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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 1 crisprs NA 0 2 2 0
NZ_CP046005 Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence 1 crisprs NA 0 0 1 0
NZ_CP046006 Escherichia coli strain 1919D3 chromosome, complete genome 6 crisprs csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG 0 21 5 0

Results visualization

1. NZ_CP046006
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046006_1 1000945-1001461 Unclear I-E
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046006_2 1027010-1027831 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046006_3 2154035-2154158 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046006_4 2835073-2835164 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046006_5 3689928-3690024 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046006_6 3932146-3932267 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046006_2 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027649-1027680 32 NZ_CP042584 Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence 72360-72391 0 1.0
NZ_CP046006_4 4.1|2835099|40|NZ_CP046006|CRISPRCasFinder 2835099-2835138 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP046006_3 3.1|2154078|38|NZ_CP046006|CRISPRCasFinder 2154078-2154115 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP046006_2 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027283-1027314 32 MF547662 Clostridioides phage LIBA6276, complete genome 37369-37400 4 0.875
NZ_CP046006_2 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027283-1027314 32 MF547663 Clostridioides phage LIBA2945, complete genome 37369-37400 4 0.875
NZ_CP046006_2 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027283-1027314 32 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 83504-83535 5 0.844
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP030127 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence 318534-318565 6 0.812
NZ_CP046006_1 1.16|1001401|32|NZ_CP046006|CRT 1001401-1001432 32 MN693675 Marine virus AFVG_250M630, complete genome 14302-14333 6 0.812
NZ_CP046006_1 1.16|1001401|32|NZ_CP046006|CRT 1001401-1001432 32 MN693578 Marine virus AFVG_25M520, complete genome 14539-14570 6 0.812
NZ_CP046006_2 2.6|1027344|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027344-1027375 32 NZ_CP025114 Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence 241497-241528 6 0.812
NZ_CP046006_2 2.6|1027344|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027344-1027375 32 NZ_CP044544 Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence 137039-137070 6 0.812
NZ_CP046006_1 1.7|1001339|33|NZ_CP046006|CRISPRCasFinder 1001339-1001371 33 NZ_CP030127 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence 318534-318566 7 0.788
NZ_CP046006_1 1.8|1001400|33|NZ_CP046006|CRISPRCasFinder 1001400-1001432 33 MN693675 Marine virus AFVG_250M630, complete genome 14301-14333 7 0.788
NZ_CP046006_1 1.8|1001400|33|NZ_CP046006|CRISPRCasFinder 1001400-1001432 33 MN693578 Marine virus AFVG_25M520, complete genome 14538-14570 7 0.788
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP034811 Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence 128867-128898 7 0.781
NZ_CP046006_1 1.23|1001341|33|NZ_CP046006|PILER-CR 1001341-1001373 33 NZ_CP030127 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence 318534-318566 7 0.788
NZ_CP046006_1 1.24|1001402|33|NZ_CP046006|PILER-CR 1001402-1001434 33 MN693675 Marine virus AFVG_250M630, complete genome 14301-14333 7 0.788
NZ_CP046006_1 1.24|1001402|33|NZ_CP046006|PILER-CR 1001402-1001434 33 MN693578 Marine virus AFVG_25M520, complete genome 14538-14570 7 0.788
NZ_CP046006_2 2.2|1027100|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027100-1027131 32 MN434094 Klebsiella phage AmPh_EK80, complete genome 63674-63705 7 0.781
NZ_CP046006_2 2.2|1027100|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027100-1027131 32 MN101228 Klebsiella phage KPN4, complete genome 50865-50896 7 0.781
NZ_CP046006_2 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027649-1027680 32 MT446416 UNVERIFIED: Escherichia virus TH47, complete genome 160213-160244 7 0.781
NZ_CP046006_2 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027649-1027680 32 KM507819 Escherichia phage 121Q, complete genome 77721-77752 7 0.781
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 NZ_CP053436 Spirosoma sp. TS118 plasmid pTS, complete sequence 23185-23216 8 0.75
NZ_CP046006_2 2.3|1027161|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027161-1027192 32 NC_018454 Cronobacter phage phiES15, complete genome 8781-8812 8 0.75
NZ_CP046006_2 2.3|1027161|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027161-1027192 32 JQ780327 Cronobacter phage phiES15, complete sequence 8781-8812 8 0.75
NZ_CP046006_2 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027710-1027741 32 NZ_CP013415 Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence 218852-218883 8 0.75
NZ_CP046006_1 1.4|1001156|33|NZ_CP046006|CRISPRCasFinder 1001156-1001188 33 NZ_CP053436 Spirosoma sp. TS118 plasmid pTS, complete sequence 23185-23217 9 0.727
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP024426 Paracoccus yeei strain TT13 plasmid pTT13-4, complete sequence 27168-27199 9 0.719
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP020445 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete sequence 139663-139694 9 0.719
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP031079 Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence 266388-266419 9 0.719
NZ_CP046006_1 1.16|1001401|32|NZ_CP046006|CRT 1001401-1001432 32 NZ_LT960613 Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence 10510-10541 9 0.719
NZ_CP046006_1 1.16|1001401|32|NZ_CP046006|CRT 1001401-1001432 32 NZ_CP018682 Vibrio harveyi isolate QT520 plasmid p1, complete sequence 47003-47034 9 0.719
NZ_CP046006_1 1.20|1001158|33|NZ_CP046006|PILER-CR 1001158-1001190 33 NZ_CP053436 Spirosoma sp. TS118 plasmid pTS, complete sequence 23185-23217 9 0.727
NZ_CP046006_2 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027222-1027253 32 NZ_CP009595 Bacillus cereus strain 3a plasmid pBFC_3, complete sequence 298003-298034 9 0.719
NZ_CP046006_2 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027222-1027253 32 NZ_CP009606 Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence 164238-164269 9 0.719
NZ_CP046006_2 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027222-1027253 32 NZ_CP053994 Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence 238009-238040 9 0.719
NZ_CP046006_2 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027222-1027253 32 NZ_CP053992 Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence 221025-221056 9 0.719
NZ_CP046006_2 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027283-1027314 32 MN693584 Marine virus AFVG_25M163, complete genome 29591-29622 9 0.719
NZ_CP046006_2 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027283-1027314 32 MN103543 Pseudomonas phage vB_PaeM_PS119XW, complete genome 258501-258532 9 0.719
NZ_CP046006_2 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027283-1027314 32 MK599315 Pseudomonas phage PA1C, complete genome 257887-257918 9 0.719
NZ_CP046006_2 2.6|1027344|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027344-1027375 32 NZ_CP054028 Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence 1548232-1548263 9 0.719
NZ_CP046006_2 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027710-1027741 32 NZ_CP014797 Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence 208455-208486 9 0.719
NZ_CP046006_5 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder 3689955-3689997 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4037-4079 9 0.791
NZ_CP046006_5 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder 3689955-3689997 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4036-4078 9 0.791
NZ_CP046006_5 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder 3689955-3689997 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4036-4078 9 0.791
NZ_CP046006_5 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder 3689955-3689997 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4036-4078 9 0.791
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 CAJDKA010000002 Enterococcus phage 163 genome assembly, contig: phage163-genome, whole genome shotgun sequence 135561-135592 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 MT856905 Enterococcus phage vB_EfaM_A2, complete genome 39757-39788 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 MW004544 Enterococcus phage EFGrKN, complete genome 39314-39345 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 MN241318 Enterococcus phage PEf771, complete genome 81969-82000 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 NC_029009 Enterococcus phage EFDG1, complete genome 39358-39389 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 KY549443 Enterococcus phage EFP01, complete genome 116454-116485 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 MH880817 Enterococcus phage EfV12-phi1, complete genome 41045-41076 10 0.688
NZ_CP046006_1 1.12|1001157|32|NZ_CP046006|CRT 1001157-1001188 32 MN027503 Enterococcus phage vB_OCPT_Ben, complete genome 111027-111058 10 0.688
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NC_020894 Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence 48874-48905 10 0.688
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP007257 Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence 14954-14985 10 0.688
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NC_017766 Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence 48875-48906 10 0.688
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 MH045568 Microbacterium phage Kieran, complete genome 35236-35267 10 0.688
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 MK937598 Microbacterium phage Celaena, complete genome 35975-36006 10 0.688
NZ_CP046006_2 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027649-1027680 32 MF403008 Agrobacterium phage Atu_ph07, complete genome 280549-280580 10 0.688
NZ_CP046006_2 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027710-1027741 32 NZ_CP041349 Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence 27173-27204 10 0.688
NZ_CP046006_2 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027710-1027741 32 NZ_CP041350 Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence 149091-149122 10 0.688
NZ_CP046006_2 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027710-1027741 32 NZ_CP004365 Komagataeibacter xylinus E25 plasmid pGX5, complete sequence 172655-172686 10 0.688
NZ_CP046006_1 1.15|1001340|32|NZ_CP046006|CRT 1001340-1001371 32 NZ_CP041045 Paracoccus sp. AK26 plasmid pAK1, complete sequence 285716-285747 11 0.656
NZ_CP046006_2 2.8|1027466|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027466-1027497 32 NC_023136 Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence 124307-124338 11 0.656
NZ_CP046006_2 2.9|1027527|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT 1027527-1027558 32 MN694507 Marine virus AFVG_250M1178, complete genome 3229-3260 11 0.656

1. spacer 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0 

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
actgcaaagttcttcacgctggtttttatgca	Protospacer
********************************

2. spacer 4.1|2835099|40|NZ_CP046006|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

3. spacer 3.1|2154078|38|NZ_CP046006|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947 

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

4. spacer 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875 

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** *

5. spacer 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875 

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** *

6. spacer 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844 

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cctataaaa	Protospacer
*** ******************* ..**** *

7. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812 

tgatccgcgaccgccagatggcgcagc-ctgtc	CRISPR spacer
agctccgcgaccgcctgatcgcgcagcgccgt-	Protospacer
 * ************ *** ******* *.**

8. spacer 1.16|1001401|32|NZ_CP046006|CRT matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 6, identity: 0.812 

-gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
agtgt-ccagttataaaaaacccaccatcatta	Protospacer
 ***. ****.**********.******** .*

9. spacer 1.16|1001401|32|NZ_CP046006|CRT matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 6, identity: 0.812 

-gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
agtgt-ccagttataaaaaacccaccatcatta	Protospacer
 ***. ****.**********.******** .*

10. spacer 2.6|1027344|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812 

atcggacg-atggcgatcgcaatcgcgcgggaa	CRISPR spacer
-ttagacgcatggcgattgcaatcgcgtgggat	Protospacer
 *..**** ********.*********.****

11. spacer 2.6|1027344|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 6, identity: 0.812 

atcggacg-atggcgatcgcaatcgcgcgggaa	CRISPR spacer
-ttagacgcatggcgattgcaatcgcgtgggat	Protospacer
 *..**** ********.*********.****

12. spacer 1.7|1001339|33|NZ_CP046006|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788 

ttgatccgcgaccgccagatggcgcagc-ctgtc	CRISPR spacer
cagctccgcgaccgcctgatcgcgcagcgccgt-	Protospacer
. * ************ *** ******* *.**

13. spacer 1.8|1001400|33|NZ_CP046006|CRISPRCasFinder matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 7, identity: 0.788 

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

14. spacer 1.8|1001400|33|NZ_CP046006|CRISPRCasFinder matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 7, identity: 0.788 

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

15. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
tcatgcagcaccgccagatgccgcaggctgtc	Protospacer
* ** *.  *********** ***** *****

16. spacer 1.23|1001341|33|NZ_CP046006|PILER-CR matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788 

ttgatccgcgaccgccagatggcgcagc-ctgtc	CRISPR spacer
cagctccgcgaccgcctgatcgcgcagcgccgt-	Protospacer
. * ************ *** ******* *.**

17. spacer 1.24|1001402|33|NZ_CP046006|PILER-CR matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 7, identity: 0.788 

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

18. spacer 1.24|1001402|33|NZ_CP046006|PILER-CR matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 7, identity: 0.788 

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

19. spacer 2.2|1027100|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MN434094 (Klebsiella phage AmPh_EK80, complete genome) position: , mismatch: 7, identity: 0.781 

--ccgtcggcagcggcgttaaatggggcgcgctt	CRISPR spacer
tccagtc--cagcgtcgttaaatgcggcgcgcag	Protospacer
  * ***  ***** ********* *******

20. spacer 2.2|1027100|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MN101228 (Klebsiella phage KPN4, complete genome) position: , mismatch: 7, identity: 0.781 

--ccgtcggcagcggcgttaaatggggcgcgctt	CRISPR spacer
tccagtc--cagcgtcgttaaatgcggcgcgcag	Protospacer
  * ***  ***** ********* *******

21. spacer 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 7, identity: 0.781 

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

22. spacer 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 7, identity: 0.781 

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

23. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to NZ_CP053436 (Spirosoma sp. TS118 plasmid pTS, complete sequence) position: , mismatch: 8, identity: 0.75 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
tctttgcggaaacgcaaaatagtttatgtatg	Protospacer
 *.* .  ***************** * ****

24. spacer 2.3|1027161|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75 

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

25. spacer 2.3|1027161|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75 

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

26. spacer 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75 

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

27. spacer 1.4|1001156|33|NZ_CP046006|CRISPRCasFinder matches to NZ_CP053436 (Spirosoma sp. TS118 plasmid pTS, complete sequence) position: , mismatch: 9, identity: 0.727 

gacctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
ttctttgcggaaacgcaaaatagtttatgtatg	Protospacer
  *.* .  ***************** * ****

28. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP024426 (Paracoccus yeei strain TT13 plasmid pTT13-4, complete sequence) position: , mismatch: 9, identity: 0.719 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
tgcgccgcgaccgccaggtcgcgcagcgccga	Protospacer
**  *************.* ******* .

29. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP020445 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
tgcgccgcgaccgccaggtcgcgcagcgccga	Protospacer
**  *************.* ******* .

30. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 9, identity: 0.719 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
tgcgccgcgaccgccaggtcgcgcagcgccga	Protospacer
**  *************.* ******* .

31. spacer 1.16|1001401|32|NZ_CP046006|CRT matches to NZ_LT960613 (Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence) position: , mismatch: 9, identity: 0.719 

gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aggcgccagctacaaaaagctcaccttgagtt	Protospacer
. **********.*****.****** * *..

32. spacer 1.16|1001401|32|NZ_CP046006|CRT matches to NZ_CP018682 (Vibrio harveyi isolate QT520 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719 

gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aggctccagctacaaaaaactcaccttgagtt	Protospacer
. ** *******.************ * *..

33. spacer 1.20|1001158|33|NZ_CP046006|PILER-CR matches to NZ_CP053436 (Spirosoma sp. TS118 plasmid pTS, complete sequence) position: , mismatch: 9, identity: 0.727 

gacctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
ttctttgcggaaacgcaaaatagtttatgtatg	Protospacer
  *.* .  ***************** * ****

34. spacer 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

35. spacer 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

36. spacer 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

37. spacer 2.4|1027222|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

38. spacer 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719 

tacagtttccataaattcacctcgtttatata	CRISPR spacer
ggggatatctataaactcacctcgtttatatt	Protospacer
 . ..* **.*****.***************

39. spacer 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719 

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

40. spacer 2.5|1027283|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719 

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

41. spacer 2.6|1027344|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.719 

atcggacgatggcgatcgcaatcgcgcgggaa	CRISPR spacer
aaaagacgatggcgatcgcaatcgtgcctttc	Protospacer
*  .********************.**

42. spacer 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************

43. spacer 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791 

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

44. spacer 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791 

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

45. spacer 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791 

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

46. spacer 5.1|3689955|43|NZ_CP046006|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791 

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

47. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to CAJDKA010000002 (Enterococcus phage 163 genome assembly, contig: phage163-genome, whole genome shotgun sequence) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

48. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to MT856905 (Enterococcus phage vB_EfaM_A2, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

49. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to MW004544 (Enterococcus phage EFGrKN, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

50. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to MN241318 (Enterococcus phage PEf771, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

51. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to NC_029009 (Enterococcus phage EFDG1, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

52. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to KY549443 (Enterococcus phage EFP01, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

53. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to MH880817 (Enterococcus phage EfV12-phi1, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

54. spacer 1.12|1001157|32|NZ_CP046006|CRT matches to MN027503 (Enterococcus phage vB_OCPT_Ben, complete genome) position: , mismatch: 10, identity: 0.688 

acctgaacgaaacgcaaaatagtttctttatg	CRISPR spacer
taaagaacgaaactcaatatagtttctagcta	Protospacer
    ********* *** *********   *.

55. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NC_020894 (Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence) position: , mismatch: 10, identity: 0.688 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
ttgcccgccaccgccagatgacgcagcgcaag	Protospacer
* ..**** ***********.****** ..

56. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 10, identity: 0.688 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
tgatccgcgacggccggatggcgggaaacaac	Protospacer
*********** ***.******* ..  .. *

57. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NC_017766 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence) position: , mismatch: 10, identity: 0.688 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
ttgcccgccaccgccagatgacgcagcgcaag	Protospacer
* ..**** ***********.****** ..

58. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to MH045568 (Microbacterium phage Kieran, complete genome) position: , mismatch: 10, identity: 0.688 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
ctctccgcgacctccagacggcgcaggactgc	Protospacer
.  ********* *****.*******  .  *

59. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to MK937598 (Microbacterium phage Celaena, complete genome) position: , mismatch: 10, identity: 0.688 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
ccctccgcgacctccagacggcgcaggactgc	Protospacer
.  ********* *****.*******  .  *

60. spacer 2.11|1027649|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 10, identity: 0.688 

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
cataagaagtgcttcacgctggttttcatcag	Protospacer
  *. .**** ***************.**  .

61. spacer 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688 

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*

62. spacer 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688 

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

63. spacer 2.12|1027710|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688 

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

64. spacer 1.15|1001340|32|NZ_CP046006|CRT matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 11, identity: 0.656 

tgatccgcgaccgccagatggcgcagcctgtc	CRISPR spacer
ccgcccgcgaccgccagatgccccagcgacca	Protospacer
. ..**************** * ****   .

65. spacer 2.8|1027466|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to NC_023136 (Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656 

cgtccgcggctgcaactgatgccggggcttat	CRISPR spacer
tcaagacggctgcaaacgatgccggggctagg	Protospacer
.    .********* .************ .

66. spacer 2.9|1027527|32|NZ_CP046006|PILER-CR,CRISPRCasFinder,CRT matches to MN694507 (Marine virus AFVG_250M1178, complete genome) position: , mismatch: 11, identity: 0.656 

aaccttgtcgggtcgcccgtgcgtcatgatga	CRISPR spacer
tggtatgtcgggtagcccgtgcgccatgcccg	Protospacer
 . . ******** *********.**** . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1035256 : 1048439 12 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_2 1652572 : 1662014 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_3 2407198 : 2513721 96 Escherichia_phage(46.15%) tRNA,transposase,integrase,lysis,terminase,tail attL 2462331:2462373|attR 2508343:2508385
DBSCAN-SWA_4 3053632 : 3083750 38 Cronobacter_phage(78.79%) holin,capsid,portal,integrase,head,terminase,tail attL 3047650:3047678|attR 3088471:3088499
DBSCAN-SWA_5 3690027 : 3717347 24 Clostridioides_phage(25.0%) plate,transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP046005
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046005_1 11553-11660 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 95478 91 Escherichia_phage(65.06%) integrase,holin,tail,head attL 11822:11838|attR 59466:59482

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP046004
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046004_1 156242-156399 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 81476-81526 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 182983-183033 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 180762-180812 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029729 Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence 96276-96326 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 235796-235846 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 42635-42685 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 152742-152792 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 142863-142913 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 133710-133760 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 KP899806 Salmonella enterica strain B71 plasmid pB71, complete sequence 117174-117224 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 192529-192579 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 11544-11594 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MN232190 Escherichia coli plasmid pGD27-31, complete sequence 77135-77185 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 247816-247866 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 175824-175874 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 29608-29658 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP030182 Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence 195030-195080 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 160405-160455 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP023167 Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence 229056-229106 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 1240-1290 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 150895-150945 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 222888-222938 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 157698-157748 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MN256758 Escherichia coli strain 4M8F plasmid p4M8F, complete sequence 163625-163675 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MN256759 Escherichia coli strain 4M9F plasmid p4M9F, complete sequence 139403-139453 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 103197-103247 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_002305 Salmonella typhi plasmid R27, complete sequence 54047-54097 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 156262-156312 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 114948-114998 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 99282-99332 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 190141-190191 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 186842-186892 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 163174-163224 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 95412-95462 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 154888-154938 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 135342-135392 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 101555-101605 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 111577-111627 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MN256757 Escherichia coli strain 4M18F plasmid p4M18F, complete sequence 163625-163675 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 192086-192136 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 157699-157749 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 237889-237939 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 79517-79567 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 27631-27681 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 106159-106209 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 267735-267785 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 173816-173866 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 95376-95426 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 230101-230151 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_MG904992 Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence 20571-20621 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 1141-1191 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 259337-259387 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 210872-210922 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 110178-110228 0 1.0
NZ_CP046004_1 1.1|156262|51|NZ_CP046004|PILER-CR 156262-156312 51 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 111658-111708 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 42568-42614 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 152675-152721 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 142796-142842 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 133643-133689 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 KP899806 Salmonella enterica strain B71 plasmid pB71, complete sequence 117107-117153 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 192462-192508 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 11477-11523 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 150828-150874 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MN256758 Escherichia coli strain 4M8F plasmid p4M8F, complete sequence 163558-163604 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MN256759 Escherichia coli strain 4M9F plasmid p4M9F, complete sequence 139336-139382 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 103130-103176 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_002305 Salmonella typhi plasmid R27, complete sequence 53980-54026 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 190074-190120 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 154821-154867 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 135275-135321 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 101488-101534 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MN256757 Escherichia coli strain 4M18F plasmid p4M18F, complete sequence 163558-163604 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 79450-79496 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 230034-230080 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 110111-110157 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 81547-81593 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 183054-183100 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 180833-180879 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029729 Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence 96347-96393 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 235867-235913 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MN232190 Escherichia coli plasmid pGD27-31, complete sequence 77206-77252 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 247887-247933 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 175895-175941 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 29679-29725 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP030182 Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence 195101-195147 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 160476-160522 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP023167 Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence 229127-229173 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 1311-1357 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 222959-223005 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 157769-157815 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 156333-156379 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 115019-115065 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 99353-99399 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 186913-186959 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 163245-163291 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 95483-95529 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 111648-111694 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 192157-192203 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 157770-157816 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 237960-238006 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 27702-27748 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 106230-106276 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 267806-267852 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 173887-173933 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 95447-95493 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_MG904992 Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence 20642-20688 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 1212-1258 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 259408-259454 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 210943-210989 0 1.0
NZ_CP046004_1 1.2|156333|47|NZ_CP046004|PILER-CR 156333-156379 47 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 111729-111775 0 1.0

1. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

2. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

3. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

4. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

5. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

6. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

7. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

8. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

9. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

10. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

11. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

12. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

13. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

14. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

15. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

16. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

17. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

18. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

19. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

20. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

21. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

22. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

23. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

24. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

25. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

26. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

27. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

28. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

29. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

30. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

31. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

32. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

33. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

34. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

35. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

36. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

37. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

38. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

39. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

40. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

41. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

42. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

43. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

44. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

45. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

46. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

47. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

48. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

49. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

50. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

51. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

52. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

53. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

54. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

55. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

56. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

57. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

58. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

59. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

60. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

61. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

62. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

63. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

64. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

65. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

66. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

67. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

68. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

69. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

70. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

71. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

72. spacer 1.1|156262|51|NZ_CP046004|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0 

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

73. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

74. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

75. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

76. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

77. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

78. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

79. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

80. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

81. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

82. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

83. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

84. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

85. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

86. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

87. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

88. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

89. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

90. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

91. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

92. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

93. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

94. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

95. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

96. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

97. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

98. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

99. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

100. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

101. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

102. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

103. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

104. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

105. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

106. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

107. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

108. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

109. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

110. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

111. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

112. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

113. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

114. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

115. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

116. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

117. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

118. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

119. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

120. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

121. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

122. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

123. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

124. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

125. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

126. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

127. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

128. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

129. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

130. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

131. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

132. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

133. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

134. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

135. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

136. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

137. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

138. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

139. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

140. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

141. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

142. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

143. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

144. spacer 1.2|156333|47|NZ_CP046004|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0 

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 12592 : 55609 37 Salmonella_phage(30.77%) transposase,integrase attL 34199:34258|attR 57509:57690
DBSCAN-SWA_2 65192 : 73451 10 Escherichia_phage(42.86%) transposase,integrase attL 70452:70466|attR 75292:75306

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage