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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045967 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_04, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045968 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_05, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045964 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045963 Mycobacterium chimaera strain AUSMDU00007395 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,RT,DinG,cas4,WYL,c2c9_V-U4 0 0 9 0
NZ_CP045965 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_02, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045966 Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_03, complete sequence 0 crisprs csa3,RT 0 0 0 0

Results visualization

1. NZ_CP045963
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045963_1 513574-513662 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045963_2 1804134-1804212 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045963_3 2784539-2784652 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045963_4 4389190-4389286 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045963_5 4982944-4983077 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 272945 : 342555 55 Rhodococcus_phage(20.0%) integrase,transposase attL 329332:329391|attR 350920:352439
DBSCAN-SWA_2 908604 : 974047 45 Staphylococcus_phage(37.5%) integrase,transposase attL 889000:889019|attR 973843:973862
DBSCAN-SWA_3 979013 : 1042238 45 Burkholderia_virus(20.0%) integrase,transposase attL 977997:978029|attR 1039231:1039263
DBSCAN-SWA_4 1066179 : 1139504 47 Staphylococcus_phage(50.0%) integrase,transposase attL 1085709:1085725|attR 1131311:1131327
DBSCAN-SWA_5 2152149 : 2208717 28 Tupanvirus(57.14%) integrase,transposase attL 2163499:2163558|attR 2213247:2217835
DBSCAN-SWA_6 2987068 : 3055121 58 Mycobacterium_phage(18.18%) integrase,transposase attL 2983801:2983817|attR 3033012:3033028
DBSCAN-SWA_7 3986298 : 3995388 8 Shahe_endorna-like_virus(50.0%) NA NA
DBSCAN-SWA_8 4709387 : 4715963 7 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_9 5273712 : 5282358 8 Burkholderia_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage