CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP038657	Citrobacter freundii strain 565 plasmid p565_1, complete sequence	0 crisprs	csa3	0	0	1	0
NZ_CP038656	Citrobacter freundii strain 565 chromosome, complete genome	1 crisprs	DEDDh,cas3,PD-DExK,csa3,DinG,WYL	0	0	19	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

204371 : 256952

Escherichia_phage(39.13%)

integrase,transposase

attL 241994:242053|attR 258966:260986

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119505882.1\|204371_205286_+\|transposase	IS5 family transposase	A0A077SK28	Escherichia_phage	9.5e-173	98.7
WP_000900745.1\|205451_205769_+	hypothetical protein	NA	NA	NA	NA
WP_001371904.1\|205819_206227_-	hypothetical protein	NA	NA	NA	NA
WP_000285959.1\|206684_207356_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_001100610.1\|207400_207706_-	hypothetical protein	NA	NA	NA	NA
WP_000785965.1\|207728_208046_-	hypothetical protein	NA	NA	NA	NA
WP_076611902.1\|208267_209614_+\|transposase	ISNCY-like element ISLad2 family transposase	NA	NA	NA	NA
WP_000589340.1\|209672_210476_+	hypothetical protein	NA	NA	NA	NA
WP_000482601.1\|210489_211851_+	FRG domain-containing protein	NA	NA	NA	NA
WP_016239970.1\|212003_212444_+	hypothetical protein	NA	NA	NA	NA
WP_016239971.1\|212461_213268_+	hypothetical protein	NA	NA	NA	NA
WP_044704760.1\|213562_214966_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000130816.1\|214998_215703_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.8e-86	72.9
WP_000941305.1\|215789_216110_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	53.7
WP_000922628.1\|216155_217445_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	9.9e-168	71.4
WP_000065802.1\|217457_217883_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.7
WP_001066652.1\|217942_218770_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-43	37.2
WP_000927306.1\|218788_220267_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	7.3e-199	74.4
WP_000864986.1\|220758_221034_-	hypothetical protein	NA	NA	NA	NA
WP_001371914.1\|221174_221372_-	hypothetical protein	NA	NA	NA	NA
WP_000637193.1\|222358_222616_-	hypothetical protein	NA	NA	NA	NA
WP_001005009.1\|222689_223004_-	hypothetical protein	NA	NA	NA	NA
WP_000975181.1\|223051_223948_-	hypothetical protein	NA	NA	NA	NA
WP_031942328.1\|223950_224466_-	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
WP_000833382.1\|224680_226108_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
WP_000078514.1\|226358_227678_+	DUF1173 family protein	NA	NA	NA	NA
WP_001572381.1\|227957_229163_-	hypothetical protein	NA	NA	NA	NA
WP_044704764.1\|229159_229978_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_000019951.1\|230443_230716_-	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_001572377.1\|230838_231954_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000723070.1\|232211_232646_-	hypothetical protein	NA	NA	NA	NA
WP_004248839.1\|232863_234210_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	8.8e-18	26.6
WP_074129341.1\|234248_235217_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.5e-184	98.8
WP_044704969.1\|235405_237028_+	MCR-9 family phosphoethanolamine--lipid A transferase	NA	NA	NA	NA
WP_044704902.1\|239118_239370_-	hypothetical protein	NA	NA	NA	NA
WP_153983901.1\|239476_239647_-	hypothetical protein	NA	NA	NA	NA
WP_024266332.1\|239931_240561_-	hypothetical protein	NA	NA	NA	NA
WP_032489926.1\|241024_241900_-	class A extended-spectrum beta-lactamase CTX-M-9	A0A1B0VBP7	Salmonella_phage	2.3e-152	99.3
241994:242053	attL	NA	NA	NA	NA
WP_000050481.1\|242226_243768_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000259031.1\|244172_245012_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|245005_245353_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001261740.1\|245516_246308_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_032490158.1\|246412_246886_-	trimethoprim-resistant dihydrofolate reductase DfrA16	G3MBI7	Bacillus_virus	1.4e-18	30.8
WP_015057121.1\|247041_248001_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
WP_001067855.1\|247891_248596_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011152976.1\|248772_249432_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	4.2e-130	99.1
WP_001067855.1\|249653_250358_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|250966_251671_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002903955.1\|253304_254207_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_002210513.1\|254468_255230_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002904004.1\|255250_256111_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_001067855.1\|256247_256952_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
258966:260986	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP038656

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP038656_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038656_1

5117658-5117752

Orphan

Consensus_repeat	Method
TAATGATTCATGTACAAACTTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP038656_1

>merge|NZ_CP038656|1|5117658-5117752|CRISPRCasFinder
TAATGATTCATGTACAAACTTTGTACGTAAGTTTTCAGGTTTTAAAATACTTTGTAATGATTAATACTTGGTTAATGATTCATGTACAAACTTTG

>NZ_CP038656|1|1|5117658-5117752|CRISPRCasFinder
TAATGATTCATGTACAAACTTTG	TACGTAAGTTTTCAGGTTTTAAAATACTTTGTAATGATTAATACTTGGT
TAATGATTCATGTACAAACTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038656.1\|WP_008321043.1\|5111989_5114149_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
NZ_CP038656.1\|WP_003029582.1\|5126108_5126417_-\|maltose-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP038656.1\|WP_003029584.1\|5127325_5128249_+\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|236514
NZ_CP038656.1\|WP_008321066.1\|5123521_5124286_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_003029581.1\|5125423_5126080_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225420
NZ_CP038656.1\|WP_008321044.1\|5114197_5114593_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_077258089.1\|5126926_5127097_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378971
NZ_CP038656.1\|WP_008321037.1\|5109687_5109897_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_008321033.1\|5107934_5109137_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271184
NZ_CP038656.1\|WP_008321040.1\|5110029_5111064_-\|phage-capsid-protein	unknown	unknown	gnl\|CDD\|377147
NZ_CP038656.1\|WP_008321072.1\|5124747_5125368_+\|inovirus-Gp2-family-protein	unknown	unknown	gnl\|CDD\|371695
NZ_CP038656.1\|WP_008321041.1\|5111079_5111421_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_008321061.1\|5121321_5122641_+\|integrase-family-protein	unknown	unknown	gnl\|CDD\|271182
NZ_CP038656.1\|WP_008321052.1\|5116440_5116884_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_008321035.1\|5109257_5109458_-\|glycogen-synthase	unknown	unknown	gnl\|CDD\|179501
NZ_CP038656.1\|WP_008321059.1\|5120164_5120557_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_008321048.1\|5115248_5116166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_003029587.1\|5128414_5129932_+\|carbohydrate-porin	unknown	unknown	gnl\|CDD\|367007
NZ_CP038656.1\|WP_008321046.1\|5114749_5115235_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038656.1\|WP_008321055.1\|5118923_5119484_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271192

Protein	Function_ID	Function_description	E-value
NZ_CP038656.1\|WP_008321043.1\|5111989_5114149_-\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	8.10942e-06
NZ_CP038656.1\|WP_003029582.1\|5126108_5126417_-\|maltose-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	1.95088e-15
NZ_CP038656.1\|WP_008321033.1\|5107934_5109137_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	6.34111e-47
NZ_CP038656.1\|WP_008321040.1\|5110029_5111064_-\|phage-capsid-protein	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	1.30488e-10
NZ_CP038656.1\|WP_008321072.1\|5124747_5125368_+\|inovirus-Gp2-family-protein	gnl\|CDD\|371695	pfam11726, Inovirus_Gp2, Inovirus Gp2. Isoform G2P plays an essential role in viral DNA replication; it binds to the origin of replication and cleaves the dsDNA replicative form I (RFI) and becomes covalently bound to it via phosphotyrosine bond, generating the dsDNA replicative form II (RFII).	1.73395e-69
NZ_CP038656.1\|WP_008321035.1\|5109257_5109458_-\|glycogen-synthase	gnl\|CDD\|179501	PRK02922, PRK02922, cell surface composition regulator GlgS.	4.55039e-27
NZ_CP038656.1\|WP_008321061.1\|5121321_5122641_+\|integrase-family-protein	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	7.42895e-20
NZ_CP038656.1\|WP_077258089.1\|5126926_5127097_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378971	pfam12844, HTH_19, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains.	4.68645e-05
NZ_CP038656.1\|WP_003029581.1\|5125423_5126080_-\|hypothetical-protein	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	3.44559e-23
NZ_CP038656.1\|WP_008321055.1\|5118923_5119484_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	2.24593e-33
NZ_CP038656.1\|WP_003029587.1\|5128414_5129932_+\|carbohydrate-porin	gnl\|CDD\|367007	pfam02264, LamB, LamB porin. Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.	3.08072e-130
NZ_CP038656.1\|WP_003029584.1\|5127325_5128249_+\|aminoimidazole-riboside-kinase	gnl\|CDD\|236514	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional.	0

>NZ_CP038656.1|WP_008321052.1|5116440_5116884_-|hypothetical-protein
MNKPKSQRLDLTSMTGEEIADLILDGKYTKSALWAFISRNGGADACHAKHPQIAVCLHILKQERKKAKHARVVKTVLKPLSNQRADGMKLTEILHPILEGHRQLYLSKLNLALTHEQIIMLLVAVNGAEELEAYGYPLAGEFPTATA
>NZ_CP038656.1|WP_008321048.1|5115248_5116166_-|hypothetical-protein
MTGTTKTEKYAFFFKRLLHSTHIVRQDTREEIAIPTETETLYGYMRDQYESYNADGKPFFESQESMGLKFKGRDRRWIATRIAVLNRLGLVKSEEQERDSYGHKRFHHTVIPLEGTEGVAANLLFYGPASISGGPLAEGMLIRTLVKKKPRGTPKTKKVTVPIIEESDDEKEQSVTDVPEIAASTARVGQPLSDLLSELHDDLSADNAAMTGENIVNMPWIETPFYNGRLMPDARRWAQSQGATTWQDEIKLVWKLTGTTNMGEPGEYMRPDDIPAPEPEKQQINGYTLCVDSLEEPDWGEDQPF
>NZ_CP038656.1|WP_008321046.1|5114749_5115235_-|hypothetical-protein
MCEQVTGDSQTDNGFQTVKSDKLKRLFKNRRRDESVVKTAKTLLVHGYAPGRVALILRLDPEFVGELAKTWNPRFRRVKYTSQHATGVTVRQYFESSSMLENICADLQLPLFTVVRYLSNEGIPLAEIMARFPEETDPLVIEYRKTLSRHAHRKQKAPRLH
>NZ_CP038656.1|WP_008321044.1|5114197_5114593_-|hypothetical-protein
MTLDSIKNALFAAMHGMTPEEYTLQKARENLASVTSGFLRKHPEYLRGRFAEGKPANGLECLKAPTDSSVNKTTDKKSNKTKIIKMLGADAGVFKPHDIDPDALERAKVACRRLVADDPERYGHIIKPQGV
>NZ_CP038656.1|WP_008321043.1|5111989_5114149_-|hypothetical-protein
MANIIVTKTINMVEWSVDKTSYGKALKAIKSLKAAQEKPAKALEAAKKRTAQSEGKAALAAAKAHTTRIKQQQRLVAEQQKQAQVQAKIVNQELAHNKKMAALSAKNAAQALTQDEARARQDLRLSRISERIRAAAASRAVMYNPNIGGAAPEPGLATAQTAAMNRGHKRISEDIVAAKRLIAVEEKREAALKREVVYYNALRKSALTLANVNGADIATRYKAISAAKEALKAQKEERYTVEETRFEMARITSELRKQARLQQRITKEQKAAGIRAGRVRTEGLTGRGIGGGIVAGGAIGGATLIGSMGVARVGQTLQGSLERSRDIKKLEQYGLGQLEFAAIQDLAMSRAGYSLSADKLADLNKDTTEKAGELLNTGSFKRNKKTGEVTFSGGGEFADIINNVLKSTNGNQKVAQKVIGEIQTMNFPEFILYLKQLQKTFKWTDNAVRHLSEAVNDGSVFLEVFNDEGHGVIDRMRQLASEGWTLSDAQQSNLDKLAELGAEYNRVQTSLADHFSASFVEGLGQYATNTDTLRQSMTGLIPIADNLGQSLGELTTNILAWASSIGEELRKGSTLPDAVYNTTVDEGGNAAAEWVKDNLGFDPRTIGQTLKQIYPWLDSSSPNNIGTGTAWDGLALNVPGLNYQGQQPQPLLKPTFSIPTIADTATRGPIPVSVTGTADLSLHQDVDININDGAVKGLIDAKIRENEVYNTNLILGVPQ
>NZ_CP038656.1|WP_008321041.1|5111079_5111421_-|hypothetical-protein
MKMGTTERSYNSVIAYAVDPNFDRKTITVDLAVEVQPGSCITSAGAAYVSGDDCLLVLIHHRAADDAHVIVADRGVYIKQDTIIAVMGATAGANAVAALTKTGAIRTSAPDAE
>NZ_CP038656.1|WP_008321040.1|5110029_5111064_-|phage-capsid-protein
MGLSTNFSFADYTNTFVNVEAKNTLLSTLNVFSDRQTSMSPKVSLDIIDEVAQKVASSVNRYGSEWSAIPKRSASNHLIEAPLYAYQDRITAADVQPYRKPGSNLQMSVMDAVTASALAMHDKYMRTKEKIFADALFRNTVEATYTQQPIISWEDEFGYQQATGTIKTNVSSGDPLRSLDDAVTAAKVRMGGLAGQLDGFILFAGSNVFRGIKYHPDIRQNVQFGVLDRDVLFNKEVLPAFSTFIIENVRVVEVTDQALYGIGPDESFLVPRFSKPLSSEIALPFGYVATATSRNLDLAFADPVDFRIWSVQDKFKNVELFAESSILPVVYRPDFVTKLTNDAV
>NZ_CP038656.1|WP_008321037.1|5109687_5109897_-|hypothetical-protein
MKLALIGAGNLPLMQWILDGTNDDAIINMSALARRLGCSRSSLLDRIANYGFDSATRYYLNEKQKKMIN
>NZ_CP038656.1|WP_008321035.1|5109257_5109458_-|glycogen-synthase
MNEPNLNALSNFDFLARSFARMYSEGFPIDIKAITGNMSGEQKAWFCLQYERYCKQAVAARKKERH
>NZ_CP038656.1|WP_008321033.1|5107934_5109137_+|tyrosine-type-recombinase/integrase
MKYKPNAYLVKENSSVYSVKVTIPPYMRFLFGNRTAFMRTTGTADIREARIIRDKVMHEFFAIRDMLKPKPQRNSVDRVLVELRSINQHVSQNDGIDFATARMCPSLVQLRDEFIVQHSDRRKLSTLSKYIKAVEVFTAHFRRKDFQLQEINRTMVTDWLDSAKQEKASQTLANYLGCLSQLVAQAQNRYHDAPKANVFTGHKLDVRHDRESYEPFTGDELAKVLALLDDEMKAVATVAMFTGLRLNEICSLRISNIKTVEGVWCFEITEGKTRNAARLVPIHSKLVALVKQLIQHNHNGFLFYHASITERADGKRSTWHTQRFTRAKRKALGEKGTERKVFHSLRGMFISQLDREGVPEDRIALIVGHERGKTESFRTYSKSAGMKELSEYVELVSYVM
>NZ_CP038656.1|WP_008321055.1|5118923_5119484_+|tyrosine-type-recombinase/integrase
MKRVEPVRDKEKIAEVESLLRKHNTSPIYGDLWVFLNQTAARVGDALRLRYADFNHIEGNVLNLKEQKTGKIRSIMLTAKALELVAQRRADNPGHEYLFEVDSNRAKGKPISRVTVSAKFKEAGDMLNLHIAAHSPRKNLGYHALKRGVSLPTLTKLYGHSSQAVTLAYCGIMEKDVEDVFQTIDY
>NZ_CP038656.1|WP_008321059.1|5120164_5120557_-|hypothetical-protein
MAINRLVCQCLALSILGAAVFEVQAETQSLKCVYPKYSDHEGLHEAKNPMVFSFIIDTKTNKVYMTGNVSSVEVTPVPNGVSGNSFIETTPVGNVTVTTVMANGESVHSRSMVYPDGILASQYYGTCEAN
>NZ_CP038656.1|WP_008321061.1|5121321_5122641_+|integrase-family-protein
MALSRQKLTFERIRRFTLPEGKNQVFLWDTDVTSLACRATRGAKAFVFQSLYAGKTLRMTIGNINDWRIDDARAEARRLQTLIDTGIDPRIAKAEKIAEAESQQAESRKTKATFSSAWEDYLDELRTGISAKTKRPYSARYIADHVNLSSRGGESKKRGRGPTSPGPLASLLDRPLSELTPENIAEWLSTERQNRPTVTAHAYRLLRAFIKWANYQKKYQGIIDGDLAQDHNVRKMVPISASKAGDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEISSLRWSDIDFKWSSMRIKDKIEGERIIPLTPYVSDLLRSLMEIPNRGTNEENWVFRSNSKSGKIIEPRSAHNRALTRAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKVELWILEEAKIKNNVDKR
>NZ_CP038656.1|WP_008321066.1|5123521_5124286_+|hypothetical-protein
MKKRITFSVNNSSTIDAIDDYSNAKGYSRSEVISFLLNATVPALNKITSQYHIAQTLESTLGCIFEEKVPSIARGEPKLTYEEFFHSVWNTHIRHRNEVVDQDFYAHKIPHDKMGKSEKKLIHEKLSYIIKSFNVKKAIFIYTDRRVNHKHLIAGGLSNIILIKETVYDGCFFDLSSIVIMPIFELITFGVEAVLKRNKTPPKQSCYCWIPIYYTNDLAVMVPVIAEGDTPQKAMKGGDAIIINPFNGEVSHTF
>NZ_CP038656.1|WP_008321072.1|5124747_5125368_+|inovirus-Gp2-family-protein
MELYHGSHGEHVLAYKKHIERVVNDAISEFPRTMALRVDVHYPPILDRGDTVCCFPNLEPGAISRFRNALNAMLEANERTRAANGKRIYPNRVRHVWAREFSEEGKCHFHLGLFFNKDAYYHLGDYEAERNLRMMIVRAWYSALGLELDDYPGLVHYPENCRYILDVNDFNFEGEYNKLLNRLDYLAKLDTKAYGDGDRSFGCSRG
>NZ_CP038656.1|WP_003029581.1|5125423_5126080_-|hypothetical-protein
MKSLTTVRKKSPNYPVEFKIKMVELSHRPDIRVFAFASEDKEYQPLLDDILDGPMVGRFDTEEAGKALIDGGLIERLMSTIMPFITSEAPLPDTHLRRETTWYYPLEAIRETVVNALAHRDWTRFVEIEIGLYSNRFEVISPGALNNSMSIEKMVTGQRSPRNTIIMEVLRDYGYVDFRGMGVRTKIIPLTQAMSGQLPEFTATDDYLKTILYRSPSS
>NZ_CP038656.1|WP_003029582.1|5126108_5126417_-|maltose-O-acetyltransferase
MNDKLPPCADTRVERVRLKDGDYFFPAEPAIKADSLRTKSLLHRFNHTDPAHIDSRLLLMKELLPECGEGVSVTTSFHCSRGYNIRKRRLSTVWQILKFLRG
>NZ_CP038656.1|WP_077258089.1|5126926_5127097_+|helix-turn-helix-transcriptional-regulator
MKLRSFAGLMRQQLASRMGISYKYLRSIEANPSRASITTLNHYAKKCGVKSPLIYL
>NZ_CP038656.1|WP_003029584.1|5127325_5128249_+|aminoimidazole-riboside-kinase
MKAKVWVLGDAVVDLLPESEGRLLQCPGGAPANVAVGVARLGGNSGFIGRVGGDPFGRYMRHTLQQEQVDVSHMYLDDHHRTSTVVVDLDDQGERTFTFMVRPSADLFLAEEDLPQFAAGQWLHICSIALSAEPSRSATFAAMENIKRAGGRVSFDPNIRLDLWQDQNLLHACLDRALRLANVVKLSEEELILISGSNDIAQGIASITERYQPELLLVTQGKAGVIAAFQQQFIHFSAKPVVSVDTTGAGDAFVAGLLASLAANGMPADINALEPTLALAQTCGALATLAKGAMTALPYQRDLHRQI
>NZ_CP038656.1|WP_003029587.1|5128414_5129932_+|carbohydrate-porin
MFRKSTLAVLIALLTGAASAHAQTDLSSIEARLIALEKRLQDAENRAQTAETRAESAEKKVQQLTTQQQKTQDSTQEVAQRTAKLEKKADEKSGFEFHGYARSGVIMNDSGASTKSGAYMTPAGETGGAIGRLGNQADTYVEMNLEHKQTLDNGATTRFKVMVADGQTTYNDWTASTSDLNVRQAFVELGNLPTFDGPFKGSTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVRWNDSVRSNFSLYGRNFGDIADTSNSVQNYIVSMNNFIGPVQMMVSGMRAKDNDERQDTNGNPVKGDAANTGVHALLGLHNDSFYGLREGASKTALLYGHGLGAEVKGVGSDGALRSGANTWRFASYGTTPLSKNWFIAPAILAQTSKDRYVDGDSYQWATLNMRLIQEINQNFALAYEGSYQYMDLKPEGYNDRHAVNGSFYKLTFAPTFKVGDIGDFFSRPEIRLYTSWMDWSKKLNNYASDDALGSSGFKSGGEWSFGMQMETWF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

338288 : 397364

Sodalis_phage(14.29%)

capsid,transposase,integrase

attL 342595:342611|attR 404929:404945

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003019184.1\|338288_339251_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.7e-69	55.2
WP_003019187.1\|339481_340297_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003019190.1\|340345_340996_+	LysE family translocator	NA	NA	NA	NA
WP_003019192.1\|341321_342563_+	multidrug efflux MFS transporter MdtM	NA	NA	NA	NA
342595:342611	attL	NA	NA	NA	NA
WP_003019195.1\|342643_343834_-	cystathionine beta-lyase	NA	NA	NA	NA
WP_003019196.1\|343864_345097_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_003019198.1\|345316_346243_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003019200.1\|346318_347599_+	DUF445 domain-containing protein	NA	NA	NA	NA
WP_003019202.1\|347612_348077_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003019203.1\|348174_349362_+	MFS transporter	NA	NA	NA	NA
WP_003019205.1\|349552_349954_+	hypothetical protein	NA	NA	NA	NA
WP_008322158.1\|350017_351025_-	hypothetical protein	Q1MVN1	Enterobacteria_phage	8.2e-85	49.7
WP_008322159.1\|351216_351420_-	hypothetical protein	NA	NA	NA	NA
WP_003033268.1\|352068_352842_-	Uxu operon transcriptional regulator	NA	NA	NA	NA
WP_003033266.1\|352974_354450_-	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	5.8e-47	31.6
WP_003033263.1\|354528_355713_-	mannonate dehydratase	NA	NA	NA	NA
WP_003033260.1\|355972_357316_+	gluconate permease GntP	NA	NA	NA	NA
WP_003033257.1\|357365_358061_-	lactate utilization protein C	NA	NA	NA	NA
WP_003033254.1\|358053_359481_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_003033252.1\|359491_360211_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_003029921.1\|360792_362346_+	L-lactate permease	NA	NA	NA	NA
WP_003031569.1\|362827_363685_-	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_003031571.1\|363696_364962_-	tyrosine permease	NA	NA	NA	NA
WP_003031573.1\|365151_366522_-	tyrosine phenol-lyase	NA	NA	NA	NA
WP_003031575.1\|367300_367663_+	endoribonuclease SymE	NA	NA	NA	NA
WP_003031576.1\|367906_368581_+	hypothetical protein	NA	NA	NA	NA
WP_003031578.1\|368582_368930_+	hypothetical protein	NA	NA	NA	NA
WP_000019450.1\|369308_370289_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
WP_153983877.1\|370333_370612_+	cytoplasmic protein USSDB7A	NA	NA	NA	NA
WP_100216202.1\|370974_372142_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.4e-166	89.5
WP_143993159.1\|373257_373449_-	hypothetical protein	NA	NA	NA	NA
WP_153983820.1\|373579_374611_-\|capsid	phage capsid protein	NA	NA	NA	NA
WP_153983821.1\|374627_374990_-	hypothetical protein	NA	NA	NA	NA
WP_143993162.1\|374986_375211_-	hypothetical protein	NA	NA	NA	NA
WP_057056066.1\|375935_376274_-	hypothetical protein	NA	NA	NA	NA
WP_153983878.1\|376266_376530_-	hypothetical protein	NA	NA	NA	NA
WP_153983822.1\|376660_377122_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_153983823.1\|377115_377841_-	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_153983824.1\|378049_378205_-	hypothetical protein	NA	NA	NA	NA
WP_157809232.1\|379935_380496_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153983825.1\|380492_380714_+	hypothetical protein	NA	NA	NA	NA
WP_142673817.1\|381109_381661_-	hypothetical protein	NA	NA	NA	NA
WP_008322865.1\|381839_382280_+	hypothetical protein	NA	NA	NA	NA
WP_008322868.1\|382515_382737_+	hypothetical protein	NA	NA	NA	NA
WP_008322871.1\|383365_384079_+	hypothetical protein	NA	NA	NA	NA
WP_153983826.1\|384163_385258_-	hypothetical protein	NA	NA	NA	NA
WP_008322874.1\|385496_386519_+	DNA methyltransferase	Q96718	Paramecium_bursaria_Chlorella_virus	8.8e-26	27.9
WP_008322875.1\|386572_388825_+	N-6 DNA methylase	A0A1B1IUC6	uncultured_Mediterranean_phage	5.1e-10	22.2
WP_008322876.1\|388817_389411_+	hypothetical protein	NA	NA	NA	NA
WP_008322877.1\|389476_389929_+	hypothetical protein	NA	NA	NA	NA
WP_008322880.1\|390374_390812_+	hypothetical protein	NA	NA	NA	NA
WP_153983827.1\|390780_391962_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_008322888.1\|392492_392879_+	hypothetical protein	NA	NA	NA	NA
WP_008322889.1\|392897_393212_+	hypothetical protein	NA	NA	NA	NA
WP_008322891.1\|393265_393691_-	hypothetical protein	NA	NA	NA	NA
WP_001062150.1\|393787_394174_-	hypothetical protein	NA	NA	NA	NA
WP_016155585.1\|394188_396063_-	hypothetical protein	NA	NA	NA	NA
WP_008322896.1\|396059_397364_-\|integrase	site-specific integrase	NA	NA	NA	NA
404929:404945	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1469559 : 1546780

uncultured_Caudovirales_phage(71.43%)

protease,integrase,capsid,head,tail,tRNA,portal,terminase

attL 1493356:1493374|attR 1509598:1509616

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003031157.1\|1469559_1470507_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.0e-08	39.8
WP_003031159.1\|1470521_1471031_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
WP_003031161.1\|1471160_1472285_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003031162.1\|1472256_1472730_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_008324985.1\|1472756_1473299_+	hypothetical protein	NA	NA	NA	NA
WP_003031166.1\|1473303_1473876_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_003031168.1\|1473877_1474699_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_003031169.1\|1474695_1474953_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_003031171.1\|1474928_1475483_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_003025300.1\|1481476_1482235_-	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.1e-20	31.7
WP_003025299.1\|1482242_1483346_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003025297.1\|1483355_1484537_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003025295.1\|1484606_1485632_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	9.0e-71	39.5
WP_003025292.1\|1486091_1486313_-	membrane protein	NA	NA	NA	NA
WP_003025288.1\|1486583_1489697_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_003025285.1\|1489708_1490869_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003025283.1\|1491288_1491945_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
WP_003025279.1\|1491990_1492155_-	DUF2556 family protein	NA	NA	NA	NA
WP_008320694.1\|1492237_1493122_-	adenine-specific DNA-methyltransferase	M4QNN5	Ostreococcus_lucimarinus_virus	3.6e-28	32.8
1493356:1493374	attL	NA	NA	NA	NA
WP_153983641.1\|1493411_1494635_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JB45	uncultured_Caudovirales_phage	2.7e-231	93.4
WP_153983642.1\|1494631_1495432_+	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	8.1e-35	38.3
WP_153983643.1\|1495532_1495739_+	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	1.5e-25	82.4
WP_162009219.1\|1496520_1496733_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	1.2e-09	50.9
WP_078309651.1\|1496725_1496911_+	hypothetical protein	A0A2H4JFH8	uncultured_Caudovirales_phage	8.3e-20	85.2
WP_001547834.1\|1496903_1497131_+	hypothetical protein	A0A2H4JBA1	uncultured_Caudovirales_phage	1.6e-33	100.0
WP_153983645.1\|1497127_1497496_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	6.1e-62	99.2
WP_153983646.1\|1497492_1498857_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	3.4e-259	97.1
WP_045329600.1\|1499079_1499334_+	hypothetical protein	A0A2H4JEE4	uncultured_Caudovirales_phage	3.2e-38	98.8
WP_023332888.1\|1499346_1499646_+	hypothetical protein	A0A2H4JB54	uncultured_Caudovirales_phage	1.1e-48	100.0
WP_153983647.1\|1499877_1501044_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	4.6e-204	94.1
WP_153983648.1\|1501095_1501656_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.3e-100	98.4
WP_153983649.1\|1501657_1502893_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	3.5e-239	98.8
WP_112018966.1\|1502889_1503228_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	5.0e-55	95.5
WP_112018967.1\|1503224_1503518_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.6e-49	97.9
WP_112018968.1\|1503517_1503961_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.9e-82	95.9
WP_162009211.1\|1503953_1504106_+	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	5.2e-20	98.0
WP_000113647.1\|1504236_1504593_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_153983650.1\|1504576_1506238_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.7
WP_153983651.1\|1506251_1509557_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	1.8e-285	58.7
WP_153983652.1\|1509709_1510084_-	hypothetical protein	NA	NA	NA	NA
1509598:1509616	attR	NA	NA	NA	NA
WP_000462905.1\|1510593_1510890_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_003025224.1\|1510915_1511881_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_003025221.1\|1512241_1513123_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_003025218.1\|1513134_1514586_-	sodium/pantothenate symporter	NA	NA	NA	NA
WP_003025216.1\|1514575_1514818_-	YhdT family protein	NA	NA	NA	NA
WP_003025213.1\|1514925_1516275_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_003025210.1\|1516285_1516756_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_003025208.1\|1517148_1517748_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_003025204.1\|1518872_1519847_-	oxidoreductase	NA	NA	NA	NA
WP_003025202.1\|1520072_1522013_+	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_153752135.1\|1522021_1522342_-	hypothetical protein	NA	NA	NA	NA
WP_000913396.1\|1522319_1523363_+	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_003025198.1\|1523429_1524452_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003025196.1\|1524452_1524941_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003025192.1\|1524948_1525542_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_003025190.1\|1525531_1527001_+	ribonuclease G	NA	NA	NA	NA
WP_003025186.1\|1527112_1530928_+	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_003025183.1\|1531089_1532535_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_003839896.1\|1532621_1533551_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_003025177.1\|1533735_1533939_+	AaeX family protein	NA	NA	NA	NA
WP_003025174.1\|1533946_1534879_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_003025171.1\|1534884_1536852_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_003025168.1\|1536971_1537250_+	hypothetical protein	NA	NA	NA	NA
WP_003025165.1\|1537307_1537574_-	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_003025162.1\|1537950_1538421_-	transcriptional regulator ArgR	NA	NA	NA	NA
WP_003025158.1\|1538857_1539793_+	malate dehydrogenase	NA	NA	NA	NA
WP_003025154.1\|1539849_1540917_-	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_003025151.1\|1541006_1542374_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	2.5e-20	25.3
WP_003025147.1\|1542542_1542941_-	DUF1043 family protein	NA	NA	NA	NA
WP_003025144.1\|1543133_1544261_+	cell division protein ZapE	NA	NA	NA	NA
WP_003025141.1\|1544479_1544908_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_003025138.1\|1544923_1545316_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_003025132.1\|1545632_1546271_+	stringent starvation protein A	NA	NA	NA	NA
WP_003025130.1\|1546276_1546780_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	7.3e-26	54.8

DBSCAN-SWA_3

1569465 : 1577116

Thermobifida_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003025085.1\|1569465_1570320_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.4e-05	28.4
WP_003025083.1\|1570365_1570857_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_003025078.1\|1570940_1571228_-	ribosome hibernation promoting factor	A0A0M7QCF2	Escherichia_phage	4.2e-10	43.2
WP_003025074.1\|1571250_1572684_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_003025073.1\|1572730_1573456_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-22	28.4
WP_003025070.1\|1573462_1574011_-	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
WP_003025068.1\|1573979_1574555_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_003025065.1\|1574551_1575118_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	4.2e-54	76.3
WP_003025063.1\|1575138_1576125_-	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	1.9e-38	31.5
WP_003025060.1\|1576138_1577116_-	calcium/sodium antiporter	A0A2D1GNI8	Pseudoalteromonas_phage	4.8e-05	23.3

DBSCAN-SWA_4

1725447 : 1735452

Moraxella_phage(16.67%)

portal,integrase

attL 1719758:1719770|attR 1727640:1727652

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1719758:1719770	attL	NA	NA	NA	NA
WP_118929543.1\|1725447_1726848_+\|integrase	site-specific integrase	A0A0R6PGY7	Moraxella_phage	4.4e-44	31.5
WP_153983656.1\|1726844_1727627_+	hypothetical protein	NA	NA	NA	NA
WP_153983657.1\|1727773_1727965_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
1727640:1727652	attR	NA	NA	NA	NA
WP_001118612.1\|1728347_1728524_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.2e-05	55.6
WP_118929373.1\|1728516_1728876_+	hypothetical protein	NA	NA	NA	NA
WP_045330990.1\|1728907_1729192_+	hypothetical protein	NA	NA	NA	NA
WP_045330937.1\|1729188_1729572_+	DUF5375 family protein	NA	NA	NA	NA
WP_153983658.1\|1729568_1732241_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.6e-58	34.4
WP_118929541.1\|1732642_1733404_+	septation initiation protein	NA	NA	NA	NA
WP_061357369.1\|1733403_1733676_+	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	1.4e-07	44.9
WP_058712693.1\|1734030_1734393_-	hypothetical protein	B2ZY70	Ralstonia_phage	3.0e-13	42.2
WP_153983659.1\|1734396_1735452_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.1e-169	88.1

DBSCAN-SWA_5

1847212 : 1863799

Escherichia_phage(50.0%)

transposase,integrase

attL 1841649:1841708|attR 1868365:1869134

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1841649:1841708	attL	NA	NA	NA	NA
WP_000935452.1\|1847212_1848517_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001067855.1\|1848563_1849268_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|1849457_1850273_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|1850423_1851128_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000480968.1\|1851188_1852025_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|1852024_1852828_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_001043265.1\|1852888_1853704_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_000240536.1\|1854011_1854863_-	replication protein	NA	NA	NA	NA
WP_001067855.1\|1855618_1856323_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000557454.1\|1856555_1857416_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
WP_000587837.1\|1857428_1857971_+	AAA family ATPase	NA	NA	NA	NA
WP_000951934.1\|1858452_1858644_-	hypothetical protein	NA	NA	NA	NA
WP_000248278.1\|1858667_1858895_+	hypothetical protein	NA	NA	NA	NA
WP_000080861.1\|1858945_1860082_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_014342212.1\|1860048_1860198_-	hypothetical protein	NA	NA	NA	NA
WP_000971921.1\|1860196_1861567_+\|transposase	IS1182-like element ISCfr1 family transposase	NA	NA	NA	NA
WP_014342213.1\|1861708_1861834_-	hypothetical protein	NA	NA	NA	NA
WP_000027057.1\|1862387_1863248_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001387387.1\|1863397_1863799_+\|transposase	IS91 family transposase	NA	NA	NA	NA
1868365:1869134	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2444667 : 2491223

Salmonella_phage(59.18%)

integrase,terminase,holin,tail,transposase

attL 2429000:2429015|attR 2459572:2459587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2429000:2429015	attL	NA	NA	NA	NA
WP_153983680.1\|2444667_2446134_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.4e-87	38.5
WP_003037760.1\|2446197_2447775_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_108961756.1\|2447967_2449221_+\|integrase	tyrosine-type recombinase/integrase	T1S9J3	Salmonella_phage	6.8e-214	88.7
WP_045717171.1\|2449217_2449397_-	hypothetical protein	T1SA82	Salmonella_phage	3.5e-23	96.6
WP_108961755.1\|2449393_2449987_-	adenine methylase	T1SA14	Salmonella_phage	3.0e-111	94.9
WP_153983681.1\|2449983_2451051_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	2.8e-200	98.6
WP_153983682.1\|2451047_2451206_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.4e-15	76.9
WP_016046630.1\|2451198_2451498_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	1.1e-48	100.0
WP_000816432.1\|2451607_2451856_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.5e-32	81.7
WP_003037791.1\|2451902_2452844_-	recombinase RecT	A0A193GYL3	Enterobacter_phage	4.5e-162	90.4
WP_003037794.1\|2452840_2453662_-	exonuclease VIII/RecE-like protein	A0A193GYK2	Enterobacter_phage	9.8e-161	98.5
WP_003037797.1\|2453658_2453961_-	hypothetical protein	T1SA88	Salmonella_phage	5.5e-45	96.0
WP_153983683.1\|2453968_2454928_-	hypothetical protein	M9P0E1	Enterobacteria_phage	2.7e-45	64.3
WP_153983684.1\|2455298_2455895_-	helix-turn-helix domain-containing protein	Q858D7	Salmonella_phage	2.2e-106	98.5
WP_001278768.1\|2456050_2456284_+	hypothetical protein	T1SAR5	Salmonella_phage	1.2e-39	100.0
WP_052930708.1\|2456431_2456632_+	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	4.3e-22	74.2
WP_153983685.1\|2456647_2457442_+	primosomal protein	Q286X4	Escherichia_phage	3.0e-90	73.8
WP_153983686.1\|2457438_2458224_+	replication protein	A0A193GYX1	Enterobacter_phage	5.5e-137	88.9
WP_080313187.1\|2458341_2458686_+	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	6.3e-61	97.4
WP_153983687.1\|2459106_2459364_+	DUF4752 family protein	T1S9K2	Salmonella_phage	1.0e-36	90.6
WP_153983688.1\|2459360_2459876_+	hypothetical protein	A0A220NQV2	Salmonella_phage	4.9e-09	33.5
2459572:2459587	attR	NA	NA	NA	NA
WP_127516700.1\|2459877_2460246_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	4.1e-66	96.7
WP_153983689.1\|2460242_2460674_+	hypothetical protein	A0A192Y6F5	Salmonella_phage	2.0e-27	68.3
WP_153983690.1\|2460788_2461127_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.3e-50	89.3
WP_153983867.1\|2461230_2461827_+\|terminase	terminase small subunit	Q858H4	Salmonella_phage	6.7e-103	99.0
WP_153983691.1\|2461823_2463305_+\|terminase	terminase	M1F3C4	Salmonella_phage	4.3e-292	97.6
WP_086550318.1\|2463348_2463768_-	hypothetical protein	A0A2H4ZJ80	Enterobacter_phage	8.8e-17	87.8
WP_000334867.1\|2464603_2464810_+	hypothetical protein	T1SA67	Salmonella_phage	5.7e-09	100.0
WP_153983692.1\|2464824_2466495_+\|tail	phage tail protein	T1S9Z7	Salmonella_phage	3.1e-307	96.9
WP_053388643.1\|2466491_2466788_+	hypothetical protein	T1SBI9	Salmonella_phage	7.6e-39	81.6
WP_153983693.1\|2466790_2467486_+	peptidase	Q858G9	Salmonella_phage	1.7e-65	77.4
WP_049014925.1\|2467500_2468487_+	phage protein	A0A193GZ49	Enterobacter_phage	3.9e-164	86.3
WP_153983694.1\|2468538_2468979_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.1e-65	90.4
WP_049014922.1\|2468989_2469370_+	hypothetical protein	G9L6C7	Escherichia_phage	5.2e-24	51.2
WP_153983695.1\|2469421_2469745_+	hypothetical protein	A0A193GYH8	Enterobacter_phage	1.7e-36	72.8
WP_108961738.1\|2469744_2470350_+	hypothetical protein	T1SAQ2	Salmonella_phage	2.6e-110	98.5
WP_153983696.1\|2470349_2472827_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	97.6
WP_153983697.1\|2472826_2473291_+	hypothetical protein	T1SA73	Salmonella_phage	3.2e-84	94.8
WP_153983698.1\|2473290_2473833_+	hypothetical protein	T1SA02	Salmonella_phage	5.4e-67	93.3
WP_153983699.1\|2473845_2476374_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	97.7
WP_153983700.1\|2476373_2477939_+	hypothetical protein	Q858F9	Salmonella_phage	3.0e-243	73.8
WP_153983701.1\|2477938_2480695_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	94.7
WP_003838319.1\|2481722_2481875_-	hypothetical protein	G9L6D9	Escherichia_phage	1.5e-14	85.7
WP_153983703.1\|2481943_2482630_-	BRO-like protein	G9L6E2	Escherichia_phage	9.8e-82	65.5
WP_001187608.1\|2482943_2483204_-	hypothetical protein	G9L6E3	Escherichia_phage	1.2e-35	83.3
WP_032933742.1\|2484764_2485691_+	hypothetical protein	NA	NA	NA	NA
WP_001275998.1\|2485858_2486263_+	membrane protein	T1SA79	Salmonella_phage	9.9e-66	100.0
WP_016046623.1\|2486249_2486558_+\|holin	phage holin family protein	T1SA10	Salmonella_phage	2.6e-50	100.0
WP_153983704.1\|2486547_2487174_+	glycoside hydrolase family 19 protein	T1SBJ3	Salmonella_phage	4.7e-107	89.4
WP_108961729.1\|2487170_2487659_+	DUF2514 family protein	A0A193GYU6	Enterobacter_phage	1.4e-50	66.7
WP_003037905.1\|2487858_2488737_-	small-conductance mechanosensitive channel MscS	NA	NA	NA	NA
WP_071524479.1\|2489101_2489305_-	DUF2633 family protein	G9L6F2	Escherichia_phage	4.3e-17	71.4
WP_001567660.1\|2490200_2491223_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2710713 : 2787344

Pseudomonas_phage(23.91%)

protease,integrase,terminase,capsid,plate,tail,transposase

attL 2732257:2732271|attR 2788426:2788440

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003027622.1\|2710713_2711664_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.3e-67	56.0
WP_003027620.1\|2711847_2713038_-	anaerobic glycerol-3-phosphate dehydrogenase subunit C	NA	NA	NA	NA
WP_003027619.1\|2713034_2714294_-	glycerol-3-phosphate dehydrogenase subunit GlpB	NA	NA	NA	NA
WP_003027617.1\|2714283_2715912_-	anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA	NA	NA	NA
WP_003027615.1\|2716182_2717541_+	glycerol-3-phosphate transporter	NA	NA	NA	NA
WP_003027612.1\|2717544_2718612_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	3.9e-08	44.6
WP_003027609.1\|2718785_2719040_-	ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE	G9IAA2	Pseudomonas_phage	2.4e-25	76.1
WP_003027605.1\|2719039_2720170_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	1.3e-174	78.9
WP_003027604.1\|2720280_2722566_-	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	6.0e-285	63.9
WP_003027601.1\|2723054_2723783_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
WP_044701169.1\|2723941_2726578_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	2.8e-92	31.1
WP_003027595.1\|2726699_2729546_+	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	3.2e-41	26.2
WP_003027592.1\|2729658_2730309_-	transcriptional regulator RcsB	NA	NA	NA	NA
WP_003027590.1\|2730325_2732995_-	phosphotransferase RcsD	NA	NA	NA	NA
2732257:2732271	attL	NA	NA	NA	NA
WP_003027588.1\|2733733_2734849_+	porin OmpC	Q1MVN1	Enterobacteria_phage	8.4e-115	58.4
WP_003027586.1\|2734964_2736017_+	FAD:protein FMN transferase ApbE	NA	NA	NA	NA
WP_003027584.1\|2736096_2737161_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A2P1EL10	Moumouvirus	1.1e-18	52.9
WP_003027582.1\|2737160_2737811_+	DNA oxidative demethylase AlkB	A0A2K9L3R7	Tupanvirus	2.9e-06	34.3
WP_003027580.1\|2737886_2739530_+	multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-10	22.8
WP_003027576.1\|2739635_2741072_+	magnesium transporter	NA	NA	NA	NA
WP_003027573.1\|2741034_2742282_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.0e-82	49.0
WP_008323420.1\|2742560_2744222_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_003027568.1\|2744314_2744812_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_003027564.1\|2745224_2745716_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_003027560.1\|2745705_2745969_+	chaperone NapD	NA	NA	NA	NA
WP_003027558.1\|2745965_2748452_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_003027555.1\|2748458_2749154_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_003027552.1\|2749140_2750004_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_003027550.1\|2750000_2750450_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_003027548.1\|2750459_2751062_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_003027545.1\|2751082_2751703_+	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A2H4PQG7	Staphylococcus_phage	1.1e-12	26.3
WP_003027542.1\|2751699_2752359_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_003027538.1\|2752435_2753173_+	heme ABC transporter permease	NA	NA	NA	NA
WP_153983709.1\|2753169_2753325_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_153983710.1\|2753426_2753987_-	recombinase family protein	K7PJT4	Enterobacteria_phage	1.1e-73	73.5
WP_003030316.1\|2754097_2754466_-	hypothetical protein	NA	NA	NA	NA
WP_153986006.1\|2754475_2755549_-	hypothetical protein	A0A0M3ULD8	Salmonella_phage	9.2e-10	34.9
WP_096218656.1\|2755548_2756121_-	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	4.1e-33	42.2
WP_060570681.1\|2756117_2757185_-\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	9.6e-68	43.8
WP_060570682.1\|2757184_2757535_-	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	2.6e-30	60.0
WP_060570683.1\|2757624_2758230_-\|plate	phage baseplate assembly protein	F6MIL4	Haemophilus_phage	2.0e-30	56.4
WP_060570684.1\|2758213_2759431_-\|tail	phage tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	3.3e-72	37.4
WP_127785760.1\|2759414_2760746_-	multidrug DMT transporter permease	A0A2H4JGT4	uncultured_Caudovirales_phage	1.3e-32	26.0
WP_045261511.1\|2760742_2762983_-\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	1.4e-68	35.3
WP_045261512.1\|2763117_2763510_-	hypothetical protein	NA	NA	NA	NA
WP_023311695.1\|2763510_2763885_-	hypothetical protein	F6MIK8	Haemophilus_phage	9.6e-31	54.9
WP_045261513.1\|2763898_2765317_-\|tail	tail sheath protein	B7SDP8	Haemophilus_phage	2.7e-86	42.2
WP_023311742.1\|2765303_2765525_-	hypothetical protein	NA	NA	NA	NA
WP_023311741.1\|2765511_2766171_-	DUF1834 family protein	A0A0M3LQJ7	Mannheimia_phage	2.5e-21	35.4
WP_021567602.1\|2766170_2766599_-	DUF1320 family protein	A0A1B0T6F3	Thiobacimonas_phage	5.1e-12	35.1
WP_045261516.1\|2766602_2767010_-	hypothetical protein	NA	NA	NA	NA
WP_021567604.1\|2767009_2767918_-	hypothetical protein	A0A2H4J778	uncultured_Caudovirales_phage	3.8e-105	63.9
WP_045261517.1\|2767931_2768324_-	hypothetical protein	A0A2P9JZJ1	Alteromonadaceae_phage	4.1e-24	48.0
WP_096218649.1\|2768335_2769451_-	hypothetical protein	A0A0M5N0Q6	Ralstonia_phage	1.6e-57	41.2
WP_063161512.1\|2769506_2769716_-	hypothetical protein	NA	NA	NA	NA
WP_047063499.1\|2769832_2770375_-	phage virion morphogenesis protein	A0A2H4J9E5	uncultured_Caudovirales_phage	3.7e-23	37.1
WP_085406139.1\|2770371_2771631_-\|capsid	minor capsid protein	A0A0M4UTA3	Ralstonia_phage	1.1e-51	34.8
WP_063161511.1\|2771617_2773186_-	DUF935 domain-containing protein	A0A0U5KSI0	unidentified_phage	1.0e-126	44.6
WP_153983712.1\|2773188_2774841_-\|terminase	phage terminase large subunit	H6V8N6	Pseudomonas_phage	3.8e-212	66.1
WP_153983713.1\|2774845_2775055_-	hypothetical protein	NA	NA	NA	NA
WP_038637812.1\|2775047_2775548_-	DUF1804 family protein	L7P7L4	Pseudomonas_phage	5.2e-48	53.4
WP_021567611.1\|2775549_2775834_-	hypothetical protein	NA	NA	NA	NA
WP_000171281.1\|2775830_2776073_-	hypothetical protein	NA	NA	NA	NA
WP_032663807.1\|2776081_2776714_-	hypothetical protein	NA	NA	NA	NA
WP_023311729.1\|2776679_2776943_-	DUF2644 domain-containing protein	A0A2D1GNW8	Pseudomonas_phage	4.8e-13	57.3
WP_023311911.1\|2776939_2777584_-	glycoside hydrolase family 19 protein	A0A248XCW5	Klebsiella_phage	2.5e-63	56.8
WP_032663808.1\|2777662_2778169_-	hypothetical protein	NA	NA	NA	NA
WP_023311913.1\|2778168_2778603_-	hypothetical protein	A0A2D1GNW5	Pseudomonas_phage	5.2e-28	47.0
WP_072001475.1\|2778547_2779024_-	regulatory protein GemA	A0A2D1GNN4	Pseudomonas_phage	9.6e-44	63.0
WP_072049704.1\|2779085_2779301_-	hypothetical protein	A0A2D1GNS9	Pseudomonas_phage	2.0e-20	64.8
WP_023311916.1\|2779478_2779694_-	hypothetical protein	NA	NA	NA	NA
WP_153983714.1\|2779686_2780052_-	DUF4406 domain-containing protein	A0A1V0E824	Vibrio_phage	5.7e-20	52.2
WP_153983716.1\|2780637_2781357_-	DUF2786 domain-containing protein	A0A0S4L2R2	Pseudomonas_phage	1.5e-16	32.2
WP_153983717.1\|2781367_2781583_-	hypothetical protein	NA	NA	NA	NA
WP_032663812.1\|2781661_2781853_-	hypothetical protein	NA	NA	NA	NA
WP_038637769.1\|2781842_2782076_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_063617270.1\|2782077_2782722_-	DUF3164 family protein	A4JWM8	Burkholderia_virus	9.3e-74	64.6
WP_038637762.1\|2782711_2782918_-	hypothetical protein	NA	NA	NA	NA
WP_023311925.1\|2782930_2783221_-	hypothetical protein	NA	NA	NA	NA
WP_038637759.1\|2783231_2784125_-	AAA family ATPase	A0A2D1GNS0	Pseudomonas_phage	4.7e-100	59.8
WP_150319569.1\|2784136_2786182_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2D1GNK9	Pseudomonas_phage	7.8e-175	48.2
WP_023311692.1\|2786181_2786439_-	transcriptional regulator	M1PVU4	Vibrio_phage	2.1e-16	64.6
WP_023311691.1\|2786573_2787344_+	helix-turn-helix transcriptional regulator	A0A2I7S9A5	Vibrio_phage	6.1e-40	37.5
2788426:2788440	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2876442 : 2884861

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003027357.1\|2876442_2877390_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-21	29.2
WP_003027356.1\|2877373_2878105_+	ABC transporter permease	NA	NA	NA	NA
WP_003027354.1\|2878085_2878193_-	protein YohO	NA	NA	NA	NA
WP_003027351.1\|2878244_2878976_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.0e-105	93.5
WP_003027348.1\|2879201_2880887_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-281	91.6
WP_003027347.1\|2880883_2881603_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_003027346.1\|2881649_2882120_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	4.9e-64	76.9
WP_003027345.1\|2882162_2882621_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	5.6e-49	68.0
WP_003027344.1\|2882827_2884861_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	4.0e-54	27.6

DBSCAN-SWA_9

2939523 : 2949101

Bacillus_phage(28.57%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003036815.1\|2939523_2941470_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.6e-39	41.3
WP_003036813.1\|2941544_2941769_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
WP_003036810.1\|2942092_2942413_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
WP_003036804.1\|2942443_2944720_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.4e-164	42.1
WP_003036803.1\|2944989_2946351_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	3.4e-203	92.6
WP_003036800.1\|2946510_2946843_-	YegP family protein	NA	NA	NA	NA
WP_003036797.1\|2946978_2947701_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	9.2e-30	32.7
WP_003036792.1\|2947697_2949101_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.0e-32	29.6

DBSCAN-SWA_10

3160343 : 3289288

156

Escherichia_phage(28.83%)

protease,integrase,capsid,holin,head,tail,tRNA,portal,terminase

attL 3240401:3240431|attR 3288468:3288498

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003034673.1\|3160343_3162077_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	1.7e-85	33.6
WP_003034677.1\|3162315_3162882_+	VOC family protein	NA	NA	NA	NA
WP_003034680.1\|3162884_3163631_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003034682.1\|3163874_3164843_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_003034686.1\|3164839_3165583_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	3.2e-25	31.3
WP_003034689.1\|3165623_3166019_-	membrane protein	NA	NA	NA	NA
WP_153983725.1\|3166071_3166842_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	1.4e-55	78.7
WP_153983726.1\|3166823_3168137_-	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	7.9e-213	80.3
WP_016150522.1\|3168192_3168429_-	excisionase family protein	Q8W657	Enterobacteria_phage	4.2e-40	94.9
WP_071684370.1\|3168584_3168896_-	hypothetical protein	NA	NA	NA	NA
WP_071684371.1\|3168895_3169525_-	hypothetical protein	A0A1B5FPC7	Escherichia_phage	2.7e-94	82.8
WP_162009501.1\|3169521_3169635_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	5.6e-11	86.5
WP_142972741.1\|3169730_3169955_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	2.5e-18	64.4
WP_058660498.1\|3169951_3170518_-	hypothetical protein	A0A088C4R7	Shewanella_sp._phage	5.7e-27	37.8
WP_142972742.1\|3170514_3171264_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	5.5e-118	85.9
WP_162009500.1\|3171275_3171854_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-74	72.0
WP_071684375.1\|3171834_3172269_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	7.9e-53	73.8
WP_162009502.1\|3172265_3172388_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	5.0e-13	91.9
WP_142972744.1\|3172707_3173064_-	hypothetical protein	A0A1B5FPB3	Escherichia_phage	5.4e-23	49.6
WP_047500077.1\|3173939_3174131_-	hypothetical protein	A0A1B5FPB5	Escherichia_phage	9.5e-11	61.1
WP_047500075.1\|3174131_3174344_-	hypothetical protein	NA	NA	NA	NA
WP_047500074.1\|3174535_3175225_-	hypothetical protein	K7PK07	Enterobacteria_phage	4.2e-72	59.7
WP_047500072.1\|3175335_3175563_+	hypothetical protein	NA	NA	NA	NA
WP_142972746.1\|3175564_3175762_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000064516.1\|3175758_3176691_+	hypothetical protein	C5IHL2	Burkholderia_virus	2.9e-36	37.0
WP_142972747.1\|3176798_3178670_+	AAA family ATPase	Q5G8S8	Enterobacteria_phage	8.3e-224	59.5
WP_071684502.1\|3178672_3178996_+	hypothetical protein	NA	NA	NA	NA
WP_153983727.1\|3178992_3179796_+	antitermination protein	F1C595	Cronobacter_phage	5.7e-113	76.4
WP_153983728.1\|3180118_3180559_+	hypothetical protein	NA	NA	NA	NA
WP_153983729.1\|3180555_3181848_+	hypothetical protein	NA	NA	NA	NA
WP_008784467.1\|3182299_3182686_+	membrane protein	A0A192Y8P2	Salmonella_phage	1.0e-56	92.2
WP_008784468.1\|3182672_3182954_+\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	7.0e-18	48.9
WP_153983730.1\|3182953_3183568_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.1e-92	81.9
WP_104651375.1\|3183575_3183845_+	hypothetical protein	G8C7W1	Escherichia_phage	6.5e-21	69.0
WP_104651374.1\|3183801_3184008_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.3e-18	82.1
WP_104651373.1\|3183985_3184216_+	hypothetical protein	NA	NA	NA	NA
WP_104651372.1\|3184235_3184469_+	hypothetical protein	NA	NA	NA	NA
WP_048217952.1\|3184456_3184807_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	2.7e-51	80.2
WP_003841734.1\|3184963_3185461_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	9.7e-63	73.9
WP_016150488.1\|3185460_3187218_+\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	89.2
WP_008323320.1\|3187228_3187414_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	2.9e-12	57.6
WP_016150487.1\|3187413_3188643_+\|portal	phage portal protein	U5P411	Shigella_phage	1.5e-205	83.2
WP_016150486.1\|3188629_3189283_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.3e-104	85.5
WP_016150485.1\|3189296_3190505_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	6.2e-188	82.9
WP_153986030.1\|3190543_3190840_+	hypothetical protein	NA	NA	NA	NA
WP_048221283.1\|3190836_3191160_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	8.6e-20	49.0
WP_153983731.1\|3191169_3191508_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	70.5
WP_038642098.1\|3191504_3191954_+	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	6.5e-66	85.9
WP_065944737.1\|3191950_3192298_+	DUF3168 domain-containing protein	A0A220NRP0	Escherichia_phage	1.7e-45	76.5
WP_153983732.1\|3192355_3192799_+	hypothetical protein	S4TNM8	Salmonella_phage	3.7e-66	85.0
WP_001549114.1\|3192807_3193191_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	4.4e-63	93.7
WP_023305929.1\|3193199_3193478_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	8.1e-43	96.7
WP_032648715.1\|3193524_3193890_+	hypothetical protein	NA	NA	NA	NA
WP_153983733.1\|3193951_3197443_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	0.0e+00	87.8
WP_153983734.1\|3197445_3197784_+\|tail	phage tail protein	K7PKL8	Enterobacterial_phage	2.1e-37	58.9
WP_153983735.1\|3197780_3198539_+\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	8.6e-95	63.2
WP_153983736.1\|3198541_3199252_+	peptidase P60	F1C573	Cronobacter_phage	1.7e-97	70.2
WP_153983737.1\|3199251_3199839_+\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	1.4e-47	47.4
WP_153983738.1\|3199892_3203084_+	DUF1983 domain-containing protein	O64335	Escherichia_phage	0.0e+00	67.2
WP_048231682.1\|3203083_3203395_+	hypothetical protein	Q5G8V9	Enterobacteria_phage	1.5e-50	93.2
WP_048231685.1\|3203394_3204048_+	hypothetical protein	Q5G8V8	Enterobacteria_phage	2.3e-112	92.6
WP_153983739.1\|3204110_3205505_+\|tail	phage tail protein	A0A1V0E5M2	Salmonella_phage	3.2e-111	52.4
WP_153983740.1\|3205638_3205881_-	DinI-like family protein	Q6UAW0	Klebsiella_phage	5.8e-29	77.9
WP_003034861.1\|3206234_3206801_-	hydrolase	NA	NA	NA	NA
WP_003034862.1\|3207089_3208862_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_003034863.1\|3208863_3209307_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_003034865.1\|3209335_3210079_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003034867.1\|3210113_3210635_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.6e-10	35.1
WP_003034869.1\|3210715_3211327_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003034872.1\|3211335_3212346_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.6e-08	25.4
WP_008323688.1\|3212424_3213210_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_003034877.1\|3213206_3213962_-	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	6.5e-18	28.3
WP_003034880.1\|3214040_3214985_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_003034883.1\|3215000_3216320_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	36.8
WP_003034887.1\|3216439_3217411_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_003034890.1\|3217455_3218898_-	pyruvate kinase	NA	NA	NA	NA
WP_003034893.1\|3219016_3219886_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003034896.1\|3220253_3221729_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	8.3e-78	37.1
WP_003034898.1\|3221962_3223774_+	phosphogluconate dehydratase	NA	NA	NA	NA
WP_003034901.1\|3223808_3224450_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003034904.1\|3224516_3225695_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_003034906.1\|3225826_3226117_+	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_008323661.1\|3226238_3226592_+	hypothetical protein	NA	NA	NA	NA
WP_003034913.1\|3226686_3227346_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_008323658.1\|3227408_3229487_+	oligopeptidase B	NA	NA	NA	NA
WP_003034918.1\|3229477_3230140_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	7.0e-08	31.1
WP_003034921.1\|3230163_3230820_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_003034925.1\|3230926_3231157_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.0e-14	60.3
WP_003844143.1\|3231305_3233057_+	recombinase family protein	Q3HQV4	Burkholderia_phage	7.2e-44	33.3
WP_008323654.1\|3233365_3234202_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_003844141.1\|3234508_3235087_-	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	3.2e-17	36.5
WP_003844140.1\|3235440_3236343_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.5e-16	34.0
WP_008322661.1\|3236660_3236852_-	hypothetical protein	NA	NA	NA	NA
WP_032934884.1\|3237344_3237935_-	hypothetical protein	NA	NA	NA	NA
WP_003844137.1\|3238089_3238299_+	hypothetical protein	NA	NA	NA	NA
WP_003034928.1\|3238557_3238932_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_003034931.1\|3238935_3239808_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_003034934.1\|3239828_3240167_+	YebY family protein	NA	NA	NA	NA
3240401:3240431	attL	NA	NA	NA	NA
WP_137398750.1\|3240503_3241589_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-147	68.4
WP_032170291.1\|3241557_3241830_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.9e-28	64.4
WP_153983742.1\|3241893_3242136_-	DUF4060 family protein	K7PHF4	Enterobacteria_phage	1.5e-32	88.6
WP_153983868.1\|3242175_3243288_-	enterohemolysin	K7PKR8	Enterobacteria_phage	9.1e-194	93.2
WP_153983743.1\|3243299_3246062_-	exodeoxyribonuclease VIII	K7P6V4	Enterobacteria_phage	0.0e+00	67.1
WP_153983745.1\|3246369_3246567_-	DUF1482 family protein	NA	NA	NA	NA
WP_039270078.1\|3246887_3247103_+	hypothetical protein	NA	NA	NA	NA
WP_103285403.1\|3247559_3248714_-	type I restriction endonuclease subunit R	A0A1S5SAB0	Streptococcus_phage	1.9e-32	27.8
WP_099531231.1\|3248735_3249404_-	helix-turn-helix transcriptional regulator	A0A2D1GM27	Escherichia_phage	3.0e-91	67.8
WP_099531219.1\|3249546_3249756_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	8.8e-26	81.2
WP_099531221.1\|3249795_3250335_+	regulator	K7PJT7	Enterobacteria_phage	2.7e-79	84.4
WP_153983869.1\|3250519_3251512_+	replication protein	A5VW95	Enterobacteria_phage	2.7e-48	75.0
WP_153983747.1\|3251495_3252188_+	phage replication protein	G8C7U6	Escherichia_phage	1.5e-77	60.9
WP_153983748.1\|3252199_3252952_+	hypothetical protein	NA	NA	NA	NA
WP_153983749.1\|3252954_3253266_+	hypothetical protein	NA	NA	NA	NA
WP_153983870.1\|3253625_3253850_+	hypothetical protein	B8K1D2	Salmonella_phage	9.5e-18	72.4
WP_153983750.1\|3254488_3254764_+	hypothetical protein	A0A077KAZ4	Edwardsiella_phage	5.8e-33	84.7
WP_153983751.1\|3254760_3255429_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	3.2e-53	71.1
WP_153983752.1\|3255863_3256463_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	8.0e-104	95.0
WP_153983753.1\|3256462_3256669_+	hypothetical protein	S4TNP0	Salmonella_phage	4.5e-22	69.1
WP_153983754.1\|3256671_3257280_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	3.5e-46	62.6
WP_001568781.1\|3257276_3257417_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.2e-18	95.7
WP_153983755.1\|3257413_3258196_+	antitermination protein	K7PKS8	Enterobacteria_phage	1.1e-108	74.6
WP_060683741.1\|3258353_3258764_-	hypothetical protein	K7P7K4	Enterobacteria_phage	3.3e-69	96.3
WP_071701194.1\|3259113_3259602_+	hypothetical protein	A0A2P0PA94	Pectobacterium_phage	2.4e-18	46.4
WP_016066213.1\|3259646_3259925_+\|holin	holin	K7PGZ9	Enterobacteria_phage	6.0e-46	100.0
WP_153983756.1\|3259896_3260445_+	glycoside hydrolase family protein	K7PM52	Enterobacteria_phage	2.2e-100	96.2
WP_153983757.1\|3260423_3260948_+	DUF2514 family protein	A0A291LBG9	Klebsiella_phage	5.1e-06	33.8
WP_136398002.1\|3261362_3262037_+	Fur-regulated protein	M9NZE9	Enterobacteria_phage	9.0e-88	71.1
WP_019076560.1\|3262157_3262796_+	hypothetical protein	I6S676	Salmonella_phage	1.0e-109	87.7
WP_153983758.1\|3262827_3263316_+	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	9.2e-50	77.2
WP_153983759.1\|3263312_3264884_+\|terminase	terminase	G8C7P3	Escherichia_phage	4.3e-306	92.5
WP_153983760.1\|3264888_3266292_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	1.7e-242	91.3
WP_153983761.1\|3266293_3267400_+	hypothetical protein	G8C7P5	Escherichia_phage	1.5e-188	90.5
WP_153983762.1\|3267720_3268473_+	hypothetical protein	G8C7P6	Escherichia_phage	4.3e-123	92.0
WP_016156686.1\|3268490_3269630_+	hypothetical protein	G8C7P7	Escherichia_phage	4.8e-174	84.0
WP_128317024.1\|3269965_3270448_+	hypothetical protein	G8C7P9	Escherichia_phage	3.9e-77	86.9
WP_115186742.1\|3270449_3270803_+	hypothetical protein	G8C7Q0	Escherichia_phage	1.3e-53	90.6
WP_054623473.1\|3270805_3271405_+	hypothetical protein	G8C7Q1	Escherichia_phage	2.3e-98	88.4
WP_016247123.1\|3271394_3271844_+	DUF4128 domain-containing protein	G8C7Q2	Escherichia_phage	2.3e-71	89.9
WP_115186741.1\|3271890_3272823_+\|tail	phage tail protein	G8C7Q3	Escherichia_phage	6.3e-156	91.9
WP_016247125.1\|3272888_3273227_+	hypothetical protein	G8C7Q5	Escherichia_phage	2.1e-53	92.9
WP_025759422.1\|3273244_3273532_+	hypothetical protein	I6PD79	Cronobacter_phage	9.3e-18	61.5
WP_153983764.1\|3273531_3276687_+\|tail	phage tail tape measure protein	G8C7Q6	Escherichia_phage	0.0e+00	72.7
WP_128317018.1\|3276743_3277130_+	hypothetical protein	NA	NA	NA	NA
WP_058659081.1\|3277217_3277568_+	hypothetical protein	G8C7R0	Escherichia_phage	4.0e-55	92.2
WP_153983765.1\|3277564_3278338_+\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	3.5e-136	90.2
WP_153983766.1\|3278350_3279082_+	peptidase P60	G8C7R2	Escherichia_phage	4.2e-139	89.7
WP_038641010.1\|3279069_3279669_+\|tail	tail assembly protein	G8C7R3	Escherichia_phage	2.5e-97	92.0
WP_153983767.1\|3279724_3282934_+	DUF1983 domain-containing protein	G8C7R4	Escherichia_phage	0.0e+00	69.1
WP_048231682.1\|3282933_3283245_+	hypothetical protein	Q5G8V9	Enterobacteria_phage	1.5e-50	93.2
WP_048231685.1\|3283244_3283898_+	hypothetical protein	Q5G8V8	Enterobacteria_phage	2.3e-112	92.6
WP_153983739.1\|3283960_3285355_+\|tail	phage tail protein	A0A1V0E5M2	Salmonella_phage	3.2e-111	52.4
WP_088902117.1\|3285488_3285731_-	DinI family protein	Q6UAW0	Klebsiella_phage	4.4e-29	77.9
WP_121581545.1\|3285808_3286228_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.7e-34	55.9
WP_153983768.1\|3286229_3287498_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.0e-204	81.5
WP_153983871.1\|3287490_3288162_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	2.0e-79	59.5
WP_003034937.1\|3288646_3289288_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.7e-56	50.5
3288468:3288498	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3431758 : 3500223

Enterobacteria_phage(61.54%)

protease,integrase,capsid,holin,head,tail,portal,terminase

attL 3422017:3422031|attR 3453768:3453782

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3422017:3422031	attL	NA	NA	NA	NA
WP_003020678.1\|3431758_3433768_-	acyltransferase	A0A193GZ69	Enterobacter_phage	4.2e-64	45.3
WP_008322520.1\|3434267_3435461_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	5.1e-203	84.4
WP_008322518.1\|3435453_3435654_-	hypothetical protein	K7PM28	Enterobacteria_phage	1.9e-25	82.5
WP_008322517.1\|3435699_3435942_-	DUF4060 family protein	K7PHF4	Enterobacteria_phage	2.6e-29	82.3
WP_008322509.1\|3435981_3437022_-	recombinase RecT	K7PKR8	Enterobacteria_phage	5.9e-155	75.6
WP_008322507.1\|3437036_3439592_-	exodeoxyribonuclease VIII	K7P6V4	Enterobacteria_phage	1.7e-232	47.9
WP_008322503.1\|3439904_3440111_-	phage encoded cell division inhibitor protein	K7PM31	Enterobacteria_phage	9.6e-33	98.5
WP_008322501.1\|3440429_3440654_+	hypothetical protein	K7P7I0	Enterobacteria_phage	5.2e-16	66.2
WP_008322489.1\|3440853_3441756_-	serine dehydrogenasease	NA	NA	NA	NA
WP_149335231.1\|3441949_3442048_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_008322488.1\|3442060_3442759_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-102	79.3
WP_008322487.1\|3442869_3443091_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.1e-21	67.6
WP_008322486.1\|3443116_3443656_+	hypothetical protein	K7PJT7	Enterobacteria_phage	5.0e-81	86.0
WP_008322485.1\|3443823_3444771_+	phage protein	G9L6A8	Escherichia_phage	6.4e-23	30.1
WP_008322484.1\|3444773_3445523_+	ATP-binding protein	S4TNF5	Salmonella_phage	4.8e-122	86.7
WP_008322482.1\|3445541_3445853_+	hypothetical protein	NA	NA	NA	NA
WP_008322481.1\|3445849_3446659_+	hypothetical protein	NA	NA	NA	NA
WP_008322480.1\|3446655_3447015_+	hypothetical protein	A0A193GYX5	Enterobacter_phage	1.9e-07	91.4
WP_008322479.1\|3447016_3447436_+	HNH endonuclease	E7EKU5	Edwardsiella_phage	2.5e-59	74.1
WP_008322478.1\|3447432_3448083_+	hypothetical protein	K7PGV7	Enterobacterial_phage	2.9e-06	50.0
WP_008322477.1\|3448518_3449118_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	7.7e-107	96.0
WP_008322467.1\|3449326_3449935_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	5.3e-47	63.7
WP_008322465.1\|3449931_3450066_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.4e-13	100.0
WP_008322464.1\|3450062_3450878_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.1e-140	96.7
WP_032934886.1\|3451035_3451446_-	hypothetical protein	K7P7K4	Enterobacteria_phage	2.1e-71	99.3
WP_001568784.1\|3451696_3451975_+\|holin	holin	K7PGZ9	Enterobacteria_phage	5.1e-45	97.8
WP_008322460.1\|3451946_3452495_+	lysozyme	K7PM52	Enterobacteria_phage	3.8e-100	96.2
WP_032652448.1\|3452491_3452998_+	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_008322456.1\|3453685_3454072_+	hypothetical protein	NA	NA	NA	NA
3453768:3453782	attR	NA	NA	NA	NA
WP_000453624.1\|3454542_3455088_+\|terminase	terminase small subunit	E4WL18	Enterobacteria_phage	1.2e-95	100.0
WP_008322455.1\|3455062_3456985_+\|terminase	phage terminase large subunit family protein	E4WL19	Enterobacteria_phage	0.0e+00	97.5
WP_003034782.1\|3456984_3457191_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.2e-28	95.5
WP_003826190.1\|3457187_3458780_+\|portal	phage portal protein	E4WL21	Enterobacteria_phage	9.7e-290	92.1
WP_008322451.1\|3458760_3460086_+	S49 family peptidase	O64320	Escherichia_phage	4.9e-186	78.7
WP_003826193.1\|3460095_3460428_+\|head	head decoration protein	E4WL24	Enterobacteria_phage	5.0e-47	82.7
WP_008322450.1\|3460495_3461521_+\|capsid	major capsid protein	K7PGW9	Enterobacteria_phage	4.3e-182	92.4
WP_008322448.1\|3461566_3461971_+	DNA-packaging protein FI	K7PM13	Enterobacteria_phage	1.4e-22	52.2
WP_008322446.1\|3461982_3462336_+\|tail	tail attachment protein	K7P6U9	Enterobacteria_phage	2.0e-46	75.2
WP_008322445.1\|3462345_3462900_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	8.0e-74	91.4
WP_003034811.1\|3462896_3463295_+\|tail	tail protein	K7P7G5	Enterobacteria_phage	1.2e-60	82.6
WP_008322443.1\|3463302_3464040_+\|tail	tail protein	O64327	Escherichia_phage	1.6e-93	69.4
WP_008322442.1\|3464076_3464484_+\|tail	phage minor tail protein G	K7PM17	Enterobacteria_phage	5.9e-26	60.7
WP_071524448.1\|3464492_3464813_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	2.7e-34	69.8
WP_008322440.1\|3464790_3467307_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	0.0e+00	70.6
WP_008322439.1\|3467310_3467658_+	hypothetical protein	K7PJT2	Enterobacteria_phage	2.3e-39	69.6
WP_008322437.1\|3468411_3469122_+	peptidase P60	K7P6F5	Enterobacteria_phage	8.2e-140	94.1
WP_008322436.1\|3469151_3469577_+	hypothetical protein	K7PLY8	Enterobacterial_phage	6.6e-12	36.9
WP_008322435.1\|3469632_3470223_+\|tail	tail assembly protein	K7PH91	Enterobacterial_phage	1.0e-74	77.9
WP_008322431.1\|3470353_3470599_-	hypothetical protein	NA	NA	NA	NA
WP_008322430.1\|3470762_3473933_+	host specificity protein J	O64335	Escherichia_phage	0.0e+00	85.6
WP_008322429.1\|3474178_3474451_+	hypothetical protein	NA	NA	NA	NA
WP_008322428.1\|3474447_3475086_+	hypothetical protein	A0A1X7QGJ8	Escherichia_phage	6.5e-11	30.8
WP_008322427.1\|3475158_3476583_+	hypothetical protein	A0A1V0E5M2	Salmonella_phage	1.0e-112	51.1
WP_008322426.1\|3476717_3476960_-	DinI family protein	Q6UAW0	Klebsiella_phage	4.4e-29	76.6
WP_003826234.1\|3477038_3477428_+	DNA polymerase V	Q1MVE7	Enterobacteria_phage	1.0e-51	72.1
WP_008322424.1\|3478111_3478870_+	hypothetical protein	NA	NA	NA	NA
WP_008322423.1\|3479154_3479826_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-80	60.5
WP_003020675.1\|3479977_3480274_-	YciI family protein	NA	NA	NA	NA
WP_003020673.1\|3480498_3481218_+	TonB system transport protein TonB	NA	NA	NA	NA
WP_003020670.1\|3481282_3481684_-	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_003020667.1\|3481849_3482389_-	septation protein A	NA	NA	NA	NA
WP_003020663.1\|3482443_3483187_-	UPF0259 family protein	NA	NA	NA	NA
WP_003020660.1\|3483585_3484239_+	outer membrane protein OmpW	NA	NA	NA	NA
WP_003020658.1\|3484807_3485524_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003020655.1\|3485596_3486055_-	hypothetical protein	NA	NA	NA	NA
WP_003020652.1\|3486294_3486570_+	hypothetical protein	NA	NA	NA	NA
WP_003020649.1\|3486756_3488241_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	8.3e-17	30.8
WP_003020647.1\|3488247_3489054_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_003020645.1\|3489053_3490247_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_003020643.1\|3490257_3491616_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.0e-37	40.7
WP_003020639.1\|3491619_3493215_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.2e-51	38.6
WP_003020636.1\|3493214_3494777_-	anthranilate synthase component 1	NA	NA	NA	NA
WP_071524452.1\|3494871_3494934_-	trp operon leader peptide	NA	NA	NA	NA
WP_003020630.1\|3495051_3495930_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_003020628.1\|3495926_3496547_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_003020625.1\|3496647_3497523_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_003020622.1\|3497606_3498197_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_003020620.1\|3498193_3498955_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	3.0e-07	23.7
WP_032934880.1\|3499176_3500223_+\|protease	protease SohB	NA	NA	NA	NA

DBSCAN-SWA_12

3683696 : 3745875

Escherichia_phage(25.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032425611.1\|3683696_3684728_+\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_003020082.1\|3685242_3686124_-	aromatic amino acid efflux DMT transporter YddG	NA	NA	NA	NA
WP_085952501.1\|3686411_3689459_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
WP_003836226.1\|3689472_3690357_+	formate dehydrogenase N subunit beta	NA	NA	NA	NA
WP_003020054.1\|3690349_3691006_+	formate dehydrogenase-N subunit gamma	NA	NA	NA	NA
WP_003020048.1\|3691135_3691738_+	inorganic diphosphatase	A0A1B1ISK6	uncultured_Mediterranean_phage	4.5e-22	39.1
WP_003020045.1\|3691817_3693533_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	5.8e-38	25.7
WP_003020042.1\|3693842_3695540_-	malate dehydrogenase	NA	NA	NA	NA
WP_003020039.1\|3695719_3695860_-	stationary-phase-induced ribosome-associated protein	NA	NA	NA	NA
WP_003020036.1\|3696087_3696519_+	peroxiredoxin OsmC	NA	NA	NA	NA
WP_008322294.1\|3696566_3697337_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_003020031.1\|3697348_3698740_-	GntP family permease	NA	NA	NA	NA
WP_003020028.1\|3698780_3699704_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_003020025.1\|3699693_3700899_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_003020022.1\|3700909_3701566_-	CoA transferase subunit B	NA	NA	NA	NA
WP_003020020.1\|3701568_3702276_-	CoA transferase subunit A	NA	NA	NA	NA
WP_003020016.1\|3702418_3703309_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_008322292.1\|3703328_3704264_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.2e-14	27.8
WP_003020012.1\|3704256_3705243_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-17	31.5
WP_003020010.1\|3705239_3706136_-	D,D-dipeptide ABC transporter permease	NA	NA	NA	NA
WP_003020008.1\|3706132_3707155_-	ABC transporter permease	NA	NA	NA	NA
WP_003020006.1\|3707199_3708762_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003020004.1\|3708777_3709365_-	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA
WP_003020002.1\|3709379_3710246_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003019999.1\|3710646_3710976_+	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA
WP_003019994.1\|3711131_3713075_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-11	32.8
WP_003836258.1\|3713254_3713569_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003019985.1\|3713561_3714833_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_003019982.1\|3714887_3715406_+	hypothetical protein	NA	NA	NA	NA
WP_003019978.1\|3715402_3716770_-	glycoside hydrolase family 10 protein	NA	NA	NA	NA
WP_003019974.1\|3716782_3717070_-	DUF2132 domain-containing protein	NA	NA	NA	NA
WP_008322283.1\|3717204_3718530_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_003019965.1\|3718532_3720272_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	4.5e-30	34.6
WP_032932590.1\|3720282_3725613_-	heme peroxidase	NA	NA	NA	NA
WP_008322281.1\|3726238_3727441_-	MFS transporter	NA	NA	NA	NA
WP_003019956.1\|3727587_3729054_-	amidohydrolase family protein	NA	NA	NA	NA
WP_083884615.1\|3729211_3729586_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000019450.1\|3729699_3730680_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
WP_003019927.1\|3731642_3731990_+	hypothetical protein	NA	NA	NA	NA
WP_143186488.1\|3732235_3732526_+	hypothetical protein	NA	NA	NA	NA
WP_071687560.1\|3732536_3733058_+	hypothetical protein	NA	NA	NA	NA
WP_117255452.1\|3733743_3734604_+	DNA-binding protein	I6R977	Salmonella_phage	6.4e-62	49.2
WP_117255451.1\|3734618_3735941_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	7.0e-68	34.2
WP_062958097.1\|3736425_3736695_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_071687562.1\|3736697_3736961_+	hypothetical protein	NA	NA	NA	NA
WP_071687563.1\|3736947_3737307_+	hypothetical protein	NA	NA	NA	NA
WP_071687565.1\|3737503_3737689_+	hypothetical protein	NA	NA	NA	NA
WP_153983773.1\|3737748_3738024_+	hypothetical protein	NA	NA	NA	NA
WP_000019450.1\|3738959_3739940_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
WP_071687568.1\|3740533_3740791_+	hypothetical protein	NA	NA	NA	NA
WP_008324315.1\|3741869_3742823_+	hypothetical protein	A0A1D8EQC7	Escherichia_phage	1.0e-07	27.0
WP_008324316.1\|3742819_3743530_+\|plate	phage baseplate protein	NA	NA	NA	NA
WP_008324317.1\|3743539_3743917_+	hypothetical protein	NA	NA	NA	NA
WP_008324318.1\|3744131_3744482_+	hypothetical protein	NA	NA	NA	NA
WP_008324319.1\|3744465_3745875_+\|plate	baseplate component	A0A2D0YGH8	Vibrio_phage	1.6e-17	23.4

DBSCAN-SWA_13

3812096 : 3819217

Stx2-converting_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001000409.1\|3812096_3813632_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	2.0e-260	87.7
WP_000609174.1\|3813681_3814029_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-59	95.7
WP_001201739.1\|3814025_3814409_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.0e-11	50.0
WP_100216202.1\|3814801_3815970_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.4e-166	89.5
WP_008324000.1\|3817422_3818589_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	1.4e-83	46.3
WP_003028915.1\|3818599_3819217_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.6e-76	59.6

DBSCAN-SWA_14

3995097 : 4005135

Cedratvirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003030561.1\|3995097_3995877_+	heme ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.2e-11	27.3
WP_008323845.1\|3995873_3997316_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	5.9e-52	35.3
WP_003030564.1\|3997377_3998091_-	EAL domain-containing protein	NA	NA	NA	NA
WP_003030566.1\|3998407_3998872_-	endopeptidase	A0A1V0DZX6	Clostridioides_phage	2.7e-14	38.2
WP_003030567.1\|3998949_3999699_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	30.3
WP_003030569.1\|3999698_4000250_-	glutathione peroxidase	NA	NA	NA	NA
WP_003030570.1\|4000310_4001291_-	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	1.5e-14	24.8
WP_003030571.1\|4001444_4001744_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_008323842.1\|4001748_4004136_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003030576.1\|4004151_4005135_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-33	38.5

DBSCAN-SWA_15

4099060 : 4104640

uncultured_Caudovirales_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003030760.1\|4099060_4099486_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	7.3e-51	70.7
WP_003030761.1\|4099498_4100788_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	1.2e-165	70.4
WP_003030762.1\|4100832_4101153_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	3.2e-19	44.8
WP_008320415.1\|4101238_4101937_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.8e-89	68.1
WP_008320414.1\|4102013_4102247_-	DNA polymerase V subunit	A0A222YZE2	Escherichia_phage	4.3e-21	78.8
WP_003030766.1\|4102326_4102527_+	DinI-like family protein	Q6UAW0	Klebsiella_phage	7.9e-24	77.3
WP_003030767.1\|4102743_4103253_+	hypothetical protein	NA	NA	NA	NA
WP_003030769.1\|4103389_4104640_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	9.4e-22	94.4

DBSCAN-SWA_16

4295900 : 4339074

Escherichia_phage(40.0%)

protease,integrase,plate,holin,tail,terminase

attL 4294682:4294741|attR 4336217:4336344

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4294682:4294741	attL	NA	NA	NA	NA
WP_153983786.1\|4295900_4296269_-\|tail	phage tail protein	NA	NA	NA	NA
WP_153983787.1\|4297545_4297803_+	hypothetical protein	NA	NA	NA	NA
WP_153983788.1\|4297838_4298543_-	hypothetical protein	NA	NA	NA	NA
WP_110498441.1\|4298544_4299963_-\|plate	baseplate J-like family protein	A0A0U2RJZ0	Escherichia_phage	1.2e-54	45.3
WP_003833581.1\|4299959_4300292_-	hypothetical protein	NA	NA	NA	NA
WP_088760183.1\|4300288_4301005_-	hypothetical protein	A0A0U2JTX5	Escherichia_phage	7.0e-22	30.8
WP_110498442.1\|4301001_4302042_-	hypothetical protein	NA	NA	NA	NA
WP_110498443.1\|4302041_4302317_-	hypothetical protein	NA	NA	NA	NA
WP_153983789.1\|4302313_4303024_-	hypothetical protein	A0A0U2JGI7	Escherichia_phage	5.3e-30	38.1
WP_110498445.1\|4303023_4304850_-	hypothetical protein	A0A2R3UAN6	Myoviridae_environmental_samples	4.9e-19	41.9
WP_110498446.1\|4304973_4305549_-	hypothetical protein	NA	NA	NA	NA
WP_153983790.1\|4305551_4305989_-	hypothetical protein	A0A0U2S616	Escherichia_phage	7.0e-25	38.9
WP_131445529.1\|4305990_4307385_-	hypothetical protein	A0A0U2KD19	Escherichia_phage	6.5e-72	38.3
WP_110498448.1\|4307390_4308329_-	hypothetical protein	A0A0U2SH76	Escherichia_phage	2.2e-52	39.2
WP_131445535.1\|4308312_4308744_-	hypothetical protein	NA	NA	NA	NA
WP_110498450.1\|4308740_4309166_-	hypothetical protein	A0A0U2S646	Escherichia_phage	3.6e-26	43.3
WP_110498451.1\|4309174_4309663_-	hypothetical protein	NA	NA	NA	NA
WP_131445541.1\|4309728_4310760_-	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	5.1e-74	46.5
WP_110498452.1\|4310777_4311650_-	hypothetical protein	NA	NA	NA	NA
WP_131445543.1\|4311670_4313245_-	NUDIX domain-containing protein	Q6UJ14	Burkholderia_virus	1.7e-20	49.5
WP_153983791.1\|4313245_4314121_-	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.1e-53	43.9
WP_153983792.1\|4314092_4315532_-	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	1.3e-91	38.0
WP_153983793.1\|4315531_4316803_-	hypothetical protein	A0A0U2JTW9	Escherichia_phage	4.6e-85	38.8
WP_148977527.1\|4316792_4317764_-\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	1.3e-23	33.5
WP_153983794.1\|4317825_4318236_-	hypothetical protein	NA	NA	NA	NA
WP_131445557.1\|4318225_4318771_-	DUF2514 domain-containing protein	A0A291AXG6	Shigella_phage	1.3e-07	28.7
WP_110498460.1\|4318773_4319190_-	structural protein	A0A0E3GMJ2	Enterobacteria_phage	1.4e-43	58.6
WP_001648823.1\|4319192_4319546_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.7e-53	90.7
WP_115643621.1\|4319991_4320570_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.2e-43	51.4
WP_148977525.1\|4320566_4320860_-	DUF1364 family protein	A0A0U2KD41	Escherichia_phage	2.3e-32	63.2
WP_045441382.1\|4320856_4321453_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.7e-82	74.7
WP_131445566.1\|4321902_4322241_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	8.6e-47	82.1
WP_131445569.1\|4322240_4324313_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	9.6e-205	54.2
WP_131445573.1\|4324309_4324582_-	hypothetical protein	NA	NA	NA	NA
WP_131445576.1\|4324578_4325712_-	site-specific DNA-methyltransferase	A0A060D598	Salmonella_phage	3.9e-99	50.4
WP_131445594.1\|4325708_4325960_-	hypothetical protein	S5MQM0	Escherichia_phage	5.1e-12	52.8
WP_048241297.1\|4325985_4326234_-	hypothetical protein	NA	NA	NA	NA
WP_131445579.1\|4326237_4326918_-	hypothetical protein	NA	NA	NA	NA
WP_153983795.1\|4326956_4328345_-	replicative DNA helicase	Q8HA30	Enterobacteria_phage	9.5e-108	47.5
WP_046595084.1\|4328341_4329325_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.2e-43	79.6
WP_001648809.1\|4329327_4329552_-	hypothetical protein	H9C163	Pectobacterium_phage	4.7e-09	46.1
WP_016152513.1\|4329574_4330021_-	hypothetical protein	H9C162	Pectobacterium_phage	3.2e-25	51.1
WP_050186203.1\|4330085_4330289_-	hypothetical protein	K7PHK4	Enterobacteria_phage	8.0e-08	49.2
WP_050186201.1\|4330367_4330769_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-37	54.9
WP_001648806.1\|4331338_4331662_+	hypothetical protein	NA	NA	NA	NA
WP_153983796.1\|4331707_4333981_+	hypothetical protein	H9C157	Pectobacterium_phage	2.9e-106	35.5
WP_001648803.1\|4333980_4334535_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-50	61.5
WP_016152506.1\|4334537_4334720_+	hypothetical protein	H9C155	Pectobacterium_phage	2.2e-09	51.7
WP_001648801.1\|4334932_4335157_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_110498477.1\|4335157_4336177_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	7.5e-94	54.1
WP_003035920.1\|4336514_4338143_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
4336217:4336344	attR	NA	NA	NA	NA
WP_003035917.1\|4338414_4339074_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	8.9e-48	55.3

DBSCAN-SWA_17

4373812 : 4475064

Cronobacter_phage(30.19%)

integrase,terminase,capsid,head,tail,tRNA,portal,transposase

attL 4369182:4369201|attR 4472343:4472362

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4369182:4369201	attL	NA	NA	NA	NA
WP_003035832.1\|4373812_4375213_+\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	5.0e-80	35.9
WP_117255451.1\|4375875_4377198_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	7.0e-68	34.2
WP_117255452.1\|4377212_4378073_-	DNA-binding protein	I6R977	Salmonella_phage	6.4e-62	49.2
WP_015059991.1\|4379117_4379915_-	carbapenem-hydrolyzing class D beta-lactamase OXA-48	NA	NA	NA	NA
WP_025987686.1\|4380827_4382033_+\|transposase	IS4 family transposase	Q9E8P4	Bluetongue_virus	9.9e-170	72.0
WP_004187429.1\|4382364_4382622_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_020277900.1\|4382590_4382956_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_004187425.1\|4383048_4383483_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.2e-29	55.3
WP_015059993.1\|4383431_4384736_+	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	7.8e-112	50.1
WP_004187413.1\|4384858_4385068_-	hypothetical protein	E5FFJ6	Burkholderia_phage	7.0e-07	42.0
WP_004187411.1\|4385070_4385289_-	hypothetical protein	NA	NA	NA	NA
WP_117255451.1\|4385541_4386864_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	7.0e-68	34.2
WP_117255452.1\|4386878_4387739_-	DNA-binding protein	I6R977	Salmonella_phage	6.4e-62	49.2
WP_003035828.1\|4388107_4389196_+	porin OmpF	Q1MVN1	Enterobacteria_phage	4.8e-99	53.4
WP_003035825.1\|4389379_4390570_+	aspartate transaminase	NA	NA	NA	NA
WP_003035823.1\|4390623_4391271_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003035820.1\|4391299_4391848_-	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	3.5e-05	32.6
WP_008320228.1\|4392025_4393777_-	L,D-transpeptidase	NA	NA	NA	NA
WP_003035811.1\|4394036_4398497_-	chromosome partition protein MukB	NA	NA	NA	NA
WP_003035809.1\|4398496_4399201_-	chromosome partition protein MukE	NA	NA	NA	NA
WP_003035806.1\|4399181_4400504_-	chromosome partition protein MukF	NA	NA	NA	NA
WP_003035803.1\|4400496_4401300_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_003035801.1\|4401435_4402212_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_003035798.1\|4402188_4403082_-	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_003035796.1\|4403246_4403993_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_003035793.1\|4403989_4404172_-	protein YcaR	NA	NA	NA	NA
WP_003035790.1\|4404223_4405456_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003035787.1\|4405497_4406475_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_003035784.1\|4406471_4408220_-	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	2.4e-60	30.7
WP_003035783.1\|4408256_4410521_-	ComEC family protein	NA	NA	NA	NA
WP_003035780.1\|4410727_4411012_-	integration host factor subunit beta	A7KV42	Bacillus_phage	9.2e-10	39.1
WP_003035776.1\|4411171_4412845_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_003035772.1\|4412958_4413642_-	(d)CMP kinase	NA	NA	NA	NA
WP_153983834.1\|4413813_4415097_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003035766.1\|4415166_4416255_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	6.6e-80	46.0
WP_003035760.1\|4416467_4417160_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_003035758.1\|4417296_4419057_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_003035756.1\|4419461_4420319_+	formate transporter FocA	NA	NA	NA	NA
WP_003035753.1\|4420378_4422661_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	3.8e-162	42.0
WP_153983835.1\|4423148_4424387_+	acyltransferase family protein	A0A088CPR9	Enterobacteria_phage	7.3e-27	28.8
WP_153983836.1\|4425524_4427222_-	hypothetical protein	F1BUJ7	Cronobacter_phage	1.4e-169	58.9
WP_048231835.1\|4427221_4427731_-	hypothetical protein	F1BUJ9	Cronobacter_phage	1.9e-34	48.5
WP_048231758.1\|4427777_4428476_-	hypothetical protein	NA	NA	NA	NA
WP_048231836.1\|4428507_4428882_-\|tail	phage tail protein	NA	NA	NA	NA
WP_153983837.1\|4428896_4430546_-	hypothetical protein	F1BUK3	Cronobacter_phage	1.7e-100	61.7
WP_048231759.1\|4430566_4431100_-	protein phage	F1BUK5	Cronobacter_phage	3.8e-65	65.4
WP_153983880.1\|4431092_4432277_-	hypothetical protein	F1BUK6	Cronobacter_phage	1.0e-158	70.3
WP_048231761.1\|4432254_4432599_-	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.2e-33	67.3
WP_048231763.1\|4432595_4434515_-\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	2.7e-113	38.9
WP_048231765.1\|4434702_4434972_-	hypothetical protein	A5X9I7	Aeromonas_virus	4.5e-22	57.6
WP_153983838.1\|4435073_4435451_-	hypothetical protein	F1BUL2	Cronobacter_phage	8.8e-24	53.8
WP_153983839.1\|4435447_4435957_-	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	3.9e-75	80.8
WP_048231769.1\|4435940_4436162_-	hypothetical protein	A0A218M4L5	Erwinia_phage	3.6e-09	43.8
WP_048231771.1\|4436164_4436623_-	DUF2597 family protein	F1BUL4	Cronobacter_phage	4.9e-45	60.5
WP_153983840.1\|4436622_4438146_-	DUF2586 family protein	F1BUL5	Cronobacter_phage	7.2e-109	58.3
WP_153983841.1\|4438148_4438856_-	hypothetical protein	F1BUL6	Cronobacter_phage	3.2e-75	63.6
WP_153983842.1\|4438828_4439335_-\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.1e-36	48.0
WP_153983843.1\|4439331_4439784_-\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	2.1e-32	49.7
WP_153983844.1\|4439880_4440582_-\|terminase	terminase	F1BUM0	Cronobacter_phage	8.3e-52	47.3
WP_153983845.1\|4440590_4441637_-\|capsid	phage major capsid protein, P2 family	Q94MZ4	Haemophilus_virus	5.4e-71	43.7
WP_153983846.1\|4441646_4442510_-\|capsid	phage capsid protein	A5X9H4	Aeromonas_virus	3.3e-34	37.0
WP_153983847.1\|4442691_4444473_+\|terminase	terminase	A5X9H3	Aeromonas_virus	7.2e-201	57.7
WP_153983848.1\|4444469_4445498_+\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.5e-102	50.7
WP_153983881.1\|4445555_4445825_+	hypothetical protein	F1BUM8	Cronobacter_phage	5.1e-18	46.9
WP_153983849.1\|4445868_4446234_-	DUF2528 family protein	K7PGR6	Enterobacteria_phage	3.4e-33	55.8
WP_153983850.1\|4446236_4446431_-	hypothetical protein	NA	NA	NA	NA
WP_153983851.1\|4446433_4449097_-	bifunctional DNA primase/helicase	A0A077K8T2	Ralstonia_phage	1.6e-233	46.8
WP_153983852.1\|4449357_4449918_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	6.5e-23	34.4
WP_153983853.1\|4449927_4450263_-	hypothetical protein	NA	NA	NA	NA
WP_153983882.1\|4450282_4450606_-	hypothetical protein	Q1JS26	Enterobacteria_phage	5.9e-29	65.3
WP_153983854.1\|4450742_4451042_+	XRE family transcriptional regulator	Q1JS29	Enterobacteria_phage	6.7e-43	82.8
WP_153983855.1\|4451135_4452131_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	5.7e-155	79.8
WP_048231800.1\|4452162_4452960_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	7.8e-22	26.5
WP_003035749.1\|4453003_4454425_-	amino acid permease	NA	NA	NA	NA
WP_003035748.1\|4454638_4455787_-	MFS transporter	NA	NA	NA	NA
WP_003035746.1\|4456172_4456799_+	hydrolase	NA	NA	NA	NA
WP_003035744.1\|4456908_4457772_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_003035741.1\|4457773_4458391_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.8e-75	59.1
WP_003035739.1\|4458401_4460846_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	3.5e-222	50.7
WP_003035737.1\|4461082_4462375_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.3e-94	46.1
WP_003035735.1\|4462467_4463811_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	1.3e-80	40.8
WP_008320214.1\|4463821_4464433_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_153983856.1\|4464544_4468567_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.9e-88	49.2
WP_002439523.1\|4468701_4469196_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_008320202.1\|4469743_4470712_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.3
WP_003035725.1\|4470826_4472593_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	1.8e-23	25.6
4472343:4472362	attR	NA	NA	NA	NA
WP_003035722.1\|4472593_4474315_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.4e-15	23.6
WP_003035721.1\|4474359_4475064_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA

DBSCAN-SWA_18

5094061 : 5143361

Stx2-converting_phage(33.33%)

transposase,protease,capsid,integrase

attL 5096767:5096784|attR 5139254:5139271

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003838722.1\|5094061_5094643_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
WP_008321015.1\|5094648_5095053_+	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
WP_008321017.1\|5095049_5095907_+	hydrogenase expression/formation protein	NA	NA	NA	NA
WP_008321019.1\|5095995_5097540_+	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA
5096767:5096784	attL	NA	NA	NA	NA
WP_008321021.1\|5097551_5098688_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_003838732.1\|5098701_5098791_+	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA
WP_008321024.1\|5098843_5099557_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_008321026.1\|5099749_5101219_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_003838738.1\|5101342_5101792_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_008321029.1\|5101959_5102964_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.4e-23	28.3
WP_003838742.1\|5103117_5104569_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_003838744.1\|5104581_5105763_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_008321031.1\|5105928_5107407_-	hypothetical protein	NA	NA	NA	NA
WP_008321033.1\|5107934_5109137_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_008321035.1\|5109257_5109458_-	glycogen synthase	NA	NA	NA	NA
WP_008321037.1\|5109687_5109897_-	hypothetical protein	NA	NA	NA	NA
WP_008321040.1\|5110029_5111064_-\|capsid	phage capsid protein	NA	NA	NA	NA
WP_008321041.1\|5111079_5111421_-	hypothetical protein	NA	NA	NA	NA
WP_008321043.1\|5111989_5114149_-	hypothetical protein	A0A2H4YH07	Raoultella_phage	6.6e-07	36.2
WP_008321044.1\|5114197_5114593_-	hypothetical protein	NA	NA	NA	NA
WP_008321046.1\|5114749_5115235_-	hypothetical protein	NA	NA	NA	NA
WP_008321048.1\|5115248_5116166_-	hypothetical protein	NA	NA	NA	NA
WP_008321052.1\|5116440_5116884_-	hypothetical protein	NA	NA	NA	NA
WP_008321055.1\|5118923_5119484_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SCL7	Streptococcus_phage	1.8e-17	34.6
WP_008321059.1\|5120164_5120557_-	hypothetical protein	NA	NA	NA	NA
WP_008321061.1\|5121321_5122641_+\|integrase	integrase family protein	A0A221SAN4	Ralstonia_phage	4.5e-06	27.7
WP_008321066.1\|5123521_5124286_+	hypothetical protein	NA	NA	NA	NA
WP_008321072.1\|5124747_5125368_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_003029581.1\|5125423_5126080_-	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	6.2e-09	82.1
WP_003029582.1\|5126108_5126417_-	maltose O-acetyltransferase	NA	NA	NA	NA
WP_077258089.1\|5126926_5127097_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003029584.1\|5127325_5128249_+	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_003029587.1\|5128414_5129932_+	carbohydrate porin	NA	NA	NA	NA
WP_000345204.1\|5130069_5131440_+	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA
WP_003029589.1\|5131439_5132840_+	sucrose-6-phosphate hydrolase	F8WPR5	Bacillus_phage	2.0e-20	26.1
WP_003029591.1\|5132869_5133874_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_008321087.1\|5137416_5138877_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_001548946.1\|5138877_5140899_+	DUF262 domain-containing protein	NA	NA	NA	NA
5139254:5139271	attR	NA	NA	NA	NA
WP_001201739.1\|5141048_5141432_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.0e-11	50.0
WP_000609174.1\|5141428_5141776_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-59	95.7
WP_001000409.1\|5141825_5143361_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	2.0e-260	87.7

DBSCAN-SWA_19

5166762 : 5207816

Salmonella_phage(48.21%)

integrase,plate,capsid,holin,tail

attL 5166531:5166576|attR 5207831:5207876

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5166531:5166576	attL	NA	NA	NA	NA
WP_061549414.1\|5166762_5167308_-	recombinase family protein	K7PJT4	Enterobacteria_phage	3.1e-86	87.2
WP_153983797.1\|5167383_5167752_-\|tail	phage tail protein	NA	NA	NA	NA
WP_153983798.1\|5167761_5168883_-	hypothetical protein	A0A0M3ULD8	Salmonella_phage	1.2e-60	61.5
WP_061549416.1\|5168882_5169563_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	2.5e-109	81.4
WP_153983799.1\|5169559_5170759_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	1.8e-179	82.7
WP_016239889.1\|5170759_5171113_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	1.1e-44	76.1
WP_048219596.1\|5171112_5171853_-\|plate	phage baseplate assembly protein V	A0A0M5M1K7	Salmonella_phage	2.6e-72	62.0
WP_061549418.1\|5171918_5172641_-	hypothetical protein	NA	NA	NA	NA
WP_061549419.1\|5172648_5173713_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	7.2e-140	67.1
WP_001160174.1\|5173715_5174021_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	9.2e-24	53.5
WP_153983800.1\|5174022_5174625_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	5.6e-65	70.1
WP_153983801.1\|5174624_5176628_-	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	1.3e-193	55.1
WP_112899804.1\|5176805_5177231_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	3.5e-37	56.7
WP_000257257.1\|5177234_5177675_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	7.5e-59	77.4
WP_153983802.1\|5177685_5178846_-	DUF3383 family protein	A0A2H4J8G4	uncultured_Caudovirales_phage	5.4e-157	73.8
WP_153983875.1\|5178849_5179413_-	hypothetical protein	A0A0M4R331	Salmonella_phage	3.8e-79	75.1
WP_001515083.1\|5179387_5179777_-	hypothetical protein	A0A0M3ULK0	Salmonella_phage	2.7e-68	98.4
WP_147679414.1\|5179763_5180351_-	hypothetical protein	A0A0M4S631	Salmonella_phage	7.6e-75	76.9
WP_153983803.1\|5180347_5180755_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	2.1e-71	97.0
WP_001040703.1\|5180720_5181110_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	6.5e-30	57.4
WP_153983804.1\|5181151_5182093_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	9.4e-176	97.4
WP_032177172.1\|5182104_5182608_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.2e-74	84.4
WP_153983805.1\|5182612_5183845_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	5.3e-219	93.7
WP_153983876.1\|5183859_5184597_-\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	1.3e-108	95.5
WP_153983806.1\|5184481_5185951_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.5e-268	95.1
WP_048219616.1\|5185950_5187573_-	bacteriophage TerL protein	A0A0M5M1R6	Salmonella_phage	4.5e-311	95.6
WP_153983807.1\|5187575_5188049_-	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	3.6e-51	68.0
WP_001081498.1\|5188080_5188701_-	hypothetical protein	I6S676	Salmonella_phage	4.4e-89	73.2
WP_029403918.1\|5188755_5188941_-	hypothetical protein	NA	NA	NA	NA
WP_048219618.1\|5189084_5189477_-	hypothetical protein	A0A192Y6H8	Salmonella_phage	1.7e-46	75.0
WP_153983808.1\|5189473_5190088_-	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	1.4e-98	90.1
WP_048219622.1\|5190090_5190438_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.0e-47	82.4
WP_082138498.1\|5190695_5191379_-	hypothetical protein	Q8HA89	Salmonella_phage	4.9e-41	44.1
WP_045354712.1\|5191375_5191738_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.7e-38	65.5
WP_052674422.1\|5191728_5192211_-	AsnC family protein	A0A068CBG2	Acinetobacter_phage	5.2e-37	51.5
WP_044702921.1\|5192207_5192507_-	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	5.1e-43	88.0
WP_061549425.1\|5192496_5192949_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-38	53.1
WP_061549426.1\|5193189_5193528_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.9e-50	85.7
WP_061549427.1\|5193520_5193922_-	hypothetical protein	A0A1I9LJU8	Stx_converting_phage	1.5e-45	75.0
WP_082805395.1\|5193914_5194601_-	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	9.6e-45	85.4
WP_061549428.1\|5194602_5195298_-	hypothetical protein	A0A1W6JP46	Morganella_phage	5.0e-25	32.3
WP_153983809.1\|5195294_5195462_-	hypothetical protein	NA	NA	NA	NA
WP_048219627.1\|5195458_5195749_-	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	1.8e-29	65.2
WP_153983810.1\|5195748_5197146_-	AAA family ATPase	Q9MCT4	Escherichia_phage	3.3e-169	63.8
WP_108961704.1\|5197142_5197955_-	replication protein	A0A1R3Y5R9	Salmonella_virus	7.9e-54	45.0
WP_000426372.1\|5198423_5198744_-	hypothetical protein	H6WRX6	Salmonella_phage	2.9e-44	88.7
WP_108961705.1\|5198781_5199009_-	transcriptional regulator	K7P6H5	Enterobacteria_phage	1.9e-18	69.0
WP_108961706.1\|5199129_5199843_+	helix-turn-helix domain-containing protein	M9NZE3	Enterobacteria_phage	1.7e-113	83.1
WP_061549435.1\|5199854_5200283_+	hypothetical protein	NA	NA	NA	NA
WP_061549442.1\|5200396_5200606_+	hypothetical protein	C6ZR45	Salmonella_phage	4.2e-12	60.9
WP_108961707.1\|5200627_5200825_-	hypothetical protein	G8C7T7	Escherichia_phage	1.3e-10	53.1
WP_000501155.1\|5201241_5201439_+	DUF1482 family protein	NA	NA	NA	NA
WP_153983811.1\|5201449_5201722_+	hypothetical protein	S4TU79	Salmonella_phage	2.7e-27	61.1
WP_109863254.1\|5201761_5202352_+	hypothetical protein	A0A291AXG3	Shigella_phage	1.0e-10	31.7
WP_044702471.1\|5202582_5203023_+	hypothetical protein	Q6WYF0	Enterobacteria_phage	1.3e-26	46.7
WP_044702473.1\|5203015_5203702_+	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	3.6e-15	36.6
WP_016243544.1\|5203698_5204370_+	AAA family ATPase	G9L667	Escherichia_phage	8.8e-51	46.6
WP_045399452.1\|5204386_5205073_+	hypothetical protein	A0A088C400	Shewanella_sp._phage	2.0e-26	40.8
WP_021571176.1\|5205084_5205243_+	DUF1317 family protein	A0A1U8QQC1	Enterobacteria_phage	3.3e-09	56.9
WP_031275321.1\|5205293_5206145_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4R347	Salmonella_phage	3.2e-138	84.3
WP_031275320.1\|5206147_5206387_+	DUF4060 family protein	S4TR31	Salmonella_phage	1.2e-31	87.3
WP_021242885.1\|5206652_5207816_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.1e-153	67.2
5207831:5207876	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP038657

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP038656

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection