CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045955	Salmonella enterica subsp. enterica serovar Enteritidis strain AUSMDU00010528 chromosome, complete genome	3 crisprs	PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL	0	10	5	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045955_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045955_1

176908-176989

Orphan

Consensus_repeat	Method
GATGGCGCTGCGCTTATCGGGCCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045955_1

>merge|NZ_CP045955|1|176908-176989|CRISPRCasFinder
GATGGCGCTGCGCTTATCGGGCCTACCGCATTGATATCAGCCTGGTGGTAATGTCTGATGGCGCTGCGCTTATCGGGCCTAC

>NZ_CP045955|1|1|176908-176989|CRISPRCasFinder
GATGGCGCTGCGCTTATCGGGCCTAC	CGCATTGATATCAGCCTGGTGGTAATGTCT
GATGGCGCTGCGCTTATCGGGCCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045955.1\|WP_080083122.1\|177063_179019_-\|glycoside-hydrolase-family-127-protein	unknown	unknown	gnl\|CDD\|226063
NZ_CP045955.1\|WP_000301822.1\|184957_186235_-\|2,3-diketo-L-gulonate-transporter-large-permease-YiaN	unknown	unknown	gnl\|CDD\|185020
NZ_CP045955.1\|WP_001244035.1\|180947_181808_-\|L-ribulose-5-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|237308
NZ_CP045955.1\|WP_000089535.1\|181800_182463_-\|3-keto-L-gulonate-6-phosphate-decarboxylase-UlaD	unknown	unknown	gnl\|CDD\|183962
NZ_CP045955.1\|WP_000893169.1\|180258_180954_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|183459
NZ_CP045955.1\|WP_080083120.1\|172203_174054_+\|selenocysteine-specific-translation-elongation-factor	unknown	unknown	gnl\|CDD\|182508
NZ_CP045955.1\|WP_000665687.1\|164888_165251_-\|YibL-family-ribosome-associated-protein	unknown	unknown	gnl\|CDD\|182904
NZ_CP045955.1\|WP_000766688.1\|170108_170717_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|182405
NZ_CP045955.1\|WP_000093287.1\|167716_169633_-\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP045955.1\|WP_000200187.1\|170815_172207_+\|L-seryl-tRNA(Sec)-selenium-transferase	unknown	unknown	gnl\|CDD\|235278
NZ_CP045955.1\|WP_000766337.1\|183959_184946_-\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270397
NZ_CP045955.1\|WP_000832316.1\|186237_186711_-\|2,3-diketo-L-gulonate-TRAP-transporter-small-permease-YiaM	unknown	unknown	gnl\|CDD\|182129
NZ_CP045955.1\|WP_080083125.1\|186849_187782_-\|DUF4862-family-protein	unknown	unknown	gnl\|CDD\|374399
NZ_CP045955.1\|WP_080083123.1\|182459_183956_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|212666
NZ_CP045955.1\|WP_001062558.1\|165541_165751_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045955.1\|WP_000193201.1\|165760_166351_-\|MltR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236817
NZ_CP045955.1\|WP_080083121.1\|174301_175183_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP045955.1\|WP_000183988.1\|175351_176890_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143434
NZ_CP045955.1\|WP_000891808.1\|179282_180098_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227095
NZ_CP045955.1\|WP_000645391.1\|166347_167496_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031

Protein	Function_ID	Function_description	E-value
NZ_CP045955.1\|WP_080083122.1\|177063_179019_-\|glycoside-hydrolase-family-127-protein	gnl\|CDD\|226063	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP045955.1\|WP_000301822.1\|184957_186235_-\|2,3-diketo-L-gulonate-transporter-large-permease-YiaN	gnl\|CDD\|185020	PRK15060, PRK15060, 2,3-diketo-L-gulonate transporter large permease YiaN.	0
NZ_CP045955.1\|WP_001244035.1\|180947_181808_-\|L-ribulose-5-phosphate-3-epimerase	gnl\|CDD\|237308	PRK13210, PRK13210, L-ribulose-5-phosphate 3-epimerase.	0
NZ_CP045955.1\|WP_000089535.1\|181800_182463_-\|3-keto-L-gulonate-6-phosphate-decarboxylase-UlaD	gnl\|CDD\|183962	PRK13305, sgbH, 3-keto-L-gulonate-6-phosphate decarboxylase UlaD.	2.07534e-146
NZ_CP045955.1\|WP_000893169.1\|180258_180954_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|183459	PRK12347, sgbE, L-ribulose-5-phosphate 4-epimerase; Reviewed.	5.79699e-177
NZ_CP045955.1\|WP_080083120.1\|172203_174054_+\|selenocysteine-specific-translation-elongation-factor	gnl\|CDD\|182508	PRK10512, PRK10512, selenocysteinyl-tRNA-specific translation factor; Provisional.	0
NZ_CP045955.1\|WP_000665687.1\|164888_165251_-\|YibL-family-ribosome-associated-protein	gnl\|CDD\|182904	PRK11020, PRK11020, YibL family ribosome-associated protein.	7.58636e-60
NZ_CP045955.1\|WP_000766688.1\|170108_170717_+\|glutathione-S-transferase	gnl\|CDD\|182405	PRK10357, PRK10357, putative glutathione S-transferase; Provisional.	9.36931e-154
NZ_CP045955.1\|WP_000093287.1\|167716_169633_-\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP045955.1\|WP_000200187.1\|170815_172207_+\|L-seryl-tRNA(Sec)-selenium-transferase	gnl\|CDD\|235278	PRK04311, PRK04311, selenocysteine synthase; Provisional.	0
NZ_CP045955.1\|WP_000766337.1\|183959_184946_-\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270397	cd13679, PBP2_TRAP_YiaO_like, Substrate-binding domain of 2,3-diketo-L-gulonate-binding Tripartite ATP-independent Periplasmic transport system and related proteins; the type 2 periplasmic-binding protein fold. This subfamily includes the solute receptor protein YiaO of TRAP transport system. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.08134e-150
NZ_CP045955.1\|WP_000832316.1\|186237_186711_-\|2,3-diketo-L-gulonate-TRAP-transporter-small-permease-YiaM	gnl\|CDD\|182129	PRK09877, PRK09877, 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM; Provisional.	1.44312e-98
NZ_CP045955.1\|WP_080083125.1\|186849_187782_-\|DUF4862-family-protein	gnl\|CDD\|374399	pfam16154, DUF4862, Domain of unknown function (DUF4862). This family consists of uncharacterized proteins around 300 residues in length and is mainly found in various high GC Gram+ bacteria, but also in several pathogenic and non-pathogenic enterobacteria (Salmonella, E. coli). Distant homology analysis suggests this could be a branch of Xylose isomerase-like TIM barrel family, but this prediction is currently not confirmed by experiment.	2.39302e-116
NZ_CP045955.1\|WP_080083123.1\|182459_183956_-\|carbohydrate-kinase	gnl\|CDD\|212666	cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of bacterial L-xylulose kinases (L-XK, also known as L-xylulokinase; EC 2.7.1.53), which catalyze the ATP-dependent phosphorylation of L-xylulose to produce L-xylulose 5-phosphate and ADP. The presence of Mg2+ might be required for catalytic activity. Some uncharacterized sequences are also included in this subfamily. L-XKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	0
NZ_CP045955.1\|WP_000193201.1\|165760_166351_-\|MltR-family-transcriptional-regulator	gnl\|CDD\|236817	PRK11001, mtlR, MltR family transcriptional regulator.	1.37879e-106
NZ_CP045955.1\|WP_080083121.1\|174301_175183_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.08069e-77
NZ_CP045955.1\|WP_000183988.1\|175351_176890_+\|aldehyde-dehydrogenase	gnl\|CDD\|143434	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.	0
NZ_CP045955.1\|WP_000891808.1\|179282_180098_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.07375e-21
NZ_CP045955.1\|WP_000645391.1\|166347_167496_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0

>NZ_CP045955.1|WP_000183988.1|175351_176890_+|aldehyde-dehydrogenase
MTNNPPSTRIQPGEYGYPLKLKARYDNFIGGDWVAPADGEYYQNLTPVTGQPLCEVASSGKKDIDLALDAAHKAKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYYLEPTILFGKNNMRVFQEEIFGPVLAVTTFKTMEEALEIANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF
>NZ_CP045955.1|WP_080083121.1|174301_175183_-|ROK-family-protein
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVARCQQDYDIAAIGVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLPLVVENDANCAALGEMWRGAGQHYENMVCITIGTGIGGGIIVGRELYRGAHFHAGEFGVMPVGNNGESMHKIASTSGLMASCRQALALPAEEMPPADVIFERMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGGISEQEKLYPLLTRYLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRS
>NZ_CP045955.1|WP_080083120.1|172203_174054_+|selenocysteine-specific-translation-elongation-factor
MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLQILQLTGNLQLTVALTKADRVDEARIGEVREEVLAALDNYGFTDTVLFVTAANEGRGIAELRAHLQQLPARSHAAQHRFRLAIDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNTPMRVRSLHAQNQPTDHAYAGQRIALNIAGDAEKEQLNRGDWLLSDAPVGEAFSRVIVSLTLHAPLSQWQPLHIHHAASHVTGRVSLLEGGLAELIFDTPLWLADNDRLVLRDISARATLAGARVVTLKAPRRGKRKPDYLHWLSTLAAAQDDSAALAIHLERGAVNLPDFGWARQLNPLGMRQLIEQHGFIQAGDNLLSAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLMLIERMRDDGLIHSHHGWLHLPDHKAGFSDEQQAVWQKVEPLFGDEPWWVRDLAKETGTEEQLMRLVLRQAAQQGIITAIVKDRYYRNDRIVAFANMIRELDQERGSTCAADFRDRLNVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPQKE
>NZ_CP045955.1|WP_000200187.1|170815_172207_+|L-seryl-tRNA(Sec)-selenium-transferase
MTSETRTLYSQLPAIDRLLHDSAFLSLRDRYGHTQVVDLLRRMLDDARDVIRNTQTLPDWYADWAQEAKLRLENAAQSALRPVINLTGTVLHTNLGRALQAQEAIEAVTQAMRAPVTLEYDLDGAGRGHRDRALATLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRQAVNENTGLLMKVHTSNYSIEGFTKTVEEAELAEIGRELDIPVVADLGSGSLVDLSQYGLPKEPMPQQLIAAGVSLVSFSGDKLLGGPQAGIIVGKKAMIAQLQSHPLKRALRADKMTLAALEATLRLYLHPEALAEKLPTLRLLTRSEASIREQAQRLQARLAARYGDEFALEVKPCLSQIGSGSLPVDRLPSAAMTFTPHDGRGSRLEALAARWRMLPVPVIGRIYDGRLWLDMRCLEDESRFMEMMLK
>NZ_CP045955.1|WP_000766688.1|170108_170717_+|glutathione-S-transferase
MKLIGSYTSPFVRKISVLLLEKGITFEFINELPYEANNGVAQYNPLGKVPALVTEKGEYWFDSPIIAEYIELLDIAPAMLPRDPMAALKVRQLEALADGIMDAALVSVREQARPAAQQSETELLRQREKINRSLDMLESYLSDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVSRPHLVKLVETLFQRESFARTEAPKA
>NZ_CP045955.1|WP_000093287.1|167716_169633_-|PTS-mannitol-transporter-subunit-IICBA
MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLLPLLIGYTGGRLVGGERGGVVGAITTMGVIVGADMPMFLGSMIAGPLGGYCIKKFDSWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPAVEVLSKILAAGVNFMVAHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHEMGKSIFFLIEANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILNGGLVSPASPGSILAVLAMTPKGAYFANIAAIVAAMAVSFVVSAILLKTSKVKEEDDIEAATRRMHDMKAESKGASPLAAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKVQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQRHNTNEEKVRDHLKDSFEEGDNNLFKLGAENIFLGRKAANKEEAIRFAGEQLVKGGYVEPEYVEAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGKKA
>NZ_CP045955.1|WP_000645391.1|166347_167496_-|mannitol-1-phosphate-5-dehydrogenase
MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGENEQVDTVSGVNAVSSIGDDVVDLIAHVDLITTAVGPVVLERIAPAIAKGLVKRKAQGVDAPLNIIACENMVRGTTQLKGHVMNALADGDKAWVEQHVGFVDSAVDRIVPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAILDESIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQKILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYGLPHVNLVKGIAAAMHFRSDEDPQAQELAALITEKGPQAALAQISGLDANSDVVAEAVNAYNATK
>NZ_CP045955.1|WP_000193201.1|165760_166351_-|MltR-family-transcriptional-regulator
MTQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNILVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVLSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAALYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK
>NZ_CP045955.1|WP_001062558.1|165541_165751_+|hypothetical-protein
MAKIGENVPLLIDKAVDFMASSQAFREYLNKTPPRDYVPSEVPSESAPIYLQRLEYYRRLYRPKEEERG
>NZ_CP045955.1|WP_000665687.1|164888_165251_-|YibL-family-ribosome-associated-protein
MKEVEKNEIKRLSDRLDAIRHQQAGLSLVESADKYAELEKEKETLEAEIIRLREVHSQKLSKEAQKLMNLPFRRAITKKEQADMGKLKKSVRGLIVVHPMTALGREMGLKEMTGFAKSEF
>NZ_CP045955.1|WP_080083122.1|177063_179019_-|glycoside-hydrolase-family-127-protein
MNVLEVDLHKLTVSDPFLGQYQQLVRDVVIPYQWDALNDRIPEAEPSHAIENFRIAAGQQTGDFYGMVFQDSDVAKWLEAVAWSLCQKPDPALEKTADEVIELVAAAQCDDGYLNTYFTAKAPQERWSNLAECHELYCAGHLIEAGVAFFQATSKRRLLDVVCRLADHIDSTFGPGENQLHGYPGHPEIELALMRLYEVTEQPRYMALASYFIGQRGAQPHFYDEEYEKRGQTSYWHTYGPAWMVKDKAYSQAHLPISQQQTAIGHAVRFVYLMTGVAHLARLSNDEGKRQDCLRLWKNMAQRQLYITGGIGSQSSGESFSSDYDLPNDSVYAESCASIGLMMFARRMLEMEADSQYADVMERALYNTVLGSMALDGKHFFYVNPLEVHPKSLKFNHIYDHVKPIRQRWFGCACCPPNIARVLTSLGHYIYTPRADALYINMYVGNSMEIPVENGALKLRISGNYPWHEQVKIAIDSVQPVRHTLALRLPDWCPEAKVTLNGLDVEQDIRKGYLHIRRTWQEGDTITLTLPMPVRRVYGNPLARHVAGKVAIQRGPLVYCLEQADNGEELHNLWLPKESEFRVFEGKGLFAHKMLIQAEGEKQSAPDAQHQALWHYDNAPSSRQPQTLTFIPWFSWANRGEGEMRIWVNER
>NZ_CP045955.1|WP_000891808.1|179282_180098_+|helix-turn-helix-domain-containing-protein
MLELSITLPIKVQNGGLFISRGIGRHPARRLQSWEIIFVEKGCLKIQEEECVFCVEAGESLLLWPHRRHIGVEEFPADLKFYWLHFEVKAPDSDPRWLTHLSVPQHTQVADPQALIALFRQFMNEQEKHQRSPALEFIVLLILQQLTVDARQNENAEAAGVSLAWKVQQLIRTHYHLPLSSSVLAKELHCNVDYLGRVYRRVFHLTLTEAIHRQRVREAEKLLISDARSLKEVAERCGFNDVGYFRQIFRKHTGLTPTAWKRRYSKEHVNS
>NZ_CP045955.1|WP_000893169.1|180258_180954_-|L-ribulose-5-phosphate-4-epimerase
MLEQLKAEVLAANLALPAHGLVTFTWGNVSAVDETRKLMVIKPSGVEYEVMTADDMVVVEIASGKVVEGHKKPSSDTATHLALYRRYPQIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTVEEINGEYEYQTGEVIIKTFEERGLDPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPDMQPELLDKHYLRKHGANAYYGQ
>NZ_CP045955.1|WP_001244035.1|180947_181808_-|L-ribulose-5-phosphate-3-epimerase
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLEWTSAQRASLVNAMLESGVAIPSMCLSAHRRFPFGSRDEAVRQRAREIMTKAIRLARDLGIRTIQLAGYDVYYEEHDEGTQQRFAEGLAWAVEQAAAAQVMLAVEIMDTAFMNSISKWKKWDEMLSSPWFTVYPDVGNLSAWGNDVTAELKLGIDRIAAIHLKDTLPVTGDSPGQFRDVPFGEGCVDFVGIFKTLHELNYRGSFLIEMWTEKASEPVLEIIQARRWIESRMQEGGFTC
>NZ_CP045955.1|WP_000089535.1|181800_182463_-|3-keto-L-gulonate-6-phosphate-decarboxylase-UlaD
MSRPLLQLALDHTSLEAAQRDVALLQDHVDIVEAGTILCLTEGLSAVKALRAQCPEKIIVADWKVADAGETLAQQAFSAGANWMTIICAAPLATVEKGHAVAQSCGGEIQMELFGNWTLDDARDWYHVGVRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELSITGGITPADLPLFRDINVKAFIAGRALAGAAHPAQVAAEFHAQIDAIWGEKHA
>NZ_CP045955.1|WP_080083123.1|182459_183956_-|carbohydrate-kinase
MSNYWLGLDCGGSWLKAGLYDGAGREVAVQRLPLHALSPQPGWVERDMTELWQQCGSVISKLLAHTGVSGSQIRGLGISAQGKGLFLLDKSDRPLGKAILSSDRRAMEIVQRWQKEAVPQKLYPLTQQTLWTGHPVSLLRWVKENEPQRYAQIGSVMMTHDYLRWCLTGVKGCEESNISESNLYNMATGQYDPRLTEWLDISEIDSALPPVVGSAEICGEITAQAAAITGLAAGTPVVGGLFDVVSTALCAGIEDESTLNAVMGTWAVTSGIAHGLRDHEAHPYVYGRYVNDGQYIVHEASPTSSGNLEWFTAQWGDLSFDEINQAVASLPKAGSDLFFLPFLYGSNAGLEMTCGFYGMQALHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVCALRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYRDFREAQRDLQHPVRTLLPDMTAHALYQRKYRQYQDLIEALQGYHARIKEHAL
>NZ_CP045955.1|WP_000766337.1|183959_184946_-|TRAP-transporter-substrate-binding-protein
MKLHVIARSLLIAGLTVFSVSSLAAQSLRFGYETPQTDSQHIAAKKFNELLKEKTNGELTLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFTGLAPVFNLLDVPFLFRDTAHAHKTLDGKVGDELKKSLDSKGLKVLAYWENGWRDVTNSRAPVKTPGDLKGLKIRTNNSPMNIAAFKIFGANPIPMPFSEVYTGLETRTIDAQEHPINVVWSAKFYEVQKYLSLTHHAYSPLLLVINKAKFDALSPQFQEALLSSAKEAGDYQRKLVAEDQQKIIDGMKEAGVEVLTDIDRKAFSDALGSQVRDMFLKDNPQGADLLKAVDEVQ
>NZ_CP045955.1|WP_000301822.1|184957_186235_-|2,3-diketo-L-gulonate-transporter-large-permease-YiaN
MAVVIFLCCLLGGIAIGLPIAWSLLLCGAALMAYLDMFDVQIMAQTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVIAAMIMASLSGSAVADTAAVAALLVPMMRSANYPINRSVGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGIMMGAALMLTWWWQAGRLNLPSQPKATPREIWQSLVSGIWALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVAVVIYRELTFSSLYHVLVNAAKTTSVVMFLVAAAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMISIMVVGMVMDLTPTVLILTPVLLPLVKEANIDPIYFGVMFIINCSIGLITPPVGNVLNVISGVAKLKFDDAVRGVFPYVVVLMSLLVLFIFIPELIITPLKWIN
>NZ_CP045955.1|WP_000832316.1|186237_186711_-|2,3-diketo-L-gulonate-TRAP-transporter-small-permease-YiaM
MKRVLEGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFVVEKLSPANQRRLSLLTHSLILLLCLALGWGSLQKALQDWSDHSPILGLPIGLMYIACLPTSVAIALIELRRLYHLITRNDSFQQPQQGA
>NZ_CP045955.1|WP_080083125.1|186849_187782_-|DUF4862-family-protein
MKNNTGYIIGAYPCAPSFHQKSEEEETEFWRQLSDTPDIRGLEQPCLEHLHPLGDEWLLRHTPGNWQIVVTAIMETMRRRSENGGFGLASSDEEQRKACVEYYRHLHQKINKINGNNTGKVIALELHAAPLGGNPNVAQATDAFARSLKEIANWDWSCDLVLEHCDAMTGPAPRKGFLPLVNVLETIADYDISVCINWARSAIEGRDTSLPLIHTQQAKQAGKLGALMFSGTTLDGEYGEWQDLHAPFAPFCPQSLMTEKHVKELITAATPELLQFTGIKLLEINASADINHRINILRDGINIMKKATRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045955_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045955_2

942022-943453

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

23 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP045955_2

>merge|NZ_CP045955|2|942022-943453|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGGCCCCCATGTCGCTGGCCGTGGATGTGTCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTGGACGGCCAGCCTGGTAACGATGGACTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGGCGATTTGCCCGCGTTTATCTTGCTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTTGAGTGGGCTGGTGGTGGGAAACTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCCTGTAGTTATTTCATACCGCTTTAGAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTCAGCACACCGGGTGTGCTGGTTTACGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCCTGCTCAGGTGCCGAGAATTGAGGGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTTAGCGCGTTACATCCGGTTTGAGGCTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACATCTCGGCGTCTCGCGTGATGTGGCAGGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAACCAGCAGAGTTAGACGTGTGGCAGTTCGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTACCTGTCAGTTTAGCTTCAGCGATGAAAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACAGCAAACAATTTTGGACGTGTGTTGCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGCGCCAGTTCTTTTTGTTGCCTACCGGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGAGGGGATGGCGCTTAAAGACTGGCAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCACCGCCACTGGACGCGCTGCGTTTTGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATAAGAGCATCCCCGCCATCCGGAGGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAAATGCGATCGGTACTCAACCCGGCCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCGGTTTCGGTGGGGGCTGAATCCTGAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGGACATTCTCGCTAGTCACGGTCATGTCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTCGCAGCCTGGCCTGTTGCCGTAGAATCGGTGTTCCCCTCGCCAGCGGGGATAAACCGAGTTACTGATGCAGACTGCGGATCTTAATCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCGCCAACGACTGGAATTTTTGCGTGTAGCCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP045955|2|1|942022-943392|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCCCCATGTCGCTGGCCGTGGATGTGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTGGACGGCCAGCCTGGTAACGATGGACTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGGCGATTTGCCCGCGTTTATCTTGCTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTTGAGTGGGCTGGTGGTGGGAAACTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCTGTAGTTATTTCATACCGCTTTAGAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTCAGCACACCGGGTGTGCTGGTTTACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCCTGCTCAGGTGCCGAGAATTGAGGGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTAGCGCGTTACATCCGGTTTGAGGCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACATCTCGGCGTCTCGCGTGATGTGGCAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCAGCAGAGTTAGACGTGTGGCAGTTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACCTGTCAGTTTAGCTTCAGCGATGAAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACAGCAAACAATTTTGGACGTGTGTTGCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGCGCCAGTTCTTTTTGTTGCCTACCGGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAGGGGATGGCGCTTAAAGACTGGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCACCGCCACTGGACGCGCTGCGTTTTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATAAGAGCATCCCCGCCATCCGGAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAAATGCGATCGGTACTCAACCCGGCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGGTTTCGGTGGGGGCTGAATCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGACATTCTCGCTAGTCACGGTCATGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCGCAGCCTGGCCTGTTGCCGTAGAATCG
GTGTTCCCCTCGCCAGCGGGGATAAACCG	AGTTACTGATGCAGACTGCGGATCTTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP045955|2|2|942022-943453|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCCCCATGTCGCTGGCCGTGGATGTGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTGGACGGCCAGCCTGGTAACGATGGACTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGGCGATTTGCCCGCGTTTATCTTGCTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTTGAGTGGGCTGGTGGTGGGAAACTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCTGTAGTTATTTCATACCGCTTTAGAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTCAGCACACCGGGTGTGCTGGTTTACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCCTGCTCAGGTGCCGAGAATTGAGGGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTAGCGCGTTACATCCGGTTTGAGGCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACATCTCGGCGTCTCGCGTGATGTGGCAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCAGCAGAGTTAGACGTGTGGCAGTTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACCTGTCAGTTTAGCTTCAGCGATGAAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACAGCAAACAATTTTGGACGTGTGTTGCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGCGCCAGTTCTTTTTGTTGCCTACCGGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAGGGGATGGCGCTTAAAGACTGGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCACCGCCACTGGACGCGCTGCGTTTTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATAAGAGCATCCCCGCCATCCGGAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAAATGCGATCGGTACTCAACCCGGCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGGTTTCGGTGGGGGCTGAATCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGACATTCTCGCTAGTCACGGTCATGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCGCAGCCTGGCCTGTTGCCGTAGAATCG
GTGTTCCCCTCGCCAGCGGGGATAAACCG	AGTTACTGATGCAGACTGCGGATCTTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP045955|2|1|942022-943453|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCCCCATGTCGCTGGCCGTGGATGTGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTGGACGGCCAGCCTGGTAACGATGGACTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGGCGATTTGCCCGCGTTTATCTTGCTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCTTGAGTGGGCTGGTGGTGGGAAACTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCTGTAGTTATTTCATACCGCTTTAGAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTCAGCACACCGGGTGTGCTGGTTTACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCCTGCTCAGGTGCCGAGAATTGAGGGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTAGCGCGTTACATCCGGTTTGAGGCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACATCTCGGCGTCTCGCGTGATGTGGCAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCAGCAGAGTTAGACGTGTGGCAGTTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACCTGTCAGTTTAGCTTCAGCGATGAAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACAGCAAACAATTTTGGACGTGTGTTGCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGCGCCAGTTCTTTTTGTTGCCTACCGGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAGGGGATGGCGCTTAAAGACTGGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCACCGCCACTGGACGCGCTGCGTTTTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATAAGAGCATCCCCGCCATCCGGAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAAATGCGATCGGTACTCAACCCGGCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCGGTTTCGGTGGGGGCTGAATCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGACATTCTCGCTAGTCACGGTCATGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCGCAGCCTGGCCTGTTGCCGTAGAATCG
GTGTTCCCCTCGCCAGCGGGGATAAACCG	AGTTACTGATGCAGACTGCGGATCTTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045955.1\|WP_080083321.1\|947031_948744_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP045955.1\|WP_023250014.1\|943550_944348_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP045955.1\|WP_000368579.1\|953838_955395_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP045955.1\|WP_000080403.1\|948819_949554_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045955.1\|WP_077908752.1\|932894_935594_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP045955.1\|WP_000108313.1\|944434_944797_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP045955.1\|WP_000832395.1\|931097_931568_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP045955.1\|WP_001044459.1\|932108_932882_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP045955.1\|WP_080083320.1\|951163_953827_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP045955.1\|WP_000210859.1\|937899_939537_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP045955.1\|WP_000117944.1\|955391_955952_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045955.1\|WP_154074462.1\|955965_957024_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP045955.1\|WP_080083322.1\|945232_947032_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP045955.1\|WP_000842512.1\|935673_936261_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP045955.1\|WP_000036734.1\|939619_940918_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP045955.1\|WP_001199961.1\|941053_941725_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP045955.1\|WP_000210451.1\|936871_937672_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP045955.1\|WP_079951085.1\|949766_950720_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP045955.1\|WP_001079648.1\|930564_931101_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP045955.1\|WP_000178267.1\|931582_932089_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178

Protein	Function_ID	Function_description	E-value
NZ_CP045955.1\|WP_080083321.1\|947031_948744_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP045955.1\|WP_023250014.1\|943550_944348_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.45281e-101
NZ_CP045955.1\|WP_000368579.1\|953838_955395_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP045955.1\|WP_000080403.1\|948819_949554_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.47943e-138
NZ_CP045955.1\|WP_077908752.1\|932894_935594_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP045955.1\|WP_000108313.1\|944434_944797_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP045955.1\|WP_000832395.1\|931097_931568_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.31755e-98
NZ_CP045955.1\|WP_001044459.1\|932108_932882_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP045955.1\|WP_080083320.1\|951163_953827_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP045955.1\|WP_000210859.1\|937899_939537_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP045955.1\|WP_000117944.1\|955391_955952_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.5399e-34
NZ_CP045955.1\|WP_154074462.1\|955965_957024_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.13243e-139
NZ_CP045955.1\|WP_080083322.1\|945232_947032_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP045955.1\|WP_000842512.1\|935673_936261_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_CP045955.1\|WP_000036734.1\|939619_940918_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP045955.1\|WP_001199961.1\|941053_941725_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP045955.1\|WP_000210451.1\|936871_937672_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP045955.1\|WP_079951085.1\|949766_950720_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP045955.1\|WP_001079648.1\|930564_931101_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.25472e-123
NZ_CP045955.1\|WP_000178267.1\|931582_932089_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	7.03659e-105

>NZ_CP045955.1|WP_001199961.1|941053_941725_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP045955.1|WP_000036734.1|939619_940918_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP045955.1|WP_000210859.1|937899_939537_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRNEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP045955.1|WP_000210451.1|936871_937672_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP045955.1|WP_000842512.1|935673_936261_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP045955.1|WP_077908752.1|932894_935594_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKILEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP045955.1|WP_001044459.1|932108_932882_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP045955.1|WP_000178267.1|931582_932089_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP045955.1|WP_000832395.1|931097_931568_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTSVPELGIELQQNGTVFPPGTSLTINESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP045955.1|WP_001079648.1|930564_931101_-|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETVAQQRLDINAVQGTAFMLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ
>NZ_CP045955.1|WP_023250014.1|943550_944348_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGTGADKSLKARPGLSLLVEDESTSVLFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGKNFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYLSTKGLVIITGCGHRGIANIVRHCQNITGIKQIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP045955.1|WP_000108313.1|944434_944797_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP045955.1|WP_080083322.1|945232_947032_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPDLVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIIENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGTHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP045955.1|WP_080083321.1|947031_948744_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP045955.1|WP_000080403.1|948819_949554_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDIHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP045955.1|WP_079951085.1|949766_950720_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNTQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP045955.1|WP_080083320.1|951163_953827_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSADDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP045955.1|WP_000368579.1|953838_955395_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPIWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIRGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP045955.1|WP_000117944.1|955391_955952_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHDELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP045955.1|WP_154074462.1|955965_957024_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGICTGRIAREAAQILVDSGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045955_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045955_3

959720-960175

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

7 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP045955_3

>merge|NZ_CP045955|3|959720-960175|CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCTCGCCAATACGCGGAAAACTGTCAGCGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCAGAAAGTCACAAATGCGAGGAGTCAGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAACGACAATAAAGCATGTGGCAATTGCGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGGCAAATTCATCCGCCGCTGACCACTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGACGCTTACATCTCACCGAGAGATTTTGAGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTATCCCGAAATCACGTTCAAGAAAAATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGGGTTGCATAGATGACACGCTTATAAATAGTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP045955|3|3|959720-960175|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTCGCCAATACGCGGAAAACTGTCAGCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCAGAAAGTCACAAATGCGAGGAGTCAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAACGACAATAAAGCATGTGGCAATTGCGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGGCAAATTCATCCGCCGCTGACCACTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCTTACATCTCACCGAGAGATTTTGAGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTATCCCGAAATCACGTTCAAGAAAAATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGGGTTGCATAGATGACACGCTTATAAATA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP045955|3|2|959720-960175|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTCGCCAATACGCGGAAAACTGTCAGCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCAGAAAGTCACAAATGCGAGGAGTCAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAACGACAATAAAGCATGTGGCAATTGCGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGGCAAATTCATCCGCCGCTGACCACTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCTTACATCTCACCGAGAGATTTTGAGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTATCCCGAAATCACGTTCAAGAAAAATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGGGTTGCATAGATGACACGCTTATAAATA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045955.1\|WP_001221538.1\|967546_968308_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP045955.1\|WP_001118109.1\|964453_964810_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP045955.1\|WP_154074462.1\|955965_957024_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP045955.1\|WP_000080403.1\|948819_949554_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045955.1\|WP_001518648.1\|959329_959623_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP045955.1\|WP_000368579.1\|953838_955395_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP045955.1\|WP_001219244.1\|966040_966520_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP045955.1\|WP_000134246.1\|966516_967566_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP045955.1\|WP_000144833.1\|958409_959330_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP045955.1\|WP_080083319.1\|957762_958413_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP045955.1\|WP_001092256.1\|962404_963844_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP045955.1\|WP_001173663.1\|963830_964436_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP045955.1\|WP_154074463.1\|965330_966041_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP045955.1\|WP_000117944.1\|955391_955952_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045955.1\|WP_000085105.1\|957034_957781_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP045955.1\|WP_000372384.1\|961486_962395_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP045955.1\|WP_080083320.1\|951163_953827_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP045955.1\|WP_079951085.1\|949766_950720_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP045955.1\|WP_000490481.1\|960189_961236_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP045955.1\|WP_000517480.1\|965000_965312_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
NZ_CP045955.1\|WP_001221538.1\|967546_968308_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP045955.1\|WP_001118109.1\|964453_964810_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP045955.1\|WP_154074462.1\|955965_957024_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.13243e-139
NZ_CP045955.1\|WP_000080403.1\|948819_949554_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.47943e-138
NZ_CP045955.1\|WP_001518648.1\|959329_959623_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP045955.1\|WP_000368579.1\|953838_955395_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP045955.1\|WP_001219244.1\|966040_966520_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP045955.1\|WP_000134246.1\|966516_967566_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP045955.1\|WP_000144833.1\|958409_959330_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.64033e-157
NZ_CP045955.1\|WP_080083319.1\|957762_958413_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	2.80634e-75
NZ_CP045955.1\|WP_001092256.1\|962404_963844_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP045955.1\|WP_001173663.1\|963830_964436_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP045955.1\|WP_154074463.1\|965330_966041_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.02994e-117
NZ_CP045955.1\|WP_000117944.1\|955391_955952_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.5399e-34
NZ_CP045955.1\|WP_000085105.1\|957034_957781_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.80035e-48
NZ_CP045955.1\|WP_000372384.1\|961486_962395_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP045955.1\|WP_080083320.1\|951163_953827_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP045955.1\|WP_079951085.1\|949766_950720_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP045955.1\|WP_000490481.1\|960189_961236_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP045955.1\|WP_000517480.1\|965000_965312_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64

>NZ_CP045955.1|WP_001518648.1|959329_959623_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP045955.1|WP_000144833.1|958409_959330_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP045955.1|WP_080083319.1|957762_958413_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLHETSVDAYRQQQIRREKSRQMIQFSSVDYTGVLVLNDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP045955.1|WP_000085105.1|957034_957781_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP045955.1|WP_154074462.1|955965_957024_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGICTGRIAREAAQILVDSGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA
>NZ_CP045955.1|WP_000117944.1|955391_955952_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHDELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP045955.1|WP_000368579.1|953838_955395_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPIWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIRGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP045955.1|WP_080083320.1|951163_953827_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSADDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP045955.1|WP_079951085.1|949766_950720_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNTQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP045955.1|WP_000080403.1|948819_949554_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDIHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP045955.1|WP_000490481.1|960189_961236_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP045955.1|WP_000372384.1|961486_962395_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP045955.1|WP_001092256.1|962404_963844_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP045955.1|WP_001173663.1|963830_964436_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP045955.1|WP_001118109.1|964453_964810_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP045955.1|WP_000517480.1|965000_965312_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP045955.1|WP_154074463.1|965330_966041_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISLGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP045955.1|WP_001219244.1|966040_966520_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP045955.1|WP_000134246.1|966516_967566_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP045955.1|WP_001221538.1|967546_968308_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045955_3	3.2\|959810\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959810-959841	32	MT774487	Salmonella phage MG40, complete genome	22980-23011	1	0.969
NZ_CP045955_2	2.13\|942783\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942783-942814	32	CP051279	Salmonella phage ST-35, complete genome	20475-20506	2	0.938
NZ_CP045955_3	3.2\|959810\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959810-959841	32	MH370364	Salmonella phage S107, complete genome	32325-32356	2	0.938
NZ_CP045955_3	3.2\|959810\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959810-959841	32	MH370382	Salmonella phage S135, complete genome	32325-32356	2	0.938
NZ_CP045955_3	3.2\|959810\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959810-959841	32	MH370383	Salmonella phage S137, complete genome	32325-32356	2	0.938
NZ_CP045955_1	1.1\|176934\|30\|NZ_CP045955\|CRISPRCasFinder	176934-176963	30	NZ_CP019064	Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence	25629-25658	8	0.733
NZ_CP045955_2	2.1\|942051\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942051-942082	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	690380-690411	8	0.75
NZ_CP045955_2	2.10\|942600\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942600-942631	32	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	1053568-1053599	8	0.75
NZ_CP045955_2	2.10\|942600\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942600-942631	32	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	187310-187341	8	0.75
NZ_CP045955_2	2.21\|943271\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	943271-943302	32	MN694003	Marine virus AFVG_250M677, complete genome	17629-17660	8	0.75
NZ_CP045955_3	3.6\|960054\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	960054-960085	32	NC_028822	Escherichia phage P483, complete genome	30080-30111	8	0.75
NZ_CP045955_2	2.10\|942600\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942600-942631	32	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	1013675-1013706	9	0.719
NZ_CP045955_2	2.10\|942600\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942600-942631	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	908056-908087	9	0.719
NZ_CP045955_2	2.10\|942600\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942600-942631	32	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	1013675-1013706	9	0.719
NZ_CP045955_2	2.10\|942600\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942600-942631	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	96174-96205	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	1110663-1110694	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	354618-354649	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	410546-410577	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	1209182-1209213	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	366636-366667	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	735009-735040	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1062569-1062600	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	818812-818843	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	942463-942494	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	640478-640509	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	269716-269747	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	1534531-1534562	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	795586-795617	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	543422-543453	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	327910-327941	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	142724-142755	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	301775-301806	9	0.719
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	354279-354310	9	0.719
NZ_CP045955_3	3.3\|959871\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959871-959902	32	NC_010632	Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence	56615-56646	9	0.719
NZ_CP045955_3	3.6\|960054\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	960054-960085	32	KM507819	Escherichia phage 121Q, complete genome	157384-157415	9	0.719
NZ_CP045955_3	3.7\|960115\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	960115-960146	32	NZ_MG266000	Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence	5501-5532	9	0.719
NZ_CP045955_2	2.1\|942051\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942051-942082	32	NZ_CP049908	Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence	80884-80915	10	0.688
NZ_CP045955_2	2.1\|942051\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942051-942082	32	NZ_CP037921	Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence	182378-182409	10	0.688
NZ_CP045955_3	3.1\|959749\|32\|NZ_CP045955\|CRISPRCasFinder,CRT	959749-959780	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	456439-456470	10	0.688
NZ_CP045955_2	2.1\|942051\|32\|NZ_CP045955\|PILER-CR,CRISPRCasFinder,CRT	942051-942082	32	NZ_CP049038	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_1, complete sequence	139191-139222	11	0.656

1. spacer 3.2|959810|32|NZ_CP045955|CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 1, identity: 0.969

agccagaaagtcacaaatgcgaggagtcagcc	CRISPR spacer
atccagaaagtcacaaatgcgaggagtcagcc	Protospacer
* ******************************

2. spacer 2.13|942783|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to CP051279 (Salmonella phage ST-35, complete genome) position: , mismatch: 2, identity: 0.938

tcacagcaaacaattttggacgtgtgttgcgg	CRISPR spacer
tcacagcaaacaattttggacatgtgctgcgg	Protospacer
*********************.****.*****

3. spacer 3.2|959810|32|NZ_CP045955|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 2, identity: 0.938

agccagaaagtcacaaatgcgaggagtcagcc	CRISPR spacer
atccagaaagtcacaaatgcgaggagtcagac	Protospacer
* **************************** *

4. spacer 3.2|959810|32|NZ_CP045955|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 2, identity: 0.938

agccagaaagtcacaaatgcgaggagtcagcc	CRISPR spacer
atccagaaagtcacaaatgcgaggagtcagac	Protospacer
* **************************** *

5. spacer 3.2|959810|32|NZ_CP045955|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 2, identity: 0.938

agccagaaagtcacaaatgcgaggagtcagcc	CRISPR spacer
atccagaaagtcacaaatgcgaggagtcagac	Protospacer
* **************************** *

6. spacer 1.1|176934|30|NZ_CP045955|CRISPRCasFinder matches to NZ_CP019064 (Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

cgcattgatatcagcctggtggtaatgtct	CRISPR spacer
gttgtcaatatcagcctgttggtaatatct	Protospacer
  ..*..*********** *******.***

7. spacer 2.1|942051|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ggcccccatgtcgctggccgtggatgtgtcgg	CRISPR spacer
cgtcgtccggtcaccggccgtggatgtgtcgg	Protospacer
 *.* .*  ***.*.*****************

8. spacer 2.10|942600|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 8, identity: 0.75

acatctcggcgtctcgcgtgatgtggcaggcg	CRISPR spacer
acatttcggcgtctcgcctgatgttctcgtct	Protospacer
****.************ ******  . * *

9. spacer 2.10|942600|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.75

acatctcggcgtctcgcgtgatgtggcaggcg	CRISPR spacer
acatttcggcgtctcgcctgatgttctcgtct	Protospacer
****.************ ******  . * *

10. spacer 2.21|943271|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to MN694003 (Marine virus AFVG_250M677, complete genome) position: , mismatch: 8, identity: 0.75

cggtcgcagcctggcctgttgccgtagaatcg	CRISPR spacer
cgatcgcagcctgggctgttgccgtgctcgcc	Protospacer
**.*********** **********.    *

11. spacer 3.6|960054|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_028822 (Escherichia phage P483, complete genome) position: , mismatch: 8, identity: 0.75

gcgtatc-ccgaaatcacgttcaagaaaaatcc	CRISPR spacer
-tccatcatggaaatcacattcaagacaaatcc	Protospacer
 . .*** . ********.******* ******

12. spacer 2.10|942600|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 9, identity: 0.719

acatctcggcgtctcgcgtgatgtggcaggcg	CRISPR spacer
gcatttcggcgtctcgcctgatgttctcgtct	Protospacer
.***.************ ******  . * *

13. spacer 2.10|942600|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.719

acatctcggcgtctcgcgtgatgtggcaggcg	CRISPR spacer
gcatttcggcgtctcgcctgatgttctcgtct	Protospacer
.***.************ ******  . * *

14. spacer 2.10|942600|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 9, identity: 0.719

acatctcggcgtctcgcgtgatgtggcaggcg	CRISPR spacer
gcatttcggcgtctcgcctgatgttctcgtct	Protospacer
.***.************ ******  . * *

15. spacer 2.10|942600|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 9, identity: 0.719

acatctcggcgtctcgcgtgatgtggcaggcg	CRISPR spacer
ctcgctctgcggctcgcgtgatgtggccgatg	Protospacer
 .  *** *** *************** *..*

16. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

17. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

18. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

19. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

20. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

21. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

22. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

23. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

24. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

25. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

26. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

27. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

28. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

29. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

30. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

31. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

32. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

33. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.719

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
cgctcgccgataagcggaaaactgcgaatact	Protospacer
********.*** ***********. *....

34. spacer 3.3|959871|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NC_010632 (Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgacaataaagcatgtggcaattgcgccg	CRISPR spacer
ccacgacaataaagcaattggcaatagttgca	Protospacer
  **************  ******* *.  *.

35. spacer 3.6|960054|32|NZ_CP045955|CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.719

gcgtatcccgaaatcacgttcaagaaaaatcc	CRISPR spacer
ctgcactgagaaatcaagttcaagaaaaaacc	Protospacer
 .*.*..  ******* ************ **

36. spacer 3.7|960115|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 9, identity: 0.719

gttgggttgcatagatgacacgcttataaata	CRISPR spacer
gaattatggcatagatgacatgattataaatt	Protospacer
*    .* ************.* ********

37. spacer 2.1|942051|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049908 (Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcccccatgtcgctggccgtggatgtgtcgg	CRISPR spacer
ggcccccgtgccgctggccgtggtccacgaga	Protospacer
*******.**.************ .     *.

38. spacer 2.1|942051|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037921 (Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcccccatgtcgctggccgtggatgtgtcgg	CRISPR spacer
ggcccccgtgccgctggccgtggtccacgaga	Protospacer
*******.**.************ .     *.

39. spacer 3.1|959749|32|NZ_CP045955|CRISPRCasFinder,CRT matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

cgctcgccaatacgcggaaaactgtcagcgta	CRISPR spacer
ggctcgccgataagcggaaaactgcgaatact	Protospacer
 *******.*** ***********. *....

40. spacer 2.1|942051|32|NZ_CP045955|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049038 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_1, complete sequence) position: , mismatch: 11, identity: 0.656

ggcccccatgtcgctggccgtggatgtgtcgg	CRISPR spacer
cagggccatgtagctggccgcggatgtggtct	Protospacer
 .   ****** ********.******* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1121479 : 1215180

Salmonella_phage(78.26%)

plate,tRNA,integrase,tail,head,capsid,lysis,portal,transposase

attL 1105848:1105866|attR 1150036:1150054

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1105848:1105866	attL	NA	NA	NA	NA
WP_089113803.1\|1121479_1122590_+\|transposase	IS3-like element IS1351 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	7.6e-07	25.6
WP_000445376.1\|1123386_1124190_-	DUF3800 domain-containing protein	Q19UP3	Mannheimia_phage	1.2e-62	44.7
WP_001142974.1\|1124588_1125182_-	hypothetical protein	NA	NA	NA	NA
WP_001585446.1\|1125441_1126467_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	4.0e-196	95.9
WP_001749755.1\|1126470_1127103_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.5e-63	56.7
WP_023225961.1\|1127222_1127471_+	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	8.9e-25	70.7
WP_001749756.1\|1127503_1128013_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	3.5e-84	93.5
WP_000957775.1\|1128020_1128254_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	3.6e-12	59.1
WP_000166366.1\|1128201_1128660_-	hypothetical protein	NA	NA	NA	NA
WP_000963195.1\|1128879_1129221_+	hypothetical protein	E5G6L5	Salmonella_phage	4.2e-49	85.0
WP_001244234.1\|1129288_1129522_+	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	2.0e-26	84.4
WP_154074470.1\|1129521_1129749_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.9e-34	92.0
WP_001749757.1\|1129745_1130603_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.7e-129	80.4
WP_154074471.1\|1130593_1133005_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	96.0
WP_001154444.1\|1133159_1133348_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.7e-26	100.0
WP_023225963.1\|1133359_1133593_+	DinI family protein	A0A1S6L014	Salmonella_phage	2.8e-36	98.7
WP_023238320.1\|1133721_1134462_-	DUF4145 domain-containing protein	A0A1S6L018	Salmonella_phage	1.7e-143	99.6
WP_023260023.1\|1134820_1135066_+	hypothetical protein	NA	NA	NA	NA
WP_080160387.1\|1135075_1135933_+	hypothetical protein	NA	NA	NA	NA
WP_080160388.1\|1135954_1136986_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.3e-182	91.0
WP_154074472.1\|1136985_1138752_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	98.8
WP_080068599.1\|1138894_1139728_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.9e-128	88.8
WP_080160390.1\|1139744_1140809_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.7e-195	98.9
WP_154074473.1\|1140812_1141463_+	hypothetical protein	E5G6M7	Salmonella_phage	1.6e-113	98.6
WP_010835209.1\|1141556_1142021_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.4e-85	98.7
WP_000868184.1\|1142020_1142224_+\|tail	tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
WP_000171565.1\|1142227_1142443_+	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
WP_001069921.1\|1142423_1142939_+	lysozyme	E5G6N1	Salmonella_phage	1.2e-95	99.4
WP_080157480.1\|1142935_1143364_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	4.1e-62	92.9
WP_001039945.1\|1143459_1143891_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	4.4e-72	94.4
WP_080068853.1\|1143883_1144330_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.4e-60	82.4
WP_154074474.1\|1144355_1145207_-	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_065348317.1\|1145199_1146459_-	AAA family ATPase	NA	NA	NA	NA
WP_140236981.1\|1146559_1147138_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	2.6e-107	97.9
WP_154074475.1\|1147134_1147494_+\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	1.0e-58	97.5
WP_000268332.1\|1147480_1148389_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	5.4e-160	100.0
WP_154074476.1\|1148381_1148987_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	7.0e-116	98.0
WP_000680167.1\|1150752_1151280_+\|tail	tail protein	NA	NA	NA	NA
1150036:1150054	attR	NA	NA	NA	NA
WP_154074477.1\|1151410_1152583_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.7e-222	99.5
WP_001207652.1\|1152592_1153108_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	7.9e-92	98.8
WP_001280962.1\|1153162_1153465_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	2.5e-45	100.0
WP_000763316.1\|1153479_1153599_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
WP_154074478.1\|1153591_1156399_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	99.1
WP_154074479.1\|1156395_1156881_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.1e-66	98.5
WP_154074480.1\|1156877_1157978_+	phage late control D family protein	E5G6Q3	Salmonella_phage	6.2e-195	97.3
WP_000980498.1\|1158046_1158265_+	hypothetical protein	Q53ZE7	Salmonella_virus	2.1e-38	100.0
WP_072095627.1\|1158816_1159980_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_000196151.1\|1159987_1162168_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_080083562.1\|1162164_1163574_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_154074481.1\|1163638_1175113_-	biofilm-associated protein BapA	NA	NA	NA	NA
WP_001518569.1\|1175732_1176215_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_000242603.1\|1176364_1176841_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001112990.1\|1176830_1177121_+	RnfH family protein	NA	NA	NA	NA
WP_001203445.1\|1177286_1177625_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001525072.1\|1177773_1179435_-	DNA repair protein RecN	NA	NA	NA	NA
WP_080083560.1\|1179520_1180399_-	NAD(+) kinase	NA	NA	NA	NA
WP_001518875.1\|1180521_1181112_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001287931.1\|1181146_1181752_-	hypothetical protein	NA	NA	NA	NA
WP_127172650.1\|1181872_1183159_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001537507.1\|1183178_1183970_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_000460052.1\|1184135_1185497_+	signal recognition particle protein	NA	NA	NA	NA
WP_000256453.1\|1185810_1186059_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_000043266.1\|1186077_1186626_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000469807.1\|1186670_1187438_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000065257.1\|1187478_1187826_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_001212379.1\|1189195_1189714_-	YfiR family protein	NA	NA	NA	NA
WP_001168062.1\|1190153_1191224_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_000225188.1\|1191233_1192355_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_000632386.1\|1192412_1193321_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000200080.1\|1193281_1194442_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_010989056.1\|1194541_1194589_-	hypothetical protein	NA	NA	NA	NA
WP_000178449.1\|1194692_1195031_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_000197660.1\|1195302_1196040_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000079130.1\|1196171_1197152_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000992639.1\|1197148_1197880_+	polyphenol oxidase	NA	NA	NA	NA
WP_001235092.1\|1198009_1200583_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
WP_000985653.1\|1206357_1206813_+	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.0e-34	50.0
WP_079899153.1\|1206916_1208218_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.4e-43	30.1
WP_001264473.1\|1208214_1208538_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_000949286.1\|1208582_1209938_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_080083455.1\|1210052_1212713_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000183642.1\|1212766_1213447_-	DTW domain-containing protein	NA	NA	NA	NA
WP_001098732.1\|1213519_1213939_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
WP_000997368.1\|1214142_1215180_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_2

1690855 : 1700026

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569168.1\|1690855_1691803_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.8e-10	27.8
WP_079820938.1\|1691786_1692518_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1692498_1692606_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1692665_1693397_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1693619_1695305_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1695301_1696021_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1696067_1696535_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001197951.1\|1696591_1697122_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1697293_1697752_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_000195332.1\|1697992_1700026_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_3

1767223 : 1777730

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001144951.1\|1767223_1768627_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.0e-21	26.5
WP_000981469.1\|1768804_1769698_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697846.1\|1770074_1771160_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
WP_001023658.1\|1771159_1772059_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
WP_000857535.1\|1772106_1772985_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-108	65.5
WP_000973709.1\|1772985_1773537_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.0
WP_000018223.1\|1773542_1774517_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648783.1\|1774532_1775306_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565913.1\|1775310_1776390_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
WP_000126349.1\|1776416_1777730_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_4

2583456 : 2673089

Escherichia_phage(25.53%)

tRNA,integrase,tail,terminase,protease,holin,portal,lysis

attL 2624023:2624045|attR 2670858:2670880

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001221014.1\|2583456_2584152_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_000128807.1\|2584209_2586120_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	4.5e-92	32.7
WP_000029550.1\|2586251_2586596_+	RidA family protein	NA	NA	NA	NA
WP_000457328.1\|2586601_2586781_-	YoaH family protein	NA	NA	NA	NA
WP_079798329.1\|2586861_2588226_+	aminodeoxychorismate synthase component 1	A0A0B5J984	Pandoravirus	1.5e-44	35.3
WP_000381531.1\|2588229_2588808_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_000624277.1\|2589071_2590436_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_080083509.1\|2590573_2592175_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_000421815.1\|2592196_2593756_-	CNNM family cation transport protein YoaE	A0A0R6PEZ3	Moraxella_phage	9.5e-40	44.4
WP_000150521.1\|2594228_2595197_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_000406918.1\|2595249_2596050_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_001518647.1\|2596062_2596914_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
WP_000156274.1\|2596971_2597430_+	DUF986 domain-containing protein	NA	NA	NA	NA
WP_001518359.1\|2597839_2598406_+	manganese efflux pump MntP	NA	NA	NA	NA
WP_080083508.1\|2598402_2599212_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_000730322.1\|2599277_2601023_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA
WP_001062678.1\|2601242_2601452_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
WP_001537930.1\|2601464_2601608_-	YobF family protein	NA	NA	NA	NA
WP_001000660.1\|2602256_2602544_-	hypothetical protein	NA	NA	NA	NA
WP_000714547.1\|2602614_2602758_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
WP_001236777.1\|2602915_2603155_+	hypothetical protein	NA	NA	NA	NA
WP_001262195.1\|2603366_2604158_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_000416128.1\|2604333_2605707_+	MFS transporter	NA	NA	NA	NA
WP_000984498.1\|2605754_2606636_-\|protease	protease HtpX	NA	NA	NA	NA
WP_080083507.1\|2606829_2608878_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
WP_000431401.1\|2608897_2609584_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_000145727.1\|2609681_2610266_-	GAF domain-containing protein	NA	NA	NA	NA
WP_001207294.1\|2610307_2611591_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001535256.1\|2611559_2614193_+	PqiB family protein	NA	NA	NA	NA
WP_001670762.1\|2614270_2615710_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_000978523.1\|2615824_2616064_+	YebV family protein	NA	NA	NA	NA
WP_000457836.1\|2616174_2616366_+	YebW family protein	NA	NA	NA	NA
WP_080083506.1\|2616384_2617035_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.2e-58	50.9
WP_001134856.1\|2617258_2617423_-	membrane protein	NA	NA	NA	NA
WP_080083505.1\|2617707_2618430_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
WP_000422890.1\|2619113_2619509_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	8.3e-17	33.6
WP_000030946.1\|2619838_2620315_+	hypothetical protein	NA	NA	NA	NA
WP_000354407.1\|2620701_2621121_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001752421.1\|2621490_2621760_+	hypothetical protein	Q6UAV5	Klebsiella_phage	1.5e-06	39.0
WP_001617922.1\|2621925_2622066_+	hypothetical protein	NA	NA	NA	NA
2624023:2624045	attL	NA	NA	NA	NA
WP_001233445.1\|2625192_2626107_+	DMT family transporter	NA	NA	NA	NA
WP_000480735.1\|2626239_2626398_+	hypothetical protein	NA	NA	NA	NA
WP_000848069.1\|2626407_2627022_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_001574229.1\|2628169_2628295_-	hypothetical protein	NA	NA	NA	NA
WP_001751604.1\|2628863_2629064_+	hypothetical protein	NA	NA	NA	NA
WP_001034748.1\|2630513_2630702_+	hypothetical protein	NA	NA	NA	NA
WP_000789530.1\|2630766_2630934_+	lytic enzyme	NA	NA	NA	NA
WP_001013467.1\|2631710_2631941_-	hypothetical protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
WP_072101013.1\|2632130_2632625_+	RecE	A0A0U2I1R6	Escherichia_phage	1.1e-21	68.9
WP_139770496.1\|2632684_2633539_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	7.2e-74	51.2
WP_001536069.1\|2634483_2635284_+	hypothetical protein	NA	NA	NA	NA
WP_000161704.1\|2635763_2636486_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA
WP_000143175.1\|2636681_2637257_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.4e-96	90.5
WP_154074522.1\|2637256_2639455_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	3.0e-87	53.7
WP_000178851.1\|2639508_2639751_-	hypothetical protein	NA	NA	NA	NA
WP_077911794.1\|2639789_2640665_-	DUF1983 domain-containing protein	K7PKJ2	Enterobacteria_phage	1.5e-50	79.7
WP_001576012.1\|2643211_2643916_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.4e-67	63.1
WP_023205988.1\|2643813_2644551_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.2e-114	76.1
WP_023205989.1\|2644560_2645256_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.7e-89	66.7
WP_000877926.1\|2645345_2645879_+	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_000725267.1\|2645995_2646493_-	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000978295.1\|2646591_2646924_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.6e-35	61.5
WP_080083498.1\|2646920_2649908_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.5e-264	61.8
WP_010989009.1\|2649987_2650317_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
WP_000478858.1\|2650313_2650712_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
WP_023205991.1\|2650757_2651507_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	5.3e-89	68.2
WP_000196703.1\|2651518_2651920_-\|tail	tail protein	K7PHM6	Enterobacterial_phage	2.0e-42	60.9
WP_000453194.1\|2651916_2652483_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
WP_000774239.1\|2652463_2652763_-	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
WP_001107908.1\|2652755_2653079_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
WP_010989008.1\|2653169_2655251_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
WP_077679777.1\|2655174_2656692_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.5e-175	65.1
WP_000196190.1\|2656718_2656925_-	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
WP_000989241.1\|2656921_2659060_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
WP_000371784.1\|2659016_2659550_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
WP_001541990.1\|2659757_2660237_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
WP_000984586.1\|2660254_2660707_-	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
WP_001574216.1\|2660690_2661020_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001574215.1\|2661295_2661982_+	PipA/GogA/GtgA family type III secretion system effector	Q9MBM0	Phage_Gifsy-2	1.8e-131	99.6
WP_000798706.1\|2662342_2662792_+	lipoprotein	NA	NA	NA	NA
WP_080083499.1\|2663165_2663690_-	hypothetical protein	NA	NA	NA	NA
WP_001097218.1\|2663786_2664476_-	antitermination protein	I6PDF8	Cronobacter_phage	2.1e-60	54.9
WP_000784710.1\|2664605_2664833_-	DNA breaking-rejoining protein	A0A0M4RU10	Salmonella_phage	2.2e-14	66.7
WP_000940756.1\|2664829_2665429_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	3.6e-96	82.9
WP_000911592.1\|2665492_2665741_-	hypothetical protein	NA	NA	NA	NA
WP_001597144.1\|2665992_2666148_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-14	84.3
WP_000687975.1\|2666351_2666624_-	hypothetical protein	NA	NA	NA	NA
WP_000089421.1\|2666620_2667016_-	DUF977 family protein	A0A088CBK9	Shigella_phage	1.7e-17	38.1
WP_000140163.1\|2667030_2667492_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-67	74.8
WP_080083488.1\|2667484_2667991_-	prepilin peptidase	A0A0U2RT81	Escherichia_phage	9.2e-61	68.9
WP_000280163.1\|2668612_2668798_+	DUF1187 family protein	NA	NA	NA	NA
WP_001518052.1\|2669088_2669313_+	hypothetical protein	NA	NA	NA	NA
WP_001575998.1\|2669385_2669664_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.4e-10	37.5
WP_022742740.1\|2669638_2670718_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.3e-101	52.8
WP_000722368.1\|2671100_2671454_-	YebY family protein	NA	NA	NA	NA
2670858:2670880	attR	NA	NA	NA	NA
WP_000979706.1\|2671470_2672346_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000168393.1\|2672346_2672721_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000856224.1\|2672858_2673089_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3

DBSCAN-SWA_5

2974436 : 2981749

Ralstonia_phage(16.67%)

protease,integrase

attL 2969232:2969246|attR 2980485:2980499

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2969232:2969246	attL	NA	NA	NA	NA
WP_023228156.1\|2974436_2974814_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.2e-20	41.0
WP_001117984.1\|2974975_2975173_+	hypothetical protein	NA	NA	NA	NA
WP_000934064.1\|2975385_2977662_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|2977692_2978013_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_080083530.1\|2978336_2978558_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	7.2e-18	64.2
WP_000125894.1\|2978687_2980634_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
2980485:2980499	attR	NA	NA	NA	NA
WP_001201751.1\|2980630_2981749_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045955

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection