CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045954	Salmonella enterica subsp. enterica serovar Saintpaul strain AUSMDU00010531 chromosome, complete genome	4 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	0	26	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045954_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045954_1

597760-597860

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045954_1

>merge|NZ_CP045954|1|597760-597860|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP045954|1|1|597760-597860|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045954.1\|WP_000802069.1\|594967_595852_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP045954.1\|WP_000908562.1\|604566_605070_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP045954.1\|WP_010723222.1\|595957_596038_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP045954.1\|WP_000884721.1\|604048_604573_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP045954.1\|WP_000133064.1\|587816_590495_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP045954.1\|WP_001040200.1\|590715_591117_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP045954.1\|WP_001670767.1\|592722_594858_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP045954.1\|WP_000059465.1\|592211_592481_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP045954.1\|WP_000224394.1\|598073_599318_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP045954.1\|WP_001031038.1\|586289_587792_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP045954.1\|WP_000532745.1\|600067_600787_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP045954.1\|WP_014343907.1\|601949_602846_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP045954.1\|WP_000130437.1\|600764_601772_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP045954.1\|WP_001294027.1\|599378_599909_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045954.1\|WP_000380404.1\|605411_605855_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP045954.1\|WP_000207648.1\|583838_585182_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP045954.1\|WP_000421309.1\|602836_603832_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP045954.1\|WP_000089668.1\|591116_592061_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP045954.1\|WP_000105461.1\|585809_586262_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP045954.1\|WP_000928379.1\|605056_605374_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979

Protein	Function_ID	Function_description	E-value
NZ_CP045954.1\|WP_000802069.1\|594967_595852_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP045954.1\|WP_000908562.1\|604566_605070_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP045954.1\|WP_010723222.1\|595957_596038_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP045954.1\|WP_000884721.1\|604048_604573_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP045954.1\|WP_000133064.1\|587816_590495_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP045954.1\|WP_001040200.1\|590715_591117_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	9.5207e-53
NZ_CP045954.1\|WP_001670767.1\|592722_594858_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP045954.1\|WP_000059465.1\|592211_592481_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP045954.1\|WP_000224394.1\|598073_599318_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP045954.1\|WP_001031038.1\|586289_587792_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP045954.1\|WP_000532745.1\|600067_600787_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.17265e-108
NZ_CP045954.1\|WP_014343907.1\|601949_602846_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP045954.1\|WP_000130437.1\|600764_601772_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP045954.1\|WP_000380404.1\|605411_605855_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.36854e-99
NZ_CP045954.1\|WP_000207648.1\|583838_585182_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP045954.1\|WP_000421309.1\|602836_603832_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP045954.1\|WP_000089668.1\|591116_592061_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP045954.1\|WP_000105461.1\|585809_586262_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP045954.1\|WP_000928379.1\|605056_605374_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44

>NZ_CP045954.1|WP_010723222.1|595957_596038_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP045954.1|WP_000802069.1|594967_595852_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP045954.1|WP_001670767.1|592722_594858_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP045954.1|WP_000059465.1|592211_592481_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP045954.1|WP_000089668.1|591116_592061_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITIYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP045954.1|WP_001040200.1|590715_591117_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDQDEAAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP045954.1|WP_000133064.1|587816_590495_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP045954.1|WP_001031038.1|586289_587792_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP045954.1|WP_000105461.1|585809_586262_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP045954.1|WP_000207648.1|583838_585182_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKGK
>NZ_CP045954.1|WP_000224394.1|598073_599318_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFVFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ
>NZ_CP045954.1|WP_001294027.1|599378_599909_-|hypothetical-protein
MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQIVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI
>NZ_CP045954.1|WP_000532745.1|600067_600787_+|murein-L,D-transpeptidase
MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTTLP
>NZ_CP045954.1|WP_000130437.1|600764_601772_-|LLM-class-flavin-dependent-oxidoreductase
MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEQIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFRSPSEQYGVQQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMDVKEELLG
>NZ_CP045954.1|WP_014343907.1|601949_602846_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP045954.1|WP_000421309.1|602836_603832_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP045954.1|WP_000884721.1|604048_604573_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP045954.1|WP_000908562.1|604566_605070_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP045954.1|WP_000928379.1|605056_605374_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP045954.1|WP_000380404.1|605411_605855_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

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Crispr_ID: NZ_CP045954_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045954_2

946853-948467

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

26 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP045954_2

>merge|NZ_CP045954|2|946853-948467|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCAACAGCGTCCCGTATTCTGTATCGTTGACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGAAGCCATCAAATCAAAAACAAAATTATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGTAGCGAATTGCCCGCTGTATCGTGTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTTTGATATCCACTGCCCACCGGTGGGGATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAATTAATAACAGAAAATAAATAGCGAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGACGCTGCCGTCCCCCCGCTCGACGCTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCGGGAAAACGTCCAAGTGCCCATATCCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTCAGAACATGCGCGGTATTATTTTTGACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTGGAAAGAACCAGAACGCTGGATATTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACCACATCAATGACCACATCACGCAGATATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCGTGTTTACTTCAATAGCGACGTTGTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGTTGACCATCGTCAGCTTCATAAAGATTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGTTATTGAGTGGGAAAAAATCGTAAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCTCTATAGCCATTAGGTGCGCCACCACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCTCTCTAACGACTTCCCCGGAGTACGTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTGTCGGCGTTGCTCACGTGACTATTTCGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATAATTTATAAATTTTCGTCCACTCATCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACCGTTATCTGCTGGTTGATACTTCCCCGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCAGAACGCCGCATCGCCGAACTGGACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCCGGTTTATCTGCTCCGGACCAATCGACTAGTGTTCCCCGCGCCAGCGGAGATAAACCGCGCCGCCAGCTGGAAAAATGCCGCCTGTTAATGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCAGCCGACGCATTCGCTTGATCGCTTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCTGGACCTCGATTTATTTAATACGTTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCCAACTCGTCAGGGCGGTTATCCAGCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGCGCCGGGATATTGCGCCGCGCCGAGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCACGAGGTCTGACGCGGATGTGATGAGTTAGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP045954|2|1|946853-948406|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACAGCGTCCCGTATTCTGTATCGTTGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGAAGCCATCAAATCAAAAACAAAATTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGTAGCGAATTGCCCGCTGTATCGTGTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTGATATCCACTGCCCACCGGTGGGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATTAATAACAGAAAATAAATAGCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGACGCTGCCGTCCCCCCGCTCGACGCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCGGGAAAACGTCCAAGTGCCCATATCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCAGAACATGCGCGGTATTATTTTTGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGAAAGAACCAGAACGCTGGATATTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCACATCAATGACCACATCACGCAGATATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGTGTTTACTTCAATAGCGACGTTGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGTTGACCATCGTCAGCTTCATAAAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTATTGAGTGGGAAAAAATCGTAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCTCTATAGCCATTAGGTGCGCCACCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCTCTCTAACGACTTCCCCGGAGTACGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGTCGGCGTTGCTCACGTGACTATTTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAATTTATAAATTTTCGTCCACTCATCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGTTATCTGCTGGTTGATACTTCCCCGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCAGAACGCCGCATCGCCGAACTGGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCGGTTTATCTGCTCCGGACCAATCGACTA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	CGCCGCCAGCTGGAAAAATGCCGCCTGTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCCGACGCATTCGCTTGATCGCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCTGGACCTCGATTTATTTAATACGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCAACTCGTCAGGGCGGTTATCCAGCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP045954|2|2|946853-948467|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACAGCGTCCCGTATTCTGTATCGTTGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGAAGCCATCAAATCAAAAACAAAATTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGTAGCGAATTGCCCGCTGTATCGTGTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTGATATCCACTGCCCACCGGTGGGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATTAATAACAGAAAATAAATAGCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGACGCTGCCGTCCCCCCGCTCGACGCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCGGGAAAACGTCCAAGTGCCCATATCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCAGAACATGCGCGGTATTATTTTTGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGAAAGAACCAGAACGCTGGATATTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCACATCAATGACCACATCACGCAGATATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGTGTTTACTTCAATAGCGACGTTGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGTTGACCATCGTCAGCTTCATAAAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTATTGAGTGGGAAAAAATCGTAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCTCTATAGCCATTAGGTGCGCCACCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCTCTCTAACGACTTCCCCGGAGTACGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGTCGGCGTTGCTCACGTGACTATTTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAATTTATAAATTTTCGTCCACTCATCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGTTATCTGCTGGTTGATACTTCCCCGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCAGAACGCCGCATCGCCGAACTGGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCGGTTTATCTGCTCCGGACCAATCGACTA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	CGCCGCCAGCTGGAAAAATGCCGCCTGTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCCGACGCATTCGCTTGATCGCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCTGGACCTCGATTTATTTAATACGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCAACTCGTCAGGGCGGTTATCCAGCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCACGAGGTCTGACGCGGATGTGATGAGTTA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP045954|2|1|946853-948467|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACAGCGTCCCGTATTCTGTATCGTTGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGAAGCCATCAAATCAAAAACAAAATTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGTAGCGAATTGCCCGCTGTATCGTGTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTGATATCCACTGCCCACCGGTGGGGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATTAATAACAGAAAATAAATAGCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGACGCTGCCGTCCCCCCGCTCGACGCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCGGGAAAACGTCCAAGTGCCCATATCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCAGAACATGCGCGGTATTATTTTTGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGAAAGAACCAGAACGCTGGATATTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCACATCAATGACCACATCACGCAGATATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGTGTTTACTTCAATAGCGACGTTGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGTTGACCATCGTCAGCTTCATAAAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTATTGAGTGGGAAAAAATCGTAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCTCTATAGCCATTAGGTGCGCCACCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCTCTCTAACGACTTCCCCGGAGTACGTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGTCGGCGTTGCTCACGTGACTATTTCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAATTTATAAATTTTCGTCCACTCATCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGTTATCTGCTGGTTGATACTTCCCCGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCAGAACGCCGCATCGCCGAACTGGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCGGTTTATCTGCTCCGGACCAATCGACTA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	CGCCGCCAGCTGGAAAAATGCCGCCTGTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCCGACGCATTCGCTTGATCGCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCTGGACCTCGATTTATTTAATACGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCAACTCGTCAGGGCGGTTATCCAGCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCACGAGGTCTGACGCGGATGTGATGAGTTA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045954.1\|WP_000117946.1\|960397_960958_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045954.1\|WP_000368583.1\|958841_960401_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP045954.1\|WP_001199961.1\|945884_946556_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP045954.1\|WP_000706479.1\|932649_933792_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP045954.1\|WP_000226838.1\|937996_940231_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP045954.1\|WP_001145544.1\|954769_955723_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP045954.1\|WP_000206419.1\|960971_962030_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP045954.1\|WP_001290659.1\|952034_953747_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP045954.1\|WP_000036734.1\|944450_945749_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP045954.1\|WP_000210863.1\|942730_944368_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP045954.1\|WP_000210905.1\|950235_952035_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP045954.1\|WP_000108313.1\|949449_949812_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP045954.1\|WP_000080394.1\|953822_954557_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045954.1\|WP_000046849.1\|936649_937945_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP045954.1\|WP_000029745.1\|956166_958830_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP045954.1\|WP_000186400.1\|933835_936592_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP045954.1\|WP_001532579.1\|940636_940933_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP045954.1\|WP_000210449.1\|941702_942503_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP045954.1\|WP_000480218.1\|940314_940671_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP045954.1\|WP_001207999.1\|948564_949362_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
NZ_CP045954.1\|WP_000117946.1\|960397_960958_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP045954.1\|WP_000368583.1\|958841_960401_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	4.67184e-174
NZ_CP045954.1\|WP_001199961.1\|945884_946556_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP045954.1\|WP_000706479.1\|932649_933792_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP045954.1\|WP_000226838.1\|937996_940231_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP045954.1\|WP_001145544.1\|954769_955723_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP045954.1\|WP_000206419.1\|960971_962030_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.30149e-132
NZ_CP045954.1\|WP_001290659.1\|952034_953747_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP045954.1\|WP_000036734.1\|944450_945749_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP045954.1\|WP_000210863.1\|942730_944368_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP045954.1\|WP_000210905.1\|950235_952035_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP045954.1\|WP_000108313.1\|949449_949812_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP045954.1\|WP_000080394.1\|953822_954557_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40417e-137
NZ_CP045954.1\|WP_000046849.1\|936649_937945_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP045954.1\|WP_000029745.1\|956166_958830_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP045954.1\|WP_000186400.1\|933835_936592_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP045954.1\|WP_001532579.1\|940636_940933_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
NZ_CP045954.1\|WP_000210449.1\|941702_942503_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP045954.1\|WP_000480218.1\|940314_940671_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP045954.1\|WP_001207999.1\|948564_949362_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	7.74954e-103

>NZ_CP045954.1|WP_001199961.1|945884_946556_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP045954.1|WP_000036734.1|944450_945749_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP045954.1|WP_000210863.1|942730_944368_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP045954.1|WP_000210449.1|941702_942503_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP045954.1|WP_001532579.1|940636_940933_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP045954.1|WP_000480218.1|940314_940671_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP045954.1|WP_000226838.1|937996_940231_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP045954.1|WP_000046849.1|936649_937945_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP045954.1|WP_000186400.1|933835_936592_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP045954.1|WP_000706479.1|932649_933792_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP045954.1|WP_001207999.1|948564_949362_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGKNFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIVNIVRHCQNITGIKRIYALIGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP045954.1|WP_000108313.1|949449_949812_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP045954.1|WP_000210905.1|950235_952035_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSEALLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>NZ_CP045954.1|WP_001290659.1|952034_953747_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP045954.1|WP_000080394.1|953822_954557_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRTDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP045954.1|WP_001145544.1|954769_955723_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP045954.1|WP_000029745.1|956166_958830_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP045954.1|WP_000368583.1|958841_960401_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP045954.1|WP_000117946.1|960397_960958_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP045954.1|WP_000206419.1|960971_962030_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKEDLTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP045954_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045954_3

964726-965547

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

13 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP045954_3

>merge|NZ_CP045954|3|964726-965547|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCCAGGGGTTCAGGATTTCGGATATTGCTGACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGACGCCTCTTTTTTCTGTACCTTTTGCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCACCTGGCGCCAGAAATATTCATGGTAATCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGCTAACAGAAACATAGCTGATAGTTGGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTGCAGGACTGACCGTTACTGCCAGACCAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACGGTGGAATATTGCAGCAAAATCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTACTTTCGATACCAATAAGGACCGGATTACGTGTTCCCCGCGCCAGCGGGGATAAACCGTATAATTGGCGTCCATATATCTGGATATTTACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCGGGAACGTGGGATGATGCCAGGACCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGTCGAGGAGGGGCGGGCGATCACTGAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCCACAGTCTGGTTGTGTTGTTGGACGACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACGGCGCTCGTTTCAGCGGCAACGGCTGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGCACAACGCCTGGATATCCGCCCATCGGCCGTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP045954|3|2|964726-965546|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCCAGGGGTTCAGGATTTCGGATATTGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGACGCCTCTTTTTTCTGTACCTTTTGCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCACCTGGCGCCAGAAATATTCATGGTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGGCTAACAGAAACATAGCTGATAGTTGGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTGCAGGACTGACCGTTACTGCCAGACCAGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCACGGTGGAATATTGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGTACTTTCGATACCAATAAGGACCGGATTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTATAATTGGCGTCCATATATCTGGATATTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGCGGGAACGTGGGATGATGCCAGGACCATC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGTCGAGGAGGGGCGGGCGATCACTGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGCCACAGTCTGGTTGTGTTGTTGGACGACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAACGGCGCTCGTTTCAGCGGCAACGGCTGTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGTCAGCGGGGATAAACA

>NZ_CP045954|3|3|964726-965547|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCAGGGGTTCAGGATTTCGGATATTGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGCCTCTTTTTTCTGTACCTTTTGCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCTGGCGCCAGAAATATTCATGGTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCTAACAGAAACATAGCTGATAGTTGGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCAGGACTGACCGTTACTGCCAGACCAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACGGTGGAATATTGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTACTTTCGATACCAATAAGGACCGGATTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATAATTGGCGTCCATATATCTGGATATTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCGGGAACGTGGGATGATGCCAGGACCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCGAGGAGGGGCGGGCGATCACTGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCACAGTCTGGTTGTGTTGTTGGACGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGCGCTCGTTTCAGCGGCAACGGCTGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP045954|3|2|964726-965547|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCAGGGGTTCAGGATTTCGGATATTGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGCCTCTTTTTTCTGTACCTTTTGCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCTGGCGCCAGAAATATTCATGGTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCTAACAGAAACATAGCTGATAGTTGGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCAGGACTGACCGTTACTGCCAGACCAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACGGTGGAATATTGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTACTTTCGATACCAATAAGGACCGGATTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATAATTGGCGTCCATATATCTGGATATTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCGGGAACGTGGGATGATGCCAGGACCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCGAGGAGGGGCGGGCGATCACTGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCACAGTCTGGTTGTGTTGTTGGACGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGCGCTCGTTTCAGCGGCAACGGCTGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045954.1\|WP_000490483.1\|965561_966608_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP045954.1\|WP_000741643.1\|970702_971413_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP045954.1\|WP_000117946.1\|960397_960958_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045954.1\|WP_000206419.1\|960971_962030_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP045954.1\|WP_000080394.1\|953822_954557_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045954.1\|WP_000517480.1\|970372_970684_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP045954.1\|WP_001518648.1\|964335_964629_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP045954.1\|WP_001092267.1\|967776_969216_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP045954.1\|WP_000144830.1\|963415_964336_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP045954.1\|WP_000372384.1\|966858_967767_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP045954.1\|WP_000029745.1\|956166_958830_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP045954.1\|WP_001221538.1\|972918_973680_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP045954.1\|WP_001219244.1\|971412_971892_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP045954.1\|WP_000134246.1\|971888_972938_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP045954.1\|WP_000281483.1\|962768_963419_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP045954.1\|WP_000368583.1\|958841_960401_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP045954.1\|WP_001118109.1\|969825_970182_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP045954.1\|WP_001145544.1\|954769_955723_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP045954.1\|WP_000085112.1\|962040_962787_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP045954.1\|WP_001173663.1\|969202_969808_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661

Protein	Function_ID	Function_description	E-value
NZ_CP045954.1\|WP_000490483.1\|965561_966608_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP045954.1\|WP_000741643.1\|970702_971413_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	7.75163e-119
NZ_CP045954.1\|WP_000117946.1\|960397_960958_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP045954.1\|WP_000206419.1\|960971_962030_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.30149e-132
NZ_CP045954.1\|WP_000080394.1\|953822_954557_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40417e-137
NZ_CP045954.1\|WP_000517480.1\|970372_970684_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP045954.1\|WP_001518648.1\|964335_964629_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP045954.1\|WP_001092267.1\|967776_969216_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP045954.1\|WP_000144830.1\|963415_964336_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.63116e-157
NZ_CP045954.1\|WP_000372384.1\|966858_967767_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP045954.1\|WP_000029745.1\|956166_958830_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP045954.1\|WP_001221538.1\|972918_973680_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP045954.1\|WP_001219244.1\|971412_971892_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP045954.1\|WP_000134246.1\|971888_972938_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP045954.1\|WP_000281483.1\|962768_963419_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	7.7595e-75
NZ_CP045954.1\|WP_000368583.1\|958841_960401_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	4.67184e-174
NZ_CP045954.1\|WP_001118109.1\|969825_970182_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP045954.1\|WP_001145544.1\|954769_955723_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP045954.1\|WP_000085112.1\|962040_962787_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	6.76499e-48
NZ_CP045954.1\|WP_001173663.1\|969202_969808_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146

>NZ_CP045954.1|WP_001518648.1|964335_964629_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP045954.1|WP_000144830.1|963415_964336_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP045954.1|WP_000281483.1|962768_963419_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASTIFDVQTRPFAPMLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALEWLARQGEQNGFTLREASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINEPALFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP045954.1|WP_000085112.1|962040_962787_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP045954.1|WP_000206419.1|960971_962030_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKEDLTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP045954.1|WP_000117946.1|960397_960958_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP045954.1|WP_000368583.1|958841_960401_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP045954.1|WP_000029745.1|956166_958830_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP045954.1|WP_001145544.1|954769_955723_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP045954.1|WP_000080394.1|953822_954557_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRTDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP045954.1|WP_000490483.1|965561_966608_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALVIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP045954.1|WP_000372384.1|966858_967767_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP045954.1|WP_001092267.1|967776_969216_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKNRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP045954.1|WP_001173663.1|969202_969808_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP045954.1|WP_001118109.1|969825_970182_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP045954.1|WP_000517480.1|970372_970684_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP045954.1|WP_000741643.1|970702_971413_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQISVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLLDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP045954.1|WP_001219244.1|971412_971892_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP045954.1|WP_000134246.1|971888_972938_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP045954.1|WP_001221538.1|972918_973680_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP045954_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045954_4

1156168-1156277

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045954_4

>merge|NZ_CP045954|4|1156168-1156277|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTTAATCAAATTCTCTAAGGTGGGACGCTGTAACCCTCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTAA

>NZ_CP045954|4|4|1156168-1156277|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTTAA	TCAAATTCTCTAAGGTGGGACGCTGTAACCCTCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045954.1\|WP_000248794.1\|1160227_1161421_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376935
NZ_CP045954.1\|WP_000480483.1\|1152123_1152645_-\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP045954.1\|WP_000701821.1\|1158399_1158615_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP045954.1\|WP_010989065.1\|1153136_1153493_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP045954.1\|WP_010989057.1\|1164296_1165460_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP045954.1\|WP_001098983.1\|1150775_1151756_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP045954.1\|WP_001542208.1\|1162631_1163696_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NZ_CP045954.1\|WP_001033832.1\|1149751_1150765_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP045954.1\|WP_000749979.1\|1152757_1153042_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957
NZ_CP045954.1\|WP_010989064.1\|1153645_1154464_-\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NZ_CP045954.1\|WP_001520831.1\|1154508_1155792_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226459
NZ_CP045954.1\|WP_001542209.1\|1162450_1162618_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP045954.1\|WP_000533858.1\|1167644_1169054_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP045954.1\|WP_000889012.1\|1148254_1149457_-\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
NZ_CP045954.1\|WP_001520307.1\|1156294_1158364_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP045954.1\|WP_001161781.1\|1159065_1159893_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045954.1\|WP_000196159.1\|1165467_1167648_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
NZ_CP045954.1\|WP_000776032.1\|1147545_1148181_+\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NZ_CP045954.1\|WP_010989063.1\|1161810_1162404_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045954.1\|WP_000973738.1\|1151752_1152127_-\|PTS-sorbitol-transporter	unknown	unknown	gnl\|CDD\|226254

Protein	Function_ID	Function_description	E-value
NZ_CP045954.1\|WP_000248794.1\|1160227_1161421_-\|hypothetical-protein	gnl\|CDD\|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	3.20348e-07
NZ_CP045954.1\|WP_000480483.1\|1152123_1152645_-\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
NZ_CP045954.1\|WP_000701821.1\|1158399_1158615_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
NZ_CP045954.1\|WP_010989065.1\|1153136_1153493_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09
NZ_CP045954.1\|WP_010989057.1\|1164296_1165460_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.18004e-97
NZ_CP045954.1\|WP_001098983.1\|1150775_1151756_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	8.92733e-179
NZ_CP045954.1\|WP_001542208.1\|1162631_1163696_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.47537e-117
NZ_CP045954.1\|WP_001033832.1\|1149751_1150765_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
NZ_CP045954.1\|WP_000749979.1\|1152757_1153042_-\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38
NZ_CP045954.1\|WP_010989064.1\|1153645_1154464_-\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
NZ_CP045954.1\|WP_001520831.1\|1154508_1155792_-\|AAA-family-ATPase	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	0
NZ_CP045954.1\|WP_001542209.1\|1162450_1162618_-\|hypothetical-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	2.20982e-13
NZ_CP045954.1\|WP_000533858.1\|1167644_1169054_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	5.87074e-128
NZ_CP045954.1\|WP_000889012.1\|1148254_1149457_-\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	6.01438e-16
NZ_CP045954.1\|WP_001520307.1\|1156294_1158364_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP045954.1\|WP_000196159.1\|1165467_1167648_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP045954.1\|WP_000776032.1\|1147545_1148181_+\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	4.14833e-98
NZ_CP045954.1\|WP_000973738.1\|1151752_1152127_-\|PTS-sorbitol-transporter	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59

>NZ_CP045954.1|WP_001520831.1|1154508_1155792_-|AAA-family-ATPase
MELRRISVNNLFGILNYDIDLGNSETIIITGPNGYGKTMLLKIIDNILNKNIDFFFDLRFEEIKFELDTILLCIEKQKNKNVAVTVVDYVNDKKRQEVFTLNKNKELDVDYFDEIYNKLLICDNIDSDPILKSYNHEEILNYYKIKKIKLHKEKHHKSDFLDKSIPNAELTFIKAQRIENIKNEKSAIESQANFLLELIKRAAEESAQISQRLDSTFPARLFDSINENISSTSINDRLIGIQRKRELFMKFGIIKSEDTFIPRKFSNATLGKEYSTVLNLYISDALEKLSPYEELFEKINLFVNLLNEKMLAFKEIKISNEHGFYFQSDNGERISLSNLSSGEQNQIVIYFDLIFKAKQNSVILIDEPEISLHVAWQKEFLDSIARIQKLNEFSKIIIATHSPQIVNNNWDITYDLFENNNKNMEGQ
>NZ_CP045954.1|WP_010989064.1|1153645_1154464_-|DUF4435-domain-containing-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>NZ_CP045954.1|WP_010989065.1|1153136_1153493_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>NZ_CP045954.1|WP_000749979.1|1152757_1153042_-|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP045954.1|WP_000480483.1|1152123_1152645_-|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>NZ_CP045954.1|WP_000973738.1|1151752_1152127_-|PTS-sorbitol-transporter
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>NZ_CP045954.1|WP_001098983.1|1150775_1151756_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPEAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP045954.1|WP_001033832.1|1149751_1150765_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>NZ_CP045954.1|WP_000889012.1|1148254_1149457_-|DUF3883-domain-containing-protein
MLEFHNVPLKTILRRAIMSLPTNFNDILRFFEKDYDTAKEDNALSARGQFLQLYPLNHLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDENPLSQMFKAKILSLYFPEHFINICSKDHLKEIAMEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPGDERYIEVKSIGRDGKEGAFRFFLSGNELTVSNLSNHSKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMSPCAYVVRFDLEEPA
>NZ_CP045954.1|WP_000776032.1|1147545_1148181_+|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQHH
>NZ_CP045954.1|WP_001520307.1|1156294_1158364_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>NZ_CP045954.1|WP_000701821.1|1158399_1158615_-|AlpA-family-transcriptional-regulator
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>NZ_CP045954.1|WP_001161781.1|1159065_1159893_+|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>NZ_CP045954.1|WP_000248794.1|1160227_1161421_-|hypothetical-protein
MVNYPYFSVNVLSGSINFVENDKVKLGRNDKCWCKSGLKYKKCHLDRDREMPVSKAEALKFSKSNSQRKACYAPASMHEDCDKRIVQAHTLSKSSSLKAIADSSNHVMGVVMNLPSLIKNNGRWVPEKIGINQASTFTGFCAVHDRILFSCLENEKFTGTDEQCFALMFRSLSKEIYAKEGGRRSSDFAKNADKGKLQAEQVYIQEFVSLHQSGLNAAITELNNLKTSLDRILLNRQFSEIESVVFTFSEPLPIAVSSILSPERDFDGTKIQDLNDLTVSAEQVCFNAFSSEGKGYVVFSWLGTSAIIRRFVRSLIKVQTDRIFNTLLYFFFTKAENTYSSPEWWDSLSDKQRENIGNMIMSGVDFFDNSTLRVDHSVDYNSAALAEIRYSNSEISS
>NZ_CP045954.1|WP_010989063.1|1161810_1162404_-|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>NZ_CP045954.1|WP_001542209.1|1162450_1162618_-|hypothetical-protein
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
>NZ_CP045954.1|WP_001542208.1|1162631_1163696_-|tyrosine-type-recombinase/integrase
MPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
>NZ_CP045954.1|WP_010989057.1|1164296_1165460_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
>NZ_CP045954.1|WP_000196159.1|1165467_1167648_-|type-I-secretion-system-permease/ATPase
MTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
>NZ_CP045954.1|WP_000533858.1|1167644_1169054_-|TolC-family-outer-membrane-protein
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_002638	Salmonella enterica enterica sv Choleraesuis RF-1 plasmid pKDSC50, complete sequence	22033-22064	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_KY401053	Salmonella enterica subsp. enterica serovar Enteritidis strain SE380 plasmid unnamed, complete sequence	108454-108485	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_KX807610	Salmonella enterica subsp. enterica serovar Enteritidis strain CNM4839/03 plasmid pUO-SeVR1, complete sequence	96934-96965	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_KT317612	Salmonella enterica subsp. enterica serovar Enteritidis strain EC20120002 plasmid pSE12-2, complete sequence	5412-5443	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018663	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-2, complete sequence	18476-18507	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP033089	Salmonella enterica subsp. enterica serovar Enteritidis strain SEO plasmid unnamed, complete sequence	35045-35076	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP026054	Salmonella enterica strain FDAARGOS_70 plasmid unnamed2, complete sequence	34987-35018	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP023437	Salmonella enterica strain FORC_074 plasmid pFORC74_2, complete sequence	3595-3626	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP040645	Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-0432 plasmid pCFSAN074386, complete sequence	42980-43011	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP043774	Salmonella enterica strain QH plasmid p1, complete sequence	817-848	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018639	Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-2, complete sequence	38-69	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP025553	Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 plasmid pPIR00558, complete sequence	24430-24461	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_010119	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pOU7519, complete sequence	23910-23941	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018653	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-2, complete sequence	10716-10747	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	HG970000	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 PT4 plasmid pSEN complete sequence	10716-10747	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP026570	Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence	36496-36527	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP017233	Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence	43771-43802	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP009767	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_007 plasmid pFORC7, complete sequence	47455-47486	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	KT317611	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 plasmid pSE9-641, complete sequence	5413-5444	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	KT317613	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 plasmid pSE12-5, complete sequence	5412-5443	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP012397	Salmonella enterica strain FORC_019 plasmid pFORC19, complete sequence	80622-80653	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP015525	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10978 plasmid pSJTUF10978, complete sequence	6973-7004	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_012124	Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 plasmid pSPCV, complete sequence	20730-20761	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP022004	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051873 plasmid pCFSAN051873, complete sequence	42046-42077	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP007508	Salmonella enterica subsp. enterica serovar Enteritidis strain Durban plasmid, complete sequence	20955-20986	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP008927	Salmonella enterica subsp. enterica serovar Enteritidis strain SEJ plasmid unnamed, complete sequence	5412-5443	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP041178	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367B, complete sequence	16624-16655	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050708	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-2, complete sequence	6254-6285	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP015527	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10984 plasmid pSJTUF10984, complete sequence	6973-7004	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP011395	Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 plasmid pCFSAN000006, complete sequence	26460-26491	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP007529	Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 isolate CDC_2010K-0968 plasmid p00, complete sequence	4387-4418	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_006855	Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSCV50, complete sequence	22046-22077	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP012345	Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 plasmid pCFSAN000679_01, complete sequence	20891-20922	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP041972	Salmonella enterica subsp. enterica serovar Enteritidis strain NCCP 16206 plasmid unnamed, complete sequence	42278-42309	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	MN125607	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.1-2C7 plasmid p1.1-2C7, complete sequence	3900-3931	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	MN125608	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence	4034-4065	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	MN125609	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence	4034-4065	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP011943	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence	10716-10747	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP053399	Salmonella enterica subsp. enterica serovar Paratyphi C strain 07-0715 plasmid unnamed, complete sequence	43649-43680	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP020824	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033541 plasmid pCFSAN033541, complete sequence	608-639	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP020826	Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033543 plasmid pCFSAN033543, complete sequence	53879-53910	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP013098	Salmonella enterica subsp. enterica serovar Enteritidis strain CMCC50041 plasmid pCMCC50041, complete sequence	22665-22696	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP032850	Salmonella enterica subsp. enterica serovar Enteritidis strain NCM 61 plasmid pM0061, complete sequence	14480-14511	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050711	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-2, complete sequence	6254-6285	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	LN879484	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSEN-BT, strain D7795	26106-26137	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018660	Salmonella enterica subsp. enterica serovar Enteritidis strain 93-0639 plasmid pSE93-0639, complete sequence	20605-20636	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018641	Salmonella enterica subsp. enterica serovar Enteritidis strain 70-1605 plasmid pSE70-1605, complete sequence	10724-10755	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050725	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-2, complete sequence	6254-6285	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_019120	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSENV, complete sequence	20954-20985	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018636	Salmonella enterica subsp. enterica serovar Enteritidis strain 56-3991 plasmid pSE56-3991, complete sequence	5412-5443	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018634	Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence	52191-52222	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP026714	Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence	29217-29248	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018650	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1607 plasmid pSE81-1607-2, complete sequence	5412-5443	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP030796	Salmonella enterica strain 2017K-0021 plasmid p2017K-0021, complete sequence	28676-28707	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	77241-77272	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050722	Salmonella enterica subsp. enterica serovar Enteritidis strain SE81 plasmid pSE81-1, complete sequence	6254-6285	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050718	Salmonella enterica subsp. enterica serovar Enteritidis strain SE95 plasmid pSE95-2, complete sequence	6254-6285	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP040647	Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-H9654 plasmid pCFSAN074385, complete sequence	35257-35288	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP043434	Salmonella enterica subsp. enterica serovar Enteritidis strain PT1 plasmid pPT1-1, complete sequence	6254-6285	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP025557	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p1PIR00532, complete sequence	37359-37390	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP017178	Salmonella enterica strain FORC_056 plasmid unnamed1, complete sequence	22769-22800	0	1.0
NZ_CP045954_3	3.11\|965364\|33\|NZ_CP045954\|PILER-CR	965364-965396	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	90461-90493	0	1.0
NZ_CP045954_3	3.13\|965486\|33\|NZ_CP045954\|PILER-CR	965486-965518	33	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35344-35376	0	1.0
NZ_CP045954_3	3.24\|965365\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965365-965396	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	90462-90493	0	1.0
NZ_CP045954_3	3.26\|965487\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965487-965518	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35345-35376	0	1.0
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP017620	Salmonella enterica subsp. enterica serovar Typhimurium strain 22792 plasmid unnamed1, complete sequence	17360-17391	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP046282	Salmonella enterica strain FDAARGOS_687 plasmid unnamed1, complete sequence	5282-5313	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP017618	Salmonella enterica subsp. enterica serovar Typhimurium strain 22495 plasmid unnamed1, complete sequence	9686-9717	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP035302	Salmonella enterica subsp. enterica strain ST1539 plasmid pST1539, complete sequence	17072-17103	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP040569	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-8290 plasmid pCFSAN059542, complete sequence	77289-77320	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014980	Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662 plasmid pSTY1-H2662, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014970	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808 isolate ST1126-1 plasmid pSTY1-1808, complete sequence	11000-11031	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014968	Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702 plasmid pSTY1-2011K-1702, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP037873	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS014854 plasmid pPNCS014854_S1, complete sequence	5372-5403	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP037876	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S3, complete sequence	84038-84069	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP020923	Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed1, complete sequence	102825-102856	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014973	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY2-1898, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP038435	Salmonella enterica subsp. enterica serovar Typhimurium strain E40V plasmid unnamed, complete sequence	5372-5403	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014976	Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640 plasmid pSTY1-2009K-1640, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_017054	Salmonella enterica subsp. enterica serovar Typhimurium str. 798 plasmid p798_93, complete sequence	10895-10926	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP047324	Salmonella enterica subsp. enterica serovar Typhimurium strain RM13672 plasmid pRM13672, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014537	Salmonella enterica subsp. enterica serovar Typhimurium strain SO3 isolate SOHS 02-68 plasmid pSO3_STV, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_022570	Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 unnamed plasmid, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039560	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.2, complete sequence	40955-40986	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039577	Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014856 plasmid p10-3857.1, complete sequence	2315-2346	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039586	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014859 plasmid p11-0225.1, complete sequence	41014-41045	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_LN999012	Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 plasmid pSLT, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP034480	Salmonella enterica subsp. enterica serovar Typhimurium strain 14028 plasmid unnamed, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP038433	Salmonella enterica subsp. enterica serovar Typhimurium strain E40 plasmid unnamed, complete sequence	5372-5403	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP016390	Salmonella enterica subsp. enterica serovar Typhimurium strain 13-931 plasmid pSLT931, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP025556	Salmonella enterica subsp. enterica serovar Typhimurium strain PIR00538 plasmid pPIR00538, complete sequence	52215-52246	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050746	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-1, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP053871	Salmonella enterica subsp. enterica serovar Typhimurium strain SS2017 plasmid pSS2017-1, complete sequence	84153-84184	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP053866	Salmonella enterica subsp. enterica serovar Typhimurium strain SL7207 plasmid pSL7202-1, complete sequence	82815-82846	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP041006	Salmonella enterica strain FDAARGOS_768 plasmid unnamed1, complete sequence	1991-2022	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039855	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014864 plasmid p11-0972.1, complete sequence	41027-41058	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP034231	Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 plasmid pATCC14028, complete sequence	56001-56032	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP029594	Salmonella enterica strain DA34827 plasmid pDA34827-94, complete sequence	64762-64793	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP051287	Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Gull_ST-29 plasmid pST29-94038, complete sequence	94186-94217	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP017729	Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 plasmid pSARA13, complete sequence	90052-90083	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP008745	Salmonella enterica subsp. enterica serovar Typhimurium strain VNP20009 plasmid pSLT_VNP20009, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP007582	Salmonella enterica subsp. enterica serovar Typhimurium strain 138736 plasmid, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039566	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014849 plasmid p08-7727.1, complete sequence	40955-40986	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_013437	Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSLT-BT, complete sequence	8039-8070	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP034720	Salmonella enterica subsp. enterica serovar Typhimurium strain RSE04 plasmid pRSE04, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP051281	Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Junco_ST-35 plasmid pST35-99574.1A, complete sequence	17652-17683	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP029596	Salmonella enterica strain DA34833 plasmid pDA34833-94, complete sequence	91595-91626	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP051277	Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Sparrow_ST-87 plasmid pST87-92921, complete sequence	24086-24117	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_LS997974	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pSLT-BT	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	LN794247	Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSBLT, complete sequence	21607-21638	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP041974	Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP 16207 plasmid unnamed1, complete sequence	69020-69051	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039580	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014857 plasmid p10-3881.1, complete sequence	26467-26498	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039583	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014858 plasmid p10-8609.1, complete sequence	41062-41093	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP044969	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS007087.2, complete sequence	39341-39372	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP044959	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.2, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039596	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014865 plasmid p12-4331.1, complete sequence	40955-40986	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039592	Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014862 plasmid p11-0500.1, complete sequence	41072-41103	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP039568	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014850 plasmid p08-8136.1, complete sequence	40955-40986	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP014577	Salmonella enterica subsp. enterica serovar Typhimurium strain RM9437 plasmid pRM9437, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	CP013721	Salmonella enterica subsp. enterica serovar Typhimurium strain RM10607 plasmid pRM10607, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_016864	Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 plasmid pSTUK-100, complete sequence	86638-86669	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014962	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 plasmid pSTY1-1899, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_016861	Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 plasmid pSTMDT12_L, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP021464	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_2, complete sequence	21634-21665	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP029838	Salmonella enterica subsp. enterica serovar Typhimurium strain 10ST07093 plasmid p10ST07093B, complete sequence	60842-60873	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014050	Salmonella enterica strain FDAARGOS_94 plasmid unnamed, complete sequence	47407-47438	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP038848	Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014851 plasmid p09-0499.1, complete sequence	40955-40986	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050736	Salmonella enterica subsp. enterica serovar Typhimurium strain ST90 plasmid pST90-2, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP040565	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7699 plasmid pCFSAN059544, complete sequence	53755-53786	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_003277	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 plasmid pSLT, complete sequence	10996-11027	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP022071	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed1, complete sequence	64647-64678	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP051268	Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Hawk_ST-33 plasmid pST33-93798, complete sequence	84480-84511	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_016855	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S plasmid unnamed, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_LT855377	Salmonella enterica subsp. enterica serovar Typhimurium isolate STMU2UK plasmid 2	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP027413	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_320 plasmid unnamed2, complete sequence	2356-2387	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP027409	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_317 plasmid unnamed, complete sequence	94266-94297	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014359	Salmonella enterica subsp. enterica serovar Typhimurium strain YU15 plasmid pYU15_94, complete sequence	10995-11026	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP015158	Salmonella enterica subsp. enterica serovar Typhimurium strain NC983 plasmid unnamed, complete sequence	10994-11025	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP018658	Salmonella enterica subsp. enterica serovar Enteritidis strain 92-0392 plasmid pSE92-0392, complete sequence	15532-15563	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP028200	Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN018746 plasmid pGMI14-001, complete sequence	52532-52563	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NC_021155	Salmonella enterica subsp. enterica serovar Typhimurium str. U288 plasmid pSTU288-1, complete sequence	29455-29486	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP014357	Salmonella enterica subsp. enterica serovar Typhimurium strain SO2 isolate SOHS 02-20 plasmid pSO2_STV, complete sequence	10994-11025	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP028319	Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067216 plasmid pSC-09-1, complete sequence	17458-17489	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP050741	Salmonella enterica subsp. enterica serovar Typhimurium strain ST56 plasmid pST56-2, complete sequence	6587-6618	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP040901	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP18-6199 plasmid pCFSAN074387, complete sequence	5394-5425	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP040322	Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014879 plasmid p16-6397.1, complete sequence	41063-41094	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP045950	Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010529 plasmid pAUSMDU00010529_01, complete sequence	6599-6630	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP015599	Salmonella enterica strain FORC_030 plasmid pFORC_030, complete sequence	6048-6079	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP026701	Salmonella enterica subsp. enterica serovar Typhimurium strain AR_0031 plasmid unitig_1_pilon, complete sequence	64941-64972	1	0.969
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	KX777254	Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSTV-Mu1, complete sequence	9073-9104	1	0.969
NZ_CP045954_3	3.13\|965486\|33\|NZ_CP045954\|PILER-CR	965486-965518	33	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95163-95195	1	0.97
NZ_CP045954_3	3.13\|965486\|33\|NZ_CP045954\|PILER-CR	965486-965518	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9402-9434	1	0.97
NZ_CP045954_3	3.13\|965486\|33\|NZ_CP045954\|PILER-CR	965486-965518	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39769	1	0.97
NZ_CP045954_3	3.13\|965486\|33\|NZ_CP045954\|PILER-CR	965486-965518	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113375-113407	1	0.97
NZ_CP045954_3	3.26\|965487\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965487-965518	32	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95164-95195	1	0.969
NZ_CP045954_3	3.26\|965487\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965487-965518	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9403-9434	1	0.969
NZ_CP045954_3	3.26\|965487\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965487-965518	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39768	1	0.969
NZ_CP045954_3	3.26\|965487\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965487-965518	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113376-113407	1	0.969
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP010173	Escherichia coli strain H8 plasmid A, complete sequence	43964-43995	2	0.938
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	74371-74402	2	0.938
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP046005	Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence	16994-17025	2	0.938
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	MG592476	Vibrio phage 1.104.O._10N.286.49.A12, partial genome	53386-53417	2	0.938
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	MG592538	Vibrio phage 1.171.O._10N.261.52.F12, partial genome	52140-52171	2	0.938
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	MG592428	Vibrio phage 1.046.O._10N.286.52.E3, partial genome	57590-57621	2	0.938
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	29797-29828	4	0.875
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP021537	Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence	42949-42980	4	0.875
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP026938	Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence	78817-78848	4	0.875
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_MH844525	Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence	28593-28624	4	0.875
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_MH580301	Escherichia coli strain 1107 plasmid p1107-99K, complete sequence	9058-9089	4	0.875
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	12322-12353	4	0.875
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP040893	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence	56847-56878	4	0.875
NZ_CP045954_2	2.17\|947858\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947858-947889	32	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	277890-277921	6	0.812
NZ_CP045954_2	2.20\|948041\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948041-948072	32	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	478474-478505	6	0.812
NZ_CP045954_2	2.20\|948041\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948041-948072	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	716796-716827	6	0.812
NZ_CP045954_2	2.20\|948041\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948041-948072	32	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	633092-633123	6	0.812
NZ_CP045954_2	2.20\|948041\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948041-948072	32	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	493788-493819	6	0.812
NZ_CP045954_2	2.20\|948041\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948041-948072	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	716796-716827	6	0.812
NZ_CP045954_2	2.20\|948041\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948041-948072	32	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	443317-443348	6	0.812
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	MN693125	Marine virus AFVG_25M7, complete genome	40053-40084	7	0.781
NZ_CP045954_2	2.19\|947980\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947980-948011	32	KX657793	Mycobacterium phage DarthPhader, complete genome	27141-27172	7	0.781
NZ_CP045954_2	2.24\|948285\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948285-948316	32	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	213820-213851	7	0.781
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	198251-198282	7	0.781
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	46733-46764	7	0.781
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	6403-6434	7	0.781
NZ_CP045954_3	3.26\|965487\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965487-965518	32	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	270963-270994	7	0.781
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013525	Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence	216863-216894	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013554	Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence	236953-236984	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013588	Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence	212208-212239	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	217056-217087	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	217426-217457	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	217426-217457	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	217421-217452	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013565	Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence	236953-236984	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	217056-217087	8	0.75
NZ_CP045954_2	2.1\|946882\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946882-946913	32	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	223032-223063	8	0.75
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	MG592462	Vibrio phage 1.087.A._10N.261.45.F9, partial genome	45333-45364	8	0.75
NZ_CP045954_2	2.5\|947126\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947126-947157	32	CP031285	Escherichia fergusonii strain 40A plasmid p46_40A, complete sequence	27675-27706	8	0.75
NZ_CP045954_2	2.5\|947126\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947126-947157	32	NZ_CP022502	Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 plasmid unnamed2, complete sequence	37114-37145	8	0.75
NZ_CP045954_2	2.5\|947126\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947126-947157	32	KF929199	Staphylococcus phage vB_SepS_SEP9, complete genome	33690-33721	8	0.75
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP015322	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence	89892-89923	8	0.75
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP029211	Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence	62797-62828	8	0.75
NZ_CP045954_2	2.10\|947431\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947431-947462	32	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	317653-317684	8	0.75
NZ_CP045954_2	2.18\|947919\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947919-947950	32	MN693945	Marine virus AFVG_250M952, complete genome	30837-30868	8	0.75
NZ_CP045954_2	2.18\|947919\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947919-947950	32	MT773554	Myoviridae sp. isolate BML_2 genomic sequence	32798-32829	8	0.75
NZ_CP045954_2	2.26\|948407\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	948407-948438	32	JX434031	Pseudomonas phage JBD24, complete genome	2242-2273	8	0.75
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	13229-13260	8	0.75
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	NZ_CP010179	Escherichia coli strain H15 plasmid A, complete genome	69229-69260	8	0.75
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	NZ_KY887595	Escherichia coli strain Ec78 plasmid pEc78, complete sequence	157627-157658	8	0.75
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	132123-132154	8	0.75
NZ_CP045954_3	3.21\|965182\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965182-965213	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	101688-101719	8	0.75
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	643517-643548	8	0.75
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NZ_CP039925	Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b, complete sequence	142199-142230	8	0.75
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	191613-191644	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	194482-194513	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	AP013515	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C25	28986-29017	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP014450	Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence	9797-9828	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP018073	Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence	28530-28561	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135288	Enterococcus faecium isolate E7199 plasmid 2	57511-57542	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	152028-152059	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP027513	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence	86997-87028	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	83530-83561	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135255	Enterococcus faecium isolate E7098 plasmid 2	66370-66401	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	104616-104647	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	121871-121902	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135182	Enterococcus faecium isolate E1774 plasmid 2	72085-72116	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP041256	Enterococcus faecium strain 515 plasmid p26, complete sequence	82193-82224	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	207720-207751	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	120459-120490	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135483	Enterococcus faecium isolate E4456 plasmid 2	99700-99731	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	163349-163380	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	85782-85813	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135365	Enterococcus faecium isolate E8195 plasmid 2	86190-86221	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	106384-106415	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135415	Enterococcus faecium isolate E8328 plasmid 2	88117-88148	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135395	Enterococcus faecium isolate E8290 plasmid 2	88117-88148	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135325	Enterococcus faecium isolate E7654 plasmid 2	69331-69362	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135409	Enterococcus faecium isolate E8284 plasmid 2	88117-88148	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135385	Enterococcus faecium isolate E7933 plasmid 2	86604-86635	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135318	Enterococcus faecium isolate E7663 plasmid 2	69302-69333	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	104965-104996	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LN999988	Enterococcus faecium isolate EFE11651 plasmid II, complete sequence	190491-190522	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP023424	Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence	98856-98887	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	102263-102294	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	95865-95896	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_AP014682	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence	250-281	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LR135308	Enterococcus faecium isolate E7240 plasmid 2	56560-56591	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP033207	Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence	165331-165362	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	71300-71331	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP016164	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence	77379-77410	9	0.719
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_LT598664	Enterococcus faecium isolate Ef_aus00233 plasmid 2	70489-70520	9	0.719
NZ_CP045954_2	2.5\|947126\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947126-947157	32	NC_024355	Staphylococcus phage 6ec, complete genome	39415-39446	9	0.719
NZ_CP045954_2	2.6\|947187\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947187-947218	32	NZ_CP022317	Brachybacterium avium strain VR2415 plasmid unnamed1	29801-29832	9	0.719
NZ_CP045954_2	2.11\|947492\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947492-947523	32	NZ_CP024907	Paraburkholderia caledonica strain PHRS4 plasmid pPHRS4, complete sequence	189483-189514	9	0.719
NZ_CP045954_2	2.12\|947553\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947553-947584	32	MN855642	Bacteriophage sp. isolate 132, complete genome	10504-10535	9	0.719
NZ_CP045954_2	2.19\|947980\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947980-948011	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	1179902-1179933	9	0.719
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	1162182-1162213	9	0.719
NZ_CP045954_3	3.15\|964816\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	964816-964847	32	KY271400	Klebsiella phage 6 LV-2017, complete genome	9441-9472	9	0.719
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	NZ_CP020751	Bacillus mycoides strain Gnyt1 plasmid unnamed8, complete sequence	1945-1976	9	0.719
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	223520-223551	9	0.719
NZ_CP045954_3	3.19\|965060\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965060-965091	32	NZ_CP011146	Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence	15734-15765	9	0.719
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	108632-108663	9	0.719
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	793725-793756	9	0.719
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	2074467-2074498	9	0.719
NZ_CP045954_2	2.4\|947065\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947065-947096	32	NZ_LR134469	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 27, complete sequence	109239-109270	10	0.688
NZ_CP045954_2	2.10\|947431\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947431-947462	32	NC_008208	Aeromonas phage 25, complete genome	118581-118612	10	0.688
NZ_CP045954_2	2.10\|947431\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947431-947462	32	DQ529280	Aeromonas salmonicida bacteriophage 25, complete genome	118581-118612	10	0.688
NZ_CP045954_2	2.16\|947797\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947797-947828	32	MN694012	Marine virus AFVG_250M887, complete genome	22169-22200	10	0.688
NZ_CP045954_2	2.19\|947980\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	947980-948011	32	NZ_KU140623	Sinorhizobium sp. M14 plasmid pSinB, complete sequence	129526-129557	10	0.688
NZ_CP045954_2	2.21\|948102\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948102-948133	32	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	489441-489472	10	0.688
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP010682	Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence	38809-38840	10	0.688
NZ_CP045954_2	2.25\|948346\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	948346-948377	32	NZ_CP010644	Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence	38859-38890	10	0.688
NZ_CP045954_3	3.10\|965303\|33\|NZ_CP045954\|PILER-CR	965303-965335	33	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	277460-277492	10	0.697
NZ_CP045954_3	3.15\|964816\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	964816-964847	32	NZ_KY303941	Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence	82647-82678	10	0.688
NZ_CP045954_3	3.15\|964816\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	964816-964847	32	KP836356	Marinitoga camini virus 2, complete genome	20266-20297	10	0.688
NZ_CP045954_3	3.15\|964816\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	964816-964847	32	KP836355	Marinitoga camini virus 1, complete genome	11330-11361	10	0.688
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	51692-51723	10	0.688
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	277461-277492	10	0.688
NZ_CP045954_3	3.23\|965304\|32\|NZ_CP045954\|CRISPRCasFinder,CRT	965304-965335	32	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	90201-90232	10	0.688
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_KY352353	Bacillus thuringiensis serovar israelensis strain 1.24 plasmid pT0124-4, complete sequence	2059-2090	11	0.656
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NC_010076	Bacillus thuringiensis serovar israelensis plasmid pBtoxis, complete sequence	2059-2090	11	0.656
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NC_018510	Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence	75250-75281	11	0.656
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP053973	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed4, complete sequence	28816-28847	11	0.656
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP013279	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-4-128K, complete sequence	125849-125880	11	0.656
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP039725	Bacillus thuringiensis strain BT-59 plasmid p4, complete sequence	1759-1790	11	0.656
NZ_CP045954_2	2.2\|946943\|32\|NZ_CP045954\|PILER-CR,CRISPRCasFinder,CRT	946943-946974	32	NZ_CP045026	Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence	2059-2090	11	0.656

1. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_002638 (Salmonella enterica enterica sv Choleraesuis RF-1 plasmid pKDSC50, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

2. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY401053 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE380 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

3. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX807610 (Salmonella enterica subsp. enterica serovar Enteritidis strain CNM4839/03 plasmid pUO-SeVR1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

4. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT317612 (Salmonella enterica subsp. enterica serovar Enteritidis strain EC20120002 plasmid pSE12-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

5. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018663 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

6. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033089 (Salmonella enterica subsp. enterica serovar Enteritidis strain SEO plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

7. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026054 (Salmonella enterica strain FDAARGOS_70 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

8. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023437 (Salmonella enterica strain FORC_074 plasmid pFORC74_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

9. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040645 (Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-0432 plasmid pCFSAN074386, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

10. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043774 (Salmonella enterica strain QH plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

11. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018639 (Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

12. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025553 (Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 plasmid pPIR00558, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

13. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_010119 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pOU7519, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

14. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018653 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

15. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to HG970000 (Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 PT4 plasmid pSEN complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

16. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026570 (Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

17. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017233 (Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

18. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009767 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_007 plasmid pFORC7, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

19. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to KT317611 (Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 plasmid pSE9-641, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

20. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to KT317613 (Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 plasmid pSE12-5, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

21. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012397 (Salmonella enterica strain FORC_019 plasmid pFORC19, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

22. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015525 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10978 plasmid pSJTUF10978, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

23. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_012124 (Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 plasmid pSPCV, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

24. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022004 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051873 plasmid pCFSAN051873, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

25. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007508 (Salmonella enterica subsp. enterica serovar Enteritidis strain Durban plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

26. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008927 (Salmonella enterica subsp. enterica serovar Enteritidis strain SEJ plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

27. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041178 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367B, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

28. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050708 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

29. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015527 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10984 plasmid pSJTUF10984, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

30. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011395 (Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 plasmid pCFSAN000006, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

31. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007529 (Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 isolate CDC_2010K-0968 plasmid p00, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

32. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_006855 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSCV50, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

33. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012345 (Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 plasmid pCFSAN000679_01, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

34. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041972 (Salmonella enterica subsp. enterica serovar Enteritidis strain NCCP 16206 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

35. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN125607 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.1-2C7 plasmid p1.1-2C7, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

36. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN125608 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

37. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN125609 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

38. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011943 (Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

39. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP053399 (Salmonella enterica subsp. enterica serovar Paratyphi C strain 07-0715 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

40. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020824 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033541 plasmid pCFSAN033541, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

41. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020826 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033543 plasmid pCFSAN033543, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

42. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013098 (Salmonella enterica subsp. enterica serovar Enteritidis strain CMCC50041 plasmid pCMCC50041, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

43. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032850 (Salmonella enterica subsp. enterica serovar Enteritidis strain NCM 61 plasmid pM0061, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

44. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050711 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

45. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to LN879484 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSEN-BT, strain D7795) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

46. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018660 (Salmonella enterica subsp. enterica serovar Enteritidis strain 93-0639 plasmid pSE93-0639, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

47. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018641 (Salmonella enterica subsp. enterica serovar Enteritidis strain 70-1605 plasmid pSE70-1605, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

48. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050725 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

49. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_019120 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSENV, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

50. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018636 (Salmonella enterica subsp. enterica serovar Enteritidis strain 56-3991 plasmid pSE56-3991, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

51. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018634 (Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

52. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026714 (Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

53. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018650 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1607 plasmid pSE81-1607-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

54. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030796 (Salmonella enterica strain 2017K-0021 plasmid p2017K-0021, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

55. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

56. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050722 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE81 plasmid pSE81-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

57. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050718 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE95 plasmid pSE95-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

58. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040647 (Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-H9654 plasmid pCFSAN074385, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

59. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043434 (Salmonella enterica subsp. enterica serovar Enteritidis strain PT1 plasmid pPT1-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

60. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025557 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p1PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

61. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017178 (Salmonella enterica strain FORC_056 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

62. spacer 3.11|965364|33|NZ_CP045954|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtggccacagtctggttgtgttgttggacgaca	CRISPR spacer
gtggccacagtctggttgtgttgttggacgaca	Protospacer
*********************************

63. spacer 3.13|965486|33|NZ_CP045954|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatatccgcccatcggcc	Protospacer
*********************************

64. spacer 3.24|965365|32|NZ_CP045954|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tggccacagtctggttgtgttgttggacgaca	CRISPR spacer
tggccacagtctggttgtgttgttggacgaca	Protospacer
********************************

65. spacer 3.26|965487|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatatccgcccatcggcc	Protospacer
********************************

66. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017620 (Salmonella enterica subsp. enterica serovar Typhimurium strain 22792 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

67. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046282 (Salmonella enterica strain FDAARGOS_687 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

68. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017618 (Salmonella enterica subsp. enterica serovar Typhimurium strain 22495 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

69. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035302 (Salmonella enterica subsp. enterica strain ST1539 plasmid pST1539, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

70. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040569 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-8290 plasmid pCFSAN059542, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

71. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014980 (Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662 plasmid pSTY1-H2662, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

72. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014970 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808 isolate ST1126-1 plasmid pSTY1-1808, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

73. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014968 (Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702 plasmid pSTY1-2011K-1702, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

74. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037873 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS014854 plasmid pPNCS014854_S1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

75. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037876 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S3, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

76. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020923 (Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

77. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014973 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY2-1898, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

78. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP038435 (Salmonella enterica subsp. enterica serovar Typhimurium strain E40V plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

79. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014976 (Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640 plasmid pSTY1-2009K-1640, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

80. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_017054 (Salmonella enterica subsp. enterica serovar Typhimurium str. 798 plasmid p798_93, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

81. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047324 (Salmonella enterica subsp. enterica serovar Typhimurium strain RM13672 plasmid pRM13672, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

82. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014537 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO3 isolate SOHS 02-68 plasmid pSO3_STV, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

83. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_022570 (Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 unnamed plasmid, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

84. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039560 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

85. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039577 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014856 plasmid p10-3857.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

86. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039586 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014859 plasmid p11-0225.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

87. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN999012 (Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 plasmid pSLT, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

88. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034480 (Salmonella enterica subsp. enterica serovar Typhimurium strain 14028 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

89. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP038433 (Salmonella enterica subsp. enterica serovar Typhimurium strain E40 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

90. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016390 (Salmonella enterica subsp. enterica serovar Typhimurium strain 13-931 plasmid pSLT931, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

91. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025556 (Salmonella enterica subsp. enterica serovar Typhimurium strain PIR00538 plasmid pPIR00538, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

92. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050746 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

93. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053871 (Salmonella enterica subsp. enterica serovar Typhimurium strain SS2017 plasmid pSS2017-1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

94. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053866 (Salmonella enterica subsp. enterica serovar Typhimurium strain SL7207 plasmid pSL7202-1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

95. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041006 (Salmonella enterica strain FDAARGOS_768 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

96. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039855 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014864 plasmid p11-0972.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

97. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034231 (Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 plasmid pATCC14028, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

98. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029594 (Salmonella enterica strain DA34827 plasmid pDA34827-94, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

99. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP051287 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Gull_ST-29 plasmid pST29-94038, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

100. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017729 (Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 plasmid pSARA13, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

101. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008745 (Salmonella enterica subsp. enterica serovar Typhimurium strain VNP20009 plasmid pSLT_VNP20009, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

102. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007582 (Salmonella enterica subsp. enterica serovar Typhimurium strain 138736 plasmid, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

103. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039566 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014849 plasmid p08-7727.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

104. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_013437 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSLT-BT, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

105. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034720 (Salmonella enterica subsp. enterica serovar Typhimurium strain RSE04 plasmid pRSE04, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

106. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP051281 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Junco_ST-35 plasmid pST35-99574.1A, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

107. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029596 (Salmonella enterica strain DA34833 plasmid pDA34833-94, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

108. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP051277 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Sparrow_ST-87 plasmid pST87-92921, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

109. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS997974 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pSLT-BT) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

110. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to LN794247 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSBLT, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

111. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041974 (Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP 16207 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

112. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039580 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014857 plasmid p10-3881.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

113. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039583 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014858 plasmid p10-8609.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

114. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044969 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS007087.2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

115. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044959 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

116. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039596 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014865 plasmid p12-4331.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

117. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039592 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014862 plasmid p11-0500.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

118. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039568 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014850 plasmid p08-8136.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

119. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP014577 (Salmonella enterica subsp. enterica serovar Typhimurium strain RM9437 plasmid pRM9437, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

120. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP013721 (Salmonella enterica subsp. enterica serovar Typhimurium strain RM10607 plasmid pRM10607, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

121. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_016864 (Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 plasmid pSTUK-100, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

122. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014962 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 plasmid pSTY1-1899, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

123. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_016861 (Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 plasmid pSTMDT12_L, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

124. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021464 (Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

125. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029838 (Salmonella enterica subsp. enterica serovar Typhimurium strain 10ST07093 plasmid p10ST07093B, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

126. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014050 (Salmonella enterica strain FDAARGOS_94 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

127. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038848 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014851 plasmid p09-0499.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

128. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050736 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST90 plasmid pST90-2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

129. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040565 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7699 plasmid pCFSAN059544, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

130. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_003277 (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 plasmid pSLT, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

131. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022071 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

132. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051268 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Hawk_ST-33 plasmid pST33-93798, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

133. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

134. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_016855 (Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

135. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT855377 (Salmonella enterica subsp. enterica serovar Typhimurium isolate STMU2UK plasmid 2) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

136. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027413 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_320 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

137. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027409 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_317 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

138. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014359 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU15 plasmid pYU15_94, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

139. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015158 (Salmonella enterica subsp. enterica serovar Typhimurium strain NC983 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

140. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018658 (Salmonella enterica subsp. enterica serovar Enteritidis strain 92-0392 plasmid pSE92-0392, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

141. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028200 (Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN018746 plasmid pGMI14-001, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

142. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_021155 (Salmonella enterica subsp. enterica serovar Typhimurium str. U288 plasmid pSTU288-1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

143. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014357 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO2 isolate SOHS 02-20 plasmid pSO2_STV, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

144. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028319 (Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067216 plasmid pSC-09-1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

145. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050741 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST56 plasmid pST56-2, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

146. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040901 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP18-6199 plasmid pCFSAN074387, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

147. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040322 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014879 plasmid p16-6397.1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

148. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045950 (Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010529 plasmid pAUSMDU00010529_01, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

149. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015599 (Salmonella enterica strain FORC_030 plasmid pFORC_030, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

150. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026701 (Salmonella enterica subsp. enterica serovar Typhimurium strain AR_0031 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

151. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to KX777254 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSTV-Mu1, complete sequence) position: , mismatch: 1, identity: 0.969

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

152. spacer 3.13|965486|33|NZ_CP045954|PILER-CR matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

153. spacer 3.13|965486|33|NZ_CP045954|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

154. spacer 3.13|965486|33|NZ_CP045954|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

155. spacer 3.13|965486|33|NZ_CP045954|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

156. spacer 3.26|965487|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

157. spacer 3.26|965487|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

158. spacer 3.26|965487|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

159. spacer 3.26|965487|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

160. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagccgaaaa	Protospacer
*********************** *****.**

161. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagccgaaaa	Protospacer
*********************** *****.**

162. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046005 (Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagccgaaaa	Protospacer
*********************** *****.**

163. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MG592476 (Vibrio phage 1.104.O._10N.286.49.A12, partial genome) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgcagggatattgcgccgagccgagaa	Protospacer
******** ************** ********

164. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MG592538 (Vibrio phage 1.171.O._10N.261.52.F12, partial genome) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatactgcgccgagccgagaa	Protospacer
***************.******* ********

165. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MG592428 (Vibrio phage 1.046.O._10N.286.52.E3, partial genome) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgcagggatattgcgccgagccgagaa	Protospacer
******** ************** ********

166. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

167. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021537 (Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

168. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

169. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

170. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH580301 (Escherichia coli strain 1107 plasmid p1107-99K, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

171. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattacgccgcgcagtcaa	Protospacer
*****************.******** *  **

172. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040893 (Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattacgccgcgcagtcaa	Protospacer
*****************.******** *  **

173. spacer 2.17|947858|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 6, identity: 0.812

cgataatttataaattttcgtccactcatcaa	CRISPR spacer
cgctgcgttataaatcatcgtccactcatcaa	Protospacer
** *.  ********. ***************

174. spacer 2.20|948041|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 6, identity: 0.812

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

175. spacer 2.20|948041|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 6, identity: 0.812

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

176. spacer 2.20|948041|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 6, identity: 0.812

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

177. spacer 2.20|948041|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 6, identity: 0.812

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

178. spacer 2.20|948041|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 6, identity: 0.812

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

179. spacer 2.20|948041|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 6, identity: 0.812

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

180. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN693125 (Marine virus AFVG_25M7, complete genome) position: , mismatch: 7, identity: 0.781

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
acagaaatgattaaatcaaaaacaaaactatc	Protospacer
.* ***.. **.***************.****

181. spacer 2.19|947980|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to KX657793 (Mycobacterium phage DarthPhader, complete genome) position: , mismatch: 7, identity: 0.781

ccgcagaacgccgcatcgccgaactggacaaa	CRISPR spacer
cgttcgaccgccgcatagccgaactggacaag	Protospacer
*  . ** ******** **************.

182. spacer 2.24|948285|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

tcccaactcgtcagggcggttatccagcgcca	CRISPR spacer
ttcccgatcgtcagggcggtgattcagcgcga	Protospacer
*.** . ************* **.****** *

183. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtg-cgccgggatattgcgccgcgccgagaa	CRISPR spacer
-catgccgccgcgatattgccccgcgccgccag	Protospacer
 *.** ***** ******** ********  *.

184. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtg-cgccgggatattgcgccgcgccgagaa	CRISPR spacer
-catgccgccgcgatattgccccgcgccgccag	Protospacer
 *.** ***** ******** ********  *.

185. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtg-cgccgggatattgcgccgcgccgagaa	CRISPR spacer
-catgccgccgcgatattgccccgcgccgccag	Protospacer
 *.** ***** ******** ********  *.

186. spacer 3.26|965487|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgagaaacgcctggatctccgcccaccgccg	Protospacer
*** . *********** ********.** *

187. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

188. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

189. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

190. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

191. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

192. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

193. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

194. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

195. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

196. spacer 2.1|946882|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.75

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

197. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MG592462 (Vibrio phage 1.087.A._10N.261.45.F9, partial genome) position: , mismatch: 8, identity: 0.75

gccgaagccatcaaatcaaaaacaaa-attatc	CRISPR spacer
aaagaagcaatcaaatcaaaaagaaagaacat-	Protospacer
.  ***** ************* *** * .**

198. spacer 2.5|947126|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to CP031285 (Escherichia fergusonii strain 40A plasmid p46_40A, complete sequence) position: , mismatch: 8, identity: 0.75

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
aaacttaatagcagaaaataaatatcgtgaca	Protospacer
. * ******.************* ** *. *

199. spacer 2.5|947126|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022502 (Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
aaacttaatagcagaaaataaatatcgtgaca	Protospacer
. * ******.************* ** *. *

200. spacer 2.5|947126|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to KF929199 (Staphylococcus phage vB_SepS_SEP9, complete genome) position: , mismatch: 8, identity: 0.75

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
gaaattagtaaaagaaaataaataggagagat	Protospacer
* *****.*** ************* ...**

201. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 8, identity: 0.75

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
cacgtcgctgccgtccgcccgctccacggaga	Protospacer
   * *********** ******* ***  **

202. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029211 (Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence) position: , mismatch: 8, identity: 0.75

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gtagccgctgccgtcccaccgctcgtggtggc	Protospacer
*.** ************ *******  *. *

203. spacer 2.10|947431|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 8, identity: 0.75

accacatcaatgaccacatca-----cgcagatatta	CRISPR spacer
accacatcaacgaccacatcaagcaccgcgaa-----	Protospacer
**********.**********     ***..*

204. spacer 2.18|947919|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN693945 (Marine virus AFVG_250M952, complete genome) position: , mismatch: 8, identity: 0.75

accgttatctgctggttgatacttccccgagc---	CRISPR spacer
gccgttatcggctggtttatactt---aaagcaaa	Protospacer
.******** ******* ******    .***

205. spacer 2.18|947919|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MT773554 (Myoviridae sp. isolate BML_2 genomic sequence) position: , mismatch: 8, identity: 0.75

accgttatctgctggttgatacttccccgagc	CRISPR spacer
aacattatctgctggttgatagtttccataat	Protospacer
* *.***************** **.**  *..

206. spacer 2.26|948407|32|NZ_CP045954|CRISPRCasFinder,CRT matches to JX434031 (Pseudomonas phage JBD24, complete genome) position: , mismatch: 8, identity: 0.75

gtcacgaggtctgacgcggatgtgatg--agtta	CRISPR spacer
tcggcgaggtctgccgcgaatgtgatggcagt--	Protospacer
 . .********* ****.********  ***

207. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tctgatttcaacattgcagcaaaatcgaaaga	Protospacer
**  . *  **.**************.*****

208. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP010179 (Escherichia coli strain H15 plasmid A, complete genome) position: , mismatch: 8, identity: 0.75

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tctgatttcaacattgcagcaaaatcgaaaga	Protospacer
**  . *  **.**************.*****

209. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_KY887595 (Escherichia coli strain Ec78 plasmid pEc78, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tctgatttcaacattgcagcaaaatcgaaaga	Protospacer
**  . *  **.**************.*****

210. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tctgatttcaacattgcagcaaaatcgaaaga	Protospacer
**  . *  **.**************.*****

211. spacer 3.21|965182|32|NZ_CP045954|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

tataattggcgtccatatatctggatatttac	CRISPR spacer
attatctttcgtctaaatatctggatatttac	Protospacer
  ** .*  ****.* ****************

212. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
aggtcgaggagcggcgggcgatcagcgcagcg	Protospacer
 ********** ************ .* *. .

213. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP039925 (Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b, complete sequence) position: , mismatch: 8, identity: 0.75

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
gcgtattgaagcggcgggcgatcactgaagaa	Protospacer
  **   *.** *****************.**

214. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
agtaaagccatcaaagcaaaaacaaattttag	Protospacer
. ..*********** ********** **

215. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
tgtaaaaccatcacatcaaaaacaaaatattt	Protospacer
  ..**.****** **************  *.

216. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to AP013515 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C25) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
tttaagtccatcaaataaagaacaaaattata	Protospacer
 ...*. ********* **.***********

217. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

218. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018073 (Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

219. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135288 (Enterococcus faecium isolate E7199 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

220. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

221. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027513 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

222. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

223. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135255 (Enterococcus faecium isolate E7098 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

224. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

225. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

226. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135182 (Enterococcus faecium isolate E1774 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

227. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041256 (Enterococcus faecium strain 515 plasmid p26, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

228. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

229. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

230. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135483 (Enterococcus faecium isolate E4456 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

231. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

232. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

233. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135365 (Enterococcus faecium isolate E8195 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

234. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

235. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135415 (Enterococcus faecium isolate E8328 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

236. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135395 (Enterococcus faecium isolate E8290 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

237. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135325 (Enterococcus faecium isolate E7654 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

238. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135409 (Enterococcus faecium isolate E8284 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

239. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135385 (Enterococcus faecium isolate E7933 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

240. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135318 (Enterococcus faecium isolate E7663 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

241. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

242. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN999988 (Enterococcus faecium isolate EFE11651 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

243. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023424 (Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

244. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

245. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_017963 (Enterococcus faecium DO plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

246. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014682 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ggaaaagccatcaaaacaaaaacagaactgga	Protospacer
*  .*********** ********.**.*.

247. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135308 (Enterococcus faecium isolate E7240 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

248. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033207 (Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

249. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

250. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016164 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

251. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT598664 (Enterococcus faecium isolate Ef_aus00233 plasmid 2) position: , mismatch: 9, identity: 0.719

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ttaaaaattatcaaatcaaaaacaaattaatc	Protospacer
 . .**...***************** * ***

252. spacer 2.5|947126|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 9, identity: 0.719

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
aaaattagtaaaagaaaataaataggaggggt	Protospacer
. *****.*** ************* ..**.

253. spacer 2.6|947187|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022317 (Brachybacterium avium strain VR2415 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
ctcagcgctgccgtcctcccggtcgacgagga	Protospacer
 . ..***********.**** ******  **

254. spacer 2.11|947492|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024907 (Paraburkholderia caledonica strain PHRS4 plasmid pPHRS4, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtgtttacttcaatagcgacgttgtgag	CRISPR spacer
gaactcggttgcttcaacagcgacgttgtgac	Protospacer
 . * .* **.******.*************

255. spacer 2.12|947553|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN855642 (Bacteriophage sp. isolate 132, complete genome) position: , mismatch: 9, identity: 0.719

aggttgaccatcgtcagcttcataaagattta	CRISPR spacer
tacataaagatcgtcaccttcacaaagattta	Protospacer
 .  *.*  ******* *****.*********

256. spacer 2.19|947980|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccgcagaacgccgcatcgccgaactggacaaa	CRISPR spacer
ccgcagaacgccgcattgccggacctcattcc	Protospacer
****************.****.**.  *.

257. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
tcgcgcgccgggatattgcgcagcgtgaacgc	Protospacer
 **.***************** ***. .* .

258. spacer 3.15|964816|32|NZ_CP045954|CRISPRCasFinder,CRT matches to KY271400 (Klebsiella phage 6 LV-2017, complete genome) position: , mismatch: 9, identity: 0.719

cgacgcctcttttttctgtaccttttgccggt	CRISPR spacer
ggtaaggttttttttctgtaccttttacgggt	Protospacer
 *  .  *.*****************.* ***

259. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP020751 (Bacillus mycoides strain Gnyt1 plasmid unnamed8, complete sequence) position: , mismatch: 9, identity: 0.719

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tgtattcggaatattgtaacaaaatcaaaaaa	Protospacer
*     .*********.*.***********.*

260. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 9, identity: 0.719

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tgtattcggaatattgtaacaaaatcaaaaaa	Protospacer
*     .*********.*.***********.*

261. spacer 3.19|965060|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 9, identity: 0.719

tcacggtggaatattgcagcaaaatcaaaaga	CRISPR spacer
tgtattcggaatattgtaacaaaatcaaaaaa	Protospacer
*     .*********.*.***********.*

262. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
aggtcgaggagcggcaggcgatcagcgcagcg	Protospacer
 ********** ***.******** .* *. .

263. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.719

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
aggtcgaggagcggcaggcgatcagcgcagcg	Protospacer
 ********** ***.******** .* *. .

264. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.719

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
aggtcgaggagcggcaggcgatcagcgcagcg	Protospacer
 ********** ***.******** .* *. .

265. spacer 2.4|947065|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134469 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 27, complete sequence) position: , mismatch: 10, identity: 0.688

gattttgatatccactgcccaccggtggggat	CRISPR spacer
cgcactcggatccgctgcccaccggtggcgat	Protospacer
 .. .* . ****.************** ***

266. spacer 2.10|947431|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_008208 (Aeromonas phage 25, complete genome) position: , mismatch: 10, identity: 0.688

accacatcaatgaccacatcacgcagatatta	CRISPR spacer
ttcacatcaatgacgacatcacccacactggt	Protospacer
 .************ ******* ** *.

267. spacer 2.10|947431|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to DQ529280 (Aeromonas salmonicida bacteriophage 25, complete genome) position: , mismatch: 10, identity: 0.688

accacatcaatgaccacatcacgcagatatta	CRISPR spacer
ttcacatcaatgacgacatcacccacactggt	Protospacer
 .************ ******* ** *.

268. spacer 2.16|947797|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to MN694012 (Marine virus AFVG_250M887, complete genome) position: , mismatch: 10, identity: 0.688

cttgtcggcgttgctcacgtgactatttcgca	CRISPR spacer
ggtacttacgttgctcacgtaactattacgcc	Protospacer
  *... .************.****** ***

269. spacer 2.19|947980|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU140623 (Sinorhizobium sp. M14 plasmid pSinB, complete sequence) position: , mismatch: 10, identity: 0.688

ccgcagaacgccgcatcgccgaactggacaaa	CRISPR spacer
cgatcgaacagcgcatcgccgaactggaagcg	Protospacer
* .. ****. ***************** . .

270. spacer 2.21|948102|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 10, identity: 0.688

cgccgccagctggaaaaatgccgcctgttaat	CRISPR spacer
atccgcaagctggaaaaataccgccgcatgca	Protospacer
  **** ************.*****   *.

271. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010682 (Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
cggtgccccaggatattgcgccgcgcatgccg	Protospacer
  **** **.****************  .  .

272. spacer 2.25|948346|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010644 (Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
cggtgccccaggatattgcgccgcgcacgccg	Protospacer
  **** **.****************  .  .

273. spacer 3.10|965303|33|NZ_CP045954|PILER-CR matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 10, identity: 0.697

gtggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
gtggtcgagcaggggcgggtgatcgacatgatc	Protospacer
********* *********.****. .. .*

274. spacer 3.15|964816|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_KY303941 (Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgcctcttttttctgtaccttttgccggt	CRISPR spacer
gatcatttcttttttctggatcttttgccgca	Protospacer
 . *...*********** *.*********

275. spacer 3.15|964816|32|NZ_CP045954|CRISPRCasFinder,CRT matches to KP836356 (Marinitoga camini virus 2, complete genome) position: , mismatch: 10, identity: 0.688

cgacgcctcttttttctgtaccttttgccggt	CRISPR spacer
tttctgtatttttttctgtatcttttgctggt	Protospacer
.  *  . .***********.*******.***

276. spacer 3.15|964816|32|NZ_CP045954|CRISPRCasFinder,CRT matches to KP836355 (Marinitoga camini virus 1, complete genome) position: , mismatch: 10, identity: 0.688

cgacgcctcttttttctgtaccttttgccggt	CRISPR spacer
tttctgtatttttttctgtatcttttgctggt	Protospacer
.  *  . .***********.*******.***

277. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
gcgtcgaggtggtgcgggcgatcaccacgatc	Protospacer
  ******* ** ************.. .*

278. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 10, identity: 0.688

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
tggtcgagcaggggcgggtgatcgacatgatc	Protospacer
******** *********.****. .. .*

279. spacer 3.23|965304|32|NZ_CP045954|CRISPRCasFinder,CRT matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 10, identity: 0.688

tggtcgaggaggggcgggcgatcactgaaaaa	CRISPR spacer
gcgtcgaggtggtgcgggcgatcaccacgatc	Protospacer
  ******* ** ************.. .*

280. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY352353 (Bacillus thuringiensis serovar israelensis strain 1.24 plasmid pT0124-4, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

281. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_010076 (Bacillus thuringiensis serovar israelensis plasmid pBtoxis, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

282. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

283. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053973 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

284. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013279 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-4-128K, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

285. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039725 (Bacillus thuringiensis strain BT-59 plasmid p4, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

286. spacer 2.2|946943|32|NZ_CP045954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045026 (Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence) position: , mismatch: 11, identity: 0.656

gccgaagccatcaaatcaaaaacaaaattatc	CRISPR spacer
ctatttaccaacaaaacaaaaacaaaattaat	Protospacer
 .    .*** **** ************** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1597915 : 1627496

Salmonella_phage(38.46%)

tail,protease,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021000536.1\|1597915_1598410_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_000228070.1\|1598823_1599315_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_001260058.1\|1599304_1599568_+	chaperone NapD	NA	NA	NA	NA
WP_000778097.1\|1599564_1602051_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_000091673.1\|1602057_1602753_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000013529.1\|1602739_1603609_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000835182.1\|1603724_1604174_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_000431778.1\|1604183_1604786_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000888541.1\|1604806_1605424_+	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A2R8FG22	Brazilian_cedratvirus	2.4e-10	29.8
WP_001238332.1\|1610020_1611064_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_001115498.1\|1611107_1611755_-	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_000281877.1\|1612484_1613048_+	acyloxyacyl hydrolase	NA	NA	NA	NA
WP_001653202.1\|1613239_1613443_-	virulence protein MsgA	NA	NA	NA	NA
WP_000624225.1\|1613745_1614537_+\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6
WP_001113462.1\|1614833_1615037_+\|tail	tail protein	NA	NA	NA	NA
WP_001115840.1\|1615205_1617572_+	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
WP_001202279.1\|1617900_1618890_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
WP_077905362.1\|1618904_1619273_+	antitermination protein Q	A5LH77	Enterobacteria_phage	1.4e-50	80.8
WP_000894640.1\|1619301_1620633_-	AAA family ATPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
WP_001120499.1\|1620929_1621259_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000554739.1\|1621851_1623093_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001215679.1\|1623095_1623623_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000022213.1\|1624000_1624444_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_000639473.1\|1624497_1626327_-	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
WP_000884778.1\|1626674_1626965_-	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000806401.1\|1626992_1627496_+	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3

DBSCAN-SWA_2

1699577 : 1708747

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1699577_1700525_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824854.1\|1700508_1701240_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1701220_1701328_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1701387_1702119_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272845.1\|1702340_1704026_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_000598637.1\|1704022_1704742_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1704788_1705256_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001197952.1\|1705312_1705843_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1706014_1706473_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_154079482.1\|1706713_1708747_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	3.0e-54	27.6

DBSCAN-SWA_3

1777056 : 1787562

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111840.1\|1777056_1778460_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.3e-21	27.1
WP_000981471.1\|1778637_1779531_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697838.1\|1779907_1780993_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.4e-103	53.9
WP_001023662.1\|1780992_1781892_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000857529.1\|1781939_1782818_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_000973708.1\|1782818_1783370_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000018226.1\|1783375_1784368_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648784.1\|1784364_1785138_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565905.1\|1785142_1786222_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000126349.1\|1786248_1787562_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_4

1873556 : 1884141

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001219015.1\|1873556_1874030_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
WP_001669246.1\|1874677_1874968_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	5.2e-08	49.1
WP_000598920.1\|1875339_1876137_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001521460.1\|1876617_1876779_+	hypothetical protein	NA	NA	NA	NA
WP_000394197.1\|1876905_1877325_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457663.1\|1877327_1878596_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.3e-227	91.9
WP_000208509.1\|1879050_1879263_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|1879273_1879462_+	hypothetical protein	NA	NA	NA	NA
WP_001080668.1\|1879722_1880901_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	6.6e-110	57.2
WP_000107430.1\|1881550_1881850_+	membrane protein	NA	NA	NA	NA
WP_000377042.1\|1881941_1882637_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_001157301.1\|1882710_1884141_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_5

1987376 : 1994185

Salmonella_phage(33.33%)

tail,integrase

attL 1989586:1989608|attR 1999301:1999323

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000856224.1\|1987376_1987607_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
WP_000168393.1\|1987744_1988119_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000979702.1\|1988119_1988995_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000722368.1\|1989011_1989365_+	YebY family protein	NA	NA	NA	NA
1989586:1989608	attL	NA	NA	NA	NA
WP_001520095.1\|1989738_1990593_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-73	50.9
WP_010989030.1\|1990652_1991147_-	hypothetical protein	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
WP_001013467.1\|1991336_1991567_+	hypothetical protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
WP_001050882.1\|1991620_1992154_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
WP_000789530.1\|1992410_1992578_-	lytic enzyme	NA	NA	NA	NA
WP_001521334.1\|1992642_1992831_-	hypothetical protein	NA	NA	NA	NA
WP_000275418.1\|1993303_1994185_+\|tail	tail assembly protein	A0A0M4RTP2	Salmonella_phage	2.2e-65	76.0
1999301:1999323	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2599450 : 2687364

104

Enterobacteria_phage(31.37%)

portal,integrase,head,protease,capsid,tRNA,tail,terminase,lysis,holin

attL 2620261:2620275|attR 2689997:2690011

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000829539.1\|2599450_2599978_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_000272241.1\|2599974_2600082_-	hypothetical protein	NA	NA	NA	NA
WP_000460698.1\|2600287_2600734_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_000579793.1\|2600713_2601508_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000205341.1\|2601608_2602793_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_001222527.1\|2602911_2603259_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_000487126.1\|2603244_2603556_-	hypothetical protein	NA	NA	NA	NA
WP_000673492.1\|2603624_2603876_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_001589065.1\|2604071_2604170_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_000512149.1\|2604308_2604557_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_000762776.1\|2604871_2605513_-	hypothetical protein	NA	NA	NA	NA
WP_000513733.1\|2605742_2605925_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_001248993.1\|2605927_2606290_-	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_000457190.1\|2606462_2607101_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_000617985.1\|2607297_2607843_-	chorismate mutase	NA	NA	NA	NA
WP_000908464.1\|2607925_2608075_+	hypothetical protein	NA	NA	NA	NA
WP_000208086.1\|2608153_2608402_+	hypothetical protein	NA	NA	NA	NA
WP_000190263.1\|2608656_2609505_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001738208.1\|2609573_2610167_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000175803.1\|2610311_2611100_-	cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9)	NA	NA	NA	NA
WP_000234685.1\|2611208_2611859_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_001183699.1\|2612052_2612379_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_000456065.1\|2612572_2613706_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_000947460.1\|2613787_2614378_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_000950207.1\|2614371_2615169_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_000966645.1\|2615162_2615975_-	ABC transporter permease	NA	NA	NA	NA
WP_001520270.1\|2615964_2616939_-	ABC transporter permease	NA	NA	NA	NA
WP_000946082.1\|2616938_2618573_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000182479.1\|2619254_2619569_+	hypothetical protein	NA	NA	NA	NA
WP_000929982.1\|2619717_2620248_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	2.8e-36	70.5
2620261:2620275	attL	NA	NA	NA	NA
WP_000761746.1\|2620330_2621374_-	exo-alpha-sialidase	NA	NA	NA	NA
WP_001518864.1\|2621712_2622183_-	Hsp20 family protein	NA	NA	NA	NA
WP_000480529.1\|2622331_2622604_-	hypothetical protein	NA	NA	NA	NA
WP_000758946.1\|2622803_2622929_-	hypothetical protein	NA	NA	NA	NA
WP_000977725.1\|2623306_2623651_+	c-type lysozyme inhibitor	NA	NA	NA	NA
WP_000789471.1\|2624887_2625445_-	virulence membrane protein PagC	Q9LA63	Enterobacterial_phage	1.0e-15	33.0
WP_001535993.1\|2626257_2626521_+	virulence protein PagD	NA	NA	NA	NA
WP_001537306.1\|2626652_2626865_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_001520581.1\|2627279_2627801_+	lipoprotein	NA	NA	NA	NA
WP_000497451.1\|2627991_2628231_+	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
WP_001033408.1\|2628719_2629508_+	lipoprotein	NA	NA	NA	NA
WP_000917255.1\|2630488_2631613_-	type III secretion system effector SopF	NA	NA	NA	NA
WP_001521673.1\|2632060_2632273_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	92.6
WP_000334551.1\|2632526_2633198_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.1e-80	59.9
WP_154079489.1\|2633517_2635629_-	type III secretion system effector E3 ubiquitin transferase SspH1	Q9MBL9	Phage_Gifsy-2	8.1e-26	46.2
WP_000457876.1\|2637162_2637288_-	hypothetical protein	NA	NA	NA	NA
WP_000143179.1\|2638154_2638739_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-87	84.8
WP_154079490.1\|2638738_2641180_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	2.1e-86	61.7
WP_000178849.1\|2641233_2641476_-	hypothetical protein	NA	NA	NA	NA
WP_080191857.1\|2641514_2644877_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	79.3
WP_080191858.1\|2644938_2645586_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	6.6e-88	77.2
WP_000662740.1\|2645483_2646221_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.2e-128	84.6
WP_047596067.1\|2646227_2646926_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	1.6e-103	75.9
WP_000447370.1\|2646935_2647265_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	7.3e-43	71.3
WP_080191859.1\|2647267_2650309_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	2.7e-296	65.1
WP_010989052.1\|2650280_2650619_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000479607.1\|2650615_2651011_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_080191860.1\|2651061_2651808_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000033885.1\|2651815_2652217_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000677089.1\|2652213_2652792_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000083293.1\|2652778_2653156_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-28	55.6
WP_000201485.1\|2653166_2653532_-	DNA packaging protein	NA	NA	NA	NA
WP_000522566.1\|2653589_2654618_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_080191861.1\|2654672_2655020_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.6e-19	52.7
WP_154079491.1\|2655032_2656529_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_000831821.1\|2656518_2658099_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
WP_000201415.1\|2658095_2658299_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_079970731.1\|2658282_2660214_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.4e-258	65.7
WP_001102153.1\|2660185_2660731_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_152279297.1\|2661016_2661418_+	inhibitor of g-type lysozyme	NA	NA	NA	NA
WP_001533543.1\|2661653_2662106_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_015701345.1\|2662123_2662576_-	lysozyme	A0A0M4R365	Salmonella_phage	1.0e-79	98.0
WP_001574216.1\|2662559_2662889_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001110783.1\|2663164_2663851_+\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
WP_080191863.1\|2664065_2664254_-	hypothetical protein	NA	NA	NA	NA
WP_154079503.1\|2664760_2665420_-	ORF6N domain-containing protein	A0A088CD42	Shigella_phage	4.7e-41	65.4
WP_154079492.1\|2665808_2666486_-	antiterminator	I6PDF8	Cronobacter_phage	7.7e-63	54.0
WP_023194650.1\|2666482_2666623_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	2.1e-07	76.3
WP_154079493.1\|2666619_2666847_-	DNA breaking-rejoining protein	A0A0M4RU10	Salmonella_phage	4.8e-17	72.5
WP_001604753.1\|2666843_2667443_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.8e-96	83.4
WP_152279298.1\|2667506_2667812_-	hypothetical protein	NA	NA	NA	NA
WP_080191865.1\|2668442_2670422_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	8.6e-163	46.3
WP_152279299.1\|2670818_2671949_+	diguanylate cyclase	NA	NA	NA	NA
WP_058656896.1\|2672235_2672631_-	DUF977 family protein	A0A088CBK9	Shigella_phage	1.7e-17	38.1
WP_000140163.1\|2672645_2673107_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-67	74.8
WP_080191575.1\|2673099_2674107_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	5.3e-124	67.5
WP_025711034.1\|2674153_2674648_-	hypothetical protein	NA	NA	NA	NA
WP_001033909.1\|2674634_2674889_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
WP_001224470.1\|2674985_2675411_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	9.3e-14	56.3
WP_001674119.1\|2675719_2675875_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	4.7e-08	55.3
WP_023233097.1\|2676256_2676541_+	hypothetical protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
WP_152280164.1\|2676615_2676951_+	hypothetical protein	NA	NA	NA	NA
WP_152280163.1\|2677091_2679782_+	exodeoxyribonuclease VIII	Q9QF34	Lambdoid_phage	1.4e-115	75.3
WP_001126032.1\|2679774_2680605_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
WP_001033921.1\|2680640_2680961_+	hypothetical protein	A0A222YY67	Escherichia_phage	3.6e-34	60.2
WP_000066252.1\|2680953_2681286_+	hypothetical protein	S4TNP2	Salmonella_phage	3.0e-20	80.3
WP_000069466.1\|2681282_2681786_+	hypothetical protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
WP_023244951.1\|2681835_2682072_+	excisionase	NA	NA	NA	NA
WP_000741321.1\|2682061_2683204_+\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	1.4e-173	80.0
WP_000444509.1\|2683317_2684568_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
WP_001249412.1\|2684739_2685405_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000825957.1\|2685401_2685731_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_000476067.1\|2685742_2686204_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000004541.1\|2686257_2687364_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
2689997:2690011	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2935541 : 2943561

Enterobacteria_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085983316.1\|2935541_2936796_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9
WP_000934063.1\|2937197_2939474_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|2939504_2939825_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|2940148_2940370_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000125877.1\|2940499_2942446_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_001201751.1\|2942442_2943561_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_8

4317107 : 4364715

Burkholderia_phage(40.91%)

tail,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182230.1\|4317107_4318106_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039335.1\|4318193_4319504_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416271.1\|4319750_4320266_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4320364_4320574_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4320595_4320709_-	hypothetical protein	NA	NA	NA	NA
WP_001128113.1\|4320705_4322031_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4322209_4322818_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4322926_4323295_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4323465_4325886_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4325984_4326857_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4326870_4327368_-	chorismate lyase	NA	NA	NA	NA
WP_000782504.1\|4327548_4328466_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973645.1\|4328629_4329988_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4330076_4331186_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695417.1\|4331547_4332738_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4332869_4334414_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4334428_4335319_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982749.1\|4335484_4335895_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4336037_4338134_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_000977979.1\|4338133_4338871_-	hypothetical protein	NA	NA	NA	NA
WP_022742863.1\|4338867_4339536_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4339569_4339812_-	outer membrane protein	NA	NA	NA	NA
WP_000790037.1\|4340255_4341905_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136400.1\|4342249_4343599_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4343731_4344079_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226442.1\|4344654_4344942_+	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_001270441.1\|4344944_4345550_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_000777266.1\|4345562_4345877_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000449433.1\|4346036_4346492_+	hypothetical protein	NA	NA	NA	NA
WP_000875314.1\|4346488_4346686_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729852.1\|4346675_4348103_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000907494.1\|4348102_4348627_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003642.1\|4348678_4348996_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4348955_4349084_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001262499.1\|4349180_4351535_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.0e-66	30.6
WP_000271423.1\|4351534_4352488_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4352487_4352697_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818154.1\|4352684_4353728_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_000679398.1\|4353737_4354460_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000593182.1\|4354787_4355150_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703633.1\|4355146_4356076_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	1.4e-150	84.1
WP_000632053.1\|4356075_4357623_+	hypothetical protein	B9UDL6	Salmonella_phage	3.8e-49	29.9
WP_001093501.1\|4357786_4358146_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000951737.1\|4358136_4359252_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	2.0e-100	52.0
WP_000359509.1\|4359244_4359877_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	8.6e-24	56.4
WP_000368193.1\|4359879_4361538_+\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	1.8e-52	52.7
WP_001151758.1\|4361544_4362159_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000084336.1\|4362155_4362611_+	hypothetical protein	NA	NA	NA	NA
WP_024133214.1\|4362991_4363408_+	serine acetyltransferase	NA	NA	NA	NA
WP_000587740.1\|4363986_4364715_+	hypothetical protein	A0A077SLK3	Escherichia_phage	7.3e-35	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045954

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection