSIGGVVYYPVIVTQIQQLIKQGKYIASHPDSIPFLDMITGMFGDINLTSYLEKGLNFIYTYITDISTFGLQVVMSLVLSMFLLIEKDKVMSLMDKFKTSKIAIFYEEIAYFGKKFTRTFGKVLEAQFIIATINCALTTIALAIMGFPQLFGLAVMVFFLGLVPVAGVVLSLIPLSIIAYSIGGIAYIVSLVLVIMIVHAIEAYFLNPKLMSAKTELPIFFTFIVLIFSEHFIGIWGLIIGIPIFVFLLDILDVTNQEKNRTAGTRK
>NZ_CP045814.1|WP_003179089.1|600805_602050_+|dicarboxylate/amino-acid:cation-symporter
MKLATKIIIALLLGAVVGIILNVTSPDLFSKLNTFLFGPLGTIFLNLIKMLVVPIVFFSLTLGVAGLGDPKKLGRIGAKTISFFLITTAIAIIIGLVLALVIKPGTIGTYDTSAAEYSAQKAPSISDTLLNIIPTNPVQAMAEGNMLQIIAFSILVGLGITMLGKKADALLKVVEQGNDLMMYLVNLVMKFAPYGTFGLIAGAIGSQGWDAIKAMGLYMIVVILALFIHTIVTYGAAIALLAKRNPLTFFKDFSEVMLVAFSTSSSNATLPVSMDVAQRKLKVPEPISSFVQPLGATINMDGTAIMQGVATVFIAQVYGNDLSLTQLLMVVLTAVLASIGTAGVPGVGLIMLAMVLQTVGLPVEGIALILGIDRLLDMIRTAVNTTGDAACAVIVTETEKKHGKIEAPHSEVSV
>NZ_CP045814.1|WP_003179091.1|602119_603046_+|ABC-transporter-ATP-binding-protein
MTKQPVLHIENVDKIIDGKTILKDIRLTADEGEIIGLLGPNGSGKTTLIKLITGLIKMKSGSIVINGFPIDRQFEKAIQSVGAIVENPEFYPYLTGYENLKHYANMHAGIGRERLEEVISRVGLEDAAEDKVKTYSLGMKQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFREHLRELAEEEGTAILFATHLLKEVEDLCDRVVILQKGKIKSTVVLNQADEKQEKAMLEVQPHDKALQWLKDQGYEARTEKGLLAVKVEKAQIPALNQQLVANDIDVYSIAPFKQSLEDEYMARTNGIEERNADV
>NZ_CP045814.1|WP_003179094.1|603038_603806_+|ABC-transporter-permease-subunit
MFKLIQNEHVKLLKRKVTFVSLALIVVFQFLLALITKRILMGAGAEDHFIGYFSFTPNLNILLQGLSIVVAASIISFEYDKKTIKFLLIRPVRREKILVSKYVTSVLASIWLFIIYYGFSILFGLLFFGVKLDEKAEPLFINTVKMIGTQWFEVWMMVSFAFLCSALFKSSALSIMVSIVVLYGAKMLVTIMAYLEKPLGKFLLFANTDLTQYAGEAKPLFAGMTPLFSLFIVFIHLVFFLGTAWWGFCKRDMKV
>NZ_CP045814.1|WP_009330142.1|603923_604262_+|hypothetical-protein
MKKFITALPIVLLLSFSFVSFAFNFDHLVYFRLALGLFSLAGLFLLYKLKNGVRLFMAYLYGSWIVLAGIAAYEEPLFSDFFFGGLTITMGYLTYMLIYLGMKVDRRGGQAV
>NZ_CP045814.1|WP_021837156.1|604386_605535_+|acyl-CoA/acyl-ACP-dehydrogenase
MCSIFVKTERQQEWLDKIGKLADEFEKTAAYYDEHAQFPAEHIQKLRDSGYTALTVGKDYGGEGISLYDMLLFQERLAKGDGPTALSIGWHLSVMGELAEGNSWDRDVFSSLSHEALKGALINRAASEAQTGSPTRGGRPGTHAVKKNGGWIVNGRKTFTTMSPVLDYFLVTAWIEEKQMIGVFLIHKDAEGLAIEETWDMAAMRGTGSHDLVLTDVRLDESMLVELLAGKRTDKINGWLLHIPAVYLGIAQAARDYAVQFAKDYQPNSLKGPIKEVPAVQRHIGEIDLELMKARHFMYHVAELYDDPERRALLTGELGVVKHTVTNTAIAVVDKAMRVVGAKSLARTNPLQRFYRDVRAGLHNPPMDDATIAKLAGIAFSE
>NZ_CP045814.1|WP_003179099.1|605608_605764_-|Fur-regulated-basic-protein-FbpB
MSKRKIKTFHQLVEEYKKEIAKNPKEMEVIYDKIDRRHENRLLAISKAKQT
>NZ_CP045814.1|WP_003179102.1|605766_605925_-|Fur-regulated-basic-protein-FbpA
MAPQLKKAVEMRKKQLIQRLIQLGIYKKEERHLYELSLSELESEYQSIKKGG
>NZ_CP045814.1|WP_003179104.1|606340_606661_-|thioredoxin-family-protein
MKKITTEAQFNELIQSDKEIIVKFYADWCPDCTRMNMFIGDILEAYQENDWYELNKDDLPELADKYQVMGIPSLLIFKNGEKTGHLHSANAKTPEEVNEFLAEHIS
>NZ_CP045814.1|WP_003179106.1|606821_607907_+|D-alanine--D-alanine-ligase
MKTRLGLVYGGKSAEHNVSLQTALAVTKALDTEKFDIHPIYITEKGEWVRGPQLTEPVSNVKMLQFEQTGQTFSPAVLNRDMFPGEADAKEDSIDVVFPLLHGPNGEDGTIQGMLELLNVPYVGNGVLASSAGMDKVVMKHLFAQAGLDQAKYVSFLKKTWSQSKEECYAQVEGELGYPCFVKPANLGSSVGISKCRSREELDQAFELAFQYDRKIVVEEGVIGREIELGVLGNDEPVCSVAGEIAPKKDFYDYKAKYEDGDTDLIIPASLTEDEYETMRSMAVKAFQAIDGSGLVRADFFLTNEGRVLINEVNTMPGFTPFSMFPLLWKQSGVEYAELIEKLVALAIERHEEKQQIKHTF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045814_1	1.1\|599139\|26\|NZ_CP045814\|CRISPRCasFinder	599139-599164	26	NC_014025	Bacillus megaterium QM B1551 plasmid pBM500, complete sequence	20136-20161	1	0.962
NZ_CP045814_1	1.1\|599139\|26\|NZ_CP045814\|CRISPRCasFinder	599139-599164	26	NC_014023	Bacillus megaterium QM B1551 plasmid pBM700, complete sequence	73431-73456	2	0.923

1. spacer 1.1|599139|26|NZ_CP045814|CRISPRCasFinder matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 1, identity: 0.962

taaagaattctaccaagaaatcggtg	CRISPR spacer
taaagaattctaccaggaaatcggtg	Protospacer
***************.**********

2. spacer 1.1|599139|26|NZ_CP045814|CRISPRCasFinder matches to NC_014023 (Bacillus megaterium QM B1551 plasmid pBM700, complete sequence) position: , mismatch: 2, identity: 0.923

taaagaattctaccaagaaatcggtg	CRISPR spacer
caaagaattttaccaagaaatcggtg	Protospacer
.********.****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

157986 : 225428

Bacillus_phage(34.78%)

terminase,capsid,holin,portal,integrase,plate,tRNA,tail

attL 163211:163226|attR 199989:200004

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017474561.1\|157986_158730_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_003178393.1\|158890_159328_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_003178395.1\|159348_159741_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_009330341.1\|159791_160250_-	DNA damage-inducible protein DinB	NA	NA	NA	NA
WP_003178399.1\|160361_160805_+	YbaK family protein	NA	NA	NA	NA
WP_003178401.1\|160897_161611_+	N-acetylmuramoyl-L-alanine amidase CwlD	A0A0N9SGH1	Paenibacillus_phage	5.9e-13	31.4
WP_003178403.1\|161696_162758_+	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA
WP_003178405.1\|162811_163393_-	hypothetical protein	NA	NA	NA	NA
163211:163226	attL	NA	NA	NA	NA
WP_003178407.1\|163507_164107_+	kinB signaling pathway activation protein KbaA	NA	NA	NA	NA
WP_003178409.1\|164115_164880_-	polysaccharide deacetylase family sporulation protein PdaB	NA	NA	NA	NA
WP_061578214.1\|170419_171568_-\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	2.0e-50	31.0
WP_081112692.1\|171564_172155_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	2.3e-34	46.6
WP_061578216.1\|172159_172759_-	hypothetical protein	O64079	Bacillus_phage	1.6e-19	36.2
WP_081112693.1\|172859_173222_-	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	1.1e-10	50.8
WP_061578218.1\|173373_173607_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_061578219.1\|173637_173853_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_061578220.1\|173931_174450_+	helix-turn-helix transcriptional regulator	A0A290FZK9	Caldibacillus_phage	7.3e-37	47.6
WP_128474778.1\|174446_174713_+	hypothetical protein	NA	NA	NA	NA
WP_017474943.1\|174713_174902_+	hypothetical protein	NA	NA	NA	NA
WP_061578222.1\|175037_175232_+	hypothetical protein	NA	NA	NA	NA
WP_061578223.1\|175244_175460_+	hypothetical protein	NA	NA	NA	NA
WP_061578224.1\|175565_175754_+	hypothetical protein	NA	NA	NA	NA
WP_061578225.1\|175750_177739_+	hypothetical protein	A0A1L2K2K3	Aeribacillus_phage	7.1e-149	46.2
WP_061578227.1\|177978_178845_+	recombinase RecT	D7RWF9	Brochothrix_phage	7.5e-87	61.3
WP_061578228.1\|178841_179543_+	MBL fold metallo-hydrolase	A0A1L2JY21	Aeribacillus_phage	4.2e-96	69.1
WP_061578230.1\|179744_180545_+	hypothetical protein	I1W658	Staphylococcus_phage	6.2e-19	38.6
WP_017474951.1\|180547_180829_+	hypothetical protein	NA	NA	NA	NA
WP_075178027.1\|180803_182108_+	replicative DNA helicase	D2XR44	Bacillus_phage	4.8e-93	42.7
WP_075178301.1\|182140_182320_+	Fur-regulated basic protein FbpA	A0A1L2JY24	Aeribacillus_phage	8.7e-06	49.0
WP_075178028.1\|182427_182688_+	hypothetical protein	NA	NA	NA	NA
WP_061578243.1\|182824_183283_+	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	2.6e-54	70.5
WP_081375159.1\|183294_183750_+	hypothetical protein	NA	NA	NA	NA
WP_061578236.1\|183903_184110_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	2.9e-13	63.2
WP_061578237.1\|184282_184927_+	hypothetical protein	NA	NA	NA	NA
WP_064505123.1\|184961_186071_+	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	2.4e-53	33.1
WP_061578239.1\|186158_186542_+	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	6.8e-32	58.7
WP_128474780.1\|186723_187827_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	8.8e-48	31.9
WP_075178030.1\|188105_189992_+	hypothetical protein	A0A1P8CWI7	Bacillus_phage	9.8e-31	23.5
WP_065643576.1\|190010_190475_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_075178031.1\|191210_192701_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_075178032.1\|192855_193725_+\|terminase	terminase	D2IYW0	Enterococcus_phage	1.1e-37	43.3
WP_128474785.1\|193721_195017_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	1.2e-160	63.9
WP_075178034.1\|195020_196559_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	7.0e-144	51.1
WP_075178035.1\|196551_197421_+	hypothetical protein	A0A1B1P7D7	Bacillus_phage	4.8e-49	40.1
WP_075178036.1\|197541_198354_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_075178037.1\|198374_199031_+	hypothetical protein	NA	NA	NA	NA
WP_075178038.1\|199074_200250_+\|terminase	terminase	A0A1B1P7E4	Bacillus_phage	2.4e-83	53.1
199989:200004	attR	NA	NA	NA	NA
WP_075178039.1\|200262_201198_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	8.6e-105	63.8
WP_075178040.1\|201208_201622_+	hypothetical protein	NA	NA	NA	NA
WP_075178041.1\|201628_202024_+	DUF3199 family protein	A0A1B1P7D6	Bacillus_phage	2.2e-17	41.1
WP_075178042.1\|202020_202377_+	DUF3599 family protein	NA	NA	NA	NA
WP_075178043.1\|202373_202871_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	5.2e-40	47.2
WP_081375160.1\|202860_203325_+\|portal	phage portal protein	NA	NA	NA	NA
WP_075178044.1\|203325_203553_+	hypothetical protein	NA	NA	NA	NA
WP_044822157.1\|203553_204954_+\|portal	phage portal protein	A0A0A7RTT5	Clostridium_phage	5.7e-84	41.8
WP_075178045.1\|204955_205399_+\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	4.2e-25	44.1
WP_075178046.1\|205790_206240_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.1e-09	31.2
WP_085959894.1\|206269_206419_+	hypothetical protein	NA	NA	NA	NA
WP_075178047.1\|206422_211687_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	4.1e-50	41.8
WP_061578247.1\|211679_212339_+	LysM peptidoglycan-binding domain-containing protein	A0A090DBR9	Clostridium_phage	1.6e-25	33.3
WP_153915700.1\|212360_213344_+\|portal	phage portal protein	A0A1L6BY20	Clostridium_phage	1.3e-37	33.2
WP_043929393.1\|213340_213649_+	DUF2577 domain-containing protein	S6C459	Thermus_phage	2.0e-05	34.3
WP_075178049.1\|213661_214087_+	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	1.0e-12	43.4
WP_075178050.1\|214079_215123_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	7.5e-73	44.3
WP_075178051.1\|215109_215688_+	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	2.3e-15	29.6
WP_075178052.1\|215684_215960_+	hypothetical protein	NA	NA	NA	NA
WP_075178053.1\|215960_217064_+	hypothetical protein	M4ZRP1	Bacillus_phage	1.5e-18	65.9
WP_075178054.1\|217075_217405_+\|portal	phage portal protein	A0A2H4JCI0	uncultured_Caudovirales_phage	3.0e-12	39.4
WP_075178055.1\|217401_217584_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	6.3e-12	57.4
WP_075178056.1\|217685_218519_+	hypothetical protein	NA	NA	NA	NA
WP_017474918.1\|218601_218871_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	1.6e-24	61.8
WP_061578522.1\|218886_219150_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	8.8e-31	74.7
WP_128474787.1\|219201_220281_+	N-acetylmuramoyl-L-alanine amidase	A0A1P8CWN6	Bacillus_phage	1.1e-42	51.1
WP_153915703.1\|220288_220435_+	hypothetical protein	NA	NA	NA	NA
WP_128474789.1\|220702_220876_-	hypothetical protein	A0A1P8CWV7	Bacillus_phage	6.8e-24	90.9
WP_061577993.1\|220923_221733_-	ATP-dependent DNA ligase	O64130	Bacillus_phage	1.7e-96	61.0
WP_061577992.1\|222342_223155_+	hypothetical protein	NA	NA	NA	NA
WP_061577995.1\|223213_223534_-	YolD-like family protein	O64030	Bacillus_phage	1.0e-12	35.9
WP_017474059.1\|223997_224165_-	hypothetical protein	NA	NA	NA	NA
WP_003178412.1\|224258_225428_-	serine hydrolase	A0A2R4AS58	Mycobacterium_phage	2.9e-09	24.6

DBSCAN-SWA_2

756348 : 766272

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003179530.1\|756348_757644_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	5.9e-19	27.1
WP_061576038.1\|757718_758435_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	2.4e-46	42.4
WP_003179532.1\|758436_758691_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	8.0e-05	33.3
WP_003179533.1\|758687_759371_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_153915732.1\|759354_761583_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	2.5e-158	41.5
WP_003179536.1\|761558_762989_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.5e-52	32.9
WP_011197613.1\|763112_764153_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.7e-62	46.3
WP_003179538.1\|764149_764737_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-28	41.1
WP_003179539.1\|764733_766272_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.3e-77	52.0

DBSCAN-SWA_3

1323989 : 1396042

Bacillus_phage(25.0%)

coat,terminase,transposase,holin,portal,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009328811.1\|1323989_1324439_-\|coat	spore coat protein	NA	NA	NA	NA
WP_011197778.1\|1324589_1325078_-\|coat	spore coat protein	NA	NA	NA	NA
WP_009328809.1\|1325209_1325722_-\|coat	spore coat protein	NA	NA	NA	NA
WP_009328808.1\|1325792_1326191_-	hypothetical protein	NA	NA	NA	NA
WP_009328807.1\|1326239_1326626_-\|coat	spore coat protein	NA	NA	NA	NA
WP_011197779.1\|1326772_1327129_+	DUF1360 domain-containing protein	NA	NA	NA	NA
WP_009328806.1\|1327415_1327625_+	hypothetical protein	NA	NA	NA	NA
WP_011197781.1\|1327704_1327836_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_009328805.1\|1327965_1328223_+	sporulation protein	NA	NA	NA	NA
WP_153915745.1\|1328261_1330544_-	AAA family ATPase	A0A068EQC7	Bacillus_phage	3.0e-90	35.4
WP_016885900.1\|1330665_1330923_+	hypothetical protein	NA	NA	NA	NA
WP_009328801.1\|1330962_1331550_-	DedA family protein	NA	NA	NA	NA
WP_011197784.1\|1331645_1332632_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.6e-53	38.4
WP_009328799.1\|1332628_1333519_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.2e-84	55.6
WP_011197785.1\|1333541_1333937_-	GtrA family protein	NA	NA	NA	NA
WP_009328797.1\|1334101_1334521_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009328796.1\|1334530_1335040_-	hypothetical protein	NA	NA	NA	NA
WP_009328793.1\|1335104_1335827_-	esterase family protein	NA	NA	NA	NA
WP_011197786.1\|1335817_1336150_-	hypothetical protein	NA	NA	NA	NA
WP_011197787.1\|1336343_1336832_-	DNA damage-inducible protein DinB	NA	NA	NA	NA
WP_009328787.1\|1336912_1337860_-	YafY family transcriptional regulator	NA	NA	NA	NA
WP_009328785.1\|1338168_1339293_+	methionine biosynthesis PLP-dependent protein	A0A0B5JD48	Pandoravirus	5.3e-16	25.6
WP_009328782.1\|1339282_1340458_+	cystathionine beta-lyase	A0A0B5JD48	Pandoravirus	6.7e-22	29.3
WP_011197789.1\|1340503_1341694_-	DUF819 domain-containing protein	NA	NA	NA	NA
WP_011197790.1\|1341867_1342437_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_009328774.1\|1342426_1342711_+	hypothetical protein	NA	NA	NA	NA
WP_017474216.1\|1342886_1344260_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	3.8e-08	23.9
WP_009328769.1\|1344564_1345551_-	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_016885898.1\|1346152_1346236_-	hypothetical protein	NA	NA	NA	NA
WP_061565996.1\|1346674_1346854_+	hypothetical protein	NA	NA	NA	NA
WP_017474214.1\|1346887_1347466_+	maltose O-acetyltransferase	NA	NA	NA	NA
WP_017474213.1\|1347552_1347840_-	hypothetical protein	NA	NA	NA	NA
WP_017474212.1\|1348047_1348938_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011197796.1\|1349258_1351088_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA
WP_003180762.1\|1351115_1352834_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
WP_085959889.1\|1352906_1354069_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.5e-34	44.2
WP_003180765.1\|1354180_1355068_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003180767.1\|1355159_1356032_+	DMT family transporter	NA	NA	NA	NA
WP_003180768.1\|1356079_1356457_+	glyoxalase	NA	NA	NA	NA
WP_009328757.1\|1356500_1357049_-	hypothetical protein	NA	NA	NA	NA
WP_003180772.1\|1357501_1358236_+	LysM peptidoglycan-binding domain-containing protein	A0A217ER34	Bacillus_phage	4.2e-30	60.8
WP_011197798.1\|1358291_1359716_-	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	5.1e-16	24.6
WP_003180775.1\|1359731_1360310_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003180778.1\|1360322_1360658_-	hypothetical protein	NA	NA	NA	NA
WP_003180779.1\|1360686_1361100_-	hypothetical protein	NA	NA	NA	NA
WP_003180781.1\|1361474_1361957_-	DUF600 family protein	NA	NA	NA	NA
WP_009328750.1\|1361960_1364009_-	hypothetical protein	O64023	Bacillus_phage	1.9e-27	24.5
WP_003180784.1\|1364229_1364877_+	hypothetical protein	A0A0Y0AJU6	Bacillus_phage	4.1e-45	47.5
WP_003180785.1\|1364890_1365547_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	4.0e-40	49.7
WP_003180787.1\|1365735_1366089_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	2.7e-19	49.6
WP_003180788.1\|1366261_1366522_+	helix-turn-helix transcriptional regulator	S5MA07	Brevibacillus_phage	7.9e-08	41.2
WP_003180790.1\|1366511_1366808_+	hypothetical protein	NA	NA	NA	NA
WP_003180792.1\|1366808_1367639_+	hypothetical protein	S6BFM4	Thermus_phage	1.3e-27	31.0
WP_011197802.1\|1367538_1368339_+	ATP-binding protein	A6XMI1	Bacillus_virus	3.6e-59	48.1
WP_003180798.1\|1368609_1368951_+	hypothetical protein	NA	NA	NA	NA
WP_003180800.1\|1368947_1369151_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	1.9e-12	54.7
WP_003180803.1\|1369271_1369775_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	1.4e-21	38.7
WP_003180804.1\|1369917_1370718_+\|terminase	terminase	A0A0S2MVB6	Bacillus_phage	5.7e-65	51.4
WP_009328741.1\|1370714_1372013_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	7.2e-150	60.2
WP_003180808.1\|1372016_1373531_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	3.4e-143	55.5
WP_009328740.1\|1373538_1374387_+\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	2.1e-57	62.8
WP_009328739.1\|1374404_1375340_+\|portal	phage portal protein	A0A1B1P7E3	Bacillus_phage	1.1e-102	64.1
WP_011201613.1\|1375427_1375808_+	DUF3199 family protein	NA	NA	NA	NA
WP_009328738.1\|1375804_1376161_+	DUF3599 family protein	NA	NA	NA	NA
WP_003180822.1\|1376157_1376646_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	1.9e-34	44.6
WP_017474400.1\|1376658_1377099_+	hypothetical protein	NA	NA	NA	NA
WP_003180826.1\|1377099_1377324_+	hypothetical protein	NA	NA	NA	NA
WP_011197804.1\|1377323_1378670_+\|portal	phage portal protein	S5MNC1	Brevibacillus_phage	1.5e-78	40.2
WP_003180830.1\|1378671_1379115_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	2.1e-24	44.7
WP_003180832.1\|1379297_1379747_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	4.1e-12	38.7
WP_003180833.1\|1379788_1379926_+	hypothetical protein	NA	NA	NA	NA
WP_153915747.1\|1379929_1383595_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	1.7e-42	45.3
WP_003180838.1\|1383587_1384244_+	LysM peptidoglycan-binding domain-containing protein	A0A090DBR9	Clostridium_phage	4.0e-24	32.6
WP_003180841.1\|1384300_1385281_+	hypothetical protein	H7BV96	unidentified_phage	9.2e-41	32.3
WP_003180843.1\|1385277_1385586_+	DUF2577 domain-containing protein	S6C459	Thermus_phage	1.0e-06	37.3
WP_003180844.1\|1385604_1386030_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	5.4e-14	39.0
WP_003180847.1\|1386022_1387066_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	9.7e-73	44.3
WP_009328731.1\|1387052_1387973_+	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	5.0e-12	28.3
WP_003180850.1\|1387986_1388373_+	hypothetical protein	NA	NA	NA	NA
WP_011197807.1\|1388388_1389594_+	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	9.3e-27	48.3
WP_011197808.1\|1389638_1390598_+	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	1.2e-11	28.4
WP_011197809.1\|1390619_1390889_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	5.6e-25	66.3
WP_003180859.1\|1390903_1391167_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	5.3e-28	67.8
WP_009328730.1\|1391217_1392282_+	N-acetylmuramoyl-L-alanine amidase	S6BFI4	Thermus_phage	2.0e-44	50.8
WP_016885888.1\|1392383_1393061_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003180865.1\|1393083_1394100_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_017474398.1\|1394120_1395218_+	mannonate dehydratase	NA	NA	NA	NA
WP_009328728.1\|1395193_1396042_+	SDR family oxidoreductase	M1NMS3	Moumouvirus	5.6e-10	33.3

DBSCAN-SWA_4

2218272 : 2236458

Bacillus_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153915790.1\|2218272_2218863_-	hypothetical protein	A0A1P8CX67	Bacillus_phage	9.7e-86	80.6
WP_153915793.1\|2219062_2219512_-	DUF1768 domain-containing protein	A0A172JI41	Bacillus_phage	1.8e-47	65.5
WP_026579541.1\|2219822_2220179_-	hypothetical protein	NA	NA	NA	NA
WP_009328256.1\|2220237_2220411_-	hypothetical protein	O64190	Bacillus_phage	2.7e-20	89.5
WP_009328257.1\|2220675_2221020_-	hypothetical protein	O64111	Bacillus_phage	1.4e-31	60.4
WP_153915795.1\|2221117_2221318_+	small, acid-soluble spore protein, alpha/beta type	Q77YX0	Bacillus_phage	2.8e-21	83.3
WP_048355950.1\|2221405_2221984_-	hypothetical protein	R4JEY6	Bacillus_phage	1.0e-10	35.0
WP_095233904.1\|2222033_2222399_-	hypothetical protein	A0A1P8CX43	Bacillus_phage	3.8e-16	44.6
WP_080623981.1\|2222546_2223386_-	thymidylate synthase	U5J9N5	Bacillus_phage	8.4e-51	40.3
WP_153915797.1\|2223398_2224496_-	hypothetical protein	G3MBL0	Bacillus_virus	4.1e-114	54.8
WP_080623978.1\|2224497_2225055_-	hypothetical protein	G3MBK8	Bacillus_virus	5.2e-49	53.6
WP_080623977.1\|2225060_2225354_-	hypothetical protein	O64180	Bacillus_phage	7.5e-15	48.9
WP_153915799.1\|2225337_2225541_-	hypothetical protein	NA	NA	NA	NA
WP_017474732.1\|2225871_2226054_-	hypothetical protein	NA	NA	NA	NA
WP_080623975.1\|2226149_2226584_-	dUTP diphosphatase	A0A1P8CX51	Bacillus_phage	2.5e-70	88.7
WP_046132825.1\|2226627_2227062_-	hypothetical protein	NA	NA	NA	NA
WP_075223514.1\|2227051_2227381_-	hypothetical protein	NA	NA	NA	NA
WP_021837978.1\|2227421_2227589_-	hypothetical protein	NA	NA	NA	NA
WP_016885365.1\|2227588_2227837_-	NrdH-redoxin	A0A1P8CX24	Bacillus_phage	8.9e-25	65.8
WP_016885364.1\|2227859_2228597_-	hypothetical protein	A0A2I6UHL5	Bacillus_phage	7.3e-83	60.0
WP_021837976.1\|2228586_2229570_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4JMU8	Bacillus_phage	2.8e-146	79.9
WP_153915801.1\|2229610_2230594_-	DNA (cytosine-5-)-methyltransferase	D2IZY5	Enterococcus_phage	5.7e-99	57.6
WP_026579530.1\|2230926_2231175_-	hypothetical protein	NA	NA	NA	NA
WP_080666365.1\|2231391_2232774_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	3.1e-207	77.6
WP_021837970.1\|2232924_2233608_-	HNH endonuclease	L0LCB9	Bacillus_phage	9.3e-48	59.3
WP_035400091.1\|2233715_2234444_-	hypothetical protein	A0A217ER63	Bacillus_phage	1.3e-116	87.8
WP_021837968.1\|2234400_2234802_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	S6ANL8	Bacillus_phage	2.3e-38	64.0
WP_017474744.1\|2234801_2235149_-	hypothetical protein	O64171	Bacillus_phage	6.8e-15	41.7
WP_153915803.1\|2235201_2235462_-	hypothetical protein	NA	NA	NA	NA
WP_095266724.1\|2235891_2236026_-	hypothetical protein	O64168	Bacillus_phage	1.6e-12	79.5
WP_105179790.1\|2236039_2236252_-	DUF1653 domain-containing protein	A0A1P8CX21	Bacillus_phage	1.1e-28	80.0
WP_142782808.1\|2236266_2236458_-	hypothetical protein	S6BUY9	Bacillus_phage	3.6e-10	50.0

DBSCAN-SWA_5

2239543 : 2270506

Bacillus_phage(92.31%)

integrase

attL 2266985:2267002|attR 2275628:2275645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095291874.1\|2239543_2240344_-	site-specific DNA-methyltransferase	A0A2H4IZ65	uncultured_Caudovirales_phage	1.9e-76	56.0
WP_153915807.1\|2240362_2240503_-	hypothetical protein	NA	NA	NA	NA
WP_095291873.1\|2240600_2241185_-	hypothetical protein	A7KV03	Bacillus_phage	8.2e-29	38.6
WP_026579522.1\|2241508_2241724_-	hypothetical protein	NA	NA	NA	NA
WP_153915809.1\|2241728_2242445_-	hypothetical protein	O64147	Bacillus_phage	4.0e-41	43.3
WP_153915811.1\|2242455_2246385_-	DNA polymerase III subunit alpha	A0A1P8CX14	Bacillus_phage	0.0e+00	83.8
WP_145697310.1\|2246400_2248122_-	single-stranded-DNA-specific exonuclease RecJ	A0A1P8CX07	Bacillus_phage	2.2e-215	64.8
WP_145697312.1\|2248125_2249259_-	hypothetical protein	A0A1P8CX05	Bacillus_phage	3.0e-160	70.2
WP_145697314.1\|2249275_2250790_-	hypothetical protein	A0A1P8CWZ7	Bacillus_phage	3.1e-237	81.0
WP_145697317.1\|2250804_2251275_-	hypothetical protein	A0A1P8CX08	Bacillus_phage	1.3e-56	69.2
WP_073411032.1\|2251321_2252293_-	AAA family ATPase	A0A1P8CX29	Bacillus_phage	2.9e-156	85.0
WP_145697319.1\|2252346_2253258_-	hypothetical protein	A0A1P8CX09	Bacillus_phage	3.2e-112	67.3
WP_026579513.1\|2253340_2253673_-	hypothetical protein	A0A1P8CX10	Bacillus_phage	1.8e-17	50.5
WP_035400088.1\|2254182_2254686_+	hypothetical protein	NA	NA	NA	NA
WP_026579511.1\|2254711_2255050_+	hypothetical protein	NA	NA	NA	NA
WP_145697321.1\|2255089_2255740_-	hypothetical protein	NA	NA	NA	NA
WP_145697323.1\|2255821_2256076_-	hypothetical protein	NA	NA	NA	NA
WP_153915813.1\|2256116_2256830_-	serine/threonine protein phosphatase	A0A059T7C4	Listeria_phage	4.6e-42	39.1
WP_145697327.1\|2256830_2257070_-	hypothetical protein	NA	NA	NA	NA
WP_009328303.1\|2257106_2257349_-	hypothetical protein	NA	NA	NA	NA
WP_009328304.1\|2257345_2257540_-	hypothetical protein	R4JF30	Bacillus_phage	5.5e-30	98.4
WP_009328305.1\|2257536_2257725_-	hypothetical protein	A0A0A0RMX5	Bacillus_phage	4.1e-14	64.4
WP_009328306.1\|2257724_2258129_-	hypothetical protein	A0A2I6UHP7	Bacillus_phage	5.7e-21	53.7
WP_006640545.1\|2258246_2258609_-	hypothetical protein	NA	NA	NA	NA
WP_016885326.1\|2258605_2258830_-	hypothetical protein	O64132	Bacillus_phage	3.1e-21	63.4
WP_075646771.1\|2258923_2259736_+	ATP-dependent DNA ligase	O64130	Bacillus_phage	7.0e-119	76.2
WP_006640548.1\|2259745_2259994_-	hypothetical protein	NA	NA	NA	NA
WP_075646772.1\|2260828_2261041_-	hypothetical protein	NA	NA	NA	NA
WP_073425984.1\|2261261_2261453_-	hypothetical protein	A0A142F1P8	Bacillus_phage	1.8e-17	67.7
WP_073425983.1\|2261552_2261726_-	DNA strand exchange inhibitor protein	A0A1B1P7C0	Bacillus_phage	5.8e-15	73.7
WP_075646773.1\|2261752_2262097_-	hypothetical protein	NA	NA	NA	NA
WP_075223458.1\|2262143_2262341_-	hypothetical protein	NA	NA	NA	NA
WP_009328311.1\|2262871_2263054_-	hypothetical protein	NA	NA	NA	NA
WP_009328312.1\|2263073_2263742_-	DUF1273 family protein	A0A1P8CWY2	Bacillus_phage	5.8e-95	73.5
WP_009328313.1\|2263767_2263989_-	hypothetical protein	A0A217ER97	Bacillus_phage	2.0e-12	50.8
WP_075646775.1\|2264026_2264314_-	hypothetical protein	A0A0E3DEX0	Bacillus_phage	1.8e-16	49.5
WP_145736961.1\|2264366_2265521_-	AAA family ATPase	A0A223LDI7	Bacillus_phage	3.0e-67	39.7
WP_075646776.1\|2265601_2265826_-	hypothetical protein	NA	NA	NA	NA
WP_009328316.1\|2266132_2266327_-	hypothetical protein	NA	NA	NA	NA
WP_034291511.1\|2266339_2266594_-	hypothetical protein	NA	NA	NA	NA
WP_009328318.1\|2266962_2267964_-\|integrase	site-specific integrase	O64101	Bacillus_phage	4.8e-61	40.1
2266985:2267002	attL	NA	NA	NA	NA
WP_145697346.1\|2267967_2269344_-	hypothetical protein	O64100	Bacillus_phage	1.0e-93	42.4
WP_145697348.1\|2269411_2270506_-\|integrase	integrase	O64099	Bacillus_phage	2.7e-73	42.7
2275628:2275645	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2285176 : 2345300

Bacillus_phage(84.62%)

transposase,holin,integrase,tail

attL 2294299:2294314|attR 2326553:2326568

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075646788.1\|2285176_2286256_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3V0V2	Geobacillus_virus	3.9e-16	33.8
WP_075646789.1\|2286743_2286926_-	hypothetical protein	NA	NA	NA	NA
WP_009328351.1\|2287122_2287353_-	hypothetical protein	NA	NA	NA	NA
WP_021837916.1\|2287424_2287724_-	hypothetical protein	NA	NA	NA	NA
WP_009328352.1\|2287756_2288011_-	hypothetical protein	NA	NA	NA	NA
WP_017474468.1\|2288045_2288240_-	hypothetical protein	NA	NA	NA	NA
WP_017474469.1\|2288402_2288615_-	hypothetical protein	NA	NA	NA	NA
WP_073425966.1\|2288646_2289198_-	hypothetical protein	NA	NA	NA	NA
WP_021837913.1\|2289218_2289569_-	hypothetical protein	NA	NA	NA	NA
WP_153915817.1\|2290115_2290649_-	hypothetical protein	A0A0H3UZP0	Geobacillus_virus	2.0e-13	33.3
WP_145736938.1\|2290953_2292171_-	hypothetical protein	A0A1P8CWT6	Bacillus_phage	1.6e-191	81.2
WP_145736935.1\|2292873_2293194_-	hypothetical protein	NA	NA	NA	NA
WP_017474476.1\|2293190_2293469_-	hypothetical protein	NA	NA	NA	NA
2294299:2294314	attL	NA	NA	NA	NA
WP_080618478.1\|2294463_2294916_+	hypothetical protein	NA	NA	NA	NA
WP_075223470.1\|2294946_2297721_+	hypothetical protein	H7BV05	unidentified_phage	8.0e-106	29.5
WP_075223471.1\|2297717_2298518_+	hypothetical protein	NA	NA	NA	NA
WP_075223472.1\|2298623_2298899_+	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	1.2e-30	75.6
WP_075223473.1\|2299835_2300351_+	hypothetical protein	L0L915	Bacillus_phage	1.5e-34	48.6
WP_043928512.1\|2301001_2301205_+	hypothetical protein	A0A1P8CWT3	Bacillus_phage	7.8e-19	74.2
WP_075223474.1\|2301217_2302411_+	metallophosphoesterase	A0A0N9SK37	Staphylococcus_phage	4.1e-67	38.0
WP_021837898.1\|2302765_2303395_-	hypothetical protein	NA	NA	NA	NA
WP_021837897.1\|2303675_2304608_+	hypothetical protein	A0A1P8CWS6	Bacillus_phage	1.8e-139	76.4
WP_021837896.1\|2304591_2306361_+	hypothetical protein	O64069	Bacillus_phage	0.0e+00	91.9
WP_021837895.1\|2306378_2307899_+	hypothetical protein	O64068	Bacillus_phage	1.9e-247	83.0
WP_021837894.1\|2307932_2309351_+	hypothetical protein	A0A1P8CWR1	Bacillus_phage	8.1e-171	65.1
WP_021837893.1\|2309374_2309977_+	hypothetical protein	A0A1P8CWS2	Bacillus_phage	1.7e-77	82.4
WP_021837892.1\|2310017_2311034_+	hypothetical protein	A0A1P8CWR9	Bacillus_phage	1.2e-160	84.6
WP_009328375.1\|2311068_2311539_+	hypothetical protein	A0A1P8CWS5	Bacillus_phage	1.3e-69	80.8
WP_009328376.1\|2311550_2311949_+	hypothetical protein	A0A1P8CWR5	Bacillus_phage	2.2e-41	62.1
WP_009328377.1\|2311945_2312176_+	hypothetical protein	A0A1P8CWS7	Bacillus_phage	6.3e-09	52.8
WP_009328378.1\|2312162_2312822_+	hypothetical protein	A0A1P8CWR8	Bacillus_phage	3.7e-78	65.7
WP_021837890.1\|2312818_2313349_+	hypothetical protein	O64060	Bacillus_phage	1.5e-58	63.1
WP_009328380.1\|2313345_2314056_+	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	9.0e-38	38.6
WP_009328381.1\|2314087_2314921_+	hypothetical protein	A0A1P8CWR0	Bacillus_phage	4.2e-26	42.5
WP_021837889.1\|2314960_2315317_+	hypothetical protein	D6R3Z0	Bacillus_phage	3.5e-14	42.7
WP_145614593.1\|2315426_2315792_+	lysozyme	NA	NA	NA	NA
WP_075646805.1\|2317097_2317409_+	hypothetical protein	M4ZR44	Bacillus_phage	5.2e-14	45.2
WP_075646806.1\|2317405_2317597_+	XkdX family protein	NA	NA	NA	NA
WP_075646807.1\|2317634_2318120_+	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	3.6e-14	32.1
WP_075646808.1\|2318120_2318540_+	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	5.1e-41	57.0
WP_075646809.1\|2318553_2319555_+\|integrase	site-specific integrase	A0A1P8CWP6	Bacillus_phage	2.6e-171	86.5
WP_145699372.1\|2319674_2319869_+	hypothetical protein	NA	NA	NA	NA
WP_153915819.1\|2319865_2320768_-	hypothetical protein	NA	NA	NA	NA
WP_153915821.1\|2320949_2321564_-	hypothetical protein	NA	NA	NA	NA
WP_153915823.1\|2321704_2322166_+	hypothetical protein	NA	NA	NA	NA
WP_016886016.1\|2322935_2323676_-	hypothetical protein	NA	NA	NA	NA
WP_016886014.1\|2323999_2324695_+	hypothetical protein	Q37974	Bacillus_phage	3.5e-50	47.0
WP_016886013.1\|2324704_2324938_-	helix-turn-helix transcriptional regulator	A0A2I7SC34	Paenibacillus_phage	1.7e-09	51.6
WP_095233942.1\|2325325_2326903_+	hypothetical protein	NA	NA	NA	NA
2326553:2326568	attR	NA	NA	NA	NA
WP_017474508.1\|2326975_2327227_+	hypothetical protein	NA	NA	NA	NA
WP_026080824.1\|2327316_2328711_+\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	3.9e-101	53.6
WP_120155646.1\|2329347_2329581_+\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	4.6e-15	84.3
WP_026080825.1\|2329675_2334808_+\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	0.0e+00	60.5
WP_017474509.1\|2334863_2335625_+	hypothetical protein	A0A1P8CWP8	Bacillus_phage	5.1e-79	58.1
WP_051030486.1\|2335628_2338268_+	hypothetical protein	A0A1P8CWQ0	Bacillus_phage	1.2e-241	50.8
WP_017474511.1\|2338283_2339081_+	hypothetical protein	O64043	Bacillus_phage	2.8e-72	59.0
WP_095264092.1\|2339096_2341001_+	hypothetical protein	U5PWM6	Bacillus_phage	2.3e-51	35.3
WP_048349898.1\|2341157_2342246_+	N-acetylmuramoyl-L-alanine amidase	A0A1P8CWN6	Bacillus_phage	2.3e-109	68.1
WP_016886002.1\|2342377_2342764_+	hypothetical protein	A0A1P8CWP1	Bacillus_phage	4.0e-40	70.6
WP_021837857.1\|2342782_2343037_+\|holin	phage holin	A0A1P8CWN5	Bacillus_phage	1.0e-28	77.1
WP_048349897.1\|2343055_2343355_+	hypothetical protein	NA	NA	NA	NA
WP_003180750.1\|2343563_2343641_+	hypothetical protein	NA	NA	NA	NA
WP_080623910.1\|2344199_2345300_-	tetratricopeptide repeat protein	D6R410	Bacillus_phage	4.5e-28	26.5

DBSCAN-SWA_7

2511985 : 2524166

Staphylococcus_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003183104.1\|2511985_2512579_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.4e-14	37.6
WP_009327962.1\|2512568_2513324_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.4e-07	23.6
WP_003183108.1\|2513506_2513602_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_003183111.1\|2513722_2514244_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003183113.1\|2514254_2514629_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003183115.1\|2514730_2515195_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-45	70.7
WP_003183117.1\|2515229_2516426_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.1e-116	53.9
WP_017473932.1\|2516447_2517095_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.7e-39	41.5
WP_017473931.1\|2517106_2518195_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	6.6e-64	37.8
WP_003183123.1\|2518555_2518900_-	hypothetical protein	NA	NA	NA	NA
WP_011198084.1\|2519162_2521349_-	AAA family ATPase	A0A220BYT7	Staphylococcus_phage	1.4e-150	41.3
WP_003183127.1\|2521475_2521913_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_003183128.1\|2522071_2522377_-	hypothetical protein	NA	NA	NA	NA
WP_009327959.1\|2522366_2523497_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	1.4e-77	43.3
WP_003183133.1\|2523728_2524166_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	5.4e-17	44.6

DBSCAN-SWA_8

2926720 : 2996993

Bacillus_phage(33.33%)

protease,coat,terminase,transposase,integrase,tRNA

attL 2991048:2991073|attR 2997054:2997079

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016885541.1\|2926720_2927773_-\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_153915842.1\|2927888_2928998_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_009327769.1\|2929019_2929859_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_003184010.1\|2929839_2931414_-	L-aspartate oxidase	NA	NA	NA	NA
WP_003184013.1\|2931514_2932693_+	aminotransferase class V-fold PLP-dependent enzyme	A0A1X7QGF3	Faustovirus	1.2e-31	25.3
WP_003184015.1\|2932661_2933204_+	transcription repressor NadR	NA	NA	NA	NA
WP_003184017.1\|2933247_2934117_-	prephenate dehydratase	NA	NA	NA	NA
WP_003184018.1\|2934125_2934569_-	ACT domain-containing protein	NA	NA	NA	NA
WP_003184021.1\|2934682_2935969_-	GTPase ObgE	NA	NA	NA	NA
WP_003184022.1\|2936001_2936580_-	sporulation protein	NA	NA	NA	NA
WP_003184023.1\|2936805_2937087_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_003184025.1\|2937099_2937441_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003184027.1\|2937453_2937762_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_003184028.1\|2937918_2938785_-	stage IV sporulation protein FB	NA	NA	NA	NA
WP_044789852.1\|2938777_2939569_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_003184032.1\|2939714_2940143_+	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_003184034.1\|2940142_2940463_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003184035.1\|2940507_2941314_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_011198163.1\|2941316_2941997_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_003184039.1\|2942051_2942570_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003184040.1\|2942566_2943475_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003184042.1\|2943505_2944516_-	rod shape-determining protein	NA	NA	NA	NA
WP_003184045.1\|2944603_2945278_-	JAB domain-containing protein	NA	NA	NA	NA
WP_003184048.1\|2945332_2945905_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_003184050.1\|2946058_2947090_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_011198164.1\|2947293_2948043_-	prepilin peptidase	NA	NA	NA	NA
WP_017474374.1\|2948185_2949490_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_003184055.1\|2949565_2952208_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.8e-161	42.3
WP_003184058.1\|2952663_2952855_+	hypothetical protein	NA	NA	NA	NA
WP_009329292.1\|2952874_2953897_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_011198165.1\|2953924_2955298_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_059260978.1\|2955446_2956742_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_009329298.1\|2956767_2957742_-	porphobilinogen synthase	NA	NA	NA	NA
WP_044789850.1\|2957745_2958537_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_003184068.1\|2958526_2959468_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_003184070.1\|2959507_2960338_-	cytochrome c	NA	NA	NA	NA
WP_017474375.1\|2960343_2961705_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_003184074.1\|2961893_2962379_+	hypothetical protein	NA	NA	NA	NA
WP_003184076.1\|2962426_2963014_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_016885551.1\|2963010_2965335_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.0e-186	45.2
WP_003184080.1\|2965553_2967209_-\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	1.4e-17	35.7
WP_003184083.1\|2967391_2968657_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.2e-147	63.5
WP_003184085.1\|2968925_2970200_-	trigger factor	NA	NA	NA	NA
WP_017474376.1\|2970426_2971434_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003184088.1\|2971563_2972163_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_017474377.1\|2972175_2973594_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_003184091.1\|2973627_2974740_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_003184093.1\|2974767_2976324_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	2.5e-08	24.6
WP_003184095.1\|2976310_2977339_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_003184097.1\|2977362_2977881_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_003184100.1\|2977877_2979602_-	acetolactate synthase large subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	1.5e-62	30.2
WP_003184102.1\|2980024_2980939_-	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_003184104.1\|2981395_2981623_+	hypothetical protein	NA	NA	NA	NA
WP_003184106.1\|2981665_2983048_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_009329319.1\|2983460_2983715_+	hypothetical protein	NA	NA	NA	NA
WP_003184110.1\|2983758_2984250_-	hypothetical protein	NA	NA	NA	NA
WP_017474379.1\|2984263_2984464_-	hypothetical protein	NA	NA	NA	NA
WP_025808006.1\|2984685_2984901_-	hypothetical protein	A0A1B1P7C8	Bacillus_phage	4.1e-10	53.0
WP_059260972.1\|2986196_2987066_-\|terminase	terminase	D2IYW0	Enterococcus_phage	3.9e-35	40.4
WP_017474640.1\|2987111_2988116_-	hypothetical protein	NA	NA	NA	NA
WP_009329322.1\|2988606_2989380_-	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_026080840.1\|2989685_2990456_-	DNA (cytosine-5-)-methyltransferase	A0A1B1P7C6	Bacillus_phage	1.3e-87	63.1
WP_003184124.1\|2990464_2990821_-	hypothetical protein	A0A1B1P7B5	Bacillus_phage	1.8e-23	52.0
2991048:2991073	attL	NA	NA	NA	NA
WP_085959889.1\|2991184_2992347_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.5e-34	44.2
WP_009329324.1\|2992522_2993002_-	TIGR01741 family protein	NA	NA	NA	NA
WP_026699140.1\|2993007_2995002_-\|integrase	integrase	A0A1P8CWI7	Bacillus_phage	2.7e-15	23.6
WP_009329326.1\|2995196_2996387_+	tetratricopeptide repeat protein	D6R410	Bacillus_phage	5.6e-40	29.0
WP_003184137.1\|2996383_2996515_+	Phr family secreted Rap phosphatase inhibitor	NA	NA	NA	NA
WP_003184139.1\|2996609_2996993_-	ArpU family transcriptional regulator	A0A2H4J748	uncultured_Caudovirales_phage	5.4e-21	43.9
2997054:2997079	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3547765 : 3621111

Bacillus_phage(34.15%)

protease,coat,terminase,transposase,capsid,holin,portal,head,integrase,tRNA,tail

attL 3560307:3560324|attR 3605704:3605721

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017474576.1\|3547765_3548515_+\|tRNA	tRNA-dependent cyclodipeptide synthase	NA	NA	NA	NA
WP_003185271.1\|3548511_3549732_+	cytochrome P450, cyclodipeptide synthase-associated	NA	NA	NA	NA
WP_003185273.1\|3549728_3550184_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_003185275.1\|3550200_3550674_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_017474574.1\|3550796_3551975_-	amidase	NA	NA	NA	NA
WP_017474573.1\|3552164_3553214_+	oxidoreductase	NA	NA	NA	NA
WP_003185281.1\|3553245_3553881_-	FMN-dependent NADH-azoreductase 2	NA	NA	NA	NA
WP_003185283.1\|3554181_3555150_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_003185286.1\|3555345_3555555_-	hypothetical protein	NA	NA	NA	NA
WP_003185288.1\|3555538_3556120_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003185290.1\|3556276_3556426_+	YvrJ family protein	NA	NA	NA	NA
WP_003185292.1\|3556519_3557674_+	cupin domain-containing protein	NA	NA	NA	NA
WP_003185294.1\|3557746_3558145_+	peptidase	NA	NA	NA	NA
WP_003185296.1\|3558241_3558727_+	hypothetical protein	NA	NA	NA	NA
WP_011198290.1\|3558842_3559385_+	hypothetical protein	NA	NA	NA	NA
3560307:3560324	attL	NA	NA	NA	NA
WP_153915875.1\|3560856_3562386_+\|transposase	transposase	NA	NA	NA	NA
WP_144583132.1\|3562401_3562740_+	hypothetical protein	NA	NA	NA	NA
WP_003185310.1\|3563453_3564164_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_035334177.1\|3564371_3565223_+	DUF2202 domain-containing protein	NA	NA	NA	NA
WP_003185315.1\|3565378_3565972_+	cupin domain-containing protein	Q2I8C5	Bacillus_phage	6.4e-53	67.6
WP_003185317.1\|3566092_3567046_-	LysM peptidoglycan-binding domain-containing protein	A0A141HSE6	Bacillus_phage	1.6e-58	41.7
WP_011197884.1\|3567093_3567357_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	1.5e-30	74.7
WP_009329192.1\|3567372_3567642_-	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	1.4e-20	58.4
WP_011198303.1\|3567704_3567887_-	XkdX family protein	Q4ZA85	Staphylococcus_virus	3.0e-06	49.0
WP_071583926.1\|3567883_3568198_-	hypothetical protein	M4ZR44	Bacillus_phage	4.4e-13	43.0
WP_145599662.1\|3568209_3569580_-	DUF2479 domain-containing protein	M4ZRP1	Bacillus_phage	3.6e-67	45.2
WP_153915877.1\|3569600_3571556_-	hypothetical protein	D7NW65	Streptomyces_phage	2.3e-43	28.9
WP_153915879.1\|3571592_3573305_-	alkaline phosphatase	D6R400	Bacillus_phage	1.2e-221	66.6
WP_145737055.1\|3573317_3574154_-\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	3.6e-110	69.3
WP_153915881.1\|3574153_3578623_-\|tail	phage tail tape measure protein	A6M961	Geobacillus_virus	7.1e-72	42.6
WP_153915883.1\|3578830_3579193_-	hypothetical protein	NA	NA	NA	NA
WP_003185341.1\|3579246_3579864_-\|tail	tail protein	NA	NA	NA	NA
WP_003185344.1\|3579878_3580262_-	hypothetical protein	NA	NA	NA	NA
WP_006637249.1\|3580258_3580657_-	hypothetical protein	NA	NA	NA	NA
WP_003185349.1\|3580656_3580965_-\|head	phage head closure protein	NA	NA	NA	NA
WP_003185351.1\|3580954_3581257_-\|head,tail	phage gp6-like head-tail connector protein	A0A0S2GLH6	Bacillus_phage	1.2e-12	46.3
WP_003185353.1\|3581277_3581703_-	collagen-like protein	D6R3Z0	Bacillus_phage	9.3e-14	57.8
WP_025807602.1\|3581726_3583010_-\|capsid	phage major capsid protein	A0A288WG01	Bacillus_phage	1.3e-79	44.5
WP_035317290.1\|3583048_3583780_-\|protease	Clp protease ClpP	A0A2I7SCY8	Paenibacillus_phage	5.2e-57	53.7
WP_025807606.1\|3583724_3585035_-\|portal	phage portal protein	D6R3Y6	Bacillus_phage	3.8e-106	46.7
WP_025807608.1\|3585035_3585227_-	DUF1056 family protein	NA	NA	NA	NA
WP_153915885.1\|3585238_3586948_-\|terminase	terminase large subunit	A0A0S2GLF0	Bacillus_phage	2.7e-205	61.8
WP_026080867.1\|3586944_3587460_-\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	4.4e-34	46.4
WP_006637239.1\|3587689_3588064_-	HNH endonuclease	A0A1U7Q1S7	Geobacillus_virus	1.4e-29	51.7
WP_006637238.1\|3588090_3588405_-	hypothetical protein	NA	NA	NA	NA
WP_153915887.1\|3588391_3588952_-	hypothetical protein	NA	NA	NA	NA
WP_006637236.1\|3589149_3589377_-	hypothetical protein	NA	NA	NA	NA
WP_006637235.1\|3589593_3589818_-\|coat	spore coat protein	NA	NA	NA	NA
WP_071584222.1\|3590547_3590928_-	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	3.6e-41	69.9
WP_153915889.1\|3590924_3592280_-	DEAD/DEAH box helicase	S5MA26	Brevibacillus_phage	1.1e-177	66.1
WP_069500915.1\|3592269_3592554_-	VRR-NUC domain-containing protein	S5MUC8	Brevibacillus_phage	2.9e-19	57.8
WP_145837479.1\|3592851_3595263_-	hypothetical protein	A0A0A7RTG3	Clostridium_phage	3.6e-288	58.2
WP_153915891.1\|3595378_3597322_-	hypothetical protein	S5M5X4	Brevibacillus_phage	6.1e-262	68.4
WP_006637225.1\|3597327_3597573_-	hypothetical protein	NA	NA	NA	NA
WP_048406860.1\|3597634_3598201_-	DUF2815 family protein	S5MC21	Brevibacillus_phage	3.7e-74	73.8
WP_153915893.1\|3598233_3599406_-	DUF2800 domain-containing protein	S5MUB5	Brevibacillus_phage	1.9e-141	64.6
WP_153915895.1\|3599405_3599852_-	hypothetical protein	S5M5X1	Brevibacillus_phage	1.2e-08	41.1
WP_011198322.1\|3599946_3600189_-	hypothetical protein	NA	NA	NA	NA
WP_009330095.1\|3600276_3600543_-	hypothetical protein	Q9ZXC9	Bacillus_phage	2.7e-19	54.7
WP_003185396.1\|3600602_3600983_+	DUF2513 domain-containing protein	A0A2I7SCV0	Paenibacillus_phage	7.0e-21	41.6
WP_003185401.1\|3601488_3602043_-	hypothetical protein	A0A288WGQ2	Bacillus_phage	1.3e-31	42.7
WP_016886536.1\|3602100_3602289_-	hypothetical protein	NA	NA	NA	NA
WP_003185403.1\|3602420_3602609_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153915897.1\|3602605_3603400_-	ORF6N domain-containing protein	D7RWL7	Brochothrix_phage	1.3e-77	61.0
WP_003185407.1\|3603422_3603641_-	helix-turn-helix transcriptional regulator	Q8SBM9	Clostridium_phage	7.8e-17	61.1
WP_003185408.1\|3603817_3604456_+	LexA family transcriptional regulator	A0A2I7SCV6	Paenibacillus_phage	1.8e-45	47.7
WP_153915899.1\|3604526_3605621_+\|integrase	tyrosine-type recombinase/integrase	A0A1B2AQ00	Phage_Wrath	5.7e-100	53.1
WP_009329604.1\|3606172_3606646_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.0e-45	61.1
3605704:3605721	attR	NA	NA	NA	NA
WP_003185414.1\|3606757_3609061_-	ribonuclease R	Q0GXV6	Lactococcus_phage	6.9e-95	41.7
WP_003185416.1\|3609074_3609821_-	carboxylesterase	NA	NA	NA	NA
WP_003185418.1\|3609961_3610192_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_003185421.1\|3610362_3610647_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	5.8e-12	52.7
WP_085959538.1\|3610675_3610909_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_026080846.1\|3611061_3611463_+	transcriptional regulator	S6C481	Thermus_phage	6.5e-17	46.2
WP_011201739.1\|3611626_3612031_+	helix-turn-helix transcriptional regulator	S6C481	Thermus_phage	2.1e-15	49.5
WP_003185432.1\|3612078_3612756_-	ABC transporter permease	NA	NA	NA	NA
WP_009329611.1\|3612772_3613690_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009329612.1\|3613703_3614357_-	ABC transporter permease	NA	NA	NA	NA
WP_003185439.1\|3614378_3615518_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	8.6e-14	30.6
WP_003185442.1\|3615775_3616315_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_003185444.1\|3616361_3616994_-	NAAT family transporter	NA	NA	NA	NA
WP_009329613.1\|3617331_3617934_+	hypothetical protein	NA	NA	NA	NA
WP_017474709.1\|3617977_3619756_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_085959889.1\|3619949_3621111_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.5e-34	44.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage