CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043547	Planctomycetales bacterium 10988 chromosome, complete genome	4 crisprs	RT,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,PD-DExK,PrimPol,csa3,WYL,cas8u1,csb2gr5,DinG,cas8b3,cas6	0	8	15	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043547_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043547_1

452895-454520

TypeI

I-C

Consensus_repeat	Method
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CRISPRCasFinder
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CRT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	PILER-CR

24 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP043547_1

>merge|NZ_CP043547|1|452895-454520|CRISPRCasFinder,CRT,PILER-CR
CGTTGCAATTACGCTCCCGCGCGGGGAGCGACAAAAGGCTGGTAGCAATGGCTGGGGGTCGCGCAACAGTTTCAATCCACGCTCCCGCGCGGGGAGCGACAAGTCGTGGCTGAAAGAGTGTTCGAAGGAAAGCCGTTTCAATCCACGCTCCCGCGCGGGGAGCGACGCAAGCAGTTAAGCGAACCCGTTGACGGTATCAACGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCTGCTTGTTCTTCCGTTCTTCGTCACCCTCTAACGTGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCACGCAAGAAGTTCGTTTTGGTTATCTGGCATTGTTTCAATCCACGCTCCCGCGCGGGGAGCGACAAGTGCCCGTGCATCCCCGTGACGCTACCACCTACGGTTTCAATCCACGCTCCCGCGCGGGGAGCGACATGGACGACCGACTACGGTCGATCGAATCTGGACCTGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCACACGAAACACGTTTGGGCTAGGGATTTCGAAGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCTTCGGATAATCTGTCCAAGTGTCCACCTTTCGGGTTTCAATCCACGCTCCCGCGCGGGGAGCGACTTCGTCGCAAATGTGTTTTATGTGCCAATTATCTTGTTTCAATCCACGCTCCCGCGCGGGGAGCGACATTGCTGCCGGTAAAATGGCGCTCGCTCACACGGAGTTTCAATCCACGCTCCCGCGCGGGGAGCGACAAGGAATTAAAATGCCGAGACAAAAAAAAGAATTGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCCCGCTTGTTCTACGGGGTCGTCGCGGACAAACAGTTTCAATCCACGCTCCCGCGCGGGGAGCGACTGGCGGAGAACGCCGAGTCCGCCGAAGACGACGCGTTTCAATCCACGCTCCCGCGCGGGGAGCGACTAGCCAATCAAGTATTTTATTGGCCGTTGGTAGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCAGACAAGCGGTACATCAGCGCCAAATCAAAAGATGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCGGCGTCCTTTGTGATTGTATCTTGCAAGAACGAAGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCGCGAAAGACACGGAAGGCGTTGTAGCCGAAACGGTTTCAATCCACGCTCCCGCGCGGGGAGCGACCATTCGTTGGGGCAGTTAGAAGACCCTAACGGTGTTTCAATCCACGCTCCCGCGCGGGGAGCGACTCGACAAGGCATGGGACGCGGCAACAGGCGTGTGGTTTCAATCCACGCTCCCGCGCGGGGAGCGACAAATCAACTCCAACTGCTTTCGACTCGCGCCTATGTTTCAATCCACGCTCCCGCGCGGGGAGCGACTGTACCAAGGTTCGATCGGGAACGTATAGACTAGGTTTCAATCCACGCTCCCGCGCGGGGAGCGACAGCAGTTGGAGTTGATTTGTAGCGACGGGACTATCGTTTCAATCCACGCTCCCGCGCGGGGAGCGACTGGCGGAAGGACGGGCGGAATATAAGCGTAGGAGAGTTTCAATCCACGCTCCCGCGCGGGGAGCGAC

>NZ_CP043547|1|1|452895-454520|CRISPRCasFinder
CGTTGCAATTACGCTCCCGCGCGGGGAGCGAC	AAAAGGCTGGTAGCAATGGCTGGGGGTCGCGCAACA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGTCGTGGCTGAAAGAGTGTTCGAAGGAAAGCC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	GCAAGCAGTTAAGCGAACCCGTTGACGGTATCAAC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CTGCTTGTTCTTCCGTTCTTCGTCACCCTCTAACGT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CACGCAAGAAGTTCGTTTTGGTTATCTGGCATT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGTGCCCGTGCATCCCCGTGACGCTACCACCTACG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	ATGGACGACCGACTACGGTCGATCGAATCTGGACCT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CACACGAAACACGTTTGGGCTAGGGATTTCGAA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CTTCGGATAATCTGTCCAAGTGTCCACCTTTCGG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TTCGTCGCAAATGTGTTTTATGTGCCAATTATCTT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	ATTGCTGCCGGTAAAATGGCGCTCGCTCACACGGA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGGAATTAAAATGCCGAGACAAAAAAAAGAATT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CCCGCTTGTTCTACGGGGTCGTCGCGGACAAACA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGGCGGAGAACGCCGAGTCCGCCGAAGACGACGC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TAGCCAATCAAGTATTTTATTGGCCGTTGGTA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CAGACAAGCGGTACATCAGCGCCAAATCAAAAGAT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CGGCGTCCTTTGTGATTGTATCTTGCAAGAACGAA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CGCGAAAGACACGGAAGGCGTTGTAGCCGAAACG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CATTCGTTGGGGCAGTTAGAAGACCCTAACGGT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TCGACAAGGCATGGGACGCGGCAACAGGCGTGTG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAATCAACTCCAACTGCTTTCGACTCGCGCCTAT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGTACCAAGGTTCGATCGGGAACGTATAGACTAG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AGCAGTTGGAGTTGATTTGTAGCGACGGGACTATC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGGCGGAAGGACGGGCGGAATATAAGCGTAGGAGA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC

>NZ_CP043547|1|1|452895-454520|CRT
CGTTGCAATTACGCTCCCGCGCGGGGAGCGAC	AAAAGGCTGGTAGCAATGGCTGGGGGTCGCGCAACA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGTCGTGGCTGAAAGAGTGTTCGAAGGAAAGCC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	GCAAGCAGTTAAGCGAACCCGTTGACGGTATCAAC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CTGCTTGTTCTTCCGTTCTTCGTCACCCTCTAACGT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CACGCAAGAAGTTCGTTTTGGTTATCTGGCATT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGTGCCCGTGCATCCCCGTGACGCTACCACCTACG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	ATGGACGACCGACTACGGTCGATCGAATCTGGACCT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CACACGAAACACGTTTGGGCTAGGGATTTCGAA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CTTCGGATAATCTGTCCAAGTGTCCACCTTTCGG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TTCGTCGCAAATGTGTTTTATGTGCCAATTATCTT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	ATTGCTGCCGGTAAAATGGCGCTCGCTCACACGGA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGGAATTAAAATGCCGAGACAAAAAAAAGAATT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CCCGCTTGTTCTACGGGGTCGTCGCGGACAAACA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGGCGGAGAACGCCGAGTCCGCCGAAGACGACGC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TAGCCAATCAAGTATTTTATTGGCCGTTGGTA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CAGACAAGCGGTACATCAGCGCCAAATCAAAAGAT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CGGCGTCCTTTGTGATTGTATCTTGCAAGAACGAA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CGCGAAAGACACGGAAGGCGTTGTAGCCGAAACG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CATTCGTTGGGGCAGTTAGAAGACCCTAACGGT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TCGACAAGGCATGGGACGCGGCAACAGGCGTGTG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAATCAACTCCAACTGCTTTCGACTCGCGCCTAT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGTACCAAGGTTCGATCGGGAACGTATAGACTAG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AGCAGTTGGAGTTGATTTGTAGCGACGGGACTATC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGGCGGAAGGACGGGCGGAATATAAGCGTAGGAGA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC

>NZ_CP043547|1|1|452963-454520|PILER-CR
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGTCGTGGCTGAAAGAGTGTTCGAAGGAAAGCC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	GCAAGCAGTTAAGCGAACCCGTTGACGGTATCAAC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CTGCTTGTTCTTCCGTTCTTCGTCACCCTCTAACGT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CACGCAAGAAGTTCGTTTTGGTTATCTGGCATT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGTGCCCGTGCATCCCCGTGACGCTACCACCTACG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	ATGGACGACCGACTACGGTCGATCGAATCTGGACCT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CACACGAAACACGTTTGGGCTAGGGATTTCGAA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CTTCGGATAATCTGTCCAAGTGTCCACCTTTCGG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TTCGTCGCAAATGTGTTTTATGTGCCAATTATCTT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	ATTGCTGCCGGTAAAATGGCGCTCGCTCACACGGA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAGGAATTAAAATGCCGAGACAAAAAAAAGAATT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CCCGCTTGTTCTACGGGGTCGTCGCGGACAAACA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGGCGGAGAACGCCGAGTCCGCCGAAGACGACGC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TAGCCAATCAAGTATTTTATTGGCCGTTGGTA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CAGACAAGCGGTACATCAGCGCCAAATCAAAAGAT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CGGCGTCCTTTGTGATTGTATCTTGCAAGAACGAA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CGCGAAAGACACGGAAGGCGTTGTAGCCGAAACG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	CATTCGTTGGGGCAGTTAGAAGACCCTAACGGT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TCGACAAGGCATGGGACGCGGCAACAGGCGTGTG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AAATCAACTCCAACTGCTTTCGACTCGCGCCTAT
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGTACCAAGGTTCGATCGGGAACGTATAGACTAG
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	AGCAGTTGGAGTTGATTTGTAGCGACGGGACTATC
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC	TGGCGGAAGGACGGGCGGAATATAAGCGTAGGAGA
GTTTCAATCCACGCTCCCGCGCGGGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043547.1\|WP_153987318.1\|454999_456034_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP043547.1\|WP_153987326.1\|467282_470249_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|377447
NZ_CP043547.1\|WP_153987311.1\|448707_448941_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153987325.1\|463437_466845_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320700
NZ_CP043547.1\|WP_153987310.1\|448460_448673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153987315.1\|452084_452306_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153987317.1\|454706_454997_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP043547.1\|WP_153987308.1\|447687_447930_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153987312.1\|448943_450080_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238082
NZ_CP043547.1\|WP_153987319.1\|456045_456759_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP043547.1\|WP_153987309.1\|447981_448380_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153987313.1\|450480_451167_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_162010192.1\|460422_462669_-\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP043547.1\|WP_153987324.1\|463054_463441_+\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP043547.1\|WP_153987321.1\|457716_459549_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP043547.1\|WP_153987316.1\|452325_452853_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP043547.1\|WP_153987314.1\|451310_452036_+\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|370378
NZ_CP043547.1\|WP_153987322.1\|459545_460211_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP043547.1\|WP_153987320.1\|456836_457706_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP043547.1\|WP_153987307.1\|446721_447672_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043547.1\|WP_153987318.1\|454999_456034_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP043547.1\|WP_153987325.1\|463437_466845_+\|M48-family-metalloprotease	gnl\|CDD\|320700	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	8.03676e-58
NZ_CP043547.1\|WP_153987319.1\|456045_456759_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.84188e-34
NZ_CP043547.1\|WP_153987317.1\|454706_454997_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.48296e-32
NZ_CP043547.1\|WP_153987312.1\|448943_450080_+\|hypothetical-protein	gnl\|CDD\|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	1.87194e-07
NZ_CP043547.1\|WP_162010192.1\|460422_462669_-\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.88167e-55
NZ_CP043547.1\|WP_153987326.1\|467282_470249_+\|glycosyltransferase	gnl\|CDD\|377447	pfam05045, RgpF, Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.	6.2924e-32
NZ_CP043547.1\|WP_153987321.1\|457716_459549_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP043547.1\|WP_153987324.1\|463054_463441_+\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	9.53349e-27
NZ_CP043547.1\|WP_153987316.1\|452325_452853_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.44053e-08
NZ_CP043547.1\|WP_153987314.1\|451310_452036_+\|DUF1963-domain-containing-protein	gnl\|CDD\|370378	pfam09234, DUF1963, Domain of unknown function (DUF1963). This domain is found in a set of hypothetical bacterial proteins. Its exact function has not, as yet, been described.	4.3135e-26
NZ_CP043547.1\|WP_153987322.1\|459545_460211_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.68235e-95
NZ_CP043547.1\|WP_153987320.1\|456836_457706_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.51453e-147

>NZ_CP043547.1|WP_153987316.1|452325_452853_+|hypothetical-protein
MHQSIRLNPAEPMPLYTCAEIAILQGQHRTALAYANRILRLEPEKAEGYFLRGIAYQEQQAFVEAKCDFSLGLQHDEKNVKLLTMRALLLATCLDEDIRDGQQAVIDAHLACTLTGWSQSFQLRALAAAYAEQGDFPHAQQVADLAIQHAGPEKSFVTHFLAPILKNQPIRMKYE
>NZ_CP043547.1|WP_153987315.1|452084_452306_+|hypothetical-protein
MEHQCYGPVMLAIVQRDHVVMELPTSNYPSPLETDFSDDFVRMELCDAAIDLDRFSVVGLILRGLDHSFLQEH
>NZ_CP043547.1|WP_153987314.1|451310_452036_+|DUF1963-domain-containing-protein
MDIETLKKYIDSIESVAPHSDFLLGLANPCVSIKLADGKEIIESGSRFGGHPFLPTDFQWPTHEVGEYRFLGQINFAEIVNRPASLPDSGLLAIFYAFDEDGEVFWGDDGYVLGFYWPDFDGHSIFDSPTEEVPDSIAIELTGGIDIPRHEDLRSDWPFDGDALYEFTDALEGNSEYLLGYPSFTSLAYNPTPDGDWISLLTVHSLDEFDWCWHDGDKLMIFIETDRLADRDFSNLKSDAG
>NZ_CP043547.1|WP_153987313.1|450480_451167_+|hypothetical-protein
MDATSPHSNWKFTALAILLLLVTVAIFFGGVYWSISSAWSAFSELDKTVAVAIVTASATIVGSTLAVVIGRYLEHKKEGDALHRDKKIAMYDEFLVQLFKLFANEDENTTDEEEQERDMVAYLRESQRKFLLWSGPKVIREYSEWQKNLKSGQLNATTIFQMETFFLALRRDLGHSNRGIQRGDMIHFILRHTDLFLEAAKQNPNITLSQLADLESKLELNKPDENTA
>NZ_CP043547.1|WP_153987312.1|448943_450080_+|hypothetical-protein
MITLTRKQLRTARSLLRRTLGLRSRNDQTPVEIAATAQGTSVRAASQKFALEYRLPGNPEMETIVLPYATLVECEGTRQDPVRVHTAKDQVVLQWEEKGFPQCIWTDVKSASNFPARPEEMQENPSSLLTILAEAVAITSKESSRFALDCCRLRGSDGQLAATDGRQALVQAGFDFPWEEGLLIPACPGFTAKEFLNEKPVRMGKTEDWVAIQSGPCTIWSRIDQQRRFPEIDRITPKESEASTTLTLTDHDASFLHSALSRLPGKEEYNAPITLDLSETPIIRAKSANHPTTELLLCQSTCIGEKLRCCTNRLYLARAIELGFLSFRLKDANSPILCHKNSKTYFWAPLDQSGVLPPEENSLQIESAPPKLAATNAA
>NZ_CP043547.1|WP_153987311.1|448707_448941_-|hypothetical-protein
MSPWFARAVGIWFETLSRGWQPTLEEGASGEDVSRKQPHEDHAGADKDGTEKADDREKAQALVNRISIGRCGPIVWQ
>NZ_CP043547.1|WP_153987310.1|448460_448673_+|hypothetical-protein
MTQRELDQVIATQTGKPLGEIQRIGFSLVEPFYVSSITEDPDDPPDVLDWDDPDHLVPTATISSLDTFQD
>NZ_CP043547.1|WP_153987309.1|447981_448380_+|hypothetical-protein
MSSSTEPSHAQAVSHQVTAFIEGLKEAIVVSMAAAAEGIRLESEVARVMQRMGAYHAVLEGIESQKQALRDLLKQNRSAAEKESLRFQLKLLDQQTIAVLTRSGLPAEVAKQTVAKQLSEPARDAKGRIAKN
>NZ_CP043547.1|WP_153987308.1|447687_447930_+|hypothetical-protein
MELLIQPTGTVRCLYDETLPLRELGSVSIRRGSHVEPDADGRWSADLSPVDGPLLGPFTTRSEALAAEVQWLQQHWLFPQ
>NZ_CP043547.1|WP_153987307.1|446721_447672_+|hypothetical-protein
MTTITETSTSTTVQNQVASTRLRATMAAARLSFTWLGVRKSLNAQQKNQAADSFGAEGRFLSAGKKVIDTTHPAYKAVTAIRSQALSYWKGMSLPFPEVGIRLIRQDTLGEFDARIAGFREQLEGAVLELDHHYDELRQQARERLGDLFDPRDYPPTLLGMFGIEHDYPSIEPPNYLRQLNPELYQQECQRVQARFEEAVQLAEQAFTEELTKLIEHLHERLSGETDGNPKIFRDSAITNLTEFFERFRTLNIRSNAQLDELVSQARGIMQGVQPQYLRDSGVLREQIATQLSAVQTSLDDLLIDRPRRNILRKPR
>NZ_CP043547.1|WP_153987317.1|454706_454997_-|CRISPR-associated-endonuclease-Cas2
MFVLVTYDVNTESKEGRKRLRRTAKTCLDWGQRVQHSVFEIIVDPAQWAECKQRLVSIIDPQTDSLRFYYLGSSWQQKVEHVGAKPSLDMEGPLIF
>NZ_CP043547.1|WP_153987318.1|454999_456034_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKQHLNTLFVTTEGSYLGKDGQAIAIRQEQKIVHRVPLHNLGGVVCFGRISASPQLMAACAESGVTLSFVDDHGRFRAAVVGYTPGNVLLRRTQYRWADDETKSLSVAQQIVAAKIANSRSVLQLGIRDFTSSPSKTTSLQRASDLLAVHLQDARRANNLDQLRGIEGQAAHLYFDTFPELITLSDPAFSFEKRSRRPPLDPVNCLLSFLYAMLAHDLRSACECAGLDAAVGFLHRDRPGRPGLALDLMEEFRPFLVDRLVLSLINRRQVNPDGFETTASGAVRMTDNTRKTVLVAYQKRKQQELIHPFLHEKTSIGLFFHLQARLLARHLRGDLDAYPPFLWR
>NZ_CP043547.1|WP_153987319.1|456045_456759_-|CRISPR-associated-protein-Cas4
MFVEEDLLPISALQHLIFCPRQCALIHLERLWSENVLTVTGQHLHQRAHSFQSGWKENVYTARSLKVRSLRYGLFGQTDVVDFVAPSEKTRMTFQSLISSERSLSDWEIVPCEYKRGRPKKDASDRVQLCAQAICLEEMLAVEIPVGFLFYGKRRRKTKVLFDRTLRNETVTTIDQLHALIRSRETPPAVYEPKCDACSLFNLCLPKLTRPQSASVYLDQSLSQHLKATGPTTDLSP
>NZ_CP043547.1|WP_153987320.1|456836_457706_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MNRIDFVYLFDVKDGNPNGDPDAGNLPRLDAETGEGLVTDVCLKRKIRNFVGLVKEEQPPFEIYVKEKAVLNRLHERSYADAKLKPVSKKLPKKEEDARRITSWMCQNFFDVRTFGAVMTTEVNAGQVRGPVQLTLSRSVHPIVSQEHAVTRCAVTNEKDLEKERTIGRKFTIPYALYRGHGFFNANLAEKTHFNENGEDLDLLWQAFLQMFDHDRSAARGEMSACKLILFEHDSPLGSAPARKLFDAVSVRLKPEVEKDGRPPRDFSDYEVVIDSDSIPDSITVIEKL
>NZ_CP043547.1|WP_153987321.1|457716_459549_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQSLNAFYHRLEADPKAEVAPFGFTEQKISFCVVIESDGSLHQIREVGTREKNKLIPDLVLVPGDAKPSGAGINPCFLWDNPAYLLGFKQDDKKPERTLQSFEAFRERHLRLEEEIKNEEFSSVCRFLETWNPGSISTEIIDTLNALETGFGVFKLRGKTHYVHDQEAIQTWWKEQLTGEEASSQEVVGQCLITGETDRIAQLHNPAIKGISGAQSSGAKLVSFNCDAFESYGKSQSFNAPVSEKAAFNYCTALNYLLRDDDRRIQLGDTRVVFWTDQPSPAEDVFGPMTTGVEPEDKSLKENLERVLKQITSGSFPHETLGSPKTNFYLLGLSPNAARLSIRFWMISTVGEVMQHLGEHYRDLELIGSDRDPRYPPPYRLLRQTAREAKDIPPLLEGSLLRAIWSGGLYPDALYNQILRRIRADRLVNYFRAATLKAVLNRKIRFSNKRPESPRLTAIEKELPVSLDPDRPELAYQLGRLFAVLDSAQKKAIPELTDTIKDRYYSSASATPASVFPRLIRLNQHHLGKLRKKLNDQETETEEVSKETKPKFRGRSYFEGEIERIMNKIDDFPKHLNLTQQGLFAIGFYHQRTRHLVTNSQLSNLDKE
>NZ_CP043547.1|WP_153987322.1|459545_460211_-|type-I-C-CRISPR-associated-protein-Cas5
MKKIQKFCLRVWGDFALFTRGESKAERLSYECMTPSAARGVIEAIYWKPQITWRIDRIHVMNPVRWTNLRRNEVKSKIPKNTVTSAMKAGKGNLGFYVDDGDNRQQRASTLLRDVEYLIEAHFIPCGSDEPLEKHSEMFRRRAEKGQAFSTPYLGTREFPADFELITDTIPESPLAELPEGNRTLGWMLHDIDFQNGMQPRFFHAELKRGVVEVPPWEDLS
>NZ_CP043547.1|WP_162010192.1|460422_462669_-|CRISPR-associated-endonuclease-Cas3''
MFYGHSLPGKPQNDWEKLEDHLSEVASAAEKFAEAFQAGPWGELIGRWHDLGKYSDAFQKYILQDQAAHIETTAGKVDHSTAGAKWATVSQGQQEIIDRILSHAIAAHHTGLLNSTHEDGSEGSLEARLKKPIPEFEQNVPQEIGIRTKLAPPGHLRRDPKEPDRFEFQLSLFTRMLFSCLVDADFLRTEAFYDQSKTKSRQVTVHSFEHWADALELHFESFKPKPGEEQSEVNRVRAEVLKSCLSAADFPPGLFSLTVPTGGGKTLASLAFAFRHAKVHPDQNFRKVIFAIPFTSIIEQTARVYREAFPNFQDQILEHHSNFDSEKETPWSRLAAENWDAPLVVTTNVQFFESFFARKTSRCRKLHRVARSVIILDETQTLPVKYLDPCLSLLRELAFGYGCTIVFCTATQPAINQRKDFPIGLEEVREIIPEPKKLYRQLKRVKTELLGQLLQEQLIERLIQEEQTLCVVNSRQLAAGLFAALEEKQGENKAHFHLSTRMCAAHREAVLADIRNRLKDGLPCRVISTQLIEAGVDVDFPAVYRMLAGLDSIAQAAGRCNREGKRPFGKVYLFELKDAVSPKMFDQAISHTKEVLPDFPDDPLCLEAIEQYFQLHYWGQSSLWKKSKVMKALQVGDAKFQFRDADENFRFIDETGQPVLVNWDEDSEKLINQLRSDTRPDWRIQRKLQRYVVNVEEKQFRAFQNKGDINLEPLHDQYFILDNKNCYDEKKGLNPERAGIISPESSII
>NZ_CP043547.1|WP_153987324.1|463054_463441_+|BlaI/MecI/CopY-family-transcriptional-regulator
MARPASSQPTEVELQILRILWDDGPSIARHVHDSLQAFKQTTYSTTVKMLAVMLEKGLLRRDDRARPQIYRPAVPRQRTQKRMLKDLIDKVYDGSAGVLMLHALSSKKASPEEIAEIRRLLDELEGGK
>NZ_CP043547.1|WP_153987325.1|463437_466845_+|M48-family-metalloprotease
MNSEWMAQLLERFGWTVLHSTWQFALIGVVLFVLLTLLRRLSSSIRYGLECVALTAMVVSFGITFLSLGNLTESTEHNSDSAAIRREPTALSSSNSGQRTGQAPSLAPVGQAQFAEGVTTTKTPKESTEASLSNEKAKTTFWNDLFLQWKTHIGHFFQPWLKTVCLCWLLGMGLLSLRPLIGWRKLHQVRNTGTTEVDRGFHTLVIRLSRQLGIKGRVQVVQSSLVQVPSVLGWMKPLILLPASSLTGLTQGQLEAVLLHELAHIRRHDHLVNTIQVFVETIFFYHPVTWWVSHRMRIEREECCDEVVVHFTGDRTGYARLLILLEELRGNPPSPAIPLAATGGSLMKRVRRIAAPEASGDPTSAMVTAVFFLGAILCGGWWSAVSVPAQQIDITSTGQTTLTIGESEGVPLAMQSKENERQNERASGMNKQASSLNDPLLFLPDNRHVRSLRFSGDGSELISVSYGPGKETSKYYPRVRTWNLETREMHKEVPLQWQQEWTQYLDTLVLCEDQQQIFGSLGTQLGVWDIATGKILRRFDLPPDLREDVEIQRVLVTPDGSRVACTPQSRGLGSISHDAYIVIWDTANGNVLQKLTAKHANILLSLALSDDGQRVAGWPSDGKVAVWEINAGEEILHLKNENLKDSAPFKENIPGALDQVLGLQFSHDGGTLALTDPVGIKLLDAKTGAVRQSMEAPFRYYDSPTFVFSPEDRLLLRYGVHSKEEREASLWDTETGEKLASLPIDGTAAAFSPDGEWLAIGRSDPKQAIALWKPTSLAKEQQATEDHVYWHDRSTEEWTTGLRIIKRPNLDDPQLVLEYLLRNEADSPRIAALSFTSGKSRYLVDVQRNIKPWPGAEESRSYLVELNVAAGGTLTDPRFRQTFDLTGLEAGTYHFQASSFFFVPTDEPSRRRGIPLHHEFSFAIADHPAKKPEKEILRTDSEKKLPTVQWGDQVGGLRIGLAWSPEGAAIPAIFEHGELITADLFVQNVSDMEIDCSSTLPHSMDGWGFSIHNSEGRHITRNQIFFTGFEPQRTFVATLSPGEVKRLTGSPSQFQEKAEEGLVNATVPQLQFVVAAEPPKTPEARPPYTYGLPSDKYTLSAFILLNRESIPEGILSAETPSIKFQVKAKHPNRPQ
>NZ_CP043547.1|WP_153987326.1|467282_470249_+|glycosyltransferase
MAPNSHPLVSVILISFNQERWILETLESIKSQTLQDFELIYCDDASSDHSAKLATEWLNKQAFATQTILHSENRGLCPTLNEAISVSQGKYIQIIAADDLLEPNKLQLQSELLENLASDVALVCSNFAKIDEFGNIKSRQYFDSQFRLPEAPLEMLLKATQENRTAILTPTVLIKRSVFDKVGMFDETLFHEEYDMWSRVCEHNRIAYLSQVLVKHRISKFSRRQDPVNESKIYRDHFCTLAKFAEKKELQPLIMGLMVKLLKKWMQKADFDSPYINKLIIDNPSWATEFLRSWTQTTFESDKKLLDNETAKLRLEEKIDSLQCLLNSRVDQVLALENHANTLQKSLQQEQKKLAKTLDHLTHSDEQKILTLAELETYQARVAATQAQLDLTLSQLNAFHRSRIWRLMAPLRWGLRKSRRVAKLLRVDHVLRKVYRKLVSTIRILKRVIRSGNIKSLRFDRISKHQGERLEVLPTKEQQQTEASLPSSQRSDQKVIFSPDLSSVQSTLSLPTKQKNVYLPEVSPYDTFDIDRSPEFVQYRIDRNNPLLEGANVLIYVAYCPHGKLSELHQFALEQYANQGFEIVLVINTGRYNHYVEAEETSSSIRIVRENVGYDFGAWSHTLQLVAGLEFAQSISFTNDSILGPIPGHQQKIVDWIELALSDVVFLTENLEFRDHYQSYFFTLKKQALENDALAVIQDRPYREAIEEVIIHDELHLSSAFEEKGFSTTVVFPCPEAYETIVNPTISYWRTLIHRGYPFLKVKLVTSGIIPIDDPKLRDLLGTKLLSILNDHINQRELLECSRVPDVNMPAVPAISNVRRFNRYGAMQAYNPPASLSTPLQIPFEGIKTEVDFKDTQSILAAVHCYYLDEADTILRALSELKLNLKVLLTTNTREKRKALQTLLQKTKLEGEIVLVPNQGRDIASLLIETPRYLKDESILLRLHTKKSTHDTRYSNWASFLRQNLIGSRGSCVHSQITSGTRNRFCLF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP043547_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043547_2

3690063-3692199

Unclear

Consensus_repeat	Method
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	PILER-CR
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CRISPRCasFinder
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CRT

29 spacers

cas2,csb2gr5,cas7,cas8u1,cas3,DinG

The CRISPR arrays of NZ_CP043547_2

>merge|NZ_CP043547|2|3690063-3692199|PILER-CR,CRISPRCasFinder,CRT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCCCGGGCCCATTGAGCATAGAAGCAGCCAGGCGAGTTCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCAGAATGCGCAAAATTTATTGTTGATAGACTGGAAAAGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCAACGCCGCTCGCTCGTAAGGATCACTGGGTAACGGGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTTCACCCGACGAGGAAGAATAGTGCTTTACGACGCACGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCCGTCTCCCTCGATTTCTTTTGTTTCAAGCATGTCTTCTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCCCAAACGGGTCGACCGTGCCTTGCAAGAAAAGCCTGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCGATAGCGAGGGTGTGGCACTCGTCAATACATTGGCCCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCCATGTCGTCATCCGATTCTTCAAGTTTACCAGAACGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCACTGAACAGGTCGGGGAACTCGATATGGTCGGAAGCCAGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTTCAAGGGGCCAATGGGTCTGGCCGTTGGGCTGCCGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTTTACAGGCCCTCACGAACGCTTCTGCCGGACCACCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCGCTATCACAGTCGACCACCACCAGCCCGCTCCGCTCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCATTGCCTGCAAGGAACTTCTCTCGAATGGAGAGATCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTGTATTCGCGATGCCGCACCGTTGCGGCGAGGACTTGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCAACTATATCCGCCATCCCCGCTACAAGGCTGTGTTGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCGAGGTTATAAAAGGGAAGCCAAAAAACGCATGGGATAGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTTGATGGGATCGCTGGGCTAAATCCAGCAGGATTTGAGCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCATCACCACGATTCTCAAGGATGGATACCTAAGCCTCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTCTAGAGTTAAAGTACTCGCCTGACTTCTACACTCTGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCGGATGCCTCGTAAATCACTGGGAGGAAAGAAGGATCGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCGCGGCTTCGGCCGCGGCCCCATTACGATGACGGCCGGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGGCTTCGAACGCATCGAGTACATTTGCCAATTCGGCTAGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGACGTCCTGGTCCGACTATGGCCCCTCCATTTTATACAGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGATGCTGTCGGACGGATGCTCGCCAGACGATGAGCTTGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGAGCAAAAAGAAGTCTTTTTCTGACTGGATTCTCTTGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCCTTGGCTTGCCGTCCAGCATCGGCTTGCCCTGGCGGGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGGTTGGCCCTTCCGCCGTTTCCGCGATGCCGGAAAAAGGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCAAAGATGGAGCCGTCGGCCACGCTCGCCCGTTCTGAGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGCTGATGATCGGCTTGCCCATCAAGAACCCATTCGGGGCGGTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC

>NZ_CP043547|2|2|3690063-3692198|PILER-CR
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CCCGGGCCCATTGAGCATAGAAGCAGCCAGGCGAGTTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CAGAATGCGCAAAATTTATTGTTGATAGACTGGAAAA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CAACGCCGCTCGCTCGTAAGGATCACTGGGTAACGGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTTCACCCGACGAGGAAGAATAGTGCTTTACGACGCAC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CCGTCTCCCTCGATTTCTTTTGTTTCAAGCATGTCTT
CTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CCCAAACGGGTCGACCGTGCCTTGCAAGAAAAGCCT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CGATAGCGAGGGTGTGGCACTCGTCAATACATTGGCCC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CCATGTCGTCATCCGATTCTTCAAGTTTACCAGAAC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CACTGAACAGGTCGGGGAACTCGATATGGTCGGAAGCCA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTTCAAGGGGCCAATGGGTCTGGCCGTTGGGCTGCCG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTTTACAGGCCCTCACGAACGCTTCTGCCGGACCACC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CGCTATCACAGTCGACCACCACCAGCCCGCTCCGCTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CATTGCCTGCAAGGAACTTCTCTCGAATGGAGAGATC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTGTATTCGCGATGCCGCACCGTTGCGGCGAGGACTT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CAACTATATCCGCCATCCCCGCTACAAGGCTGTGTT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CGAGGTTATAAAAGGGAAGCCAAAAAACGCATGGGATA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTTGATGGGATCGCTGGGCTAAATCCAGCAGGATTTGAGC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CATCACCACGATTCTCAAGGATGGATACCTAAGCCTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTCTAGAGTTAAAGTACTCGCCTGACTTCTACACTCT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CGGATGCCTCGTAAATCACTGGGAGGAAAGAAGGATC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CGCGGCTTCGGCCGCGGCCCCATTACGATGACGGCCGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	GCTTCGAACGCATCGAGTACATTTGCCAATTCGGCTAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	ACGTCCTGGTCCGACTATGGCCCCTCCATTTTATACAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	ATGCTGTCGGACGGATGCTCGCCAGACGATGAGCTTG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	AGCAAAAAGAAGTCTTTTTCTGACTGGATTCTCTTG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CCTTGGCTTGCCGTCCAGCATCGGCTTGCCCTGGCGGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	GTTGGCCCTTCCGCCGTTTCCGCGATGCCGGAAAAAGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CAAAGATGGAGCCGTCGGCCACGCTCGCCCGTTCTGAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG	CTGATGATCGGCTTGCCCATCAAGAACCCATTCGGGGCG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAG

>NZ_CP043547|2|2|3690063-3692199|CRISPRCasFinder
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CCGGGCCCATTGAGCATAGAAGCAGCCAGGCGAGTTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AGAATGCGCAAAATTTATTGTTGATAGACTGGAAAA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AACGCCGCTCGCTCGTAAGGATCACTGGGTAACGGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTCACCCGACGAGGAAGAATAGTGCTTTACGACGCAC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CGTCTCCCTCGATTTCTTTTGTTTCAAGCATGTCTT
CTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CCAAACGGGTCGACCGTGCCTTGCAAGAAAAGCCT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GATAGCGAGGGTGTGGCACTCGTCAATACATTGGCCC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CATGTCGTCATCCGATTCTTCAAGTTTACCAGAAC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	ACTGAACAGGTCGGGGAACTCGATATGGTCGGAAGCCA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTCAAGGGGCCAATGGGTCTGGCCGTTGGGCTGCCG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTTACAGGCCCTCACGAACGCTTCTGCCGGACCACC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GCTATCACAGTCGACCACCACCAGCCCGCTCCGCTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	ATTGCCTGCAAGGAACTTCTCTCGAATGGAGAGATC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TGTATTCGCGATGCCGCACCGTTGCGGCGAGGACTT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AACTATATCCGCCATCCCCGCTACAAGGCTGTGTT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GAGGTTATAAAAGGGAAGCCAAAAAACGCATGGGATA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTGATGGGATCGCTGGGCTAAATCCAGCAGGATTTGAGC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	ATCACCACGATTCTCAAGGATGGATACCTAAGCCTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TCTAGAGTTAAAGTACTCGCCTGACTTCTACACTCT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GGATGCCTCGTAAATCACTGGGAGGAAAGAAGGATC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GCGGCTTCGGCCGCGGCCCCATTACGATGACGGCCGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGG	CTTCGAACGCATCGAGTACATTTGCCAATTCGGCTAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGA	CGTCCTGGTCCGACTATGGCCCCTCCATTTTATACAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGA	TGCTGTCGGACGGATGCTCGCCAGACGATGAGCTTG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGA	GCAAAAAGAAGTCTTTTTCTGACTGGATTCTCTTG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CTTGGCTTGCCGTCCAGCATCGGCTTGCCCTGGCGGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGG	TTGGCCCTTCCGCCGTTTCCGCGATGCCGGAAAAAGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AAAGATGGAGCCGTCGGCCACGCTCGCCCGTTCTGAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TGATGATCGGCTTGCCCATCAAGAACCCATTCGGGGCG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC

>NZ_CP043547|2|2|3690063-3692199|CRT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CCGGGCCCATTGAGCATAGAAGCAGCCAGGCGAGTTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AGAATGCGCAAAATTTATTGTTGATAGACTGGAAAA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AACGCCGCTCGCTCGTAAGGATCACTGGGTAACGGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTCACCCGACGAGGAAGAATAGTGCTTTACGACGCAC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CGTCTCCCTCGATTTCTTTTGTTTCAAGCATGTCTT
CTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CCAAACGGGTCGACCGTGCCTTGCAAGAAAAGCCT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GATAGCGAGGGTGTGGCACTCGTCAATACATTGGCCC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CATGTCGTCATCCGATTCTTCAAGTTTACCAGAAC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	ACTGAACAGGTCGGGGAACTCGATATGGTCGGAAGCCA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTCAAGGGGCCAATGGGTCTGGCCGTTGGGCTGCCG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTTACAGGCCCTCACGAACGCTTCTGCCGGACCACC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GCTATCACAGTCGACCACCACCAGCCCGCTCCGCTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	ATTGCCTGCAAGGAACTTCTCTCGAATGGAGAGATC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TGTATTCGCGATGCCGCACCGTTGCGGCGAGGACTT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AACTATATCCGCCATCCCCGCTACAAGGCTGTGTT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GAGGTTATAAAAGGGAAGCCAAAAAACGCATGGGATA
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TTGATGGGATCGCTGGGCTAAATCCAGCAGGATTTGAGC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	ATCACCACGATTCTCAAGGATGGATACCTAAGCCTC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TCTAGAGTTAAAGTACTCGCCTGACTTCTACACTCT
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GGATGCCTCGTAAATCACTGGGAGGAAAGAAGGATC
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	GCGGCTTCGGCCGCGGCCCCATTACGATGACGGCCGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGG	CTTCGAACGCATCGAGTACATTTGCCAATTCGGCTAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGA	CGTCCTGGTCCGACTATGGCCCCTCCATTTTATACAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGA	TGCTGTCGGACGGATGCTCGCCAGACGATGAGCTTG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGA	GCAAAAAGAAGTCTTTTTCTGACTGGATTCTCTTG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	CTTGGCTTGCCGTCCAGCATCGGCTTGCCCTGGCGGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGG	TTGGCCCTTCCGCCGTTTCCGCGATGCCGGAAAAAGG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	AAAGATGGAGCCGTCGGCCACGCTCGCCCGTTCTGAG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC	TGATGATCGGCTTGCCCATCAAGAACCCATTCGGGGCG
GTCTCCGCGGTTAACCCACCGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043547.1\|WP_153989540.1\|3693113_3694148_-\|PIN/TRAM-domain-containing-protein	unknown	unknown	gnl\|CDD\|227292
NZ_CP043547.1\|WP_153989529.1\|3674497_3675109_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274357
NZ_CP043547.1\|WP_153989545.1\|3698549_3700316_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP043547.1\|WP_153989530.1\|3675086_3675509_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153989534.1\|3679603_3682111_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NZ_CP043547.1\|WP_153989542.1\|3695299_3695896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_162010395.1\|3682100_3684458_+\|type-I-U-CRISPR-associated-protein-Csx17	cas8u1	cd09767_cas8u1_CAS-I-U	gnl\|CDD\|274989
NZ_CP043547.1\|WP_153989546.1\|3700482_3702018_+\|xylulokinase	unknown	unknown	gnl\|CDD\|198374
NZ_CP043547.1\|WP_153989538.1\|3689127_3689421_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP043547.1\|WP_153989536.1\|3684486_3685476_+\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09678_cas7_CAS-I-U	gnl\|CDD\|378223
NZ_CP043547.1\|WP_153989537.1\|3685493_3687194_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|320705
NZ_CP043547.1\|WP_153989543.1\|3696642_3697242_+\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
NZ_CP043547.1\|WP_153989548.1\|3703605_3705039_+\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|223587
NZ_CP043547.1\|WP_153989541.1\|3694423_3695284_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153989532.1\|3676422_3677655_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153989533.1\|3677683_3679531_+\|DUF853-family-protein	unknown	unknown	gnl\|CDD\|223510
NZ_CP043547.1\|WP_153989544.1\|3697574_3697907_+\|rhodanese	unknown	unknown	gnl\|CDD\|238786
NZ_CP043547.1\|WP_153989549.1\|3705274_3705691_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP043547.1\|WP_153989531.1\|3675505_3676270_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153989547.1\|3702288_3703161_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043547.1\|WP_153989540.1\|3693113_3694148_-\|PIN/TRAM-domain-containing-protein	gnl\|CDD\|227292	COG4956, COG4956, Integral membrane protein (PIN domain superfamily) [General function prediction only].	1.22036e-77
NZ_CP043547.1\|WP_153989529.1\|3674497_3675109_+\|hypothetical-protein	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	0.000377833
NZ_CP043547.1\|WP_153989545.1\|3698549_3700316_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.71513e-94
NZ_CP043547.1\|WP_153989534.1\|3679603_3682111_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	3.15534e-54
NZ_CP043547.1\|WP_162010395.1\|3682100_3684458_+\|type-I-U-CRISPR-associated-protein-Csx17	gnl\|CDD\|274989	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc. Members of this protein family are found exclusively in CRISPR-associated (cas) type I system gene clusters of the Dpsyc subtype. Markers for that type include a variant form of cas3 (model TIGR02621) and the GSU0054-like protein family (model TIGR02165). This family occurs in less than half of known Dpsyc clusters.	0
NZ_CP043547.1\|WP_153989538.1\|3689127_3689421_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.4558e-17
NZ_CP043547.1\|WP_153989536.1\|3684486_3685476_+\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.06868e-51
NZ_CP043547.1\|WP_153989537.1\|3685493_3687194_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|320705	cd09734, Csb2_I-U, CRISPR/Cas system-associated protein Csb2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains; also known as GSU0054 family.	9.59803e-40
NZ_CP043547.1\|WP_153989543.1\|3696642_3697242_+\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	6.31057e-79
NZ_CP043547.1\|WP_153989548.1\|3703605_3705039_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	3.86874e-158
NZ_CP043547.1\|WP_153989546.1\|3700482_3702018_+\|xylulokinase	gnl\|CDD\|198374	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases. This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. D-xylulose has been used as a source of carbon and energy by a variety of microorganisms. Some uncharacterized sequences are also included in this subgroup. The prototypical member of this CD is Escherichia coli xylulokinase (EcXK), which exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ is required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_CP043547.1\|WP_153989533.1\|3677683_3679531_+\|DUF853-family-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	3.06468e-22
NZ_CP043547.1\|WP_153989544.1\|3697574_3697907_+\|rhodanese	gnl\|CDD\|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	2.93674e-31
NZ_CP043547.1\|WP_153989549.1\|3705274_3705691_-\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	3.69143e-25

>NZ_CP043547.1|WP_153989538.1|3689127_3689421_+|CRISPR-associated-endonuclease-Cas2
MPKIYLVCYDVSDPKRLRKIYRTMKGFGDPLQYSIFRCELSARQRQAMRQMLWEILNFAEDRVMIVDLGPTEGRGNQCLEMWGEPRTEPTTRRAVVV
>NZ_CP043547.1|WP_153989537.1|3685493_3687194_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MLAIEFKFLAGRFHATPWGRQVNEGAVEWPPSPWRLLRALIAVWHLKCPEVPEAEMEAIIKALSSLPHYRLPEALTGHARYYMPAENDKLTKIFDAFVALPDSEPVIAVWPDAELNEDQKKYLSQLLTSLQYLGRAESWVEAKLSNQKDECCNVFPLNSEKEFPEDDPELVRLLAAEDENAYKTWRSDIRKKHLDRKLSSKRERQLAKGKPVDKVKLTPADKRRVDENLPESVFDALHADTSQLRSTGWSAPPASRWVHYLRSREAFAAKPSSISVDKVSKKPTLARYAVCGKVLPRLTDALWVGESARHFLMGCSKKTRQDNNAAPIFSGKAPDGSASESQHTHAHFFPEAVDGARHITHLNVFAPRGFEQSDRLALSRLTKCLGPGGNELQLVLIGIGQPEDFGGINEQAGQSKLMAESKIWRSRTPFIPTRHLRIKRSESKNPELREVATIRELTQVVRLELKRRESLQTFADQVEIKPLLHANECGTDLGGTFTSWLKFRRERKRGKGHRAGASGYGFQLIFPTPVRGPIALGYGCHFGLGQFIADDPESNKRSPSNDDRSS
>NZ_CP043547.1|WP_153989536.1|3684486_3685476_+|type-I-U-CRISPR-associated-protein-Cas7
MSIDLSTLAEAPRVLIEVPLKPVQGTRFQPTGFPDLGAATFKSVQTNGENQAIEVDSLIVESAQSMANRLENVCWNEGAEDLEEPLQGLPYVRSTLPDGTITNSILESHRLNSPYIANSKEFEKIKEEIGFVKDQPFNRRKLAAALLKYDPSSLVHGVFLEKVGGVVRLPRMLSSFIEAHDIKVATSGGVKFDRVQPVSTEKGEEEKVKYGKAKEGFGNVPFHRDEYTGQITAYFNLDLTLLRGYGFNEAANRLLILYSLYKIQKFLQEGLRLRTACDLTTVGDVQVTQPEAFELPSLEKLKEALPESIAAVADQFVTPAVTDLQYQKK
>NZ_CP043547.1|WP_162010395.1|3682100_3684458_+|type-I-U-CRISPR-associated-protein-Csx17
MTDSLHEISLPGCRPLPLASYLKALGVLRVVAGLRDPEGDSRGDRFTMGYWKNDCFTLRSRLSKQDLISRFLEGYRPSTIVDPWNGGSGFYPKDNRDAITAILNGKADRFEAYRTTIRTCMEILRGLKIDSKDDDKKPFLLKECRNRLPDEALGWLDAAFLFVGDKPRFPPLLGTGGNDGRLDFPNNFMQRLCELFDPETGQPHESAESLLREAFYEENTDELYSKGAVGQFDPGGAGGDNSKSGFSSNSLFNPWDYVLMLEGTLVFASAAVRKLGSNSQGALAYPFCVRSSGVGYGSANEEDEKSSRAEMWLPLWEQPATLAEIHVLFAEGRAQVRRRPAKNAVDFARALATYGVDRGIEEFVRYGFHQRNGLAFFAVPLDRYRVQGQPEVNLIQTIDGWLDRYRRNAGSENAPSRAKRAIRRVDRAIMELCQRKGPERVQEVVIALGEAEAVLVHSKGFRENSYLPPLLLPPEWLSAMDEPSKEEIGSDKFREFRLAASLAGIWDKRVGAFREHLEPVEVKYSKPQWKTDDSLKIDWGTGGLLRNLAAVLHQRIVAAIQLGPPEGQDVLLFPGSSSIRASLGDIQAFLDGKVDLTRLEALLKGLVLLDWGKIHLGNKAKEKKQAEEKKQADGKKNVDGKENVDGEKSDNQEEKFVSKRKIKPGPNEPTPTAVYSLLKLTHLDRPLSFSKGASENSIRLTPSISRLVASERINDAMELAVRRLRSSGVPPVSNLPTYLSCDCDRLVASLLFSISSSAAQKLARRLMSTETIEEASQLESAVNES
>NZ_CP043547.1|WP_153989534.1|3679603_3682111_+|CRISPR-associated-helicase-Cas3'
MSDSALSDYQQFFKQATGFEQPFHFQSEFATRETLPTLLDIPTGLGKTATAVLGWLFRRRKHPSEVVRQATPRRLIYCLPMRTLVEQTEDEANRWLRNLGWQEEIKVHVLMGGAEKTNWDECPEADAILIGTQDMMLSRALNRGYGMSRYRWPIHYSLFNNDSLWVMDETQLMGVAVTTTAQLQGLREKLKTVRPTHSVWMSATLDPAELSPFDHPAPSGGWPTLELGEEDRNTPRVQQRLHASKPLQKAEAVYSKEKKKNYAKDVAAEVLKHHKPETLTLVVVNRVERAQEIFQALEKLTAKHETDPKLALIHSRFRPTDRKSQQAVLMSESHPEGGSIVVATQAIEAGVDVSATTMFVELALWPSLVQRFGRCNRKGECGTEGHPAAQVFWIDIDTKDNSSAEWALPYELGDLDTARALLQELPEVGPARLKEVDFEPTPQVHHVIRRKDILELWDTTADLAGNDLDVSRYIRDAEDQDLQVYWRKWENKENPTDKMPPEKLPKPDREELCSVSLNKKNRKFFKEIQNNSYCWDALEKKWQTLKQMPPRPGMTVLLPRSEGGYRLDLGWTGSSKDKLTAKDLWESEAPPNEGMDDDDASKAPLALTRHLQDVAGEVDGIRTGLPDLENVPWESIQTAAWWHDVGKSHLAFQTAAYDGDDSNSSKKLLAKMFHDGKPKYRVKQGDKEISRKGFRHELASALAYLAQHGQADQADFIGFLIASHHGKVRGSIRSLPNETIPADPHRRFARGIWEEDELPEVELGNGQISRPLKLKLTLMQMGESGEGNGQAQPSWTARVLALRDHYGPFKLAFFGTLLRVADWRGSQKGEQSDDR
>NZ_CP043547.1|WP_153989533.1|3677683_3679531_+|DUF853-family-protein
MQDPFAPFNQDSDGPIQAIPADAFHQIDEDCQAAGGEFNLPEEEMGSVGRTMFDSQRSEDGTVTVLLPQESLDDVFNQSLVRIQSRDGRTYLGMVVEGPFAEPDGLRADSPPIVISTVQGGMLLPKYHGRAQVEILGERLENNTIVPPRRRPKPNSPVFPLDAKETAETLGIQGDLRIGLAEGFEELEFCIPAKDKSVLPRHLGILGTTGGGKSTTVSGLVAKAQKEGMGIILIDTEGEYTALHEATDDESMKAACEQLQLSPEGVKNTHLYHLVGRETANPAHPSKTEFSPRFWALSPYMVQEILELNDAQSDRFFDAYSITKRAMEQFKIFPRERNAQDRDRAAAWDELDTGYPMMQLKQLYDVIHQTAAILSKEEGEIPLATLEFAENRSRLVKLIQSSKPGSIASWRALQGKLGKIRRLKIFDAPGVKPLNFAEMLKPGRVSIIDLSDSDSTQINNLVIAELLRGIQAAQDRSYKKAIAEGRQPTPTLIFIEEAHEFLSAARIRKMDTLFQQVARIARRGRKRWLGLAFITQLPQHLPDEVLGLINNWVLHKITDANVIRRLKQSVPGLNESQWNRLQTLAPGQAIVSFTPLTRPLQITVDPTPCRLLMVE
>NZ_CP043547.1|WP_153989532.1|3676422_3677655_+|hypothetical-protein
MMELENPLSEEASSLQRNEDRLVTSDDFEEAHGESLARTLDLSTWHAGVDLIEMYDRLKHEVRDAVDHETALHRKIRDHIFPLLAERQGAPQGAGVYRVTLEQVQAIHRKLLFNGGVEACDGTMSRLDTLPLSISQIGVCLVSYHGDQGSWAHRIYQRDMRCSSPDPLDEAMEMLDIRRERGGVEANGGGDRLSDLARRGVMAYAERAVLLDRSQAIWRMGHGSPTPLELLTGCGMPELALRGLQLMRRLIEGHQKFVFVPSAAAARDFMTIGAALPPLHYAILDDHTYRLERMTSVRFRGEAWTRWATEVEQFAKSIGPQIVVGLFRASRLAPPQMFYAHIDHAHTAAQIALADSVLQEHRGFPLLIDLADTICRSTFSAEMFNASTQAAYCDAGAPYRHFGERRTRPR
>NZ_CP043547.1|WP_153989531.1|3675505_3676270_+|hypothetical-protein
MRKEDLADILDWSERFWLLAGESEPFPRSLESAVSRALPLAIVKLPRLDGDSINEYLRKSGLNLSYLSTPRSLRGCLLARGGVGIVFLDGTDAADEMRFTLAHEVSHFLLDHLHPRQRAIQSLGSGIQDVLDGLREATPQERMNAMFQGVSFERFEHFTDRRTDGTIGRLEILRVEDRADRLALELLAPLKCIQESLASRAATFKDARTQALLATILATEYGLPGKLAAAYARFLIAEHAPSRSFRDWLRGKNI
>NZ_CP043547.1|WP_153989530.1|3675086_3675509_+|hypothetical-protein
MNPPNPNDPHPLLRMMERTRSDPFFIGFYLDLHTRRKGWDEQGLAEHLQCPIDRLPELFLCRCPSYSDPKFADHIRKIAEYVPCNEMKLLLVLREVMAWQKLSGPSAGSANSFLLAARDRRDEAEDAPETEDKAEGDETS
>NZ_CP043547.1|WP_153989529.1|3674497_3675109_+|hypothetical-protein
MGGAKRLQELHQRLLAEDPTAPPEIATLLLTPLCEDLRRKYSSRRYVDFIHHAVEDALINYFQRPEQYNPTKGELQVYLRMSALGDLRNALRKEQRFQEKFQSGVEISQIAGKIEREEDCTLSILRTKELSTEVRNLFPEELDWQMVELIMNKERRTEVFAEILGITHWSQEDQCSEVKRHKDRIKKILRRFGDSIRESTEPE
>NZ_CP043547.1|WP_153989540.1|3693113_3694148_-|PIN/TRAM-domain-containing-protein
MALFLVRCVYLVVAIGLALSLARQFSRDLPPESLGGWVAWTVFGSVLAVALGVLAFDVSVRRKQLDTISAIYFGTIVGSFLSYLLGLGLEPLVGETPQLRDACQLVLSMVLIYLCTSLLLQTRNDFRFIIPYVEFVKETKGLKPYLLDTSVILDGRIEELLRTEIFEQPLLVPQFVLMELQGVADSDDRQRRERGRKALDLLQELSKDDAIDLQIDDRQSKGNPQTSAEEQLVLLAKTLEGKIITNDYSLNQLAQVHGVQVINLNDLSLALKPTYMPGDQVTLRILKPGEESGQGVGYLDDGTMMVVEQAQAYLQKKITAQVTRSLQTKSGRMLFGTLLDKHSS
>NZ_CP043547.1|WP_153989541.1|3694423_3695284_+|hypothetical-protein
MSLLSRIYFVLGAVLSLLGIFVLLQNSDPLSYLPLLLFTWQGQEADVLRIKDAVADLEKALVGLGMWLIGIGLFHTGWWQAISQSGLKLWGRIGIGLAGVGFLLGAVFWWIGNASLQNGFIGLARAQMPTPEMMNLAIHFSKTMTGWALFSCMFAQGILLAGAILGMRPAYLKLAPPQGAFAVSLWVPRLLNGVAAFVGLCLLVVLLIAYWTTLAELQPMTIPLAEDASLPRPTQLASPVLFAIELQWIITGALLAYGMSILATALLTASQPVIDCENAADSQPMK
>NZ_CP043547.1|WP_153989542.1|3695299_3695896_-|hypothetical-protein
MRFSTQIGEKTVAIHCQEDLGPFAEGLLAYLKETFMGHSDQLNDGYKIQFGWTLLKLQQQKGDLVLFEPNYQSDPFTEWRNEISTSLAVAAQQNEILKQTEAEGVPALFQDKIVMAQGSVDEEKIYLYRSKAPSEGDSGWYIAPVEMDEGEEPEYEAMFVFELLQRRPALLKVLLLPPGYMVVFQGDQIEGWRHQPVD
>NZ_CP043547.1|WP_153989543.1|3696642_3697242_+|transcriptional-repressor-LexA
MPNLERLTPRQREIYGFIRDRIRNRGYGPTVREVGTAFDISSPNGVMCHLKALEKKGLISREKNRSRAIQLVEETPQSMGLPLAGRIAAGALQEAIEQQEDIDFGDLFNRPDLFVLEVQGDSMIEDHIADGDYVVIRKQDTAERGEIVVALTDENEATLKRWYPEANRIRLEPANSSMQSIYVSDARVLGIVVGVVRKL
>NZ_CP043547.1|WP_153989544.1|3697574_3697907_+|rhodanese
MSSPIEIDIHSVKLKMDHGDSFLLLDCREPDEYELVQIEGSKLLPMGELPERLHELEEYREQEIVVHCHHGGRSLRVAQWLRSQGFPQVMSMAGGIDQWAVEIDPSLSRY
>NZ_CP043547.1|WP_153989545.1|3698549_3700316_+|protein-kinase
MTKATGEAFLQRLEASRLLTAEQMQLLRKHLPQDQDIDPRKLAAILAQRKLINRWQAEKLLTAKQFSFVLGKYRLLGQVGKGGRGTVYKAEQLGLGRIVALKVLPQELMNKEEAVQRFRREAEVAAALSHPNIIACYDAECDGETHFLVMEYMDGQELNRWIEQFSPLPVSWCCEVMRQASLGLQHAHIKGMVHRDIKPGNILVEASDTESRPVTKLLDMGFARNTADGGNDDIRLTQPWQVFGTPDYMSPEQAERTRDADIRSDIYSLGITFFKLLTGELPFQEGSHLQKLIARARNDAPLVTTIRPEIPEGVAQIVAKMLARLPEERYQTPVEVSVALEPFSMVKPGERLEQAAIAPQATASEHSSVTGPPTEIRSVPESAVSDSMAATETSLDDLHMGAADLQAPHMDDVSELEMGPSPMMPAGVGPPSRSNHIAKESPFAEPNPSTEPDSQIVPPPAPATLGMEASSDEDDRATEIIDGNSTAMIAARSAAPTLSMHRVNPYRLKQAIYKGILSGTLLGFPIGGVIGATVGLAVNSLLGWGLTPIVWLPLALGLGTLFACLLSIYNSVQAAIYLVHPPLPEEEL
>NZ_CP043547.1|WP_153989546.1|3700482_3702018_+|xylulokinase
MSIFLGIDIGTSGTKTIAIDVAGNILASATAEYPLSHPKPLWSEQDPEDWWQATIQTVRQVLSTPEVSADQVQAIGLSGQMHGSVFLDVNDKVIRPALLWNDQRTAAECDEIEQRAGGREKLIEMVANPALTGFTAPKILWLRNHEPENFERLRKVLLPKDEIRRRLTGEYATEVSDASGMLLLDVKNRQWSKPLLSALELDESLFGKVYESEEVTGTLKPEVADLLGLPASCKVVGGAGDCAAGAVGNGIVETGVVCTSLGTSGVFFFHSDTPEVDPQGRLHTFCHAVHGKWHMMGVNLAAGGSLQWFRNALCAHLKEVAAQEGKDPYELMIEEAKQAPAGSDGLLFLPYLAGERTPHADPMARGAFVGLTMSHSRGALTRSIMEGVTYALRDSLTIVEELGVEVSEIRATGGGARSPFWRQMQADILGHSVVPTTSEGGGAAYGVALLAAVGAGAYQDITEACRATIKTGPACTPNSEAKAYYDRAFPIYQSLYPALKQSYQEIGGLTE
>NZ_CP043547.1|WP_153989547.1|3702288_3703161_-|hypothetical-protein
MLVWRKFFLCFSFLLFAQSVQAIDSFDRHDEHMLKQRIETIEAVPSMTSGQSASLQPLGPEIHSPCLVVKTNSGNLAKILVSWGFRKDAAGKPIPVLMIDRFITYDREVANRTVANGKNIMLFPDFTFNLDLGQVVPNGQGADLTFTSDRKLASIQQAKIFPIDGPAEDDQEYRNVFHENRGIQEGVEPEDFTGIWRVNGDGRWKGSWEIIAQPNGRISGKYYADETESIFPITGKVSGSPHHISLEIELTVATQQIEAYLLTKDKDKMAGTISILGQTFGIYAERESRE
>NZ_CP043547.1|WP_153989548.1|3703605_3705039_+|DEAD/DEAH-box-helicase
MEFSLTQSTLEETCLFEDLPLSKITLKALKKAGYQQATPIQAAVIPEVLSDQDVVGQAQTGTGKTAAFLLPILERFANNEEKTKDPKALVLVPTRELADQVMQEAIKLSTGKSFRIAVLCGGRPIGRQIRQLQSGVELVVGTPGRVMDHLRRGTLQCRHLGMVVLDEADRMLDIGFRPDIETILKKCPQSRQTVLLSATVPPEVERLAHNYMRDPVMCQVSTQKEVSADTIDQYYVSVQPNRKFDLLVHLLNEEQPEQAIVFCHTKRDTDRIAKELKSKVSKVAGMHGDLPQRARDRILKKFRTGQVRCLVATDVIGRGIDISGISHVINYSIPEFCDDYVHRVGRTGRMGKSGTAYTFVSRDQGHLLTQIEKRINKLLEPAQFDGFETNPDSVDRSPRKKSRRPRRTRAHDSGSTSPRKKNRPPRSSRSGGSGKPSTSPNPRSESSKSEGSPSNNGNFSPSNGKPKRSKRKYRRAL
>NZ_CP043547.1|WP_153989549.1|3705274_3705691_-|biopolymer-transporter-ExbD
MAVKLPKSTALESLSITPLIDVVFLLLIFFLVATRFEEEERELSVVLPQASEARPLTETPEELIVNINKQGEFIVGGEVRSSEELFADLKQAWANNPGQQTVLIRADESSPLRYAAEVMNLCNRANILDYRLATHFEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP043547_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043547_3

5580627-5582960

Unclear

Consensus_repeat	Method
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	PILER-CR
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CRISPRCasFinder
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CRT

32 spacers

RT,cas2,cas1,cas7,cas8b3,cas3,cas6,WYL

The CRISPR arrays of NZ_CP043547_3

>merge|NZ_CP043547|3|5580627-5582960|PILER-CR,CRISPRCasFinder,CRT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGCGGTGGAATGATCGCCAGTGTTTGGCAGTAGAACGGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACACCGGCATTCGTCCACAAATCGAAATGGGCAAGCAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGCTGTGGAGGTGGAATCTCAAGGCCCCTGACAGAAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTTCGCCGTTTCGCGGGACGATCACCCCGTTGACTTTGGTAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACATTGCTTCCGTGAGGGTTTCTTTCTGAAACTTTAGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGAAGAGTATCACAAAATCGCGGCTCCGATCGCGGAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTGCTCGAGGGGTTGAAATCGCTCGCGACCAAAACAAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACCAAATTCACGATTCACCAAGGCTTCAATGCCATCGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTCGTGATCCGACACCCCGTCTAGAGGGATCCGGAGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTCGGAAAACCCCAAAACTCGTGAAAAAAAATAGCGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACCTTGGCTTTCGTGAGGTCGACGCCCCAAGCATCTTGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGAAGTCTTTCTTTGGTTCGATCAAGGATGGTATCACGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACAGATTAGGGAAGTCGTAACCCGCGTCGCGAATGAGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGCGTATATTCTTTCACGTCGTTGATAAATCCAGGGAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGCCCCGGCTCAAACGGTTCGGCATTGCTTGAGAAAAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACAGCAACCGGCAGAGTTCTCTGGCTTCTTCGTCAGACGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACACTCAACCAGTTGTTTCCCGTATATCCGGAGAGGGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACAATGATGCGGGAGATAAAGAGGGCCTGGAGTACGCAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTGCACTGGAGGCACTGGAAAGAGAGGGCAAAGCAATGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACGAGGGTCGTTACTGATCGACGAACTGAGGCTTAGAGGCGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACCTCGGGGCCATCCTGCGAGAGGCGACCAGTGAGAGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACAGATGCCGCAGGGATCGAGGCGACCAAATTACAAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACACAAGTGTTTGATTTCGAAGACCAACTCGTTCGAATGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTTGTTGGCCTCGTAATAACCCATCTGCTTGTTGAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTAAATTTGCGAACAGAATGCGGTTTTCCGCCTTCGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACACTCCTTGATAGTGAGGACGCAAACAAGGGTGTTGGTGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTCGCAATCGCCTCGAAGCTTCTTCAAAATCTCCTCTGGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACTCATTCTCTTTTTGTTTTCGAAGTTCCTGATTTTTGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACACCCTTGTTGCGTGATTCCGACAGGTGGCGGGAAAACGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACACTTCCTCAGCCCGTTTTTTTGAGTTGGAAATAATGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACAATGAACATTTCAGAAATTGGGAGGGAGCTAAAAAGTGCTCAACGCCTGACGGCGTCATTGAATGAATCACATTTCGTCGATTTTCGTTTGGTTGAGAGTCATCATTTGTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC

>NZ_CP043547|3|3|5580627-5582960|PILER-CR
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCGGTGGAATGATCGCCAGTGTTTGGCAGTAGAACGG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACCGGCATTCGTCCACAAATCGAAATGGGCAAGCA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCTGTGGAGGTGGAATCTCAAGGCCCCTGACAGAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TTCGCCGTTTCGCGGGACGATCACCCCGTTGACTTTGGTA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ATTGCTTCCGTGAGGGTTTCTTTCTGAAACTTTAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAAGAGTATCACAAAATCGCGGCTCCGATCGCGGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TGCTCGAGGGGTTGAAATCGCTCGCGACCAAAACAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CAAATTCACGATTCACCAAGGCTTCAATGCCATC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGTGATCCGACACCCCGTCTAGAGGGATCCGGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGGAAAACCCCAAAACTCGTGAAAAAAAATAGCG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CTTGGCTTTCGTGAGGTCGACGCCCCAAGCATCTTG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAAGTCTTTCTTTGGTTCGATCAAGGATGGTATCAC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGATTAGGGAAGTCGTAACCCGCGTCGCGAATGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCGTATATTCTTTCACGTCGTTGATAAATCCAGGGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCCCCGGCTCAAACGGTTCGGCATTGCTTGAGAAAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGCAACCGGCAGAGTTCTCTGGCTTCTTCGTCAGACG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTCAACCAGTTGTTTCCCGTATATCCGGAGAGGG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AATGATGCGGGAGATAAAGAGGGCCTGGAGTACGCA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TGCACTGGAGGCACTGGAAAGAGAGGGCAAAGCAAT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAGGGTCGTTACTGATCGACGAACTGAGGCTTAGAGGC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CTCGGGGCCATCCTGCGAGAGGCGACCAGTGAGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGATGCCGCAGGGATCGAGGCGACCAAATTACAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACAAGTGTTTGATTTCGAAGACCAACTCGTTCGAATG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TTGTTGGCCTCGTAATAACCCATCTGCTTGTTGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TAAATTTGCGAACAGAATGCGGTTTTCCGCCTTCG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTCCTTGATAGTGAGGACGCAAACAAGGGTGTTGGT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGCAATCGCCTCGAAGCTTCTTCAAAATCTCCTCTG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCATTCTCTTTTTGTTTTCGAAGTTCCTGATTTTT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACCCTTGTTGCGTGATTCCGACAGGTGGCGGGAAAAC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTTCCTCAGCCCGTTTTTTTGAGTTGGAAATAAT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AATGAACATTTCAGAAATTGGGAGGGAGCTAAAAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ATTTCGTCGATTTTCGTTTGGTTGAGAGTCATCATTT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC

>NZ_CP043547|3|3|5580627-5582960|CRISPRCasFinder
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCGGTGGAATGATCGCCAGTGTTTGGCAGTAGAACGG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACCGGCATTCGTCCACAAATCGAAATGGGCAAGCA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCTGTGGAGGTGGAATCTCAAGGCCCCTGACAGAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TTCGCCGTTTCGCGGGACGATCACCCCGTTGACTTTGGTA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ATTGCTTCCGTGAGGGTTTCTTTCTGAAACTTTAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAAGAGTATCACAAAATCGCGGCTCCGATCGCGGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TGCTCGAGGGGTTGAAATCGCTCGCGACCAAAACAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CAAATTCACGATTCACCAAGGCTTCAATGCCATC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGTGATCCGACACCCCGTCTAGAGGGATCCGGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGGAAAACCCCAAAACTCGTGAAAAAAAATAGCG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CTTGGCTTTCGTGAGGTCGACGCCCCAAGCATCTTG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAAGTCTTTCTTTGGTTCGATCAAGGATGGTATCAC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGATTAGGGAAGTCGTAACCCGCGTCGCGAATGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCGTATATTCTTTCACGTCGTTGATAAATCCAGGGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCCCCGGCTCAAACGGTTCGGCATTGCTTGAGAAAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGCAACCGGCAGAGTTCTCTGGCTTCTTCGTCAGACG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTCAACCAGTTGTTTCCCGTATATCCGGAGAGGG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AATGATGCGGGAGATAAAGAGGGCCTGGAGTACGCA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TGCACTGGAGGCACTGGAAAGAGAGGGCAAAGCAAT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAGGGTCGTTACTGATCGACGAACTGAGGCTTAGAGGC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CTCGGGGCCATCCTGCGAGAGGCGACCAGTGAGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGATGCCGCAGGGATCGAGGCGACCAAATTACAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACAAGTGTTTGATTTCGAAGACCAACTCGTTCGAATG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TTGTTGGCCTCGTAATAACCCATCTGCTTGTTGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TAAATTTGCGAACAGAATGCGGTTTTCCGCCTTCG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTCCTTGATAGTGAGGACGCAAACAAGGGTGTTGGT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGCAATCGCCTCGAAGCTTCTTCAAAATCTCCTCTG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCATTCTCTTTTTGTTTTCGAAGTTCCTGATTTTT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACCCTTGTTGCGTGATTCCGACAGGTGGCGGGAAAAC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTTCCTCAGCCCGTTTTTTTGAGTTGGAAATAAT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AATGAACATTTCAGAAATTGGGAGGGAGCTAAAAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ATTTCGTCGATTTTCGTTTGGTTGAGAGTCATCATTT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC

>NZ_CP043547|3|3|5580627-5582960|CRT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCGGTGGAATGATCGCCAGTGTTTGGCAGTAGAACGG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACCGGCATTCGTCCACAAATCGAAATGGGCAAGCA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCTGTGGAGGTGGAATCTCAAGGCCCCTGACAGAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TTCGCCGTTTCGCGGGACGATCACCCCGTTGACTTTGGTA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ATTGCTTCCGTGAGGGTTTCTTTCTGAAACTTTAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAAGAGTATCACAAAATCGCGGCTCCGATCGCGGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TGCTCGAGGGGTTGAAATCGCTCGCGACCAAAACAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CAAATTCACGATTCACCAAGGCTTCAATGCCATC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGTGATCCGACACCCCGTCTAGAGGGATCCGGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGGAAAACCCCAAAACTCGTGAAAAAAAATAGCG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CTTGGCTTTCGTGAGGTCGACGCCCCAAGCATCTTG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAAGTCTTTCTTTGGTTCGATCAAGGATGGTATCAC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGATTAGGGAAGTCGTAACCCGCGTCGCGAATGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCGTATATTCTTTCACGTCGTTGATAAATCCAGGGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GCCCCGGCTCAAACGGTTCGGCATTGCTTGAGAAAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGCAACCGGCAGAGTTCTCTGGCTTCTTCGTCAGACG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTCAACCAGTTGTTTCCCGTATATCCGGAGAGGG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AATGATGCGGGAGATAAAGAGGGCCTGGAGTACGCA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TGCACTGGAGGCACTGGAAAGAGAGGGCAAAGCAAT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	GAGGGTCGTTACTGATCGACGAACTGAGGCTTAGAGGC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	CTCGGGGCCATCCTGCGAGAGGCGACCAGTGAGAG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AGATGCCGCAGGGATCGAGGCGACCAAATTACAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACAAGTGTTTGATTTCGAAGACCAACTCGTTCGAATG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TTGTTGGCCTCGTAATAACCCATCTGCTTGTTGA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TAAATTTGCGAACAGAATGCGGTTTTCCGCCTTCG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTCCTTGATAGTGAGGACGCAAACAAGGGTGTTGGT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCGCAATCGCCTCGAAGCTTCTTCAAAATCTCCTCTG
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	TCATTCTCTTTTTGTTTTCGAAGTTCCTGATTTTT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACCCTTGTTGCGTGATTCCGACAGGTGGCGGGAAAAC
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ACTTCCTCAGCCCGTTTTTTTGAGTTGGAAATAAT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	AATGAACATTTCAGAAATTGGGAGGGAGCTAAAAA
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC	ATTTCGTCGATTTTCGTTTGGTTGAGAGTCATCATTT
GTGCTCAACGCCTGACGGCGTCATTGAATGAATCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043547.1\|WP_153990759.1\|5567383_5567602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_162010504.1\|5591699_5592119_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP043547.1\|WP_153990771.1\|5588666_5591063_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP043547.1\|WP_153990774.1\|5592450_5593452_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP043547.1\|WP_153991692.1\|5583243_5583540_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP043547.1\|WP_153990767.1\|5583559_5585263_-\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_CP043547.1\|WP_153990775.1\|5594016_5595987_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|238206
NZ_CP043547.1\|WP_153990761.1\|5567954_5569280_-\|FG-GAP-repeat-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153990769.1\|5585970_5586927_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP043547.1\|WP_153990763.1\|5571363_5574330_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275327
NZ_CP043547.1\|WP_153990764.1\|5574872_5576009_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153990768.1\|5585238_5585967_-\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	unknown	unknown	gnl\|CDD\|187819
NZ_CP043547.1\|WP_153987440.1\|5576215_5576896_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153990762.1\|5569276_5571331_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP043547.1\|WP_153987285.1\|5574347_5574530_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153990770.1\|5586978_5588697_-\|type-I-MYXAN-CRISPR-associated-protein-Cmx8	cas8b3	mkCas0177_cas8b3_CAS-I-B	gnl\|CDD\|275206
NZ_CP043547.1\|WP_153990772.1\|5591059_5591683_-\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|370559
NZ_CP043547.1\|WP_153990765.1\|5577684_5578374_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_162010503.1\|5579083_5580214_+\|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP043547.1\|WP_153990760.1\|5567662_5567836_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043547.1\|WP_162010504.1\|5591699_5592119_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.7662e-08
NZ_CP043547.1\|WP_153990774.1\|5592450_5593452_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	2.22931e-41
NZ_CP043547.1\|WP_153991692.1\|5583243_5583540_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.64356e-25
NZ_CP043547.1\|WP_153990775.1\|5594016_5595987_+\|recombinase-family-protein	gnl\|CDD\|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	1.97157e-14
NZ_CP043547.1\|WP_153990767.1\|5583559_5585263_-\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	2.82108e-152
NZ_CP043547.1\|WP_153990769.1\|5585970_5586927_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	3.80285e-15
NZ_CP043547.1\|WP_153990763.1\|5571363_5574330_-\|hypothetical-protein	gnl\|CDD\|275327	TIGR04534, hypothetical_protein, ELWxxDGT repeat. This model describes protein repeat with a well-conserved motif ELWxxDGT, and a periodicity of about 48. A single protein may have as many as 18 repeats. It may consist nearly entirely of this repeat, or may have other repeats as well (e.g. hyalin repeat). It is most common in the Deltaproteobacteria.	4.88896e-17
NZ_CP043547.1\|WP_162010503.1\|5579083_5580214_+\|hypothetical-protein	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.97563e-19
NZ_CP043547.1\|WP_153990768.1\|5585238_5585967_-\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	gnl\|CDD\|187819	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	0.00031803
NZ_CP043547.1\|WP_153990762.1\|5569276_5571331_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	6.67191e-12
NZ_CP043547.1\|WP_153990770.1\|5586978_5588697_-\|type-I-MYXAN-CRISPR-associated-protein-Cmx8	gnl\|CDD\|275206	TIGR04413, hypothetical_protein_LEP1GSC082_4029, CRISPR type MYXAN-associated protein Cmx8. Members of this family occur only in CRISPR/cas loci of the MYXAN type, but are present in a minority of such systems. This protein appears to replace the MYXAN system Cas8a1/Csx13 protein (TIGR03485/TIGR03486), compared to which it shows similar length and composition but only about 12 percent sequence identity.	3.99314e-159
NZ_CP043547.1\|WP_153990772.1\|5591059_5591683_-\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|370559	pfam09559, Cas6, Cas6 Crispr. The Cas6 Crispr family of proteins averaging 140 residues are characterized by having a GhGxxxxxGhG motif, where h indicates a hydrophobic residue, at the C-terminus. The CRISPR-Cas system is possibly a mechanism of defense against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	3.44334e-67
NZ_CP043547.1\|WP_153990771.1\|5588666_5591063_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	2.32754e-48

>NZ_CP043547.1|WP_162010503.1|5579083_5580214_+|hypothetical-protein
MESLDSFELERFAAADNLHVAYQTLEREGGDAPGIDGLRFENLSPGEVFGILRATSKCLLRQTYRPQETRLVQIPKGDGRYRELRLQCLADRTVAKALQLTLKPYWQTRLPRLGQDVWQIFAQMQRVMRERGAYILAIDDIRDCFPSARIEDVLACHREQMTQPDLLWLVERLVRGYEGPDRTTGLDQGSPFSPLAMELLLHHRLDLPLETRSQGYPLPLRYVDNLTFVCSSEREGHETLQTTGSILSGIGLTLKGQDGEPQDIRDPQFNTAVLGFIPQWQNGQLTFGIPESAYEDLGQGLFHTINHPQTAKVANRVVEGWIEAKGPAFTNRAAPEVIDRILHIGREYGYRCFCKKGLRRTASKARKRWIEFSQPS
>NZ_CP043547.1|WP_153990765.1|5577684_5578374_-|hypothetical-protein
MICYRVWGTVNNQRLPSFGFLQALVEHTGVDANWLLIGKGEPFPLLENSNDELVPMASSLLPGPPEEHFDLIEKRAALCKPRRAGSVYLVNARLVVPPEWVQWIQVEPGDSLIIESDKQIWQKSPLYLHNKICVYRSPSEEGYYLGLRVLKVEDAGIKPKLTIKSVAESTRDFQRQSSTSDGSKTPRMLRLPDLPERSKPLPASTPGEEIVEIGEIVGVILALYREVKT
>NZ_CP043547.1|WP_153987440.1|5576215_5576896_+|hypothetical-protein
MNTLTCTAETSTRSALQNSTPCWHPEFLAMLPKIENHARIAFRYLQGDDREEAIQEVLCHCCSAFARLVERGKAGSAIWSTLAKYAVAQFRTGRRVGTSLNVRDVSSPHCQQRKGVRLRSLAVEEEREGSCWREMLVEDKKAPPSEIAASRLDFSAWLKSLSRRIRRIAVQLSLGRTTEEVARRFRLSKGRISQIRRELERSWKAFQGELGGEVSAYPAKSAVAPA
>NZ_CP043547.1|WP_153990764.1|5574872_5576009_+|hypothetical-protein
MTQQRMDSVGRYLERVPDVGGSGISEGAEDDGDVTEKAWGLLLDQVRRGREEVLPMITSLVAGRDCLEFRVEEIEAILKGAERLLDEARHWVEVLARASFLPVNSDARERLACGNPEFEFEPFGMSARQVVQGLELVCRRWKEARESSLLSDGENTAGPSAAVAAQVLVEITRLSQGLKVFQAVLEFRSPHPNIDYREADPWGVGKENATHFKAWGLSLLPPVKIATQKRPDADALVATWLIQRTSSFSTPCLVEFVSRSLSPRKFENYHALIEVGKVFDPRRKHFDSNHRLTFSPDEECATSLVGRHVSASSPEIKKLIELIRAGDRIAGRQTSSAYQQSASNGLHALIACARTYSQGDQMLYQSLAAYLDARYSSI
>NZ_CP043547.1|WP_153987285.1|5574347_5574530_-|hypothetical-protein
MAWLSFFSHRNERQQQTRLRQQKETPLQLESLEQRCLLASDPFLIDINQVGNPLVLPPGI
>NZ_CP043547.1|WP_153990763.1|5571363_5574330_-|hypothetical-protein
MFFIARERFTGYELWISNGTDAGTQLVKNIRPDSVSSLPRYLTNVNGTLFFQAHDGSIGLELWRSNGTEGSTQLVKDIWSGFNWGIPRYLTNVNGTLFFRARESSTGYELWMSNGTEAGTQLVKDIRAGSNGASPRYLTNVDGTLFFSANDGSTGYEIWRSDGTSAGTQLVKEIFDGAISSYPKYLTNVNGTLFFRAFENSTSYELWTSNGTEAGTQLVKDIQFGSSSTPKYLTNANGTLFFQANDGIHGAEVWVLEDTEVPTLGITPDGGATNESPITFTFQFSEFVFNFDTSDVMVTGGAKGTFTAIDRDTFTLVITPSGDGLVTVSVADDVAEDASGNLLLGDSATIEYDGTTPTLMITPDSGITNNFPITFTFEFSEDIIDFIESDISITGGLGSNFTMVDGDTYTIDVTPSADGNVTVSVANDLAEDDAGNLLVGDSVTIEYDGTAPTLMITPDGTLTNSEILLFTFEFSEDVTGFTTEDIVVTNGTKGFFSTTDGNTYTLSVTPTADGDVTVTVASAVAQDAAGNENIGDIATVEYDGTAPTVSVSPENELTNLATTVFTFEFSEEVFGFTADDVMVTNGTKGTFTEVDGDTYTLEVTAMADGDVIVNALADGAMDAAGNGNQIGSATVTYDGTAPTLDITPDGIATNDNPITFTFQFSEDVVGFTIDDLAVVGGSKGTLMMIDGNTYTMDVTPSGEGNLIVAVEDGFAADAAGNLLVGDGVIVEYDSIAPTLTITPDGLVTNLNSTIFTFQFSEVVTGFTIDDVFLSNGTKGTFIPVDGDTYELEVFSPCSSGDLIIAVLDDAAQDAAGNGNIGDSAAITYDNVAPTLEITPDGSANNQGSTLFTFQFSEAVTGFTIDDVDLMSNGPNLSTGMLNAVDEDTYTLEVFHSNGNGDVIVSVSADEAFDAAGNGNTGDSATITFDDIAPTLMITPENLSTNANPITFTFQFSEEIFEFIESDINISGGSGSNFTMVDGILIRSM
>NZ_CP043547.1|WP_153990762.1|5569276_5571331_-|IS4-family-transposase
MSNGAAEDAAGNLLVGDLVTVGYDETAPTLEITPDSGVTNDDPITFTFEFSEEIFEFIEGDISITGGVGSNFTMADGDTYTIDVTPAGDGDITVSVANEAAEDSAGNLLVGDMVTIEYDGTAPTLEITPDGGESNDDPIVFTFFFSEDVIGFDAGDIMVTGGTAGTFTTLDDYLYTQPFVAVIAGSLEGLLGVAKSVLLVIGALLLSVESAISPAFPPPGGHVMILSEVFDLFVKQSPVTVMVRATMENVLSAERLDQLFAETAVRQRPSALAFSLVADLMGTVVCGVRPSMHAAFQANSEAIAVTIKPLYDKLRGIEPGVTRTLVRETATRLAEIVDHTEGTLPPWLPGYRVKILDGNHLRRTDRRLKELRSRNAAPLPGHSLVLLDPERMLAIDVFPCEDGHAQERRLLPQVLPTVERGDCLVADRNFCTMDFLAGIADRGGSFIIRQHKQALRGELQGERREAGKIETGSVFEQPLRLLPREKEPWPVRRISVLLDEPTRDGDTELHVLTNLPESIDACRIAEIYRRRWTIETAFQELEATLEGELQTLCYPRAALFAFAMALTAYNVLSTVKAALRGEHGAEKINHEVSGYYLADEVAGTWRGMMIVLPGEFWTEQFADRTPRQMAELLREAAQQIRLPAFRKHPRGPKKKPPSKMNKKHRRHVSTARILEERTSEPTKK
>NZ_CP043547.1|WP_153990761.1|5567954_5569280_-|FG-GAP-repeat-protein
MTATKGCLYTLEVTPDAEDTDVTVTVADGVAQDAAMNDNVGDSATITYNAIDETPLIVTATDAVSDPEDFSKVRVFDLAGNELYNFAPYSEAYQGAIRIATGDINGDGILDIVTAAGPGGGPHVKVYDSQTGELITGPVTEFYAYHPAFTGGVFVAVGDVNDDGYDDIITGADAGGGPHVKVFSGEDCTVLTEFYAYDPSFAGGVRVAAGDVNGDGTAEVITAPGAGEEPRIKVFNGDSSTGNTIMGAATNFLAYTSNITTGLFVASGDVNDDGLDDIIVAPDAGGGPHVKVFSSDDASLLQNFYAYNAAFVGGVRIGSADINQDGFADILTVPGTTGGPHTRAFSGVDLSDIANFYSGPSDIFDGLFIGGGISLLPIEYPAPMSAPLSSPTITTNTEPPEDLPFDNQAKKKSWQDDADEFFQSAEKIDKLFSGLGIDKTA
>NZ_CP043547.1|WP_153990760.1|5567662_5567836_+|hypothetical-protein
MAYTARDKLNFIYLSSSLILAGLFSALSGSWLMFLIIAAAMITALVYTSDIRLPRRR
>NZ_CP043547.1|WP_153990759.1|5567383_5567602_+|hypothetical-protein
MTQRELDHAIATQTGESLCEIRRLGFSIADPFDHDFDPEPDNLPPQVIDWDDVEVDRAMDPLKRSLGRRLAA
>NZ_CP043547.1|WP_153991692.1|5583243_5583540_-|CRISPR-associated-endonuclease-Cas2
MAEKHWHLITYDVRDPKRLRKVARALEGYGTRIQYSVFRCRLDPRAMEKLHWELNKLMEAEDDLLVIPLCPGCAAKVPTHSSGDQSDWGQPPPTFQIL
>NZ_CP043547.1|WP_153990767.1|5583559_5585263_-|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1
MDPSASELRTTASKTESHPSEDEPLVRVMALHALSYCERLFYLEEVEEIRVADAAVYAGRRLHDDLLTQDDDTPELRSFELASNQWGIFGKLDAFRRRDSAWVVYEHKRGRCRRGPKKEPLAWPSDRLQAIAYAVLLEEELGQPVPQARVRYHADRVTAFIEVDDEAKEELRQAIHRARSLRRSTERPPVHENEKVCGRCSLNVVCLPEEERLEEGKADSAPTFFPSNREGQTLHVVSPRSQVSRSGDTLVVRLEDGQKQKVPARMLDSVILHGHAQITTQAIHLCAYHGIGVQWLTAGGKYAASTTASFGRVQQRLRQYSALSSESLCLQLARRLVQGKIESQLRYLMRGTRGDTEARTSCQVGIDQIRESLGKLDRASSPDTLRGLEGISAKAYFAALPYLLGGQVNEALHFSGRTRRPPKDRFNCLLGYGYSLLQSAVQRSILAVGLEPSLGFYHRPRSAAQPLVLDLMELFRVPLWDMPLMGSLNRGQWHPDTDFDIRPRHVWLSETGRKKALTLFEQRLEESHQHPHTGQSLSYARMIELEVRLLEKEWTGSPGHFACLRMR
>NZ_CP043547.1|WP_153990768.1|5585238_5585967_-|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS
MLILELKAPFAACRPMAAGWYRPTATMLTHSAAYGLLLNVACVETRLREEEKSHPGRIPSSLTRPDLPQVRLAIGIPEASPAPQVQTIFQQLHNYPVGKDAGVPAEWTKGSKNNISPVRREFLSNLHVVVCMDGNDELETRIRQGLAGAFNDQRYGLPFVGDNAFLIDRLAERDPSKIPGCRWYQLVKENSDSEQVPTTTRLTTWIDRQDMTKTKSDLFAPTSEISSTIPKEAWQWIPPQVN
>NZ_CP043547.1|WP_153990769.1|5585970_5586927_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MNLFGTVLTYPAPSANYRGESELNRTVIQKVTDGRFDYPIISPEAMRNALREVLTGYGLPTNRERLEPKTGEGEKQQLMVRFSEYPNPQEFADDFFFGYLLAVKGKQLEQLRKERGKDFPLKRDSVLRMNLAKALEPYRYSTVFTQSPKLASDNPWQAGDKQGGTESALLHRETVVTAFQYPFALNLNDCGKAPHDWTRKLLQAIGELNGVSGNHARSYFEFAPASIVIRLTDSLVAGYETYGFKPKKEKSGEYEFPELIEGLLIDPPDYPPQEFYLGGRIVKEMDESLQTALTERGVTLDRNPQRLISLVSQKALGE
>NZ_CP043547.1|WP_153990770.1|5586978_5588697_-|type-I-MYXAN-CRISPR-associated-protein-Cmx8
MSKASALDCITLSYRLSELPTAQHKAGLAGLVLQVQHMQKQEIPEEEVPELHDVTTDSVSITLTEKSCQRLFDELYTAKIVETKVKSKWPGAKPLREEVEEKDDPKTGKKKKSKLFVYNVVNPINPFLTTYLDNELWQKLWRDMLFQIPRAKPTTRRPFNERANDEPCSEGGKFWKEMIKWEKQLKKGKFRTISVSSALLLGAQDINAEQVPFEDRVDQILLLHFWPLTSLIYVPWLLDVNYSDPKRSDDQPVGYSLAIPEICDLEMFCEEFPDLLQNLGDQKEMKKFRPKAACIELPAQSALEFLSNLAALVNKKLGYEHGIIRGLFNAVEYQHLLKLGNNVKSLGSGRITPNRNLLIKYQQIQETYKNPVFRASLLKALLDPAEPQWYAYFAELFEQFPHEFFIRIGNQTPPLMRNFPADVNRKFKALKSNLPNPSKEKTTMTKEPNSEDHLALIVLRMVRDYVRLKAEDRCGIPWDSFKDKKIQDEKTKKVWIDVPKPFKEEQEHVAEKTFLEVRSRHGDEFADYFAFCFGSVKQRINKDEDFLAITQAILTKPDQVRILTLLALSANS
>NZ_CP043547.1|WP_153990771.1|5588666_5591063_-|CRISPR-associated-helicase-Cas3'
MSSLLAKSPRKGAKPKTLLAHTQDVLEAARALFGTETEPTRLGRRWLAFFRVQDERAFYHTLTAAVVLHDLGKANEDFQKAVQGSQDGQLLRHEHFSGVLMNYGPMRKWLEQKGDLDWELVLSAVLGHHLKFDPMCWKYFKSDQNHVVFCSNHPDLQPFLSFIGNEIGLCGLPKELPQLWNILESSSEGQMILPDEMIKLENRLVKYRRLLKKDLEQSRLLWAVRAALIVADAAGSGLPREGKKVTDWIIQTFAETDGLCTKVSVNQKIIEPRIAQLESRLKAKNIEFAWSEFQDQTAELPSRALLLAPCGSGKTLAAWRWIAQQANEGVRHCLFLYPTRATATEGFRDYVSWAPETEAAMLHGSAEYELEGLFENPEDTRHPNRYETEKRLFALGYWSKHYFSATVDQFLAFLQYSYSSVCLLPVLADAVVVVDEVHSFDESMFQGLTDFLKKFDVPVLCMTATLPEARQRRLKELGLDIFDVYQENFPDMKAVRDAPRYKIKQVLREDVDQLVKQKLAERKKVLWVVNTVARAQQVAREFAEDGLATAGLRTSDGVPLYCYHSRYRLCDRKERHQEVITAFQSNEQHAVLAVTTQVCEMGLDLDADVLITEVAPTTSLIQRMGRCNRAGQPRESAGEVYVYTPDSEKPYEEKDLTGVSHFLEEIATGEFVRQSDLETALRNCPQPTEKMKQECQFLGSGPFAASGVEVFRDIEAFTLPSILDSDLAYVQRLCDSKQPIDGYVVPVAQRLRIPAPSRLPNYLAVAPSTHYLPHLGFCDEPISGGTDPPCPKQAPLIV
>NZ_CP043547.1|WP_153990772.1|5591059_5591683_-|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MNYLDLNFALGADGPLPADHGYLLYSALSRVLPELHRESEMGVHPISGKSAGPRKLELLPHSRLRFRVPDGRVSEVLEVTGKTLQVGETMLAVGPPSIERLSPLPALRSRLVTIKIKDAPTANEISPELFTQAVRRQLEGLNVSEQVQITIGKRRTLRIRRRVVVGYELVLEGLTAEESLVIQESGLGGRRHMGCGIFVPLKPRSLS
>NZ_CP043547.1|WP_162010504.1|5591699_5592119_-|sigma-70-family-RNA-polymerase-sigma-factor
MVNILYIQLFLGQKSSLYIYRAEDKEEVKRIINYSCKHFLVPALFKHVFRHSRSVNISEEDLLNSKALWVSSSPQGLDNEPNSLEEDLQELPSQHQIILREKVSGKTLKEIASNLNISTSTVSRRLQEAKKHLKQLLEN
>NZ_CP043547.1|WP_153990774.1|5592450_5593452_-|WYL-domain-containing-protein
MSDSQPLRRQWNLIRLLSRQQLGVSLKELSEQLGVSQKTVRRDLTTLQDVGFLLEECVEEHGRKRWQILMNEKIAPLGFTLEEVAALYLGRRFLEPLAGTIFWEASQKAFQKIRTGLGDEALRYLEKMAVALHCTSIGHSDYSQQAETIDLLMIGIEDRKATKILYRSAKAAETTDYEVHPYGLVSHRQALYLIAFAPEHEQIRHYKVNRIRRVEVQTQRYSSPQKFDLQHYLEHAFGIFLDGGPIRRARVKFLPPVVQYVREHRWHSTQQFYSQEDGSLVVDFNLASFEELKSWVQSFGPDAIVLEPEDLREEVLEELNRLIQLYLEHASVK
>NZ_CP043547.1|WP_153990775.1|5594016_5595987_+|recombinase-family-protein
MSRSTHTMLQPPLEPRNGRELKVLAICRISTIHQDARSLEDQETMYRQWLIQHTSLPFQMEVIASQGSGEALDRKEYHRAIELVESDQFDLVISEDLGRICRRVHAHIFCEICEDSATRLIALNDHVDTALDDWRLGSFFAVMRHETSNRDTSRRIRRSLRNRFSQGGVVQTTIYGYIKPRGENTDDKLHKDPDAEPIYEEWFQRLENGESLQSIADWLNGQGIPVGPYVRVDQWSGPLVGRVTRNPILKGVRVRNRKISRRVNRTGRRQCIDAPPEERLERHCPHLAFIEPQRYDRIVQQLNDKNEMYRRGRAKGVDCRKNVPLRRTRFPGQMVDCGICGHKYVFGGHGQTDHLMCNGARGYHCWNGVSFDSVLAAMKISEAVFSELEALPDFDSAFLTMVQEESQKANGQRAEKLRSSTKEVERLDRELANLLKFIREGSSSNTLQEELVRIESEKSNLEYEIGCLKKSPVRELILPTAKELRELARSEFAGLAQDSYEFASLMRRLIPKLVVFPCQLCDGGQILLRAKFRLKLSGLLSDAHVEEVLATPLERVLTVDLFEPVQRAAFREEILRLKASLNPKTGKNHTEEEVSQLLGITRTAAQRSASMQRKMDRLGITDPYIPILEPPKDNKKLCRHKHKRYSFQPLESAGQI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP043547_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043547_4

5825319-5825430

Orphan

Consensus_repeat	Method
AAAAGAAGGAAAAGAAGGCGAGTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043547_4

>merge|NZ_CP043547|4|5825319-5825430|CRISPRCasFinder
CCAAGAAGGAAAAGAGGGCGAATCAAAAGAAGGAAAAGAAGGCGAGTCCTCCGACAGCGAATCGCAATCCTCTTCTGAATCGGAAGGAAAAGAGGGAAAAGAAGGCGAGTCC

>NZ_CP043547|4|4|5825319-5825430|CRISPRCasFinder
CCAAGAAGGAAAAGAGGGCGAATCA	AAAGAAGGAAAAGAAGGCGAGTCCTCCGACAGCGAATCGCAATCCTCTTCTGAATCGGAAGG
AAAAGAGGGAAAAGAAGGCGAGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043547.1\|WP_153990916.1\|5804829_5805549_+\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP043547.1\|WP_153990919.1\|5815438_5816488_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP043547.1\|WP_153990932.1\|5836903_5838745_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775
NZ_CP043547.1\|WP_153990924.1\|5826512_5827628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_162010520.1\|5808470_5813867_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP043547.1\|WP_153991705.1\|5814322_5815360_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238362
NZ_CP043547.1\|WP_174241935.1\|5816456_5817359_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP043547.1\|WP_153991707.1\|5839272_5840229_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP043547.1\|WP_153990930.1\|5834562_5835165_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371346
NZ_CP043547.1\|WP_153991704.1\|5806059_5806767_+\|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl\|CDD\|235486
NZ_CP043547.1\|WP_153990928.1\|5832067_5834044_+\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP043547.1\|WP_153990929.1\|5834058_5834415_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043547.1\|WP_153990920.1\|5817425_5819762_+\|BatA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377873
NZ_CP043547.1\|WP_153990931.1\|5835169_5836777_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP043547.1\|WP_153990922.1\|5822339_5824616_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP043547.1\|WP_153990921.1\|5819762_5822264_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238119
NZ_CP043547.1\|WP_153990926.1\|5829056_5830799_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP043547.1\|WP_153990917.1\|5807381_5808158_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_CP043547.1\|WP_153990925.1\|5827884_5829060_+\|NPCBM/NEW2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377970
NZ_CP043547.1\|WP_153990927.1\|5830898_5831999_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938

Protein	Function_ID	Function_description	E-value
NZ_CP043547.1\|WP_153990916.1\|5804829_5805549_+\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.77375e-78
NZ_CP043547.1\|WP_153990919.1\|5815438_5816488_+\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	5.89587e-89
NZ_CP043547.1\|WP_153990932.1\|5836903_5838745_-\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_CP043547.1\|WP_162010520.1\|5808470_5813867_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	4.14718e-14
NZ_CP043547.1\|WP_153991705.1\|5814322_5815360_+\|hypothetical-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	3.12165e-22
NZ_CP043547.1\|WP_174241935.1\|5816456_5817359_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	6.86709e-30
NZ_CP043547.1\|WP_153991707.1\|5839272_5840229_+\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.12889e-91
NZ_CP043547.1\|WP_153990930.1\|5834562_5835165_+\|hypothetical-protein	gnl\|CDD\|371346	pfam11023, DUF2614, Zinc-ribbon containing domain. This is a family of proteins conserved in the Bacillaceae family. Some members are annotated as being protein YgzB. The function is not known.	4.20179e-05
NZ_CP043547.1\|WP_153991704.1\|5806059_5806767_+\|redox-sensing-transcriptional-repressor-Rex	gnl\|CDD\|235486	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional.	2.17191e-97
NZ_CP043547.1\|WP_153990928.1\|5832067_5834044_+\|PDZ-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.06898e-49
NZ_CP043547.1\|WP_153990920.1\|5817425_5819762_+\|BatA-domain-containing-protein	gnl\|CDD\|377873	pfam07584, BatA, Aerotolerance regulator N-terminal. These proteins share a highly-conserved sequence at their N-terminus. They include several proteins from Rhodopirellula baltica and also several from proteobacteria. The proteins are produced by the Batl operon which appears to be important in pathogenicity and aerotolerance. This family is the conserved N-terminus, but the full length proteins carry multiple membrane-spanning domains. BatA ensures bacterial survival in the early stages of the infection process, when the infected sites are aerobic, and is produced under conditions of oxidative stress.	1.49826e-17
NZ_CP043547.1\|WP_153990931.1\|5835169_5836777_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.51547e-115
NZ_CP043547.1\|WP_153990922.1\|5822339_5824616_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.000115876
NZ_CP043547.1\|WP_153990921.1\|5819762_5822264_+\|hypothetical-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	2.94551e-07
NZ_CP043547.1\|WP_153990926.1\|5829056_5830799_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	3.12863e-69
NZ_CP043547.1\|WP_153990917.1\|5807381_5808158_+\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	5.72357e-07
NZ_CP043547.1\|WP_153990925.1\|5827884_5829060_+\|NPCBM/NEW2-domain-containing-protein	gnl\|CDD\|377970	pfam08305, NPCBM, NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.).	1.01187e-26
NZ_CP043547.1\|WP_153990927.1\|5830898_5831999_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.44471e-27

>NZ_CP043547.1|WP_153990922.1|5822339_5824616_+|hypothetical-protein
MNDRPQWLYLNRTLQRPLRRLARMIRIYVVLQGLAILAAFLGLAFWITFWLDWLLELPWSARSTMLGVVGIVSLLILCFGILWRVFARLSERGLAVVLERRFPTFHDALLTTVELRPQQSLGDYNPQMLELAERAAMAEAERIQVSKALNFGPLLIPLYLSFVLAGTIVGYAFFRPHYFDVYVARDLMLQTGVQWPRSILLHVVEPESLAETGLAKVANGEDLNLIIRAEKNPLFEQVEYPRYMTIDYQAQEQESEGSEGMTLEGDPDAEGQRYAYQFTSLLKDEYNIQIYAADGKLEDLKIQVVDSPSTTEMRLLCQYPSYTGLPSPHELPVTGSTSLPYGTKVTLVAGVNKPLIHARIDFENPDSETEQGFAFLRDDGLGFTSEFRMDESKQVLLTLTDLDRIESREPERFSITMKKDQSPEVDVQTTGIGRLITNKAVIPFEGTLRDDFGMTKTWFGYTIDAGEAEQKPTLKQPVGSTDLEINEGFEVNELNLEPGQTLTLKVQAEDNYEEWEEPLPQQGSSSPIPFEIVTEDQLRSQLELRELRLRERFEAIVAEVIQQREIVATLAAAEQATEIEEEIDAEGDLEEAEEIAEVREEAVPSAQANQLLEVQRAEQNGLKNSSEILGVADAFEDIVDQLRNNRIQTEELIVRLLDDIAKPLTEIAQEDFDELDQQLKALGRRVSQGSATEEEIAATVIQYDTILSEMRTVLNRMLELEDFNEALAMLRSIIEQQEDLRTATQEERRQQVRRFLFD
>NZ_CP043547.1|WP_153990921.1|5819762_5822264_+|hypothetical-protein
MGPFAQLSPDIATDSAGELSDSLSSTAQETLRETFEYARIPTSPLEWLLLTLVVIGITLFVIFAYRRDCAESPGWLAVILVGLRLAALVGLLLVWLQPQARIERRIQEDSVAAIIVDTSLSMGMQDDPENPTYAPTRSEEIQEVLAKSPLVQQLRNRHDVIVATFGQDIHEVVRWKRDTGETSQPASSTEAEEGDTLPLELTPETMDWQATLDPKAPETRIGQALRQLISEHRQDRLVGAILFSDGQHNAGVGLAPAIRLAKEHEVKVHTVGVGSMRTPINLRVADLIAPSRAYPEDDFESSVFVVGQGLGQERVAVELYSQPADNIGVEPKLEGSRETVLQQDGEPVEVSFQLKAEGPGRRTLTAKVRPVQGDYNPRDDQMQADVEIVERRTRVLLFAGGPTREYRFLRNQLFRDKEFEVDVLLQTAQVGIAQEADHILDVFPNSATEMAEYDCVVAFDPEWDGPGITPAQIDLLEQWVAEQSGGLLVVAGPVYTEEWVNDTRMAKVRSLYPIQFSRHHALLDASRFENREPSPILLTQEGMEADFLWLEDNAVESRDAWHDFDGVFGFYGVREPKPAATVYARYQETENLPEDEQPIYFAGQFYGSGRVFYIGSGEMWRLRSLAVAYFERYYTKLLRHLSEGRLLRGSRRGVLLVERERYLLGQTVVVRAQLNDSQLRPLEVPSVPLEVVLPDGTLFPQVTLVPDQGDRPGMYTGQFVVREEGEYRLNLNVPEAGDEGLLSRRLQVRISDQERERPQLDRVRLQSLAEETGGTYVEGAAKAPELVELLPSRARIRYQKDRPEPLWDSPWIMGTICGLLCLEWLLRRCFKLA
>NZ_CP043547.1|WP_153990920.1|5817425_5819762_+|BatA-domain-containing-protein
MLEFLNPALFPFLWLAAIPIAIHLLNLTRRRRVQWAAMEFLLESQRKNRAFVWLRQLLLLLLRMAAIAILVLIFARMVFLNDLTLLQGNQTHHMVILDDSFSMSAQDSRSETPFLRAQQAIVRLGQRAADEGGNHRFTLLRTSQTQPDFLEKLVQVNFAQELQQRLEEISVSSLSSGPESALEQALEWLPTQKQDQKILYLVSDFRSKDWEDTQRITALLREFEQEKTKLVLIQCEGAPPANLSLSSLRSVSRTLVADVPLFLEVAVTNFSQDPQTDVELLIYEDNTLRPGSRIDLIPPGETRTKRFQVRIPTAGNHTVRVELPNDSISLDNARETVLQLPLAIKTLLIDSSPDGRNARYVQSALDPGGNTKTGNTTQIELPGFLNSNDLSEFQVIYLTNVGQLDPPAIEQLEDFVKAGGGLGIFLDGQSKAEFINTQLYRNGEGFFPAPLSEPSKTLMDQLQERFPFGITPVLQRRWEELMLAQDENLPDVQRSVHPIFESFAEERNSLLDLVRIDHLWRLDPEWEAGVNNRTTVAAEGRIPEITVFDPNAENPIQWTSRYVPLVLDRPFGDGRVVSVMSSASTVWNNWARNPSYVLMLLEMQSYLAAPTEGTITRQVGQPLVVEWDAAEFFPELDIERFQEGALENSVELAGEAANDEGDRLGVRYDSTFDPGIYSVALRPIDGSERSLKTFAYNVNPTEGNLQTVSSTQLATIMEGITYTFTRAGAFRGSDADGGDIKLYDLLLYWLVILLLLEQTFAYFQSYHPPATAGVEGVS
>NZ_CP043547.1|WP_174241935.1|5816456_5817359_+|DUF58-domain-containing-protein
MPDSKPYLHPEAISRITRLEMRARHIVEGFLSGMHRSPYFGQSIEFLQHREYVQGDDPRHVDWKVWAKQERFYIKQYEEETNLRCLFLVDVSKSMQYQSGALSKYDYGCTAAVSLAYLLLKQQDAVACVPFDDRVRAQLPFKSTRQHLMAVIESLKTLKPTDKTGMFKILKKVAETYPRRGMVVLISDLLTDRDSLMKGLRLLRQRGHDVLILHIMDDEELDFPFQGPTRFEGLESDDLLNCNPRALREGYLKALEKFLEDVRIGCAKNVVDYKLIRTSEPLDAVLATFLSNRLGMHHRN
>NZ_CP043547.1|WP_153990919.1|5815438_5816488_+|AAA-family-ATPase
MSEASEVSPELTEKLGVAREKLLSQFAQVIVGQEEVLEQLMICLFSRGHCLLEGVPGLAKTLMISTLARTLNLSFKRIQFTPDLMPADITGTEILQEDRATGAREFRFLEGPIFSNVVLADEINRTPPKTQAALLEAMQERQVSVGNTRHPLADPFFVLATQNPIEQEGTYTLPEAQQDRFMFKVFVKYPSFEEEMEIARRTTGKFSDTIEPVLTGEEIIELQQLVRQVPVGDHILRYALLLVRQTRTGEPGVPGFVRENVDWGAGPRAVQYLILGGKARALLYGRSHVTTEDIQALACPVLRHRIGNNFAAESEGITSDHIVERLVKETPTKEDELTNDARFKTLFAS
>NZ_CP043547.1|WP_153991705.1|5814322_5815360_+|hypothetical-protein
MQKILLLSLTTTFLFTSYTFAETERRQVDPELKAAIDRGLEWLSHHQSRLGHWSANNAQYPTAMTALCGTAMLAEGSTTTQGKYCEEIRRAVDFVVSKSRSNGLIGEPTRDNRYTYGHGFSMLFLSQVLGEEEDADRREVLVDVLTRAVDFTGKAQTTSGGWGYVSARDGNDFDEGSTTITQVQGLRGCRNAGIPVDKDTIDQAIDYIRICMTPDGGVRYSSKSGGGARPAITAAAISCLFNAGAYDSEMAPKLLEFCKQSNELNKVNYGASGHWHYAHYYYSQVLYREGGEEWVSYRDRLMRKILSEQSSDGSWQQGYVGPVYTTAINLTILQLENANLPIYQR
>NZ_CP043547.1|WP_162010520.1|5808470_5813867_+|PQQ-binding-like-beta-propeller-repeat-protein
MVPITNSDFFCEKVRNETVVARVDFRGYDAITRSDSTTDGIYFEYVDDSSEVAFSQVALVASLCFLHGLFARKFSAMNIPLNKVFAMLRQLSVHEAPSFGNLSLFLLACAFPSLLMAQGGRAPVQVAQAGSDLDEAAIFVTDRPTMRLMSRAEENLEEKRWGEAVERLGQVLDGPEDYFYQPDRFLNSFLSLKARALELIGEMPEEGRETYQRHYGPIAQNLLEEAVALGDINQLAEVARRFFHTEAGYEATHRLGMIHLDHMRPLAAALCFKRLLAIPQASEKYEPQLSILTALCFVRVGSDEALDEARKTLQEARIQYNSKPLSFLGERASWFASYADPLDWLAANLGTQLQDTGTSREEWVMHRGNPARNATTEGGIPLLSYNWRVPVSNDKPTVEQYVEEFQSDLLGRNVGLLPGLYPLVVKLDLQEASLLREDSVRHWGRFVESLKDENPVGISTPQKRIWSFLSGSLQDQLTEVSQDSMPPAEVRQRLVEELNAIMTRGDFYEATAWQGVPSRKEAEDLLKKGIGNLSKDAIFRMNRVWLEAAFDSLISMSYANVVLVRSYNNLLAIDFVTGKRVWEVPVSEADDPLERILYGAKSGQGDEVVAQAAKGVGHRLFHDTTFGTLASDGTHVFSIEDLPLPLQEERGRSFQPMLVIGNKSQTTTGPVDFNRLVAYDIRTGKLRWEVGGPKGVEGELTQAGMFFLGPPLPLSGRLYCIAEVSREVRLIVLDADTGQQEWSQTLALVETSILEDPTRAASGVSPSYANGVLVCPTASGAVVAVDLSNRSLLWGYRYESDDRRSGRRIPSQSTSLSSNELEDFDRWSDSLPTVIRDSILLTPVESNELHCLSLVDGQVLWKASRDWEYEHHSTESYDSGLYVAGVEGDKILIVGTHGMVARSMKDGDPLWEMQWPDAGSAPSGRGFLSGTDYYVPMTDGKVLQVDAITGKVKAKATSRDQLIPGNLVCFDGSILSQGVDFVYCFNELAKLDDDITQALANNPKDSEALRRRGEIFLQREQTKEAVEYFEKALEQRESPYTRELLVEALLEEIKTDFATNQNRVPEIERHLAALPVTSQRHLRLKFLRVLALGQEEIGELDAAFKTWLSFVDPEAELQELEMVEQDWSVRPDCMFQGKVAELYHRASSAQRSGIELVIQERFQEALSAGDSLAALDQFLDRFGSIASADLARQKLADLHETEGNYLQAEQLWLSLMESPDRVRAAEATARMLSLLMNSRFFNEKRISEVMYFMDLLENEYREVPCWEGKTGAEFAKLRKQEIASLNVLTNYAWPNGNVESDVESRNAQGWRYYPVQPLGRVSPFFHNGGIVLDQTQRRFIGRNRLGEAMWEVSLRNEDDHGGNFIGLNPYANRFRSNGHLVMLWTGLNIFAIDTLNPDSQGRANIIWQKNMNEGLPGLGRNQGVRIHIVVRNGQRQTRVTDHLNQPLPPVGPISQDYVCFHRRRDLVAVDPYTGEELWIRHQVDPGSEIFGDAEYIFVAPEQNDRDTTEVTATVYRALDGQFLKNVTIPSVHQRLAVFGRYVLGWTEKNGKKVLWKQDVWEDRTLWEEAFDTDSLIDSIEEDQLVVYEPDSSKVTIVNVSDGELLAQQEVDTSETQEDVQELFLLRSADRFLVLAGEGRMADDTIRAVYAVNGGMDNPNFHGNIYAFDRKSGELAWQKRITHQAIPLRQPEDLPVLIFACRLQVIKQSTPQGRASYSNEYEVLCLNKEDGRIVYSRRSNESISGFEAEADLQEREVTIKMLRSTVKLKYTNDPIPEPSEPAAVAEDANKEEEEVEPED
>NZ_CP043547.1|WP_153990917.1|5807381_5808158_+|FHA-domain-containing-protein
MTQNSEKEAFDPYHKWLGIRNCPKPPNHYRLLGLEPFEDDLEVIAEAADRQMGHIRTHQSGKYAELSQKLLNELARAKICLLNPKRRSAYDEKLKETLEVEKQGTDAYLEALPLTATDRESVEAPNRSMLSTSPRLTSSEMEEDFEGRTRRPSPLTIQLTVTQGPDEGASYRCSRRKSFTVGRSEQADFSLPEDLTLSRVQFTIRVNPPVCILRHMSDRKTTQLNEELVSEAVLKDGDIIQAGQQTVIRVEISQLLPS
>NZ_CP043547.1|WP_153991704.1|5806059_5806767_+|redox-sensing-transcriptional-repressor-Rex
MAPHKEDDPQPVPPEQVPKAVVSRLSLYLRELEHLDRLGHATTSSGRLGQTLGFTDAQVRKDLAHFGQFGYPGIGYRTEELLRVIRTILGTNQRWDVALVGAGNLGRALLKYRGFEERGFRIAAVFDTDLSKVGTQLEGFEILDASRLSEIIKSSKMKLAAIAVPAPAAQEVANRLAAAGIQGILNFAPVTINLPNGIRIISVDLAIEFEQLAFAVVNRFRVDPAEDPSKESQTD
>NZ_CP043547.1|WP_153990916.1|5804829_5805549_+|response-regulator
MSQPKILIIEDEPSLVEVLAYNLEAVGYEVLSAGDGEAGLEAARLHRPDLIVLDIMLPLMDGLEVCRQLRADERTRGIAILILTAKAEEVDEVVGFQMGADDYVIKPFKIGSLTQRIRALLRRTQHSGTDQEILAAHGLELDRWRHRSTLNGEELPLTVTEFRLLWALARQPGRAFTRHELLEAALGDSAVAQERTVDVHIKAIRQKLGRHAGLVETVRGVGYRFPEGPPALDQEETIP
>NZ_CP043547.1|WP_153990924.1|5826512_5827628_+|hypothetical-protein
MNLTQLYDCNSQNRWRCRVSLTFAFVGTMLLAASPALAQQAPEELEKQYTFYPLPTEEIGPRLENWLESQPLAEPARQQARKVWEALAEESDASARLKQLVLSVAQVNAEVESVYQLCMQPRQSIILPDLTWLQEQDAKDFVWGNVRLFVGQWLARHRYYDHSSLMLEGISHDQLIDPASFFFSEAVCFQQLIKQKEALAAIDRLLEETAACPERYRQVAMLMKEDISKLEEESLDHIARQMADSQRRLELAQATPEIDVTQQVQDNIVNSLEQIIKKLEEQQQQQAGGAAPGSANGNRSLQPANESTPAGGGGPGEVGPRDLKPGEQWGELPPKERERAIQQAAKNFPSHYREVIEQYFRKIASEPARDE
>NZ_CP043547.1|WP_153990925.1|5827884_5829060_+|NPCBM/NEW2-domain-containing-protein
MISPWLAMLVLTTTPSVDVITLQNEFSGNVQQISADGIQLETDTDTQEIAWRDLLQLDFDRTARPPSAGAEVRLTDETTLKSSSLSIADSVLSCQLADSLTAKVPVKGVRSILFGELNETLTPQWQSILQSKPTTDLLVIQKGETLDYLEGIIGKMDETTIEFTLEGDEIPVPKDRVFALVYFQNIAPSKPPTILGYLQDTAGNQFTLAKVSWKPSTPDSLLSLETIAGMRVSVPLETVVRIRGSVEYLSDFEPLNVKVEHPVPLPYTQWEPQRDRHFYGGPLQIGETVYRKGLSLHSRTKIEYYLGGKYRKLLGFAGIDQAASDSLGNVRLVIRGDNRILLEAELLVSDPQPVELDLNLAKVQRLEILVDYGEGNDTGDHVCLGNLRLIK
>NZ_CP043547.1|WP_153990926.1|5829056_5830799_+|trypsin-like-peptidase-domain-containing-protein
MKRFAGWIVVLTVWLSWNLSTQAAAPEVLEAEAARVAVIQKAMPAVVAIFGGAGDGGGSGVLISPDGYALSNYHVTKPAGNAMKCGLPDGKLYDAVIVGIDPTGDVALVKLLGRDDFPYAEIADSDHVRVGDWTFAMGNPFLLATDFTPTVTYGIVSGIHRYQYPAGTLLEYADCIQVDASINPGNSGGPLFNAEGQLIGINGRGSFEKRGRVNVGVGYAITINQIQNFLGHLKSGRVVDHATLGARVGTSPDGQVIVTDILQSADAYRRGLRYGDEIVRFADRPIRTVNQMKNALGIFPKGWRIPLVYRRDGKRHRIFIRLEGVHRSGELQELLAGPRRPMMPQPKPDEEDEAPDPEMPAGHESSPMPEIAKAHYESKAGYANYYFNRLQQETVWQNFLQYGDFQNLRGNWNMTGSTDQGQPVVFDLETEQAIAMLPTGNANIPITVDLSAELRPLGSGGLLPALVIWKHLLTHGITEFGPLYYLGTAPLPEDDVRYHVLIGTYSRVEAHFYFHPETGQLVKLETFPEDDTDPCEVFFSDYAEVEGRSVPHRWEVYHADQRFGTYTFTDFHLEAQADYE
>NZ_CP043547.1|WP_153990927.1|5830898_5831999_+|trypsin-like-peptidase-domain-containing-protein
MQSLWISRTGKIQPASFRAVRLVFFLLMLLSCGLWIGSNPLFAQANFYQDVFVQSRNRMVKIYGAGGFQGLEAYQTGCLISGEGHVLTVWSYVLDTNYITVVLDDGRRYEEAELVGADPRREIAILKIKGENFPHFDLSQSAQANVGSRVVAMSNLYGVATGNEPVSVQHGVVAAKAPLNARRGVFETPLQGDVYVLDAMTNNPGAAGGIVLNREGKLLGMLGKELRSTLNNTWLNYAIPFDSDFQETVELIKQGQYVPASIDPEAELPPYPLTLTSLGIELVPDVVQRTPPFIDFVYEGSSAAEAGLEPGDLIIFLDGQLIQSCKILQETIRRIDSTEDVSLTITRGNELLEFELSGSLLNTIGP
>NZ_CP043547.1|WP_153990928.1|5832067_5834044_+|PDZ-domain-containing-protein
MNRFFSMLLLLVAFLSATASSAQEPIGGLEEEAFQQAMQNVAPSVVKIDTIGGLETTGSGRNQLRIGTGPTTGLLLNADGYIITSSFNFIQKPSQILVTLDLGKRFPAQIIATDHSRLLTLLKIEIEPALQNQILEPEPVPAEEVEVGQWSLAIGRTFPVAQPNLSVGILSAKNRIWGKALQTDAKISPNNYGGPLIDIQGRVYGVLVPLSPSQDQGIAGVQWYDSGIGFAVPIQDVLRTLSLLQSGEDLYPGLIGIAFAGKNELFDPPLISVVRPQSPANEAGLLPDDVILAVDGVKVESIRELKQQIGPRYAGETLTFTYLRDDAEQKTKLTLAQELLPYEHPFLGILPVRGTTENAGLPIRYVYAESPAADAGLEVGDLMLSIAEQPVTTLEEAREQINRLKVDVPCEVTFQRSGKTEVATVKLASLPTEIPEELPPILRQPQPADPNGPATGLLTGQKIPEFPHEYTFYVPATYQVEEPAGLLAWLTPPGEEVGDDLVAQWKDFCEERNFLLAILSPDSAESWQPTEVNYLKKVLGELENQYALDPHRIAVAGWRSAGAMAFLWTFQDRERIQGLIACESPLVGFRPEDNMPEMRLAIAMVHDPEGRRVEAIEGTIEALQVRKYPLTILNQSEPSLTDLNQEALGRWLDSLDRL
>NZ_CP043547.1|WP_153990929.1|5834058_5834415_+|hypothetical-protein
MHRPTVGVLALVFLLSAAGLLFYNPFGEAIFAACVRLGFLLGALWLALPNVKRSTNWWIMGIVVTVLLVLSTRGSMVVKVGWLIVGLIVFALLWPQIKRAEREAKQQSGQSSQLKGPR
>NZ_CP043547.1|WP_153990930.1|5834562_5835165_+|hypothetical-protein
MGFLYQCPSCQQELSGEASFAGQQVQCPYCQAAHVHPKSPDAAGSPLDEDGLGMGAGYEEEADEDPLGDPDAPVMGEAFGGGLGGGLGDDYDEGGEDEFGIGGEGTGMEESDGTLSIPCPKCGQVLPTPPEMLGEDAACPYCNEVMTLRKEDSLEYKKEREEYYRMKDEEFSRKALNWAITASILVGISLIGMFLFLIFA
>NZ_CP043547.1|WP_153990931.1|5835169_5836777_-|FAD-dependent-oxidoreductase
MAKYDYVIVGGGHNGLVAAAYLAKAGKKVALFERKDHFGGASCTEELWPGFHVSTASYVISLFLPEIRRELHLEDYGLKVLPRNPSSWTPLPDGRSLLLGSDAKENQAEIAKFSPQDAEKFSDYEALLDRVAEHLEPLLMAQAPNLLPGPGRPFSWMRTLAESSRAMQAARRFLKWGEETAAAWELMTGAARPLLERWFESEPLRATLATDAVIGTFASPSSLGTAYVLLHHVMGEAGGKRGVWGYVQGGMGGLASALQQACQDLGVELHIRAEIETIQIENGKATGILLKDGRSIEGKAIVSNLDPHQTFSRLSDRKALPESFQRALKQFDYESASAKLNLALSEAPQFLAAPSQESLHHLRGTIHLCPDMDYLERAYQEARLGKSSSEPVLEITIPSIVDPTVSPEGCHVMNVFIQYAPYHLKEGSWDEQREVFADRCIALIGKYAPNVPGSVLHRQMLTPLDLERDFRLTGGNIFQGAMGPHQMFLARPLPGWADYQTPITGLYLCGACTHPGGGVMGACGRNAARAILRKG
>NZ_CP043547.1|WP_153990932.1|5836903_5838745_-|30S-ribosomal-protein-S1
MVDRNLIRQFDVDEDDFGGFDDAAISTLLLDEEPPAGLNQILKGRVVKIEGDVAIVDVSYKSEGMVPLNEWTEDEPEPQVGDEVSVLLEEVEDAQGLIRLSKRKAEKIQAWNDVMESVSEGHVVTGPVTRKIKGGLLVDIGVNVFLPASQVDIRRPSDIGDYIGRTVQCEVLKIDETRRNIVVSRRALIESERTERKSRLLKKLEPGQTRRGVVKNIADFGAFVDLGGIDGLLHITDMSWGRINHPSEMVSLDQEIEVMILNVDRDKEKIALGLKQKSPSPWENIDKKYPVGSEAEGKVVNVMTYGAFVKLEDGIEGLVHISEMSWTKRISHPTDMVKIGDEVKVVVLGINRDKQEISLGMKQTQENPWDKFADRYPPGTRVNGTVRNLTNYGAFIEIEEGIDGLLHVSDMSWTRKISHPSEVVEKGQKLDCVVLSVDKERRRIALGLKQLDEDPWEDYIPGKYQPGMTVTGTVTKLTNFGVFVGLEEGLEGLLHISELADHKVDNPEEVVKVGEEIEVKILRVDTNDRKIGLSRKRVEWAEDAEDSTEGGDDAAEAGSDDAAKATDPSKLKGGVAGSSGPLFNPNMASDAPKAEEEPAAEATEEEAASETEN
>NZ_CP043547.1|WP_153991707.1|5839272_5840229_+|AAA-family-ATPase
MMLQELQKVIIGQEEVIEQIFAAIFTRGHCLLEGVPGLAKTLLVSTLAKILDIEFKRIQFTPDLMPSDITGTNVLEEDEQGRRNFRFVQGPIFTSVLLADEINRTPPKTQAALLQAMQEREISVGQTTYKLPEPFFTIATQNPIEQEGTYPLPEAQLDRFMFNIKVDYPTLEEEEKILSATTRGENVEVRKILSGKAILNVQKLVRSVAISEHQVKYVARLVRSTRPKDDSAPDFVKEMVDWGAGPRAGQFLIFGGKAMAAMDGRFSVDVGDIRKVAIPVLRHRISTNFQAQAEGLTNEDVIEKLIQAVPAPSVPKYE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1756857-1756890	6	0.824
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	116233-116266	8	0.765
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1022768-1022801	8	0.765
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NZ_CP026745	Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence	134143-134176	9	0.735
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NZ_LR134455	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence	55600-55633	9	0.735
NZ_CP043547_2	2.33\|3690316\|37\|NZ_CP043547\|CRISPRCasFinder,CRT	3690316-3690352	37	MN693895	Marine virus AFVG_250M461, complete genome	38809-38845	9	0.757
NZ_CP043547_2	2.48\|3691401\|36\|NZ_CP043547\|CRISPRCasFinder,CRT	3691401-3691436	36	NZ_CP040803	Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence	54464-54499	9	0.75
NZ_CP043547_1	1.12\|453662\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453662-453695	34	MT773555	Myoviridae sp. isolate BML_3 genomic sequence	74410-74443	10	0.706
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	476087-476120	10	0.706
NZ_CP043547_2	2.4\|3690315\|38\|NZ_CP043547\|PILER-CR	3690315-3690352	38	MN693895	Marine virus AFVG_250M461, complete genome	38809-38846	10	0.737
NZ_CP043547_2	2.19\|3691400\|37\|NZ_CP043547\|PILER-CR	3691400-3691436	37	NZ_CP040803	Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence	54463-54499	10	0.73
NZ_CP043547_1	1.14\|453794\|34\|NZ_CP043547\|CRISPRCasFinder,CRT,PILER-CR	453794-453827	34	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	22484-22517	11	0.676
NZ_CP043547_2	2.53\|3691764\|36\|NZ_CP043547\|CRISPRCasFinder,CRT	3691764-3691799	36	NZ_CP048631	Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence	37758-37793	11	0.694
NZ_CP043547_2	2.24\|3691763\|37\|NZ_CP043547\|PILER-CR	3691763-3691799	37	NZ_CP048631	Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence	37758-37794	12	0.676

1. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 6, identity: 0.824

tggcggagaacgccgagtccgccgaagacgacgc	CRISPR spacer
agacgagggacggcgagtccgccgaagacgacgc	Protospacer
 *.**..*.*** *********************

2. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 8, identity: 0.765

tggcg-gagaacgccgagtccgccgaagacgacgc	CRISPR spacer
-agcgtcacgacgacgagtccgacgaagacgacga	Protospacer
 .***  * .*** ******** ***********

3. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 8, identity: 0.765

tggcggagaacgccgagtccgccgaagacgacgc	CRISPR spacer
tttcggagaacgccgatttcgccgaagcggtcgg	Protospacer
*  ************* *.********  * **

4. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026745 (Nocardia cyriacigeorgica strain MDA3349 isolate MDA3349 ancestor plasmid p_unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

tggcggagaacgccgagtccgccgaagacgacgc	CRISPR spacer
ccggtgagaacgccgattccgccgacgacgttgt	Protospacer
. *  *********** ******** **** .*.

5. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134455 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence) position: , mismatch: 9, identity: 0.735

tggcggagaacgccgagtccgccgaagacgacgc	CRISPR spacer
ccgatgcggtcgccgaggcggccgaagacgacgc	Protospacer
. *  * *. ******* * **************

6. spacer 2.33|3690316|37|NZ_CP043547|CRISPRCasFinder,CRT matches to MN693895 (Marine virus AFVG_250M461, complete genome) position: , mismatch: 9, identity: 0.757

ttcacccgacgaggaagaatagtgctttacgacgcac	CRISPR spacer
ttcatccgatgaggaagaatagtgctttagaatatca	Protospacer
****.****.******************* .*...

7. spacer 2.48|3691401|36|NZ_CP043547|CRISPRCasFinder,CRT matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 9, identity: 0.75

tctagagttaaagtactcgcctgacttctacactct	CRISPR spacer
gcaattgttaaagttctcgcatgacttctacaataa	Protospacer
 * *  ******** ***** *********** *

8. spacer 1.12|453662|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 10, identity: 0.706

aaggaattaaaatgccgagacaaaaaaaagaatt	CRISPR spacer
ctccaattaaaatgccaatacaaaaaaatgctat	Protospacer
    ************.* ********* *   *

9. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

tggcggagaacgccgagtccgccgaagacgacgc	CRISPR spacer
cgctgctcggcgccgagtccgtcgaagacgccgc	Protospacer
.* .*   ..***********.******** ***

10. spacer 2.4|3690315|38|NZ_CP043547|PILER-CR matches to MN693895 (Marine virus AFVG_250M461, complete genome) position: , mismatch: 10, identity: 0.737

cttcacccgacgaggaagaatagtgctttacgacgcac	CRISPR spacer
gttcatccgatgaggaagaatagtgctttagaatatca	Protospacer
 ****.****.******************* .*...

11. spacer 2.19|3691400|37|NZ_CP043547|PILER-CR matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 10, identity: 0.73

ctctagagttaaagtactcgcctgacttctacactct	CRISPR spacer
agcaattgttaaagttctcgcatgacttctacaataa	Protospacer
  * *  ******** ***** *********** *

12. spacer 1.14|453794|34|NZ_CP043547|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

tggcggagaacgccgagtccgccgaagacgacgc	CRISPR spacer
tggcggagaacgccgtgcccgccgtcaggtagat	Protospacer
*************** *.******  ..  * ..

13. spacer 2.53|3691764|36|NZ_CP043547|CRISPRCasFinder,CRT matches to NZ_CP048631 (Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence) position: , mismatch: 11, identity: 0.694

tgctgtcggacggatgctcgccagacgatgagcttg	CRISPR spacer
aagcatctgacggatgcgcgccagacgatgatgggg	Protospacer
 . ..** ********* *************    *

14. spacer 2.24|3691763|37|NZ_CP043547|PILER-CR matches to NZ_CP048631 (Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence) position: , mismatch: 12, identity: 0.676

atgctgtcggacggatgctcgccagacgatgagcttg	CRISPR spacer
gaagcatctgacggatgcgcgccagacgatgatgggg	Protospacer
. . ..** ********* *************    *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

255738 : 304356

Paenibacillus_phage(28.57%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162010181.1\|255738_256290_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153988178.1\|256199_256577_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-23	43.9
WP_153987192.1\|256890_258870_+	sulfatase-like hydrolase/transferase	A0A2K9L727	Tupanvirus	1.6e-07	21.3
WP_153987193.1\|258973_259477_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_153987194.1\|259490_260840_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_162010182.1\|260967_262287_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153991463.1\|262734_264129_+	sulfatase-like hydrolase/transferase	A0A2K9L1A5	Tupanvirus	2.8e-06	22.3
WP_153987196.1\|264154_265342_-	hypothetical protein	NA	NA	NA	NA
WP_153987197.1\|265341_266481_-	hypothetical protein	NA	NA	NA	NA
WP_153987198.1\|266666_267737_-	hypothetical protein	NA	NA	NA	NA
WP_153991464.1\|268173_269316_+	hypothetical protein	NA	NA	NA	NA
WP_153987199.1\|269406_269799_-	DoxX family protein	NA	NA	NA	NA
WP_153987200.1\|269927_273215_-	c-type cytochrome	NA	NA	NA	NA
WP_153987201.1\|273269_274976_-	FecR domain-containing protein	NA	NA	NA	NA
WP_153987202.1\|275027_275564_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_153987203.1\|275823_276507_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_153987204.1\|276503_277910_+	hypothetical protein	NA	NA	NA	NA
WP_153987205.1\|277986_281220_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.7e-51	21.5
WP_153987206.1\|281491_282760_-	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_153991465.1\|282983_283520_-	superoxide dismutase family protein	W6JIT4	Anomala_cuprea_entomopoxvirus	1.6e-18	36.7
WP_153987207.1\|283773_285714_-	cation acetate symporter	NA	NA	NA	NA
WP_153987208.1\|285710_285953_-	DUF485 domain-containing protein	NA	NA	NA	NA
WP_153987209.1\|286369_287062_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA
WP_153991466.1\|287388_288795_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153991467.1\|288868_290023_-	ThuA domain-containing protein	NA	NA	NA	NA
WP_153987210.1\|290045_291479_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_153987211.1\|291570_294774_-	DUF1553 domain-containing protein	NA	NA	NA	NA
WP_162010183.1\|295231_297571_+	DUF1592 domain-containing protein	NA	NA	NA	NA
WP_153987213.1\|297584_298964_+	DUF1552 domain-containing protein	NA	NA	NA	NA
WP_153987214.1\|299030_300413_+	DUF1552 domain-containing protein	NA	NA	NA	NA
WP_153987107.1\|300512_301391_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.6e-20	47.2
WP_153987106.1\|301381_301882_-\|transposase	transposase	NA	NA	NA	NA
WP_153987215.1\|302311_303274_+	DUF4190 domain-containing protein	NA	NA	NA	NA
WP_162010184.1\|303517_303895_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-23	45.9
WP_162010185.1\|303804_304356_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

348106 : 409951

Leptospira_phage(25.0%)

transposase,integrase

attL 371335:371351|attR 417487:417503

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162010189.1\|348106_349153_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_153987246.1\|349139_349373_+	hypothetical protein	NA	NA	NA	NA
WP_162010190.1\|350203_351757_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153987248.1\|351828_352047_-	topoisomerase II	NA	NA	NA	NA
WP_153987249.1\|352584_353853_-	hypothetical protein	NA	NA	NA	NA
WP_153987250.1\|353849_355352_-	hypothetical protein	NA	NA	NA	NA
WP_153987251.1\|357750_359166_+\|transposase	transposase	NA	NA	NA	NA
WP_153987252.1\|359610_361143_+	hypothetical protein	NA	NA	NA	NA
WP_153987253.1\|361779_372354_+	VCBS repeat-containing protein	S5W9C6	Leptospira_phage	1.6e-08	34.5
371335:371351	attL	NA	NA	NA	NA
WP_153987254.1\|372359_372848_+	hypothetical protein	NA	NA	NA	NA
WP_153987255.1\|372952_373429_+	hypothetical protein	NA	NA	NA	NA
WP_153987256.1\|373425_373710_+	DUF5076 domain-containing protein	NA	NA	NA	NA
WP_153987257.1\|373867_375517_+	hypothetical protein	NA	NA	NA	NA
WP_153987258.1\|375519_376122_+	hypothetical protein	NA	NA	NA	NA
WP_153987259.1\|376293_377871_+	hypothetical protein	NA	NA	NA	NA
WP_153987260.1\|377836_378406_+	hypothetical protein	NA	NA	NA	NA
WP_153987261.1\|378586_378991_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_153987262.1\|379289_379853_+	hypothetical protein	NA	NA	NA	NA
WP_153987263.1\|380196_380550_-	hypothetical protein	NA	NA	NA	NA
WP_153987264.1\|381406_382840_+	hypothetical protein	NA	NA	NA	NA
WP_153987265.1\|382812_383616_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153987266.1\|384154_385318_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_153987267.1\|385539_386778_-	hypothetical protein	NA	NA	NA	NA
WP_153987268.1\|387255_387747_-	hypothetical protein	NA	NA	NA	NA
WP_153987269.1\|387776_388982_-	nucleotidyltransferase	NA	NA	NA	NA
WP_153987270.1\|389455_389917_+	hypothetical protein	NA	NA	NA	NA
WP_153987271.1\|390542_391775_+\|integrase	tyrosine-type recombinase/integrase	A0A1B1IUW9	uncultured_Mediterranean_phage	4.9e-39	30.0
WP_153987272.1\|391779_392697_+	hypothetical protein	NA	NA	NA	NA
WP_153987273.1\|393013_393298_+	DUF1580 domain-containing protein	NA	NA	NA	NA
WP_153987274.1\|393423_394179_+	hypothetical protein	NA	NA	NA	NA
WP_153987275.1\|394181_395591_+	hypothetical protein	NA	NA	NA	NA
WP_153987276.1\|395587_395977_+	hypothetical protein	NA	NA	NA	NA
WP_153987277.1\|396290_397289_+	hypothetical protein	NA	NA	NA	NA
WP_153987278.1\|397255_398545_+	hypothetical protein	A0A142KBX8	Gordonia_phage	8.8e-15	32.2
WP_153987279.1\|399003_399435_+	hypothetical protein	NA	NA	NA	NA
WP_153987280.1\|399520_399844_+	hypothetical protein	NA	NA	NA	NA
WP_162010191.1\|399997_400276_+	hypothetical protein	NA	NA	NA	NA
WP_153987282.1\|400429_400573_+	hypothetical protein	NA	NA	NA	NA
WP_153987283.1\|400614_401163_-	hypothetical protein	NA	NA	NA	NA
WP_153987284.1\|401391_402552_-	hypothetical protein	NA	NA	NA	NA
WP_153987285.1\|402894_403077_+	hypothetical protein	NA	NA	NA	NA
WP_153987286.1\|403094_407609_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153987287.1\|407979_408123_+	hypothetical protein	NA	NA	NA	NA
WP_153987288.1\|408565_409036_+	hypothetical protein	NA	NA	NA	NA
WP_153987107.1\|409072_409951_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.6e-20	47.2
417487:417503	attR	NA	NA	NA	NA

DBSCAN-SWA_3

463437 : 538341

uncultured_Mediterranean_phage(40.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153987325.1\|463437_466845_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_153987326.1\|467282_470249_+	glycosyltransferase	NA	NA	NA	NA
WP_153987327.1\|470178_472188_+	hypothetical protein	NA	NA	NA	NA
WP_153987329.1\|473513_479387_-	FG-GAP repeat protein	NA	NA	NA	NA
WP_162010193.1\|480782_482780_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_153987331.1\|483649_484345_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153987332.1\|484341_484785_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153987333.1\|485046_486657_+	FG-GAP repeat protein	NA	NA	NA	NA
WP_153987334.1\|486924_487839_+	hypothetical protein	NA	NA	NA	NA
WP_153987335.1\|487846_489826_+	AAA family ATPase	NA	NA	NA	NA
WP_162010194.1\|489836_491705_+	DNA translocase FtsK	G1D482	Mycobacterium_virus	4.3e-39	33.5
WP_174241907.1\|495954_496338_-\|transposase	transposase	NA	NA	NA	NA
WP_162010195.1\|496343_496733_-\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	1.0e-11	38.4
WP_153987339.1\|497086_497698_-	hypothetical protein	NA	NA	NA	NA
WP_153987340.1\|498069_499083_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153987341.1\|499242_500715_+	DUF1254 domain-containing protein	M1H738	Paramecium_bursaria_Chlorella_virus	6.9e-32	26.5
WP_153987342.1\|500765_502334_+	DUF1254 domain-containing protein	NA	NA	NA	NA
WP_153987343.1\|502767_512634_+	DUF11 domain-containing protein	NA	NA	NA	NA
WP_153987344.1\|512811_513354_-	dihydrofolate reductase family protein	NA	NA	NA	NA
WP_153987345.1\|513409_513715_-	hypothetical protein	NA	NA	NA	NA
WP_153987346.1\|514064_515423_-	hypothetical protein	NA	NA	NA	NA
WP_153987347.1\|515586_516465_-	hypothetical protein	NA	NA	NA	NA
WP_153987348.1\|516881_517721_+	hypothetical protein	NA	NA	NA	NA
WP_162010577.1\|519129_519948_+	DUF1588 domain-containing protein	NA	NA	NA	NA
WP_153987350.1\|519947_520154_+	hypothetical protein	NA	NA	NA	NA
WP_162010196.1\|520220_520748_+	DUF1552 domain-containing protein	NA	NA	NA	NA
WP_153987352.1\|520867_521758_-	hypothetical protein	A0A1B1IUW9	uncultured_Mediterranean_phage	6.5e-17	26.1
WP_153987353.1\|522670_523108_+	hypothetical protein	NA	NA	NA	NA
WP_153987354.1\|523785_523968_+	hypothetical protein	NA	NA	NA	NA
WP_153987355.1\|524499_524691_+	hypothetical protein	NA	NA	NA	NA
WP_162010197.1\|525070_525397_+	hypothetical protein	NA	NA	NA	NA
WP_153987357.1\|525936_526623_-	hypothetical protein	NA	NA	NA	NA
WP_153987358.1\|526619_526829_-	hypothetical protein	NA	NA	NA	NA
WP_153987359.1\|526825_527272_-	hypothetical protein	NA	NA	NA	NA
WP_153987360.1\|527277_527901_-	hypothetical protein	NA	NA	NA	NA
WP_153987361.1\|528186_528699_-	hypothetical protein	NA	NA	NA	NA
WP_153987362.1\|528729_528906_-	hypothetical protein	NA	NA	NA	NA
WP_153987363.1\|528981_529167_+	hypothetical protein	NA	NA	NA	NA
WP_153987364.1\|529242_529515_+	hypothetical protein	NA	NA	NA	NA
WP_153987365.1\|529956_531039_+	hypothetical protein	NA	NA	NA	NA
WP_162010198.1\|531152_533591_+	Helicase associated domain protein	NA	NA	NA	NA
WP_153987367.1\|533587_535006_+	ParB N-terminal domain-containing protein	A0A1B1INV8	uncultured_Mediterranean_phage	9.9e-28	26.6
WP_153987368.1\|535384_535672_+	hypothetical protein	NA	NA	NA	NA
WP_153987369.1\|535856_536291_+	hypothetical protein	NA	NA	NA	NA
WP_153987370.1\|536468_536693_+	hypothetical protein	NA	NA	NA	NA
WP_153987371.1\|536741_537140_+	hypothetical protein	NA	NA	NA	NA
WP_153987372.1\|537448_537958_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_162010199.1\|537951_538341_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

546279 : 608540

Brevibacillus_phage(12.5%)

integrase,transposase

attL 545717:545731|attR 580545:580559

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
545717:545731	attL	NA	NA	NA	NA
WP_153987380.1\|546279_547215_+\|integrase	tyrosine-type recombinase/integrase	S5M9V8	Brevibacillus_phage	5.4e-30	30.5
WP_162010203.1\|547391_547652_-	hypothetical protein	NA	NA	NA	NA
WP_153987382.1\|547648_548269_-	hypothetical protein	NA	NA	NA	NA
WP_153987383.1\|548314_548602_+	hypothetical protein	NA	NA	NA	NA
WP_153987384.1\|548657_548855_+	hypothetical protein	NA	NA	NA	NA
WP_153987385.1\|548908_549463_+	hypothetical protein	NA	NA	NA	NA
WP_153987386.1\|549829_551299_-	hypothetical protein	NA	NA	NA	NA
WP_153987387.1\|551524_551857_+	hypothetical protein	NA	NA	NA	NA
WP_153987388.1\|551832_552456_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_153987389.1\|552452_552845_-	hypothetical protein	NA	NA	NA	NA
WP_153987390.1\|552841_553051_-	hypothetical protein	NA	NA	NA	NA
WP_153987391.1\|553425_553563_+	hypothetical protein	NA	NA	NA	NA
WP_153987392.1\|553574_554834_-	hypothetical protein	NA	NA	NA	NA
WP_153987393.1\|555106_555409_+	hypothetical protein	NA	NA	NA	NA
WP_153987394.1\|555353_556826_+	recombinase family protein	D2IZV7	Enterococcus_phage	1.1e-08	24.1
WP_153987395.1\|556862_558527_+	recombinase family protein	NA	NA	NA	NA
WP_153987396.1\|558595_560566_+	recombinase family protein	NA	NA	NA	NA
WP_153987397.1\|561056_561425_+	DUF1257 domain-containing protein	NA	NA	NA	NA
WP_153987398.1\|561421_561616_+	DUF2997 domain-containing protein	NA	NA	NA	NA
WP_153987399.1\|561699_563190_+	AAA family ATPase	U5XJW0	Phormidium_phage	3.5e-47	28.8
WP_153987400.1\|563275_563530_+	hypothetical protein	NA	NA	NA	NA
WP_153987305.1\|563545_563767_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153987306.1\|563920_564367_+	hypothetical protein	NA	NA	NA	NA
WP_153987307.1\|564486_565437_+	hypothetical protein	NA	NA	NA	NA
WP_153987308.1\|565452_565695_+	hypothetical protein	NA	NA	NA	NA
WP_153987401.1\|565746_566145_+	hypothetical protein	NA	NA	NA	NA
WP_153987402.1\|566229_566442_+	hypothetical protein	NA	NA	NA	NA
WP_153987403.1\|566448_566712_+	hypothetical protein	NA	NA	NA	NA
WP_153987404.1\|566711_567848_+	hypothetical protein	NA	NA	NA	NA
WP_153987405.1\|569307_569598_+	hypothetical protein	NA	NA	NA	NA
WP_153991474.1\|569607_569781_+	hypothetical protein	A0A2P1CGF5	Mycobacterium_phage	5.2e-08	61.2
WP_153987406.1\|570034_570973_-	hypothetical protein	NA	NA	NA	NA
WP_153987407.1\|571249_571714_-	hypothetical protein	NA	NA	NA	NA
WP_153987408.1\|571710_572850_-	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	6.3e-17	25.8
WP_153987409.1\|572887_576115_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_153987410.1\|576050_576665_-	hypothetical protein	NA	NA	NA	NA
WP_153987411.1\|576634_579640_-	site-specific DNA-methyltransferase	A0A2K5B255	Erysipelothrix_phage	2.8e-27	26.3
WP_153991475.1\|579657_582525_-	DEAD/DEAH box helicase	A0A2H4J643	uncultured_Caudovirales_phage	8.7e-265	48.8
580545:580559	attR	NA	NA	NA	NA
WP_153987412.1\|584260_584848_+	hypothetical protein	NA	NA	NA	NA
WP_153987413.1\|585004_585601_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.6e-11	29.1
WP_153987414.1\|585657_585864_-\|transposase	transposase	NA	NA	NA	NA
WP_153987415.1\|586341_595395_+	hypothetical protein	NA	NA	NA	NA
WP_153987416.1\|595448_602969_+	hypothetical protein	NA	NA	NA	NA
WP_153987417.1\|603562_604042_+	hypothetical protein	NA	NA	NA	NA
WP_162010204.1\|604038_604188_-\|transposase	transposase	NA	NA	NA	NA
WP_153987418.1\|604269_604413_-	hypothetical protein	NA	NA	NA	NA
WP_153987419.1\|604612_604888_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_153987420.1\|604999_605185_-\|transposase	transposase	NA	NA	NA	NA
WP_153987421.1\|606285_607218_+	hypothetical protein	NA	NA	NA	NA
WP_153987422.1\|607417_607612_-	hypothetical protein	NA	NA	NA	NA
WP_162010205.1\|607805_608540_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

620708 : 686421

Paenibacillus_phage(42.86%)

integrase,transposase

attL 619730:619745|attR 641666:641681

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
619730:619745	attL	NA	NA	NA	NA
WP_153987433.1\|620708_621599_+\|integrase	phage integrase SAM-like domain-containing protein	NA	NA	NA	NA
WP_162010208.1\|621642_622233_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153987435.1\|622316_626579_+	hypothetical protein	NA	NA	NA	NA
WP_153987436.1\|626620_626992_-	Hint domain-containing protein	A0A2K9VC86	Lactobacillus_phage	9.0e-05	39.2
WP_153987437.1\|627092_627974_-	immunity 49 family protein	NA	NA	NA	NA
WP_153987438.1\|627996_650952_-	hypothetical protein	NA	NA	NA	NA
641666:641681	attR	NA	NA	NA	NA
WP_153987439.1\|651792_652953_+	hypothetical protein	NA	NA	NA	NA
WP_153987440.1\|653159_653840_+	hypothetical protein	NA	NA	NA	NA
WP_153987441.1\|654633_655401_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153987442.1\|655604_656564_+	hypothetical protein	NA	NA	NA	NA
WP_153987332.1\|656764_657208_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153987331.1\|657204_657900_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_162010209.1\|657927_658596_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153987444.1\|658619_658766_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-09	54.2
WP_153987445.1\|658921_659248_+	hypothetical protein	NA	NA	NA	NA
WP_153987446.1\|659260_659491_+	hypothetical protein	NA	NA	NA	NA
WP_153987447.1\|659649_660537_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_174241908.1\|661105_661489_-\|transposase	transposase	NA	NA	NA	NA
WP_153987449.1\|661494_661884_-\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	7.9e-12	38.4
WP_153987450.1\|661977_662118_+	hypothetical protein	NA	NA	NA	NA
WP_162010210.1\|662143_662467_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_153987452.1\|662575_662947_+	hypothetical protein	NA	NA	NA	NA
WP_174241909.1\|663092_663287_+	hypothetical protein	NA	NA	NA	NA
WP_153987453.1\|664864_665026_-	hypothetical protein	NA	NA	NA	NA
WP_153987454.1\|665242_665392_+	hypothetical protein	NA	NA	NA	NA
WP_153987455.1\|665561_666329_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_153991478.1\|666361_667234_-	ectoine hydroxylase	NA	NA	NA	NA
WP_153987456.1\|667334_667718_-	ectoine synthase	NA	NA	NA	NA
WP_153991479.1\|667831_669094_-	diaminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	8.9e-20	25.7
WP_153991480.1\|669145_669619_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA
WP_153991481.1\|669894_671382_+	sodium/proline symporter	NA	NA	NA	NA
WP_162010211.1\|671625_672615_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153987458.1\|672969_673374_-	bifunctional nuclease family protein	NA	NA	NA	NA
WP_153987459.1\|673694_674078_-\|transposase	transposase	NA	NA	NA	NA
WP_153987460.1\|674083_674473_-\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	5.7e-10	36.6
WP_153987461.1\|674530_675022_-	DsrE family protein	NA	NA	NA	NA
WP_153987462.1\|675137_676325_-	hypothetical protein	NA	NA	NA	NA
WP_153987463.1\|676708_677506_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_153991482.1\|677558_678104_-	DUF3124 domain-containing protein	NA	NA	NA	NA
WP_153987464.1\|678593_681014_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153987465.1\|681142_681391_+	DUF3302 domain-containing protein	NA	NA	NA	NA
WP_153987466.1\|681387_682515_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_162010212.1\|682593_683145_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153988178.1\|683054_683432_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-23	43.9
WP_153987469.1\|684741_685398_-	hypothetical protein	NA	NA	NA	NA
WP_153987470.1\|685583_685961_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.7e-23	43.9
WP_162010213.1\|685870_686215_+\|transposase	transposase	NA	NA	NA	NA
WP_162010214.1\|686211_686421_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

860795 : 871590

Acidithiobacillus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153987106.1\|860795_861296_+\|transposase	transposase	NA	NA	NA	NA
WP_153987107.1\|861286_862165_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.6e-20	47.2
WP_162010228.1\|862112_862736_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_162010229.1\|862645_863023_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.3e-23	45.0
WP_153987580.1\|863259_868395_-	hypothetical protein	NA	NA	NA	NA
WP_153987581.1\|870133_871099_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	4.0e-20	47.2
WP_153987106.1\|871089_871590_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

875190 : 910811

uncultured_Mediterranean_phage(22.22%)

transposase,integrase,tRNA

attL 887342:887401|attR 899055:899213

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153987585.1\|875190_876054_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153987586.1\|876707_879536_+	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	7.7e-173	44.9
WP_153987587.1\|879712_882016_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_153987588.1\|882181_883252_+	ribonucleotide-diphosphate reductase subunit beta	U5Q1G6	Bacillus_phage	3.0e-29	26.9
WP_153987589.1\|883626_885129_+	TolC family protein	NA	NA	NA	NA
WP_153987590.1\|885306_886053_+	AAA family ATPase	Q8JL10	Natrialba_phage	2.0e-11	31.8
WP_153987591.1\|886045_887101_+	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	8.5e-16	34.3
887342:887401	attL	NA	NA	NA	NA
WP_153987592.1\|887500_888688_+\|integrase	tyrosine-type recombinase/integrase	A0A1B1IUW9	uncultured_Mediterranean_phage	1.4e-38	30.6
WP_162010232.1\|890225_890615_+\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	7.9e-12	38.4
WP_162010233.1\|890554_891004_+\|transposase	transposase	NA	NA	NA	NA
WP_153987595.1\|891110_892505_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	7.6e-89	38.1
WP_153987596.1\|892684_892981_+	hypothetical protein	NA	NA	NA	NA
WP_153987597.1\|892987_894601_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_153987598.1\|895297_896182_-	hypothetical protein	NA	NA	NA	NA
WP_153987599.1\|896244_896697_-	hypothetical protein	NA	NA	NA	NA
WP_153987592.1\|897767_898955_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1IUW9	uncultured_Mediterranean_phage	1.4e-38	30.6
WP_153987600.1\|899249_900782_+	hypothetical protein	NA	NA	NA	NA
899055:899213	attR	NA	NA	NA	NA
WP_162010234.1\|901133_902105_-	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_153987602.1\|902212_902695_-	TIGR03067 domain-containing protein	NA	NA	NA	NA
WP_153987603.1\|902863_903190_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_153987604.1\|903286_904171_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_153987605.1\|904557_904926_+	hypothetical protein	NA	NA	NA	NA
WP_153987606.1\|905246_905624_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_153987607.1\|905776_906448_+	isochorismatase family protein	NA	NA	NA	NA
WP_153987608.1\|906459_907011_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_162010235.1\|907007_907136_+	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA
WP_153987610.1\|907110_907593_+	amidohydrolase family protein	NA	NA	NA	NA
WP_153991491.1\|908304_909321_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_153987611.1\|909712_909883_-	hypothetical protein	NA	NA	NA	NA
WP_153987612.1\|910008_910398_+\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	1.1e-10	36.6
WP_162010236.1\|910337_910811_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1663241 : 1729784

Cyanophage(14.29%)

integrase,protease,transposase

attL 1683822:1683876|attR 1730062:1730116

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153988137.1\|1663241_1663751_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_153988138.1\|1663747_1664686_+	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	5.9e-37	32.4
WP_153988139.1\|1664812_1666909_-	elongation factor G	A0A1S5SF82	Streptococcus_phage	8.6e-52	25.2
WP_153988140.1\|1667237_1667960_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_153988141.1\|1668141_1668771_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_153988142.1\|1669131_1669695_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_153988143.1\|1669967_1671542_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_153988144.1\|1671883_1672111_+	hypothetical protein	NA	NA	NA	NA
WP_153988145.1\|1672149_1675074_+	hypothetical protein	NA	NA	NA	NA
WP_162010296.1\|1675024_1675669_-	FHA domain-containing protein	NA	NA	NA	NA
WP_153988147.1\|1676528_1678673_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_153988148.1\|1678752_1679700_-	serine acetyltransferase	NA	NA	NA	NA
WP_153988149.1\|1680000_1680240_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA
WP_153988150.1\|1680236_1680683_-	ribonuclease P protein component	NA	NA	NA	NA
WP_153988151.1\|1680729_1680891_+	hypothetical protein	NA	NA	NA	NA
WP_153988152.1\|1680905_1681916_-	DnaJ domain-containing protein	A0A1V0SF83	Hokovirus	9.9e-14	31.3
WP_162010297.1\|1682302_1683103_+	glucose 1-dehydrogenase	F2NZ40	Diadromus_pulchellus_ascovirus	1.9e-23	34.1
WP_153988154.1\|1683126_1683567_-	acyl-CoA thioesterase	NA	NA	NA	NA
1683822:1683876	attL	NA	NA	NA	NA
WP_153988155.1\|1684063_1685305_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_153988156.1\|1685307_1687503_+	hypothetical protein	NA	NA	NA	NA
WP_153988157.1\|1687743_1688037_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153988158.1\|1688578_1691239_+	hypothetical protein	NA	NA	NA	NA
WP_153987348.1\|1691423_1692263_+	hypothetical protein	NA	NA	NA	NA
WP_153988159.1\|1692722_1693610_+	hypothetical protein	NA	NA	NA	NA
WP_153988160.1\|1694342_1694714_+	hypothetical protein	NA	NA	NA	NA
WP_153988161.1\|1694695_1695988_+	hypothetical protein	NA	NA	NA	NA
WP_153988162.1\|1695984_1707513_+	hypothetical protein	NA	NA	NA	NA
WP_153988163.1\|1707710_1713560_+	hypothetical protein	NA	NA	NA	NA
WP_153988164.1\|1713643_1714843_+	hypothetical protein	NA	NA	NA	NA
WP_153988165.1\|1714802_1715369_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_162010298.1\|1715453_1716128_+	hypothetical protein	NA	NA	NA	NA
WP_153988167.1\|1716140_1716644_+	hypothetical protein	NA	NA	NA	NA
WP_153988168.1\|1716711_1717794_+	hypothetical protein	NA	NA	NA	NA
WP_153988169.1\|1717851_1718067_+\|transposase	transposase	NA	NA	NA	NA
WP_153988170.1\|1718126_1720229_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_174241911.1\|1720381_1720765_-\|transposase	transposase	NA	NA	NA	NA
WP_153988172.1\|1720770_1721160_-\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	2.0e-10	36.6
WP_153988173.1\|1721274_1721766_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153987106.1\|1721871_1722372_+\|transposase	transposase	NA	NA	NA	NA
WP_153988174.1\|1722362_1723487_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	4.6e-20	47.2
WP_153988176.1\|1723797_1728555_-	hypothetical protein	NA	NA	NA	NA
WP_162010214.1\|1728946_1729156_-\|transposase	transposase	NA	NA	NA	NA
WP_162010299.1\|1729152_1729497_-\|transposase	transposase	NA	NA	NA	NA
WP_153988178.1\|1729406_1729784_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-23	43.9
1730062:1730116	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3265313 : 3329945

Mycobacterium_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153989227.1\|3265313_3266348_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_153989228.1\|3266384_3267587_-	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	7.9e-10	23.9
WP_162010378.1\|3267843_3268287_-	hypothetical protein	NA	NA	NA	NA
WP_162010379.1\|3268390_3271354_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_162010380.1\|3271532_3272816_-	glycosyltransferase family 1 protein	Q2NP60	Hyphantria_cunea_nuclear_polyhedrosis_virus	3.7e-05	29.9
WP_153989232.1\|3273123_3273723_-	hypothetical protein	NA	NA	NA	NA
WP_153987452.1\|3275390_3275762_-	hypothetical protein	NA	NA	NA	NA
WP_162010210.1\|3275870_3276194_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_153987450.1\|3276219_3276360_-	hypothetical protein	NA	NA	NA	NA
WP_153989233.1\|3276453_3276843_+\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	9.7e-10	36.6
WP_153987955.1\|3276848_3277232_+\|transposase	transposase	NA	NA	NA	NA
WP_162010381.1\|3277718_3277985_+\|transposase	transposase	NA	NA	NA	NA
WP_153989235.1\|3277967_3278780_-\|transposase	transposase	K4ICS3	Acidithiobacillus_phage	5.3e-18	42.1
WP_153989236.1\|3280106_3281342_-	DNA topoisomerase IV subunit A	NA	NA	NA	NA
WP_153989237.1\|3281334_3283320_-	DNA topoisomerase VI subunit B	NA	NA	NA	NA
WP_153989238.1\|3284281_3284713_+	hypothetical protein	NA	NA	NA	NA
WP_153989239.1\|3284842_3285262_+	hypothetical protein	NA	NA	NA	NA
WP_153989240.1\|3285525_3286557_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_153989241.1\|3286631_3287693_+	nucleoside hydrolase	NA	NA	NA	NA
WP_153989242.1\|3287689_3288643_+	ribokinase	NA	NA	NA	NA
WP_153991605.1\|3288821_3289664_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_153989243.1\|3289660_3291214_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-12	31.6
WP_153989244.1\|3291242_3292307_+	ABC transporter permease	NA	NA	NA	NA
WP_153989245.1\|3292349_3293375_+	nucleoside hydrolase	NA	NA	NA	NA
WP_153989246.1\|3293382_3294405_+	nucleoside hydrolase	NA	NA	NA	NA
WP_153989247.1\|3294500_3295565_+	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_153989248.1\|3295561_3298102_+	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_153991606.1\|3298123_3298507_+	hypothetical protein	NA	NA	NA	NA
WP_153989249.1\|3298506_3299151_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_153989250.1\|3299155_3300295_+	c-type cytochrome	NA	NA	NA	NA
WP_153989251.1\|3300328_3301000_-	HAD-IIB family hydrolase	NA	NA	NA	NA
WP_153989252.1\|3301095_3303045_-	aconitate hydratase	NA	NA	NA	NA
WP_153989253.1\|3303431_3303932_+	hypothetical protein	NA	NA	NA	NA
WP_153989254.1\|3304120_3305758_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153989255.1\|3305772_3307209_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153989256.1\|3307310_3311354_-	general secretion pathway protein GspD	NA	NA	NA	NA
WP_153989257.1\|3311972_3312833_+	hypothetical protein	NA	NA	NA	NA
WP_153989258.1\|3313309_3314092_+	ABC transporter permease	NA	NA	NA	NA
WP_153989259.1\|3314175_3314988_+	ATP-binding cassette domain-containing protein	M1H3A1	Paramecium_bursaria_Chlorella_virus	3.0e-05	25.6
WP_153989260.1\|3314984_3317015_-	protein kinase	A0A0U2U263	Niemeyer_virus	1.1e-11	25.9
WP_153989261.1\|3320033_3321425_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_153989262.1\|3321529_3323968_-	DUF1549 domain-containing protein	NA	NA	NA	NA
WP_153989263.1\|3324455_3325865_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153989264.1\|3325940_3327488_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153991607.1\|3327542_3329063_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153987106.1\|3329444_3329945_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_10

3641589 : 3651074

uncultured_marine_virus(33.33%)

portal,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153989484.1\|3641589_3643422_-	hypothetical protein	A0A0F7L9V3	uncultured_marine_virus	6.4e-11	25.6
WP_153989485.1\|3643434_3643722_-	hypothetical protein	NA	NA	NA	NA
WP_153989486.1\|3643745_3644159_-	hypothetical protein	D7NW62	Streptomyces_phage	2.5e-16	40.8
WP_153989487.1\|3644219_3644636_-	hypothetical protein	NA	NA	NA	NA
WP_153989488.1\|3644687_3645086_-	hypothetical protein	NA	NA	NA	NA
WP_153989489.1\|3645104_3645512_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_153989490.1\|3645512_3645992_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_153989491.1\|3645984_3646353_-\|head	phage head closure protein	A6M954	Geobacillus_virus	7.3e-07	29.6
WP_153989492.1\|3646364_3647348_-	hypothetical protein	A0A0F7L790	uncultured_marine_virus	5.6e-54	38.2
WP_153989493.1\|3647420_3648149_-	hypothetical protein	NA	NA	NA	NA
WP_153989494.1\|3648229_3649510_-	signal peptide peptidase SppA	G8DCP1	Silicibacter_phage	1.5e-19	33.1
WP_153989495.1\|3649502_3651074_-\|portal	phage portal protein	A0A088C529	Shewanella_sp._phage	1.9e-11	19.9

DBSCAN-SWA_11

3865192 : 3977305

Tetraselmis_virus(18.18%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153987106.1\|3865192_3865693_+\|transposase	transposase	NA	NA	NA	NA
WP_153987107.1\|3865683_3866562_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.6e-20	47.2
WP_162010405.1\|3866832_3868239_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	3.6e-30	26.5
WP_153989652.1\|3868296_3869724_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153989653.1\|3869760_3874050_-	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153989654.1\|3874360_3874918_+	hypothetical protein	NA	NA	NA	NA
WP_153989655.1\|3875164_3876127_+	SDR family NAD(P)-dependent oxidoreductase	A0A2K9L4U8	Tupanvirus	5.8e-72	46.6
WP_162010406.1\|3876289_3876772_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_162010407.1\|3877184_3877424_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_162010408.1\|3877529_3877805_+	hypothetical protein	NA	NA	NA	NA
WP_153989658.1\|3878154_3879927_-	VWA domain-containing protein	NA	NA	NA	NA
WP_153989659.1\|3880519_3884011_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_153988178.1\|3884243_3884621_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-23	43.9
WP_162010409.1\|3884530_3885082_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153989661.1\|3885163_3885403_+	hypothetical protein	NA	NA	NA	NA
WP_162010410.1\|3885415_3885529_+\|transposase	transposase	NA	NA	NA	NA
WP_153991632.1\|3885587_3886892_-	flavohemoglobin expression-modulating QEGLA motif protein	NA	NA	NA	NA
WP_153989662.1\|3887157_3888411_-	hypothetical protein	NA	NA	NA	NA
WP_153989663.1\|3888435_3888975_-	hypothetical protein	NA	NA	NA	NA
WP_153991633.1\|3889306_3890476_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_153989664.1\|3890623_3891013_-	immunity 22 family protein	NA	NA	NA	NA
WP_153989665.1\|3891061_3891511_-	immunity 22 family protein	NA	NA	NA	NA
WP_153991634.1\|3891714_3893358_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153991635.1\|3893561_3894800_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_162010411.1\|3896053_3921643_+	DUF4347 domain-containing protein	E3SSU6	Prochlorococcus_phage	5.8e-09	29.6
WP_153991636.1\|3921721_3923404_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_153989667.1\|3923758_3925147_+	hypothetical protein	NA	NA	NA	NA
WP_153989668.1\|3925151_3926057_-	FAD-dependent thymidylate synthase	A0A0N7KVT4	Yellowstone_lake_phycodnavirus	4.1e-59	55.8
WP_153989669.1\|3926171_3929090_-	hypothetical protein	NA	NA	NA	NA
WP_153989670.1\|3929217_3930576_-	hypothetical protein	NA	NA	NA	NA
WP_153989671.1\|3931290_3932997_+	hypothetical protein	NA	NA	NA	NA
WP_153989672.1\|3933140_3934493_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	4.4e-41	31.2
WP_153989673.1\|3935038_3935437_+	hypothetical protein	NA	NA	NA	NA
WP_153989674.1\|3935513_3936017_-	DUF1569 domain-containing protein	NA	NA	NA	NA
WP_153991637.1\|3936161_3938837_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.2e-100	35.2
WP_153989675.1\|3939987_3940923_+	hypothetical protein	NA	NA	NA	NA
WP_153989676.1\|3941013_3943383_-	DUF4340 domain-containing protein	NA	NA	NA	NA
WP_153989677.1\|3943483_3946657_-	Gldg family protein	NA	NA	NA	NA
WP_153991638.1\|3946842_3947574_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.7e-23	27.2
WP_153989678.1\|3948247_3949054_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_153989679.1\|3949141_3950482_-	FAD-binding protein	NA	NA	NA	NA
WP_153989680.1\|3950697_3952116_+	HD domain-containing protein	A0A2K9L0X9	Tupanvirus	2.0e-20	29.3
WP_153989681.1\|3952307_3955829_+	FG-GAP repeat protein	NA	NA	NA	NA
WP_153989682.1\|3956093_3959612_+	FG-GAP repeat protein	NA	NA	NA	NA
WP_153989683.1\|3959861_3963440_+	hypothetical protein	NA	NA	NA	NA
WP_153989684.1\|3963442_3964204_-	hypothetical protein	A0A292GAJ3	Xanthomonas_phage	1.4e-20	30.8
WP_153989685.1\|3964322_3965555_-	glutamate dehydrogenase	NA	NA	NA	NA
WP_153989686.1\|3966067_3969046_+	protein kinase	NA	NA	NA	NA
WP_153989687.1\|3969202_3971116_+	hypothetical protein	NA	NA	NA	NA
WP_153989688.1\|3971360_3972236_+	hypothetical protein	NA	NA	NA	NA
WP_153989689.1\|3972248_3973550_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_153989690.1\|3973651_3975592_-	DUF1549 domain-containing protein	NA	NA	NA	NA
WP_153989691.1\|3975889_3977305_+\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_12

5026075 : 5165068

102

Acidithiobacillus_phage(17.65%)

transposase,integrase,tRNA

attL 5097859:5097873|attR 5147580:5147594

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153990424.1\|5026075_5027089_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_153990425.1\|5027081_5027615_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_153990426.1\|5027716_5028070_-	hypothetical protein	NA	NA	NA	NA
WP_153990427.1\|5029134_5030550_+	magnesium chelatase	NA	NA	NA	NA
WP_153990428.1\|5030714_5032412_+	hypothetical protein	NA	NA	NA	NA
WP_153990429.1\|5032660_5034421_+	hypothetical protein	NA	NA	NA	NA
WP_153990430.1\|5034691_5036146_+	sigma 54-interacting transcriptional regulator	W8CYM9	Bacillus_phage	4.9e-06	27.3
WP_153990431.1\|5036218_5040244_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	6.9e-58	31.4
WP_153990432.1\|5040569_5040824_+	hypothetical protein	NA	NA	NA	NA
WP_153990433.1\|5040956_5041973_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	4.1e-60	38.6
WP_153990434.1\|5042041_5043646_-	sulfotransferase	NA	NA	NA	NA
WP_153990435.1\|5043724_5044600_-	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_153990436.1\|5044653_5044944_-	hypothetical protein	NA	NA	NA	NA
WP_153990437.1\|5045007_5045742_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_174241930.1\|5045851_5046301_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_153990439.1\|5046488_5047646_-	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA
WP_153990440.1\|5048043_5048664_-	hypothetical protein	NA	NA	NA	NA
WP_153990441.1\|5048812_5049628_-	glucose 1-dehydrogenase	F2NZ40	Diadromus_pulchellus_ascovirus	9.8e-12	28.9
WP_153990442.1\|5049999_5052723_+	glucosidase	NA	NA	NA	NA
WP_153990443.1\|5052807_5053164_+	hypothetical protein	NA	NA	NA	NA
WP_153990444.1\|5053200_5055123_-	DUF4214 domain-containing protein	NA	NA	NA	NA
WP_153990445.1\|5055501_5056557_+	Ldh family oxidoreductase	NA	NA	NA	NA
WP_153990446.1\|5057251_5059429_+	hypothetical protein	NA	NA	NA	NA
WP_162010473.1\|5059762_5060515_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_153990448.1\|5060630_5061269_+	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_153990449.1\|5061368_5061743_-	immunity 22 family protein	NA	NA	NA	NA
WP_153990450.1\|5061857_5062751_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_153990451.1\|5063043_5063961_+	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_153988178.1\|5064574_5064952_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-23	43.9
WP_162010409.1\|5064861_5065413_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153990452.1\|5065438_5065963_+	hypothetical protein	NA	NA	NA	NA
WP_153987440.1\|5066756_5067437_-	hypothetical protein	NA	NA	NA	NA
WP_153990453.1\|5067643_5068780_-	hypothetical protein	NA	NA	NA	NA
WP_153990454.1\|5069122_5075332_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153990455.1\|5075654_5080112_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153990456.1\|5080394_5086592_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153990457.1\|5086944_5087106_+	hypothetical protein	NA	NA	NA	NA
WP_153987288.1\|5087548_5088019_+	hypothetical protein	NA	NA	NA	NA
WP_153987107.1\|5088055_5088934_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	3.6e-20	47.2
WP_153987106.1\|5088924_5089425_-\|transposase	transposase	NA	NA	NA	NA
WP_153990458.1\|5089667_5090726_-	FAD-dependent oxidoreductase	A0A2I2L5E1	Orpheovirus	1.6e-70	44.9
WP_153990459.1\|5091018_5092923_+	carbon starvation protein A	NA	NA	NA	NA
WP_153991676.1\|5092973_5093333_+	four helix bundle protein	NA	NA	NA	NA
WP_153990460.1\|5093657_5095295_+	hypothetical protein	NA	NA	NA	NA
WP_153990461.1\|5095576_5096536_-	UbiA family prenyltransferase	NA	NA	NA	NA
WP_153990462.1\|5096539_5096749_-	hypothetical protein	NA	NA	NA	NA
WP_162010474.1\|5096805_5097915_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
5097859:5097873	attL	NA	NA	NA	NA
WP_153990464.1\|5098136_5099474_-	AAA family ATPase	NA	NA	NA	NA
WP_153990465.1\|5100177_5100663_+	hypothetical protein	NA	NA	NA	NA
WP_153990466.1\|5100699_5101053_+	hypothetical protein	NA	NA	NA	NA
WP_153990467.1\|5101082_5101715_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_162010475.1\|5102049_5102523_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153990469.1\|5102462_5102852_-\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	8.8e-11	37.5
WP_162010476.1\|5103244_5103427_+	hypothetical protein	NA	NA	NA	NA
WP_162010477.1\|5103631_5103919_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153991677.1\|5103949_5105173_+\|integrase	tyrosine-type recombinase/integrase	Q7Y5X7	Haemophilus_phage	9.2e-06	25.7
WP_153990471.1\|5105708_5106830_-	M24 family metallopeptidase	NA	NA	NA	NA
WP_153990472.1\|5107331_5109467_+	hypothetical protein	NA	NA	NA	NA
WP_153990473.1\|5109476_5110208_+	glycosyltransferase	NA	NA	NA	NA
WP_153990474.1\|5110204_5110606_+	DUF2304 family protein	NA	NA	NA	NA
WP_153990475.1\|5110694_5111666_+	hypothetical protein	NA	NA	NA	NA
WP_153990476.1\|5111795_5112755_+	hypothetical protein	NA	NA	NA	NA
WP_162010478.1\|5113031_5113676_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_153990478.1\|5113675_5114101_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_153990479.1\|5114105_5114558_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_162010479.1\|5114559_5117082_+	hypothetical protein	NA	NA	NA	NA
WP_153990481.1\|5117118_5117748_+	hypothetical protein	NA	NA	NA	NA
WP_153990482.1\|5117766_5118243_-	hypothetical protein	NA	NA	NA	NA
WP_153990483.1\|5118414_5120556_-	hypothetical protein	NA	NA	NA	NA
WP_153990484.1\|5121009_5122884_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_153990485.1\|5122883_5123804_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_153990486.1\|5123858_5125016_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_153990487.1\|5125020_5126031_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	5.3e-15	31.9
WP_153991678.1\|5126068_5127088_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.4e-17	31.0
WP_153990488.1\|5127134_5127620_-	hypothetical protein	NA	NA	NA	NA
WP_153990489.1\|5127771_5129358_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153990490.1\|5129457_5130828_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_153990491.1\|5131009_5133568_-	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153990492.1\|5133863_5138003_-	FG-GAP repeat protein	NA	NA	NA	NA
WP_153990493.1\|5138305_5140747_-	hypothetical protein	NA	NA	NA	NA
WP_153990494.1\|5141586_5143974_+	hypothetical protein	NA	NA	NA	NA
WP_153991679.1\|5145257_5146811_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_153991680.1\|5146886_5149016_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	4.7e-106	36.4
5147580:5147594	attR	NA	NA	NA	NA
WP_153990495.1\|5149187_5149961_+	UvrB/UvrC motif-containing protein	NA	NA	NA	NA
WP_162010481.1\|5150444_5150666_+	carbon storage regulator	H2BD56	Pseudomonas_phage	8.2e-06	41.4
WP_153990497.1\|5151565_5152084_-	hypothetical protein	K4ICS3	Acidithiobacillus_phage	3.0e-06	39.8
WP_153990498.1\|5152121_5152436_-\|transposase	transposase	NA	NA	NA	NA
WP_153990499.1\|5152537_5153284_+	hypothetical protein	NA	NA	NA	NA
WP_162010482.1\|5153317_5153650_+	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_153990501.1\|5153799_5154480_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	5.3e-19	35.8
WP_153990502.1\|5154476_5155550_+	FAD binding domain-containing protein	NA	NA	NA	NA
WP_153990503.1\|5155682_5157926_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_153990504.1\|5157976_5159158_+	XdhC family protein	NA	NA	NA	NA
WP_153990505.1\|5159154_5159781_+	NTP transferase domain-containing protein	NA	NA	NA	NA
WP_153990506.1\|5159973_5160759_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_162010483.1\|5160988_5161945_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_153990508.1\|5162078_5162669_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_162010484.1\|5162736_5163372_-\|transposase	transposase	K4I1H9	Acidithiobacillus_phage	5.8e-20	50.0
WP_162010485.1\|5163337_5163616_-	hypothetical protein	NA	NA	NA	NA
WP_153987106.1\|5163606_5164107_-\|transposase	transposase	NA	NA	NA	NA
WP_162010486.1\|5164106_5164781_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_162010290.1\|5164690_5165068_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	9.7e-23	43.1

DBSCAN-SWA_13

5532993 : 5602300

Acidithiobacillus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153990733.1\|5532993_5533881_+\|transposase	transposase	K4ICS3	Acidithiobacillus_phage	3.6e-20	44.4
WP_153989995.1\|5534035_5534821_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_153990734.1\|5535044_5536340_-	glucose-1-phosphate adenylyltransferase	A0A291LA53	Escherichia_phage	4.4e-06	29.1
WP_153990735.1\|5536872_5537658_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_153990736.1\|5538218_5540135_+	hypothetical protein	NA	NA	NA	NA
WP_153990737.1\|5540247_5540844_+	nitroreductase family protein	NA	NA	NA	NA
WP_153990738.1\|5540938_5542177_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_153990739.1\|5542438_5542678_-	acyl carrier protein	A0A1P8VWH3	Flavobacterium_phage	1.2e-05	40.8
WP_153990740.1\|5543187_5543958_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
WP_153990741.1\|5544049_5544961_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_153990742.1\|5545255_5546251_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_153990743.1\|5546257_5546437_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_162010502.1\|5546905_5549698_-	VCBS repeat-containing protein	NA	NA	NA	NA
WP_153990745.1\|5550044_5550473_-	hypothetical protein	NA	NA	NA	NA
WP_153990746.1\|5550572_5552630_-	hypothetical protein	NA	NA	NA	NA
WP_153991691.1\|5552722_5554177_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153990747.1\|5554500_5556057_+	sulfatase-like hydrolase/transferase	A0A1V0SA98	Catovirus	4.4e-21	22.3
WP_153990748.1\|5556119_5557478_+	sugar porter family MFS transporter	NA	NA	NA	NA
WP_153990749.1\|5557592_5558369_-	nucleotidyltransferase domain-containing protein	K4K696	Caulobacter_phage	1.5e-09	36.5
WP_153990750.1\|5558457_5559453_-	nucleotidyltransferase domain-containing protein	G3M9V9	Bacillus_virus	4.8e-21	28.7
WP_153990751.1\|5559626_5560898_-	MFS transporter	NA	NA	NA	NA
WP_153990752.1\|5561857_5562226_+	DUF1257 domain-containing protein	NA	NA	NA	NA
WP_153990753.1\|5562222_5562417_+	DUF2997 domain-containing protein	NA	NA	NA	NA
WP_153990754.1\|5562501_5563992_+	AAA family ATPase	U5XJW0	Phormidium_phage	1.2e-47	29.0
WP_153990755.1\|5564089_5565034_+	hypothetical protein	NA	NA	NA	NA
WP_153990756.1\|5565044_5565233_+	hypothetical protein	NA	NA	NA	NA
WP_153987106.1\|5565232_5565733_+\|transposase	transposase	NA	NA	NA	NA
WP_153990757.1\|5565723_5566842_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	4.6e-20	47.2
WP_153990758.1\|5566902_5567301_+	hypothetical protein	NA	NA	NA	NA
WP_153990759.1\|5567383_5567602_+	hypothetical protein	NA	NA	NA	NA
WP_153990760.1\|5567662_5567836_+	hypothetical protein	NA	NA	NA	NA
WP_153990761.1\|5567954_5569280_-	FG-GAP repeat protein	NA	NA	NA	NA
WP_153990762.1\|5569276_5571331_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_153990763.1\|5571363_5574330_-	hypothetical protein	NA	NA	NA	NA
WP_153987285.1\|5574347_5574530_-	hypothetical protein	NA	NA	NA	NA
WP_153990764.1\|5574872_5576009_+	hypothetical protein	NA	NA	NA	NA
WP_153987440.1\|5576215_5576896_+	hypothetical protein	NA	NA	NA	NA
WP_153990765.1\|5577684_5578374_-	hypothetical protein	NA	NA	NA	NA
WP_162010503.1\|5579083_5580214_+	hypothetical protein	NA	NA	NA	NA
WP_153991692.1\|5583243_5583540_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_153990767.1\|5583559_5585263_-	type I-MYXAN CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_153990768.1\|5585238_5585967_-	type I-MYXAN CRISPR-associated protein Cas5/Cmx5/DevS	NA	NA	NA	NA
WP_153990769.1\|5585970_5586927_-	type I-B CRISPR-associated protein Cas7/Cst2/DevR	NA	NA	NA	NA
WP_153990770.1\|5586978_5588697_-	type I-MYXAN CRISPR-associated protein Cmx8	NA	NA	NA	NA
WP_153990771.1\|5588666_5591063_-	CRISPR-associated helicase Cas3'	A0A2R2ZGW0	Clostridioides_phage	5.4e-10	21.9
WP_153990772.1\|5591059_5591683_-	type I-MYXAN CRISPR-associated protein Cas6/Cmx6	NA	NA	NA	NA
WP_162010504.1\|5591699_5592119_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_153990774.1\|5592450_5593452_-	WYL domain-containing protein	NA	NA	NA	NA
WP_153990775.1\|5594016_5595987_+	recombinase family protein	NA	NA	NA	NA
WP_153990776.1\|5596475_5596844_+	DUF1257 domain-containing protein	NA	NA	NA	NA
WP_153990777.1\|5596840_5597035_+	DUF2997 domain-containing protein	NA	NA	NA	NA
WP_153990778.1\|5597118_5598609_+	AAA family ATPase	U5XJW0	Phormidium_phage	2.5e-45	28.0
WP_153990779.1\|5598694_5598949_+	hypothetical protein	NA	NA	NA	NA
WP_153990780.1\|5599213_5600164_+	hypothetical protein	NA	NA	NA	NA
WP_153990781.1\|5600179_5600422_+	hypothetical protein	NA	NA	NA	NA
WP_153990782.1\|5600448_5600973_+	hypothetical protein	NA	NA	NA	NA
WP_153987251.1\|5600884_5602300_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_14

5845837 : 5878293

Klosneuvirus(25.0%)

protease,plate,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153990936.1\|5845837_5847493_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_153990937.1\|5848260_5849403_+	DUF2183 domain-containing protein	NA	NA	NA	NA
WP_153990938.1\|5849519_5850968_+\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_153990939.1\|5850997_5851603_+	carbonic anhydrase	NA	NA	NA	NA
WP_153990940.1\|5851622_5853611_-\|tRNA	arginine--tRNA ligase	A0A1V0SIS8	Klosneuvirus	1.4e-64	30.7
WP_153990941.1\|5853827_5856440_-	protein kinase	A0A1E1EXF7	Acanthamoeba_castellanii_mimivirus	5.0e-17	31.0
WP_153990942.1\|5856796_5858407_-	response regulator	NA	NA	NA	NA
WP_153990943.1\|5858855_5859929_-	protein kinase	Q67624	IC4_retrovirus	4.9e-19	33.3
WP_153990944.1\|5860348_5860939_-	RNAase	NA	NA	NA	NA
WP_153990945.1\|5861022_5862924_-	hypothetical protein	NA	NA	NA	NA
WP_153990946.1\|5862940_5863582_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_153990947.1\|5863578_5865045_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_153990948.1\|5865523_5867182_-	hypothetical protein	NA	NA	NA	NA
WP_153990949.1\|5867537_5867921_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_153990950.1\|5867960_5869067_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_162010521.1\|5869095_5870448_+	radical SAM protein	NA	NA	NA	NA
WP_162010522.1\|5870472_5871123_-	hypothetical protein	NA	NA	NA	NA
WP_153990953.1\|5871250_5873944_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	6.0e-90	32.0
WP_153990954.1\|5874027_5874570_-	hypothetical protein	NA	NA	NA	NA
WP_153990955.1\|5874677_5875979_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_153990956.1\|5875942_5877805_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_153990957.1\|5877807_5878293_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_15

6230598 : 6308823

uncultured_Mediterranean_phage(28.57%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153987331.1\|6230598_6231294_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153987332.1\|6231290_6231734_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153991188.1\|6232522_6233791_+	hypothetical protein	NA	NA	NA	NA
WP_153991189.1\|6233956_6234340_+	CoA-binding protein	NA	NA	NA	NA
WP_153991190.1\|6234362_6235796_-	hypothetical protein	NA	NA	NA	NA
WP_153991191.1\|6236326_6236545_+	hypothetical protein	NA	NA	NA	NA
WP_153991192.1\|6236724_6239133_-	hypothetical protein	NA	NA	NA	NA
WP_153991193.1\|6239283_6240210_-	DUF3473 domain-containing protein	NA	NA	NA	NA
WP_153991194.1\|6240283_6240994_-	exosortase-associated EpsI family protein	NA	NA	NA	NA
WP_162010543.1\|6241554_6244788_-	protein translocase subunit SecD	A0A1B1IVP7	uncultured_Mediterranean_phage	4.0e-24	32.6
WP_153991195.1\|6244928_6245333_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_153991196.1\|6245426_6245585_+	hypothetical protein	NA	NA	NA	NA
WP_153991726.1\|6245756_6246869_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.5e-87	47.4
WP_153991197.1\|6247292_6248621_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_153991198.1\|6248844_6252126_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	3.1e-56	22.2
WP_162010544.1\|6252138_6253806_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_153991200.1\|6254611_6255493_-	recombinase RecA	NA	NA	NA	NA
WP_153991201.1\|6255606_6256710_-	alanine racemase	NA	NA	NA	NA
WP_162010545.1\|6257227_6257977_+	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_153991203.1\|6258017_6259733_+	DNA polymerase/3'-5' exonuclease PolX	A0A0H3TLZ4	Faustovirus	1.5e-14	26.6
WP_153991204.1\|6259932_6260382_-	FG-GAP repeat protein	NA	NA	NA	NA
WP_153991205.1\|6260452_6260938_-	hypothetical protein	NA	NA	NA	NA
WP_153991206.1\|6260874_6261237_-	hypothetical protein	NA	NA	NA	NA
WP_162010546.1\|6261662_6262484_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_174241907.1\|6263365_6263749_-\|transposase	transposase	NA	NA	NA	NA
WP_153991208.1\|6263754_6264177_-\|transposase	transposase	A0A0M5M147	Mycobacterium_phage	1.9e-11	37.5
WP_153991209.1\|6264224_6264620_-	hypothetical protein	NA	NA	NA	NA
WP_153991210.1\|6264808_6265459_-	PH domain-containing protein	NA	NA	NA	NA
WP_153991211.1\|6265991_6266462_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_153991212.1\|6266793_6268716_+	cation:proton antiporter	NA	NA	NA	NA
WP_162010547.1\|6268734_6269544_-	thioredoxin family protein	NA	NA	NA	NA
WP_153991214.1\|6269842_6270751_+	TIM barrel protein	NA	NA	NA	NA
WP_153991728.1\|6271095_6271581_+	hypothetical protein	NA	NA	NA	NA
WP_153991215.1\|6271772_6274919_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_153991216.1\|6275197_6276115_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_153991217.1\|6276251_6276662_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_153991218.1\|6276674_6278780_+	hypothetical protein	NA	NA	NA	NA
WP_153991219.1\|6279096_6279309_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_153991220.1\|6279457_6279736_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_153991221.1\|6280011_6280218_-	hypothetical protein	NA	NA	NA	NA
WP_153991222.1\|6280334_6281156_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_153987331.1\|6282826_6283522_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_153987332.1\|6283518_6283962_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153991223.1\|6284042_6285488_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_153991224.1\|6285552_6288483_-	DUF1553 domain-containing protein	NA	NA	NA	NA
WP_153991225.1\|6288631_6290212_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_153991226.1\|6290311_6291757_-	MFS transporter	NA	NA	NA	NA
WP_153991227.1\|6292112_6292550_+	hypothetical protein	NA	NA	NA	NA
WP_153991228.1\|6292741_6294244_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_153991229.1\|6294259_6297433_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	5.9e-89	24.7
WP_153991230.1\|6298599_6299922_+	DUF1552 domain-containing protein	NA	NA	NA	NA
WP_162010548.1\|6299992_6302461_+	DUF1592 domain-containing protein	NA	NA	NA	NA
WP_153991232.1\|6302557_6302917_-	hypothetical protein	NA	NA	NA	NA
WP_153991233.1\|6303490_6304102_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_162010549.1\|6304436_6306968_+	protein kinase	A0A1E1EXF7	Acanthamoeba_castellanii_mimivirus	6.5e-22	28.7
WP_153991235.1\|6307003_6307810_+	hypothetical protein	NA	NA	NA	NA
WP_153987106.1\|6308322_6308823_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043547

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection