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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP035686 Vibrio metoecus strain 2011V-1169 chromosome 1, complete sequence 3 crisprs cas3,DEDDh,DinG,csx1,WYL,csa3,cas6f,cas7f,cas5f,TnsE_C 0 2 3 0
NZ_CP035687 Vibrio metoecus strain 2011V-1169 chromosome 2, complete sequence 0 crisprs csa3,cas3HD,cas3 0 0 0 0

Results visualization

1. NZ_CP035686
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP035686_1 1714992-1715079 TypeI-A I-F
1 spacers
csa3,cas6f,cas7f,cas5f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP035686_2 2262005-2262143 Orphan NA
2 spacers
TnsE_C

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP035686_3 2322522-2322765 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP035686_3 3.1|2322571|37|NZ_CP035686|PILER-CR 2322571-2322607 37 NC_049942 Escherichia phage JLK-2012, complete sequence 23524-23560 4 0.892
NZ_CP035686_3 3.1|2322571|37|NZ_CP035686|PILER-CR 2322571-2322607 37 NC_021742 Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence 35428-35464 4 0.892
NZ_CP035686_1 1.1|1715020|32|NZ_CP035686|CRISPRCasFinder 1715020-1715051 32 NZ_CP028885 Borrelia turcica IST7 plasmid lp129, complete sequence 57072-57103 7 0.781

1. spacer 3.1|2322571|37|NZ_CP035686|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
caggtcgccagttcgattccggtagccggcaccatat	Protospacer
.*********************.***********. *

2. spacer 3.1|2322571|37|NZ_CP035686|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
taggtcaccagttcgattccggtagccggcaccaatc	Protospacer
******.***************.*********** *.

3. spacer 1.1|1715020|32|NZ_CP035686|CRISPRCasFinder matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 7, identity: 0.781

tttttcacagtagaaaaaggaggatta-gtaat	CRISPR spacer
ttagtcaaaatagaaaaaggaggattacatga-	Protospacer
**  *** *.***************** .*.* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 462213 : 468693 7 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_2 2002400 : 2009405 9 Anguillid_herpesvirus(16.67%) NA NA
DBSCAN-SWA_3 2239041 : 2246296 6 uncultured_Mediterranean_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage