CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045696	Muribaculaceae bacterium DSM 108610 strain Oil-RF-744-WCA-WT-10 chromosome, complete genome	9 crisprs	RT,PrimPol,cas2,cas1,cas4,cas12a,WYL,PD-DExK,DEDDh	1	9	2	4

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045696_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_1

360071-360176

Orphan

Consensus_repeat	Method
TAGAGAACAGGCTGGTGAACAGGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045696_1

>merge|NZ_CP045696|1|360071-360176|CRISPRCasFinder
AAGTGACCGAGCTAGTGACCAAGTTGGTGACCAAGTTAATAGCACTGATATTCAGCGGAATGACAGGACAATCAAAGCTGAAACGGAACAAGCTAGGGAACAGGTT

>NZ_CP045696|1|1|360071-360176|CRISPRCasFinder
AAGTGACCGAGCTAGTGACCAAGTT	GGTGACCAAGTTAATAGCACTGATATTCAGCGGAATGACAGGACAATCAAAGCTGA
AACGGAACAAGCTAGGGAACAGGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154326687.1\|368424_369420_-\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|375587
NZ_CP045696.1\|WP_154326669.1\|350011_351058_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378673
NZ_CP045696.1\|WP_154326677.1\|358208_358934_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227645
NZ_CP045696.1\|WP_154326668.1\|348339_350010_+\|M6-family-metalloprotease-domain-containing-protein	unknown	unknown	gnl\|CDD\|274507
NZ_CP045696.1\|WP_154326671.1\|351591_352968_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226718
NZ_CP045696.1\|WP_154326673.1\|354369_354861_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP045696.1\|WP_154326682.1\|363870_364710_+\|RloB-domain-containing-protein	unknown	unknown	gnl\|CDD\|379341
NZ_CP045696.1\|WP_154326681.1\|362558_363893_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP045696.1\|WP_154326686.1\|367556_368435_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375596
NZ_CP045696.1\|WP_154326679.1\|360579_360936_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP045696.1\|WP_154326685.1\|366473_366842_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154326676.1\|357241_358099_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP045696.1\|WP_154326670.1\|351210_351516_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_CP045696.1\|WP_154326674.1\|355083_355944_-\|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP045696.1\|WP_154326675.1\|356727_357192_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154326678.1\|360326_360572_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154326680.1\|360948_362304_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374230
NZ_CP045696.1\|WP_154326683.1\|364711_366079_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154326672.1\|352915_354364_-\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|183088
NZ_CP045696.1\|WP_154326684.1\|366091_366472_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154326687.1\|368424_369420_-\|nucleotidyltransferase	gnl\|CDD\|375587	pfam18144, SMODS, Second Messenger Oligonucleotide or Dinucleotide Synthetase domain. Nucleotide synthetase enzyme of the DNA polymerase beta superfamily. Experimental studies have demonstrated cGAMP synthetase activity in the Vibrio cholerae DncV protein, a member of the SMODS family. The diversity inherent to the SMODS family suggests members of the family could generate a range of nucleotides, cyclic and/or linear. The nucleotide second messengers generated by the SMODS domains are predicted to activate effectors in a class of conflict systems reliant on the production and sensing of the nucleotide second messengers.	1.18619e-10
NZ_CP045696.1\|WP_154326669.1\|350011_351058_+\|hypothetical-protein	gnl\|CDD\|378673	pfam11551, Omp28, Outer membrane protein Omp28. Omp28 is a 28-kDa outer membrane protein from Porphyromonas gingivalis. Omp28 is thought to be a surface adhesion/receptor protein. Omp28 is expressed in a wide distribution of P.gingivalis strains.	1.16983e-09
NZ_CP045696.1\|WP_154326680.1\|360948_362304_+\|hypothetical-protein	gnl\|CDD\|374230	pfam15927, Casc1_N, Cancer susceptibility candidate 1 N-terminus. This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 200 amino acids in length. The family is found in association with pfam12366. There are two completely conserved residues (N and W) that may be functionally important.	1.08711e-05
NZ_CP045696.1\|WP_154326668.1\|348339_350010_+\|M6-family-metalloprotease-domain-containing-protein	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	2.34752e-39
NZ_CP045696.1\|WP_154326679.1\|360579_360936_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	3.88872e-08
NZ_CP045696.1\|WP_154326673.1\|354369_354861_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	8.6488e-16
NZ_CP045696.1\|WP_154326682.1\|363870_364710_+\|RloB-domain-containing-protein	gnl\|CDD\|379341	pfam13707, RloB, RloB-like protein. This family includes the RloB protein that is found within a bacterial restriction modification operon. This family includes the AbiLii protein that is found as part of a plasmid encoded phage abortive infection mechanism. Deletion within abiLii abolished the phage resistance. The family includes some proteins annotated as CRISPR Csm2 proteins.	0.000249956
NZ_CP045696.1\|WP_154326681.1\|362558_363893_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.91359e-18
NZ_CP045696.1\|WP_154326686.1\|367556_368435_-\|hypothetical-protein	gnl\|CDD\|375596	pfam18159, S_4TM, SMODS-associating 4TM effector domain. Predicted pore-forming effector domain found in conserved genome contexts with diverse nucleotide synthetases including the SMODS synthetases. Predicted to function as a pore-forming effector in a class of conflict systems reliant on the production of second messenger nucleotide or nucleotide derivatives. S-4TM domains are predicted to initiate cell suicide responses upon their activation.	2.23995e-62
NZ_CP045696.1\|WP_154326671.1\|351591_352968_-\|hypothetical-protein	gnl\|CDD\|226718	COG4268, McrC, McrBC 5-methylcytosine restriction system component [Defense mechanisms].	3.2096e-07
NZ_CP045696.1\|WP_154326677.1\|358208_358934_+\|hypothetical-protein	gnl\|CDD\|227645	COG5340, COG5340, Predicted transcriptional regulator [Transcription].	0.00163328
NZ_CP045696.1\|WP_154326670.1\|351210_351516_-\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	7.41158e-19
NZ_CP045696.1\|WP_154326672.1\|352915_354364_-\|AAA-domain-containing-protein	gnl\|CDD\|183088	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.	6.07464e-32
NZ_CP045696.1\|WP_154326676.1\|357241_358099_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	9.76975e-26
NZ_CP045696.1\|WP_154326674.1\|355083_355944_-\|hypothetical-protein	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.77775e-114

>NZ_CP045696.1|WP_154326677.1|358208_358934_+|hypothetical-protein
MTTAKKIEQIVSEFPEDFVFTYRDLGLTAEDSANVIKKLNRLAESGAISKLSKGRFFKPKKSMFGALNPPVEEVVKDLLVKNGKIIGYLTNYSVYNQLGLTSQIPNTIVIGSNTKRSKTRRGNTEIRFVLQRNEITKASIYQLQLLDVIKSIKSIPDTDIDKSCARMLVLLSELNERQINALMRMAQLYPPRVIALLGALLQQMGCKLDLSALRGRLNPISSYNYGISQTVLSFSQQWKIK
>NZ_CP045696.1|WP_154326676.1|357241_358099_+|tyrosine-type-recombinase/integrase
MDDFRSFLISEHEYWSRDEKTNRLKCSNRRYNKAYTQVNDECLKLGLKLEKRCPEPRSKNTLNNILVRLKTFWIWCIKHGYTERNPFNKFTIESAEYGTPYYITIDERHQLEEAELDGMVAVQRDIFVFQCCVGCRVGDLYKLTYANIVDGILTYTPRKTKDNNPVLAEVPLNATAKALLEKYYDPNRDALFPFISQQRYNDNIKKTFKQAGLNHRVAVLNPLTRQHEIKPLYEVASSHMARRAFVGGPYHKVQDPSAIGSMTGHAEGSKAFARYRKVEMELKSR
>NZ_CP045696.1|WP_154326675.1|356727_357192_+|hypothetical-protein
MAVIYLRLSKRHNELGRNEIILTFRQGSTIYQRSGTEIFILNKPIYWDGEKMVLRARMMTDEVRYHREMKVKLENLCSAITKEWEQTDRKNISPTWLKDVIDRFNHPEKFEADAEQVIRKTNVTSIFIEYMKKHKVSENREKHMLVVVESVPPF
>NZ_CP045696.1|WP_154326674.1|355083_355944_-|hypothetical-protein
MKGEKPKTTESCPRKNSSESERYEGAPTLIGIVGDELVEVQLSSDRMLEYILTPDNLNRAYKQVKANKGSGGIDRMEVEQLLPYLREHKEEITESLLGGSYRPNPVRRVEIPKEGGKRRQLGIPTVVDRVIQQSISQVLSLVYGPKFSETSYGFRPRRSAHQALRKAQEIINSGYKYCVDLDLEKFFDTVSHSKLIQLLGETIKDGRVISLIHKYLNAGVMVGHKYEDTTEGVPQGGPLSPILSNIMLTELDRELERRGLSHAYGILREKAPALRTAVCRTARTVV
>NZ_CP045696.1|WP_154326673.1|354369_354861_-|helix-turn-helix-domain-containing-protein
MTIQEKLGNALRRLRNRQGLSQEAVALAAHIDRRYMSDVENGKRNVSLDILERLAHFFQIPVRDLMAEAERCTLLDNELLKSWLSDNDHGDAVVLEGDEFATAVVGVSNDGRVVYDYDQMMNCLVDTQHMSEDEALEWLENNTLRAIDYMGPKAPIVVHNLKF
>NZ_CP045696.1|WP_154326672.1|352915_354364_-|AAA-domain-containing-protein
MDAKQLYDIVLSMARDFGMTQKNDGHDIIDEKGNTVVRKNLGKDAFSSGGAFFGLLRSDQDFSGPYSDFSFAVCPGSETSMHVCLVSLCIGSNGFQSDYDCASQPGVRRMFLKLQTQDGLTFFKTDFLDKESTSSDLLKMVRSDYPDLSTVTETYKTVFPAARIVDFDSLGDDGAVAVIKQWLAMYAKMRDWGTKVQKKLVDDVVNLIPPLAGNDEETEVRHLLDTRCYVVLQGAPGTGKTYTALKIAKCYDKCFFTQFHAETTYSDFVYGIEPNIDAGCNGPQFRPKPGVLYKAIKYARDNSSERVLLIIDEINRANLSNVLGPVFYLFEYQAGNRNERVKISVGDMPLSSMPANLHVIATMNTADRSLAVVDFALRRRFAWFTLHPHVIKTESGKKFMEKTFNAIDAIFKMYASDGELSLQPGQSYFVVDKVNAENNMRERLVYELMPLVKEYLEAGYLLKAKDAFSEFFRRETGRLLYE
>NZ_CP045696.1|WP_154326671.1|351591_352968_-|hypothetical-protein
MPLVSFSVVKQAGSCMSRSGIIAFGRLSTRSAVVWDTGRFRQWKWRDRSMESVMQRFVALNRTNFQFLGINAVVETRNCKPVVSLTTSNYAGAIPLFSPMSGKPAGDLVVGGSYGEKIDDLIPLLGDSLDKQCNDAMRLVNDTPVNAPIYVECCKYVDLYLEARRQHWHKFANVVKTQHHPSSATLWTEYALRTASDPLQKLVYKNKCNVLTTDHIEWRKLNYVLALALHELQSTQVPLSTRMIYAGRIHSLLITLRNSELVKTSILPVEARDPLPIKKLKQLGNYILNNKTQEKMAWRMDYAQFFERYVQYVLRDVVTRKGGVAVSNPHYDVSMRQRPQWGLACLEPDVVLQKGDVQWVIDAKYKSHLYNWYDSGEALKDAFRHDLHQVLAYCSFNPMIEKRAALIYPYSTFTVHCMKLYSSVTRASASVYLVGIPIDRSMIARIESHLAQLIDFSR
>NZ_CP045696.1|WP_154326670.1|351210_351516_-|N-acetyltransferase
MDTEITIEDNRGVVWARDGGEEAGRLDFTLQGQVMRIEHTLALKRGMGVGATLVEAAVQHAASHGLKVWPVCSYAYAWCERHPQWAHVLDEHMGEGVSCQL
>NZ_CP045696.1|WP_154326669.1|350011_351058_+|hypothetical-protein
MNKLIILLLSALFTLPLIAQNSGSFKRRVLIEEGTGTRCPNCPRGFVGIKELKEAYGDRAVFIAVHQYDNRDPMYLRHSNYPDCNFAGFPDCIFNRDGYHYDPLYGWEIGNGKIVDAASSYFQSTTSDVDIQADASWNADSTAVVGNATIESKTKGETYEVQMVLVADSLTGSETDWYQSNIYYNRDAQNYPAGMADFCEGGKYGQGGFKWVYDDVAIASSYSMGRTQIPRIENLASNTKATVNYTLALPVVGAKYSTAAQDLLPAAIRKDKVSMVAIVTDSRGKVLNCVKVAISGANTNDVTTVKTNRMVDDNVYSLDGRKFPASSLENSSLPRGIYIVNGKKTVKP
>NZ_CP045696.1|WP_154326668.1|348339_350010_+|M6-family-metalloprotease-domain-containing-protein
MKPLGLTMCTMLLALSWASTALAIPAQRLWRTHKQSDGKEITYMLCGDEHCHYYMSADSFVLKRNPTNGDFEYLQRNQQRVRPAEMRNAKPIQQSIQNRTRKTAYTGKKKGLFILVEFDDIKFSRADIKAVYDSICNMKGYHTRPFVGSVHDYFLEQSDGKFDLTFDVVGPVTMSKSESYYGSNSSWGIDVNISEMVLETLNLVKDSVDFSQYDWNGDSIVDQVFLLYAGYGEAQYGPEWTIWPCEGKLSNFAGMTSLPQYNGMTINTFACSCELHSNKGSQLDGIGTICHEFSHCMGFPDFYNTSDMTDFCMDAFELMDQGAYNGSSYCPAAYTGYERWMCGWREPVELKDTCTIAGWQPLVSGGETYILYNEANRNEYYFIDNRERVGFDNGLYSTGLVAVHVDYDADAWSNNTVNADKKHKRMTLLPADGLYDWKTADTDAWPYTYMNGQRTLDSLTDNSRPYPTLFNKNYDGSHLLHKPIYKIRKNEDMTMDFVFGHNPVSAGIRETPSAAAERRDDYIYDLEGRRILLDKDQLRRGIYIVNGKKIIINGHE
>NZ_CP045696.1|WP_154326678.1|360326_360572_+|hypothetical-protein
MIQKRLNIASRSFIQMKMLKPAIAQGYVLRAFPDKPSHSKQRYYLSEKGAKLVKIIISTDKLLGCPKCKFCPWAAHEEQKL
>NZ_CP045696.1|WP_154326679.1|360579_360936_+|helix-turn-helix-domain-containing-protein
MEKKKEESNEKEELTLQNVPKAVNYLINEIAEMRAVLEHIESQLGLGVDKHRPIDEERAAEILGQTKNVIKKMVRAREIPHYDKGRKIYFFEDELIKWVEQSRVKTFEEEYKRHRKLY
>NZ_CP045696.1|WP_154326680.1|360948_362304_+|hypothetical-protein
MEFTRQEIFDLIWKESVTKVSEKLGIPTQILRKYCQRLNIPTPTSAYWSKLKFGKPVEVPALPEFDEEYISLDSFHNSILAKNQKSVKPNRESRKKDTSEKEKSSNEFKTTEIIPTKTKYEIQEITDPRQKIKFELNNLDPTLFVVPEVLYAKDPLIIDTKEFFRGDKNSKYLDKNPYKSKIKAPLNISVHQDNLDRALRIYTTIIRLLKLRGHQIVAKDRFHTYAIVNEEEIPIHLSEKNKQIANTESDYPKYVLVPSGKLKFEIPSSIYYRSSPICVEDTSNTKIEDKILNIILKIEYDAISIKEFRAEQERRRQREEEERKKREEEEKKKRELEKRRKEEMKELRAAIVSAKCYSLANILRDYREKYESFLAEKEFMNDEDKKKLHWLLKKIDWLDPFIECDDKLLTEEDKQSLIHPETDKKDNRMTYHLFYEMPQEFTFWNNPFRRK
>NZ_CP045696.1|WP_154326681.1|362558_363893_+|AAA-family-ATPase
MMLRLILKNFLSFDEEVQFDMFPNMKRTSLSSHISMLAGKLPVLKMAAIYGANGAGKSNLVKALEFIRAFALNKNFIKSIELKNFFYLLKEDAMKAPICLAIEFENQNRFFFYEIEISQRDIEKEGLYETFPLDNKVEPIFERKRLKVTFADSTTVDDAIVEATKKMLAKNPMASLLALNGEFPIVQDPRCKFAAKWFKGQLEIIGVHSFLPTLIDLLRDNKPMMEFARKLIYDLEVGVNDMNMAESDFDQWAKNHINLANTLPGDIDKVKSMSLNANNTPVLSISMEDGVRKVYQLMFDNIGKDGYVGHLDTSSQSDGTLRALTLLPALYYAKMGKTVVVDEINCCLSPTMVKGIVEFFSKTIDTVGQLIFTTHEEQLLDERDILRSDEIWFVDKKEGASIIYSHNDFKEHHTISPMRGYKEGRYGAIRYINLLQKNGQETDI
>NZ_CP045696.1|WP_154326682.1|363870_364710_+|RloB-domain-containing-protein
MDRKLTYKKQPGARALEVEHSYSIVPPQVVISSHDSSVQIPSIYKKEDGVLSYSLICVISGGTDRERTFLNELERKHTFKGVEVIFVSSKKGLGGLTPKMMQSAYEEICKDGIIKMSGRTIKLDAVDTVYMFTDVDHYKDELKGILVSRKSAAPIWIISNPDFEIWLYYCYRNNPYEELKAVIEEKESLRSSKLKTLNGTFNNGGGLDTRKAFERLEDGIVHSKEHYQEMDGIPNLLSTQMHVFAEDVLIRLGNEFKEFVQKKLKFRLRMIMANTAKEK
>NZ_CP045696.1|WP_154326683.1|364711_366079_+|hypothetical-protein
MIVRPRLSDYYNIPLLQSEVDFAIPFMDEDIPLYVDPFLMWKSPSQMDNMLHAGIMQSFNQLGSMYVGNKRDEAIESIIYLSECAEVGLGTSKTRKGRPMSKEQAKAILDLYKDVPQINQYGLKHLEQVQLLVDNISKDRICDMSCSLIKSFLIDYTIDQCKRLGIPIRLSKISLYDYKTCKIINEKITLPINEDNKQPIILVPKRWLRYSPWLNYDDYFKHYLIKNIEEEYDGINNRIEVLKYNRKNFNMVEQYIALKERECGRCENDPLFSKIPIHSANRKVLDIKALPTGKINNADKKYEELMGKVLSSFLFPHLDFAKEQSRIDSGTQIRDLIFYNNTSTDFLAEIYQTYDCKQIVFELKNVKDIEREHINQLNRYMSDSFGRFGIIFTRNKPSKQMFQNTVDLWSGQRRCILIMDDSDLELMCSCNNNQQRQPIEVIKKKYIEFTRMCPN
>NZ_CP045696.1|WP_154326684.1|366091_366472_+|hypothetical-protein
MTREEIANFDKVATQLDSFYAETSILVKKEPKAEMNTFKLKLINKVLVKANDILGDMKPFDDFSEFDLNEMPNNGDVVMILGQYINCLEELRKDNVHMNSGWWYWNIDGDVKSHEIRTYIPTKYKK
>NZ_CP045696.1|WP_154326685.1|366473_366842_+|hypothetical-protein
MAKNQKNKRTTDQQIELYSTIYPLLKSMFIEIKDFSKKNQNDPINLSKVKIINRLLIKAKDILKDESSIEYLDILEEDNLPSMSDAVLIVSQYISALDKFHSDHYRYEDSFGLTWDNPGHWQ
>NZ_CP045696.1|WP_154326686.1|367556_368435_-|hypothetical-protein
MANNIVELENRQEHINQLKAARHLYTKAGNYTTAYVVICALIPIVISIGRIFIDSLAPLVLHTLTAYTLVSLVMGFLLESRISKFRNTAAKIQQLFDSDVLGLKWNAYLWGKKPSLEDVNENIGDLPDKDFIDWYDTQVGVMTKMEATLICQRTNLVYDSKLRKDFNSIINLIAWSALILILIVGFYKNEGMQTAIVFIGVPLVPIIKWIVSTRKQNLDDIEACKSLTSFIDCCLEKLRKNQRSINESALYRIQDGIYHHRKTAFKIPDCLYNYMRSGQENRVHMMVNQLSQ
>NZ_CP045696.1|WP_154326687.1|368424_369420_-|nucleotidyltransferase
MSDSVKSCFDVFMRDSVNLDPERTTTARASRDWLVHKIENLADNGEIPPLYNGTNHLFFGSFARNTKIRPLDDIDIMIVFDAQGCTTDDVTKITRKTYPIYVNNPHAKLLPDYCDGNVLNSRKMIETIKRELGAIPSYSKADIHRNQEAVTLQLSSYEWNYDIVPCFYTTTGFFIIPDGKGSWKGTDPRIDLNRVTQANQRVNGALLPAIRLMKYWKKEHWRDEVSSYLFENLMIDWANSLYSFPMTYPQLVKSALDGLSSLIMRDYYDPKGFQGSINDLDLYDRRRLAIMASQDASEASTAIQYEQNYMTEAAINKWFKMFGNEFPRHGK

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Crispr_ID: NZ_CP045696_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_2

522132-522259

Orphan

Consensus_repeat	Method
AACTTGTTTTTGATTTTTGCATTCCCGAGACGCAGCGTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045696_2

>merge|NZ_CP045696|2|522132-522259|CRISPRCasFinder
AACTTGTTTTTGATTTTTGCATTCCCGAGACGCAGCGTAACTTATCCAAAGTTACTGCAAGTCGAGCGAAATGCAAAATCGGGGGGGAACTTGTTTTTGATTTTTGCATTCCCGAGACGCAGCGTAAC

>NZ_CP045696|2|2|522132-522259|CRISPRCasFinder
AACTTGTTTTTGATTTTTGCATTCCCGAGACGCAGCGTAAC	TTATCCAAAGTTACTGCAAGTCGAGCGAAATGCAAAATCGGGGGGG
AACTTGTTTTTGATTTTTGCATTCCCGAGACGCAGCGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154326823.1\|522288_522966_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377289
NZ_CP045696.1\|WP_154326820.1\|519590_519839_-\|TIGR03905-family-TSCPD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378896
NZ_CP045696.1\|WP_154326824.1\|523049_523535_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867
NZ_CP045696.1\|WP_154326832.1\|531867_532479_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319790
NZ_CP045696.1\|WP_154326815.1\|514471_514858_-\|reactive-intermediate/imine-deaminase	unknown	unknown	gnl\|CDD\|129116
NZ_CP045696.1\|WP_154326830.1\|528022_530410_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP045696.1\|WP_154326822.1\|520706_522068_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_CP045696.1\|WP_154326819.1\|518981_519572_-\|uracil-DNA-glycosylase-family-protein	unknown	unknown	gnl\|CDD\|381682
NZ_CP045696.1\|WP_154326821.1\|519862_520546_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|223736
NZ_CP045696.1\|WP_154326827.1\|524952_526212_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|334596
NZ_CP045696.1\|WP_154326826.1\|523900_524446_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|223463
NZ_CP045696.1\|WP_154326828.1\|526221_527403_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NZ_CP045696.1\|WP_154326829.1\|527556_527916_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328953.1\|511956_514374_+\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
NZ_CP045696.1\|WP_154326818.1\|517507_518152_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_CP045696.1\|WP_154326817.1\|515929_517033_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379235
NZ_CP045696.1\|WP_154328954.1\|518165_518810_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP045696.1\|WP_154326816.1\|514859_515891_-\|YihY-family-inner-membrane-protein	unknown	unknown	gnl\|CDD\|377085
NZ_CP045696.1\|WP_154326831.1\|530620_531550_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376607
NZ_CP045696.1\|WP_154326825.1\|523664_523829_-\|rubredoxin	unknown	unknown	gnl\|CDD\|366011

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154326823.1\|522288_522966_-\|hypothetical-protein	gnl\|CDD\|377289	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in some family members by a pattern match (Prosite:PS00142), of the characteristic HEXXH motif.	3.03749e-101
NZ_CP045696.1\|WP_154326820.1\|519590_519839_-\|TIGR03905-family-TSCPD-domain-containing-protein	gnl\|CDD\|378896	pfam12637, TSCPD, TSCPD domain. This family of proteins is found in bacteria, archaea and viruses. The domain is found in isolation in many proteins where it has a conserved C-terminal motif TSCPD after which the domain is named. Most copies of the domain possess 4 conserved cysteines that may be part of an Iron-sulfur cluster. This domain is found at the C-terminus of some ribonucleoside-diphosphate reductase enzymes.	1.20613e-45
NZ_CP045696.1\|WP_154326824.1\|523049_523535_-\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	1.05427e-58
NZ_CP045696.1\|WP_154326832.1\|531867_532479_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.58525e-38
NZ_CP045696.1\|WP_154326815.1\|514471_514858_-\|reactive-intermediate/imine-deaminase	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	9.42621e-47
NZ_CP045696.1\|WP_154326830.1\|528022_530410_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.34889e-52
NZ_CP045696.1\|WP_154326822.1\|520706_522068_-\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	1.40149e-143
NZ_CP045696.1\|WP_154326819.1\|518981_519572_-\|uracil-DNA-glycosylase-family-protein	gnl\|CDD\|381682	cd10032, UDG-F6_HDG, Uracil DNA glycosylase family 6, includes hypoxanthine-DNA glycosylase and similar proteins. Uracil DNA glycosylase family 6 hypoxanthine-DNA glycosylase (HDG) lacks any detectable UDG activity; it excises hypoxanthine, a deamination product of adenine, from double-stranded DNA. Uracil-DNA glycosylase (UDGs) initiates repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	3.20839e-39
NZ_CP045696.1\|WP_154326821.1\|519862_520546_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.53427e-17
NZ_CP045696.1\|WP_154326827.1\|524952_526212_+\|divalent-metal-cation-transporter	gnl\|CDD\|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	6.05968e-118
NZ_CP045696.1\|WP_154326826.1\|523900_524446_-\|redoxin-domain-containing-protein	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	1.18463e-80
NZ_CP045696.1\|WP_154326828.1\|526221_527403_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	0.000130269
NZ_CP045696.1\|WP_154328953.1\|511956_514374_+\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP045696.1\|WP_154326818.1\|517507_518152_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	1.82312e-104
NZ_CP045696.1\|WP_154326817.1\|515929_517033_-\|AAA-family-ATPase	gnl\|CDD\|379235	pfam13521, AAA_28, AAA domain.	5.76534e-15
NZ_CP045696.1\|WP_154328954.1\|518165_518810_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.38873e-33
NZ_CP045696.1\|WP_154326816.1\|514859_515891_-\|YihY-family-inner-membrane-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	1.91388e-41
NZ_CP045696.1\|WP_154326831.1\|530620_531550_-\|acyltransferase-family-protein	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	2.72911e-08
NZ_CP045696.1\|WP_154326825.1\|523664_523829_-\|rubredoxin	gnl\|CDD\|366011	pfam00301, Rubredoxin, Rubredoxin.	3.40264e-22

>NZ_CP045696.1|WP_154326822.1|520706_522068_-|histidine--tRNA-ligase
MAQKPTIPKGTRDFSPIQMAKRNYIFNTIKDVFLLYGYQQIETPAMENLSTLMGKYGDEGDKLLFKVLNSGDYLKKVPGELLSSRDHVHMIPCISEKGLRYDLTVPFARYVVMHRDELQFPFKRFQIQPVWRADRPQKGRYREFYQCDADVVGSDSLINEIELLAMIDEVFKRFGVNIVIKVNNRKVLSGIADVIGAPDKLVDITVAIDKIDKIGIDNVNEELKEKGLSQEAVDQLEPLLNLKGSNAQKLDTLEQLLAVSETGKKGVEELRFVLGHVEQLGLKATVELDVSLARGLNYYTGTILEVKACDVEMGSITGGGRYDNLTGVFGMPGTSGVGISFGADRIYDVLNTLDLYPSDTISSTKVLFVNFGQKEAAASLHYVMQLRARGISAELFPDNAKMKKQLSYANGKHVPYVAMVGETEMASGTITLKNMETGEQSNLSLDQVVDMVK
>NZ_CP045696.1|WP_154326821.1|519862_520546_-|helix-turn-helix-domain-containing-protein
MDNMFEQLMNLPLFQGVSHEHLENLIEKLPFHFLKFKDGDRIIQAREECTHLRFIVSGTVRAVTASEVSRFSVSQRVDAPNVIGPNYLFGRHTHYPYDVYAVGTTGILQLRKCDYMTILQSDEVFLFNILNYLSHLSQKQTYSLLSQSRGMIAERLARLILYLTGPSSYDIVLHFKQKDLCMLLGARRTSLVNAIDELEARGVISHAAGAINVLDRSALVRFMKHDS
>NZ_CP045696.1|WP_154326820.1|519590_519839_-|TIGR03905-family-TSCPD-domain-containing-protein
MAKYRYYTQGTCSSQIDLDVDDNGVIQDVAFTGGCNGNLQGISRLVKGMSREEAIAKLAGIKCGNKPTSCPDQLAQALKQMP
>NZ_CP045696.1|WP_154326819.1|518981_519572_-|uracil-DNA-glycosylase-family-protein
MSEEIRIESHPFPPFLPPETRVLMLGTFPPKSSRWSMPFFYPNKINDMWRVMGIVFYNNKNQFWDDANKQFRLPAIKRFLEQKHIGMWDTAARVRRLKDNASDKYLEIVETIDLASFLHRQPTIQAIVTTGEKASSVIAGKVGVDVPKIGVPVACDYGGHRFWFYRMPSTSRAYPLPLEKKAQAYGHMFASLGYVL
>NZ_CP045696.1|WP_154328954.1|518165_518810_-|DedA-family-protein
MTYAVIALLMGIESSIVPLPSEVVVPPAAYFSLQAHSQLEIFMVMVTATVGAYVGSIVNYVLSMIIGRPLIYAFADSKVGHMFMLNSDKLRHAEDYFQRKGSVAIFLGRLLPAVRHLISIPAGMSKMNFLKFSVYTILGAGVWNAVLSGFGYMLYLVVPDDAQLFDALEHYNEYLKAAGYGLILLIVVYLVVRHYKKKRSKQLAAREENTESQH
>NZ_CP045696.1|WP_154326818.1|517507_518152_-|ribulose-phosphate-3-epimerase
MKVSPSVLSADFGNLARDIQMINDSKASMLHLDVMDGVFVPNISFGFPVIKHIQALSTKPLDVHLMIVDPDKFVTQVRDCGAALMTVHYEACTHLNRVVQHIHDAGMKAGVALNPATPVALLRDIVACVDLVLLMSVNPGFGGQKFIAGVLDKIAELKQLMAQKHAHALIEVDGGVNAETGKALAQAGADMVVSGNYLFKSPDPQHAIELLNDL
>NZ_CP045696.1|WP_154326817.1|515929_517033_-|AAA-family-ATPase
MTEIKKIVLTGGPCAGKTTALVKIIEHFSSLGFKVFTIPEVPTMFTQAGMDYLTKNKDFFYEGEKATLEEQIGLENKFYRMAQTCKEPVIIVCDRGTMDISAYMSPEMWDSITKAVGTSTSELRSRYDAVFHLVSAADGAEQYYTLSTNAQRLEKPDAQGLAIARDLDKKVINAWSGHPHHRIINNHDDFNKKIQRVIYEISAVLGLPQPIENEGKYLVELTGEIPDCIESEITQTYLSADPGVEVRLRRRTWNGKTVIIHHTRTRISATEQIETERPISNNLYRSLMKQADPYRTTIRKNRKSFVWKGQSFELDTYKEPCRGLQILECKGVPSLPEDKFPPFIHVVKDITGNKDYYNYNMALKKPV
>NZ_CP045696.1|WP_154326816.1|514859_515891_-|YihY-family-inner-membrane-protein
MSLRAHISHLSSCARSLYRYCTGEVRHDTSGKWWVRALMTVNLMVSKFLDKRLQDTACNLTYRTVLATVPALAMLFAIGRGFGFQNLMQSELMRYFPAQRRALHEASQFVDSYLLHASQGLFVGIGIVFMLWTLISLMGNVESAFNRIWGVPRDRALARKVVDYTAFLVIIPVTLVCSAGIQIVLSSTLNNALSASSLISPLVHRLLDFTPIVLEWIAFVVAFKLIPNTQVSFKCALASGLVSGTVFYLVEWLFVSGQIYVSNYNAIYGSFAFVLLLLVWLQLSWLIVLAGCVLTYALQHNGDHRDSDGLDAMQQEYLDRMGQASERIIDSLRDKYHDNKNNS
>NZ_CP045696.1|WP_154326815.1|514471_514858_-|reactive-intermediate/imine-deaminase
MKQKVIANNAPAEIGAYSNAIKVGNFVFVSGQLPVNPETGEMPRGLQAQTLQVIENVRRILADAGATLDDVVKTTVLLNEMFQFSEVNEIYAREFTAPYPARTSFAVQELPRQALVSLDVVAVIDHDE
>NZ_CP045696.1|WP_154328953.1|511956_514374_+|endopeptidase-La
MATHVMPIFAEVHNSPADSDNQLSAEQLANLPILPLRNMVLFPGMALPIVIGRDKSMALVKEAMRSKSHIGVVCQVNSKVDDPQLGDLYRVGVVADIIKVLELPDNSTNVILQGLAVMSLDAITQTEPYLRGHVTKLDDTHPKKSDKEFNVLMQSIKEVTFHMLGNMGNSAQELSFAVKNIDSPFYMIDFLASNVPFEPRQKQLMLEERDVKKRAYMLYSFLTREDQLVELKANITSRTREDLSQQQREVFLQQQIRTIQEELGNDGNDSAKLKERAKTKKWSDKAQQWFDKELKKLERLNPQSPDYSVQYSYLDTLLNLPWENYSKDNFNLKRVEAKLNRDHYGLEKVKDRILEHLSVLKLRGDLKAPILCLYGPPGVGKTSLGRSIAEALNRKYARISLGGLHDEAEIRGHRRTYIGAMPGRIMEALGKCETSNPVIVLDEIDKVGQDFKGDPASALLEVLDPEQNSHFHDNYIDIDYDLSKVLFIATANNLQTISQPLLDRMEVIEINGYIAEEKIEIARRHLVPKQLEENGLEPREIKFPKETLAAIIEKYTRESGVRELEKKIGKLLRKIARLKAQGEADYPTTILPKDLKGFLGAEEYHSDNYEGNDFAGVVTGLAWTAVGGEILYIESSLSRAGKSGEKLTLTGNLGDVMKESAVIALEYIKAHSQQFGIDYQLFDKYNVHIHVPEGAIPKDGPSAGVTMVTSLVSSFTQRKVRGRLAMTGEITLRGKVLPVGGIKEKILAAKRAGITDIVLCKENKRDIDEIKEMYLKGLTFHYVDTIKDVIDYALLPEKVNDAIAL
>NZ_CP045696.1|WP_154326823.1|522288_522966_-|hypothetical-protein
MIYLIFIAITILSYSVQQSLKSKFQKYSRIPIGGGMRGQDVARRMLSDNRIAGVQVTSTRGTLTDFYNPSNLTVNLSEGVYEANSVAAAAVAAHECGHAVQHATGYGPLRLRTALVPAVEFASQWVTWVILAGILLVQVFPAVLGIGVALFAVTTLFSFITLPVEIDASRRAIQWLERSGITQGETTAMAKDALRSAAYTYVVAALGSLATLVYYAMIFFGNRRD
>NZ_CP045696.1|WP_154326824.1|523049_523535_-|GAF-domain-containing-protein
MENIVSNSRAAHKHVLYRQAAQQVASLISGVDNPVGALANVTAVLNDTFSHYLWVGFYRVDGDVLKLDVFQGSPACYTIARGKGVCGTAWAMATTLIVPDVHNFPGHIACSSLSRSEIVVPVVREGRVVAVIDVDSDSLDAFDMADREGLEKIAAIVEPLL
>NZ_CP045696.1|WP_154326825.1|523664_523829_-|rubredoxin
MKKYICDVCGYVYDPAVGDPDNDIPAGTAFEDLPDSWLCPLCGVGKDEFSVVEE
>NZ_CP045696.1|WP_154326826.1|523900_524446_-|redoxin-domain-containing-protein
MTTIYDFNLLDKKGNSVSLAQYKGKVLLVVNTATGCGFTPQYEDLESMYHRLKDKGLEILDIPCNQFGHQAPGSDDEIHEFCTLKFGADFPQFKKSDVNGAGELPLYTWLKSQKGFVGQYDPKLAAVMEKLYNESNPEPRKHDDIQWNFTKFLIDREGKVVARFEPTLDMKEVEAQVEALL
>NZ_CP045696.1|WP_154326827.1|524952_526212_+|divalent-metal-cation-transporter
MINIVKELKCRTHPHVLGGLDILRNIGPGLLVTVGFIDPGNWASNFAAGSEYGYTLLWVVTLSTIMLIALQHNVAHLGIVTGLCLSEAAVKYSPRWVGRPIVITAVLSSISTSLAEILGGAIALQMLFGIPIVWGSILTVAAVLILLFTNSYKKIERAIIFFVSMIGLSFIYELFLVDTDWVEATRCAFVPSIPQGSLLIVMSVLGAVVMPHNLFLHSEVVQSREINKHGDERIRQMLKYEFADTLFSMLVGWAINSAMILLAATTFYSQGTHVEELGQAQAMLQPLLGNNAATIFAVALLLAGISSTITSGMAAGSIFAGLFGESYNAHDTHSVVGILISLGVSLVIIFTISDPFQGLIYSQMALSIQLPFTVFLQVSLTSSKKVMGKYANRPLNTIFLYSLAAIVTLLNIALFIESL
>NZ_CP045696.1|WP_154326828.1|526221_527403_-|tetratricopeptide-repeat-protein
MKTFSTLVLFLLVSLVTTATPRPVDVLRLDSVANQQFASKQYVDAVKTRQQLIASLNPGDNDSLHAFSLVQIARCLSREELADSAATVGKQALYVYSRAFGTQSMDYAIIADNVSFYLLQAKRYQEAVSYSEKALAVINSVPDLTGSYVDESIILVHAAENYNAVGRNPLAIACELRALRLMSDIYGEHSDTYIDELQFLSKFFADNGDKEKAGQTDDTITRLRKEKKDAGGNVLDIPATVKMDSPREAERYRWATLRACDYYLSHYITADHMAEAASLIAQWVTVTDEVTVTLDSSLLDLGNNQQQSLAYLPAFLAGCCRYALQSGEKDFSWGMYGTAMADLLNFYNANAPYTGKVDSLEKLIAAYAKNRDQFVDNLKQLYNRAMDGRKQQR
>NZ_CP045696.1|WP_154326829.1|527556_527916_+|hypothetical-protein
MTTKTNRRIIITKFTRHNRRLIAIALLAILFNFVVVKSGHIIFESQLRGVTTEHTGAPAKSSVGGDCAVCQFVLSSAVAPVESAPAVSILVLFIAPAAVVSRRCQGSINLKTPRAPPRL
>NZ_CP045696.1|WP_154326830.1|528022_530410_+|TonB-dependent-receptor
MKHIIMVVALLCCVMAMGATTISNSSNQASLQGYVTDAQDGDTLIGVTVALPELNIATTTDAKGHYSFRGLPQLTTTIQVSFLGHENITQQVNLAAAGRLDFVLKENSAMLKEVIVTGLTGKVLRKNSPTPVSVLTAREMQGTLSTNIIDAVAHEPGVAQVTTGTGISKPVIRGMGYNRVVVVNDGVRQEGQQWGDEHGIEIDPQSVSSVEILKGPASLMYGSDALAGVLIMHNDPVLSEGRLQANVVSQYQTNNGLLGYSLNMGGNQNGLVWNARYSQKLAHAYSNRYDGYVQNSQMREDAFNGLLGLNKSWGYSHLTFTYYHLKPGIVEGDRDEATGQFTRPAIAGGQEAEVIATSHDFHSYQPSLPYQHIHHYKAVLNNAFYLPKGSLRATVGYQRNRRQEYEDVLTPEQPGLDFLLHTVNYDAHYVSPQSQNWKIAAGINGMYQHSLNKGEECLVPAYNLFDLGIFATASYDLDRFHLSGGVRWDNRHLHAKALTEDDKTRFDDFARNMGAVSGSLGAIYNINEKVNLRINIARGFRAPNISELGSNGVHEGTLRYERGNQDLKPEYSWQFDLGFDYSSALVSAQLSLFANRIENYIFAHRLTQADGQAVLTDGYETFQYSAGNARLMGGEAVVDLHPVPKLHFSNSFSMVDAVQLHQHGQFRHLPYIPAHRWISQIKYDIVHDGRYISNTYAAIEIDCNFKQNHFYGAYGTETATPAYTLLNASAGTDILWKGRRVASVYITGSNLTNKAYQSHLSRLKYADKNQATGRTGVYNMGRNIGFKLVVPIDIK
>NZ_CP045696.1|WP_154326831.1|530620_531550_-|acyltransferase-family-protein
MKYSKDIDFFRAILICLVILVHIVNFGNIHPLAKSAILSFMMPTFLVITGYLVNIDKTIREFLRYIGQILLPYVIRVTGYAVLSLYLPVRDGIKVFNLSTILDIICIKSIGPYWFLHVMIVCGVIYYFAFHISRKIDITARYSIFAALLIITALFTPFLSLEAAFYYFVGVGIRQYCKDFSRVYLNSFWPLLPFGLLVVHPRFHGWGTISVLVCVFSFLSFSSYFICFFKGRTKSIIEYIGRNTFPIYIFHPMFTMLSKFLSPAFKWDFTGLSHAILIIVIGVAGSICIAKVLDWSHLSYLLGKKKILR
>NZ_CP045696.1|WP_154326832.1|531867_532479_-|HAD-IA-family-hydrolase
MKYRNVIFDLGNVLVALDNEACARALTAIGCECLVRVNDDPAVRRLFDQLGLGLISNVQFYAQVRRLTGTTATDAQIDTACNAMLTVIPDVKKQRLLDLRRAGCHTFLLSNTIDIHWRYCVEHLFPYNGYGVPDYFDRAFVSQVMHLAKPDRKIFETVIEQTGIDPHHTLFIDDLQENCDAAAQLGIDVYCNAHFNDWLSLEL

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Crispr_ID: NZ_CP045696_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_3

682857-683876

TypeV-A

Consensus_repeat	Method
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CRISPRCasFinder
ATCTACACATAGTAGAAATTANAGGCTTTATGTAGCC	CRT
CAATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCCC	PILER-CR
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	PILER-CR

15 spacers

cas2,cas1,cas4,cas12a

The CRISPR arrays of NZ_CP045696_3

>merge|NZ_CP045696|3|682857-683876|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
CACTACACATAGTAGAAATCATAGACTTTAAGTGGCCACCCTCACGGGCTTGGCGCATAGAAATATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCCGTATGCATCTTTATCGTTCAGCAGCCAATCTACAAATAGTAGAAATTATAGGCTTTAAGTAGCCCAAAAACTATGGCAGACCCTACCACTTCAATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCCCGGCACAGGCTAAAGGCCTCTGCCGAAAAATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCGCTTTGTCATAGTCATAGCTCAAGCCCTCATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCATAAAATTGTGCAAAAAAGAGGGACGCAGAATCTACACATAGTAGAAATTACAGGCTTTATGTAGCAGCTTATCTGCGACAGAAAGAAGTCGTTCTATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCTCGCTGATTACTCCCTGTGGAAGTTCGCATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCCGAGTCCACAGGGCGTCGAATATTGCATATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCTCATCAGAGAGACAGCCGCCGCGCTCTTTCATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCCGACACGATACGCGGCTTGTACAAGTCGATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCCAAGCGTTTACGCATTTACGCATACAAGTGATCTACACATAGTAGAAATTATAGGCTTTATGTAGCCTTGTTGCTGTGCACGGTGTCGCAGCGGATCTACACATAGTAGAAATTATAGGCTTTATGTAGCCCATGGTGGCGGAAAAACAGCGCGAGGAATAATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCCCGGCTGGCACGTCGGTGAGTTGGTCAAATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC

>NZ_CP045696|3|3|682857-683876|CRISPRCasFinder
CACTACACATAGTAGAAATCATAGACTTTAAGTGGCC	ACCCTCACGGGCTTGGCGCATAGAAAT
ATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCC	GTATGCATCTTTATCGTTCAGCAGCCA
ATCTACAAATAGTAGAAATTATAGGCTTTAAGTAGCC	CAAAAACTATGGCAGACCCTACCACTTCA
ATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCC	CGGCACAGGCTAAAGGCCTCTGCCGAAAA
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	GCTTTGTCATAGTCATAGCTCAAGCCCTC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	ATAAAATTGTGCAAAAAAGAGGGACGCAGA
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCA	GCTTATCTGCGACAGAAAGAAGTCGTTCT
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCGCTGATTACTCCCTGTGGAAGTTCGC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGAGTCCACAGGGCGTCGAATATTGCAT
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCATCAGAGAGACAGCCGCCGCGCTCTTTC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGACACGATACGCGGCTTGTACAAGTCG
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CAAGCGTTTACGCATTTACGCATACAAGTG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	TTGTTGCTGTGCACGGTGTCGCAGCGG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	CATGGTGGCGGAAAAACAGCGCGAGGAATA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC	CGGCTGGCACGTCGGTGAGTTGGTCAA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC

>NZ_CP045696|3|1|682857-683876|CRT
CACTACACATAGTAGAAATCATAGACTTTAAGTGGCC	ACCCTCACGGGCTTGGCGCATAGAAAT
ATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCC	GTATGCATCTTTATCGTTCAGCAGCCA
ATCTACAAATAGTAGAAATTATAGGCTTTAAGTAGCC	CAAAAACTATGGCAGACCCTACCACTTCA
ATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCC	CGGCACAGGCTAAAGGCCTCTGCCGAAAA
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	GCTTTGTCATAGTCATAGCTCAAGCCCTC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	ATAAAATTGTGCAAAAAAGAGGGACGCAGA
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCA	GCTTATCTGCGACAGAAAGAAGTCGTTCT
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCGCTGATTACTCCCTGTGGAAGTTCGC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGAGTCCACAGGGCGTCGAATATTGCAT
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCATCAGAGAGACAGCCGCCGCGCTCTTTC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGACACGATACGCGGCTTGTACAAGTCG
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CAAGCGTTTACGCATTTACGCATACAAGTG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	TTGTTGCTGTGCACGGTGTCGCAGCGG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	CATGGTGGCGGAAAAACAGCGCGAGGAATA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC	CGGCTGGCACGTCGGTGAGTTGGTCAA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC

>NZ_CP045696|3|1|682919-683088|PILER-CR
ATATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCCG	TATGCATCTTTATCGTTCAGCAGC
CAATCTACAAATAGTAGAAATTATAGGCTTTAAGTAGCCC	AAAAACTATGGCAGACCCTACCACTT
CAATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCCCGGCACAGGCTAAAGGCCTCTGCCGAAAAATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCGCTTTGTCATAGTCATAGCTCAAGCCCTCATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCATAAAATTGTGCAAAAAAGAGGGACGCAGAATCTACACATAGTAGAAATTACAGGCTTTATGTAGCAGCTTATCTGCGACAGAAAGAAGTCGTTCTATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCGCTGATTACTCCCTGTGGAAGTTCGC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGAGTCCACAGGGCGTCGAATATTGCAT
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCATCAGAGAGACAGCCGCCGCGCTCTTTC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGACACGATACGCGGCTTGTACAAGTCG
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CAAGCGTTTACGCATTTACGCATACAAGTG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	TTGTTGCTGTGCACGGTGTCGCAGCGG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	CATGGTGGCGGAAAAACAGCGCGAGGAATA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC	CGGCTGGCACGTCGGTGAGTTGGTCAA


>NZ_CP045696|3|2|683316-683876|PILER-CR
	TATGCATCTTTATCGTTCAGCAGC
CAATCTACAAATAGTAGAAATTATAGGCTTTAAGTAGCCC	AAAAACTATGGCAGACCCTACCACTT
CAATCTACACATAGTAGAAATTATAGGCTTTAAGTAGCCCGGCACAGGCTAAAGGCCTCTGCCGAAAAATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCGCTTTGTCATAGTCATAGCTCAAGCCCTCATCTACACATAGTAGAAATTACAGGCTTTATGTAGCCATAAAATTGTGCAAAAAAGAGGGACGCAGAATCTACACATAGTAGAAATTACAGGCTTTATGTAGCAGCTTATCTGCGACAGAAAGAAGTCGTTCTATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCGCTGATTACTCCCTGTGGAAGTTCGC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGAGTCCACAGGGCGTCGAATATTGCAT
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	TCATCAGAGAGACAGCCGCCGCGCTCTTTC
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CGACACGATACGCGGCTTGTACAAGTCG
ATCTACACATAGTAGAAATTACAGGCTTTATGTAGCC	CAAGCGTTTACGCATTTACGCATACAAGTG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	TTGTTGCTGTGCACGGTGTCGCAGCGG
ATCTACACATAGTAGAAATTATAGGCTTTATGTAGCC	CATGGTGGCGGAAAAACAGCGCGAGGAATA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC	CGGCTGGCACGTCGGTGAGTTGGTCAA
ATCTACAAATAGTAGAAATTATAGGCTTTATGTAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154326942.1\|673827_675645_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379536
NZ_CP045696.1\|WP_154326950.1\|684053_684323_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP045696.1\|WP_154326958.1\|691887_693306_+\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	unknown	unknown	gnl\|CDD\|274398
NZ_CP045696.1\|WP_154326943.1\|675847_676564_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319786
NZ_CP045696.1\|WP_154326955.1\|690163_690487_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223394
NZ_CP045696.1\|WP_154326949.1\|682087_682684_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|183878
NZ_CP045696.1\|WP_154326956.1\|690543_691008_-\|FMN-binding-protein	unknown	unknown	gnl\|CDD\|377242
NZ_CP045696.1\|WP_154326948.1\|680532_681291_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP045696.1\|WP_154326953.1\|685861_689635_-\|type-V-CRISPR-associated-protein-Cas12a/Cpf1	cas12a	cas12a_cpf1_CAS-V-A	gnl\|CDD\|275131
NZ_CP045696.1\|WP_154326951.1\|684319_685249_-\|type-V-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|213942
NZ_CP045696.1\|WP_154326954.1\|689943_690177_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154326959.1\|693326_695168_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|238233
NZ_CP045696.1\|WP_154326957.1\|691267_691828_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|376519
NZ_CP045696.1\|WP_154326952.1\|685232_685856_-\|type-V-CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|213941
NZ_CP045696.1\|WP_154328961.1\|681350_682088_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|240083
NZ_CP045696.1\|WP_154326947.1\|679833_680466_-\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	unknown	unknown	gnl\|CDD\|235067
NZ_CP045696.1\|WP_154326944.1\|676576_676912_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154326945.1\|677017_677782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328960.1\|678606_679761_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP045696.1\|WP_154326946.1\|678175_678472_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154326942.1\|673827_675645_+\|hypothetical-protein	gnl\|CDD\|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	2.69259e-08
NZ_CP045696.1\|WP_154326950.1\|684053_684323_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.49074e-09
NZ_CP045696.1\|WP_154326958.1\|691887_693306_+\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	3.67185e-120
NZ_CP045696.1\|WP_154326943.1\|675847_676564_+\|hypothetical-protein	gnl\|CDD\|319786	cd02587, HAD_5-3dNT, 5'(3')-deoxyribonucleotidase. This family includes cytosolic 5'(3')-deoxyribonucleotidase (cdN) and mitochondrial 5'(3')-deoxyribonucleotidase (mdN). cdN and mdN specifically dephosphorylate the deoxyribo form of nucleoside monophosphates helps maintain homeostasis of deoxynucleosides required for mitochondrial DNA synthesis. Their preferred substrates are dUMP and dTMP. cdN also dephosphorylates dGMP and dIMP efficiently. They can also dephosphorylate the 5'- or 3'-phosphates of pyrimidine ribonucleotides. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.20583e-20
NZ_CP045696.1\|WP_154326955.1\|690163_690487_+\|hypothetical-protein	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	3.42322e-05
NZ_CP045696.1\|WP_154326949.1\|682087_682684_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|183878	PRK13181, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	1.67768e-98
NZ_CP045696.1\|WP_154326956.1\|690543_691008_-\|FMN-binding-protein	gnl\|CDD\|377242	pfam04205, FMN_bind, FMN-binding domain. This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.	1.26108e-10
NZ_CP045696.1\|WP_154326948.1\|680532_681291_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	1.36672e-153
NZ_CP045696.1\|WP_154326953.1\|685861_689635_-\|type-V-CRISPR-associated-protein-Cas12a/Cpf1	gnl\|CDD\|275131	TIGR04330, conserved_hypothetical_protein, CRISPR-associated protein Cpf1, subtype PREFRAN. This family is the long protein of a novel CRISPR subtype, PREFRAN, which is most common in Prevotella and Francisella, although widely distributed. The PREFRAN type has Cas1, Cas2, and Cas4, but lacks the helicase Cas3 and endonuclease Cas3-HD.	0
NZ_CP045696.1\|WP_154326952.1\|685232_685856_-\|type-V-CRISPR-associated-protein-Cas4	gnl\|CDD\|213941	TIGR04328, hypothetical_protein_HMPREF9709_01098, CRISPR-associated protein Cas4, subtype PREFRAN. Members of this family are the Cas4 protein of a novel CRISPR subtype, PREFRAN, found in Prevotella bryantii B14, Prevotella disiens FB035-09AN, Francisella tularensis subsp. novicida, Francisella philomiragia, Butyrivibrio proteoclasticus B316, Helcococcus kunzii ATCC 51366, etc.	1.67673e-78
NZ_CP045696.1\|WP_154326957.1\|691267_691828_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|376519	pfam01300, Sua5_yciO_yrdC, Telomere recombination. This domain has been shown to bind preferentially to dsRNA. The domain is found in SUA5 as well as HypF and YrdC. It has also been shown to be required for telomere recombniation in yeast.	2.17623e-51
NZ_CP045696.1\|WP_154326959.1\|693326_695168_+\|CBS-domain-containing-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	2.64837e-107
NZ_CP045696.1\|WP_154326951.1\|684319_685249_-\|type-V-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|213942	TIGR04329, hypothetical_protein_SbacW_07302_partial, CRISPR-associated endonuclease Cas1, subtype PREFRAN. Members of this family are the Cas1 endonuclease of a novel CRISPR subtype, PREFRAN, found in Prevotella bryantii B14, Prevotella disiens FB035-09AN, Francisella tularensis subsp. novicida, Francisella philomiragia, Butyrivibrio proteoclasticus B316, Helcococcus kunzii ATCC 51366, etc.	8.98417e-124
NZ_CP045696.1\|WP_154328961.1\|681350_682088_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|240083	cd04732, HisA, HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.	1.74785e-89
NZ_CP045696.1\|WP_154326947.1\|679833_680466_-\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	gnl\|CDD\|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	3.16375e-113
NZ_CP045696.1\|WP_154328960.1\|678606_679761_-\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	3.76032e-166
NZ_CP045696.1\|WP_154326946.1\|678175_678472_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.09555e-38

>NZ_CP045696.1|WP_154326949.1|682087_682684_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MSVAIIKYNAGNVFSVKCALQRIGVEAVITDDAAVLRRAERVIFPGVGQAATAMDYLRAKGLDTVIKSLTQPVLGICIGLQLLCRSSQEGDTQGLGIFDLDVKRFDNSACPELKIPHMGWNTIELAGASALIPAELEGRHVYYVHSYYAPVGRDTIATTRYIVPFSAALHRGNFYATQFHPEKSGDVGELVLKKFIDL
>NZ_CP045696.1|WP_154328961.1|681350_682088_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MDIVPAIDIMGGKCVRLSRGDYSTEKVYNEEPLDVARALEDAGCTRLHLVDLDGARSQHIVNYRTLERIAGHTGLLIDFGGGLKTDHDLHIAFDSGASQVTGGSVAVSHPQVMEGWLRKYGPQAIILGADARNGKISTCGWLDDSEQQVVPFIEHYASLGVTQVISTDIDKDGMLQGPSIELYKSILARLPRLRLIASGGVSGLPDVYALDAIGVPAVIVGKAIYENKISLKALEAFNVSRAAGQ
>NZ_CP045696.1|WP_154326948.1|680532_681291_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MLAKRIIPCLDVKDGATVKGVNFVNLRNAGDPVELGKKYSDEGADELVYLDITASLEGRDTFVDLVRRVAARVAIPFTVGGGIATVAHVERLLGAGADKISVNSAALEHPQLIGDIAAAFGSQVCVVAIDARQDTDGEWICYARGGHEPTRRHLLEWAHEAQERGAGEILFTSMDHDGMKQGFACKALRQLHEALSIPVIASGGGGTMQHFAEALGEGCADAALAASVFHFGEISIGDLKRYLSQHHIDVRL
>NZ_CP045696.1|WP_154326947.1|679833_680466_-|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE
MNSNIDFDKMGGLIPAIVQDSRTKNVLMLGFMNHEALEKTLKTKKVTFWSRTRNKLWTKGEESGHYLELVSVDVDCDSDTVLVQAIPNGAVCHLGMATCFGDRNEMGLEFLGYLQDFIDKRRAEMPQGSYTTSLFNAGINRMAQKVGEEAVETALEAVNGTNGRLVYEASDLLYHLIVLLSAKGLRIEDVVADLESRHGKKKDDYDKHRD
>NZ_CP045696.1|WP_154328960.1|678606_679761_-|diaminopimelate-decarboxylase
MMYRFPLEEFKQWPTPFYYYDMGLLSKTLNEINRQVKGYPYDVHYAIKANGNPVILKEIVKNGLGVDLVSGGEIKASLAAGFDPGKMVYSGVGKTDWEINLGLDHDIFCFNVESVPELEVINELAGRRGKTAHVAIRVNPDIDAHTHRYITTGTAEDKFGINIEMLATAVDRALKLPHLHLRGLHFHVGSQITQMKPFVMLCESVNGLLDYFDRHDIHFELINVGGGLGIDYDTPDINPVPDFQHFFDTFKRHLRLRRNQRLHFELGRSIVAQCGTLIARVIYVKENRNKKFVILDAGMTDLIRPALYQAHHVIQNISAAVDTASDVYDVVGPICESSDVFGTDEKLPVTRRGDLVALRSAGAYGETMASCYNMRPLPKSHFSR
>NZ_CP045696.1|WP_154326946.1|678175_678472_-|thioredoxin
MNNFQELIASDKPVLVDFFATWCGPCKMMHPILEDISKQVGDRAKVVKIDVDQAEDLAMQYRIQSVPTLMIFKQGEMLWRESGVHDAATMVQLLEKYM
>NZ_CP045696.1|WP_154326945.1|677017_677782_+|hypothetical-protein
MTDAKGNKLWAVGDTVYYIADRTTYAVRKSVVKEISQRGELFIYEIKLKLEKAKSRDLNFKHKLAICGKVYANIASFALLTPPANDKNGIDDFTRKLTDSTVKAVPVKDMNSQGKLACCLFNEKFESVAKLAGRLGLPDLFFCHTSEEDLVCEFWRKEQTDRPCDRALNPYLLISKSITWEHDCNVSSVCTAIDDSFRCVVDISTFDRVNEELEAGIQRVIKKFNRLNPEDVLPFAFNHVGQYPTTCKKLPIGR
>NZ_CP045696.1|WP_154326944.1|676576_676912_+|hypothetical-protein
MIKKKDIIPPTVYDIYIRGEEGNLNCVKKVVNELARYCGVTDSCPDKLYIPLKFMMKLLVGSDNHSGYVVSMNTDDPECVVLHTETEEPQSICNAFKDCFIDIVIDFKKAG
>NZ_CP045696.1|WP_154326943.1|675847_676564_+|hypothetical-protein
MNNYAKPIVYFDMDNVLVDFQSGVDKIPAEVKAQYECDAKGKPHYDDIPGIFSKMEPFKGAIEAVKKISAEYEVFILTTAPWNNPSAWSDKLEWVKKHFPKEFHKRVIISHHKDLLKGDFLIDDRGDKGQSDFEGEWIEFGSKEFPDWPTVTDYLLNDLKKLKEAHDHSFKNKSELMKSRVCGCFYCLATFNPKEIVNFIDDGKTALCPKCGVDSVIGDASGYPVTNEFLNKMCRYWF
>NZ_CP045696.1|WP_154326942.1|673827_675645_+|hypothetical-protein
MEKITNFLAKVGAKREQEMTQKQIGASMIENLLSAFNNNPRNSKVVEYIFRQNLFDMIGKSRHEMVHSKMIAELLAGRYFDLSKKATLMHFLDIVVMRAKEQGVTISQDFCNLVLTRSLQVDSLTDKQTEYPLCDYAKNDSIDKKERLDVYLRYNLANTIKSSKNKVIEIFIENKVLSMEHDQQTQKYYDACSDGRKALQLFIYLSPINPRSLSNYAEVPEDMKPTCSDCSGNPIYVHICYQDILDKVIMPLIEEKQMNNRDAVILEEYASCLELPALPDNDEKIGAKELSIMAVSDYEKQLLLEFMSNEDNARLLETAVNHHLQRELYSFGGDNCLSFEASLQAALRKYTNENGELKSQKDFRDIFGAQNGGARFLIYVVKETNEKLYYIPTHLFEYNGKAYKTITDALKVAVKDYISRERKTISDVIKDFECIYSRQKFHPHVFKDNADLGRDTIKAIHYSQTSFTGLYIRDDISQDKLTKINEILGNGFGIKPISAQCYHELLLCGDDTLWDCYDKSLFNALKGTSYYYRKGAERQIEAINRVLPMPIQNSSLTNADCDLLERFYANNRKLIISIYRILIENEPDLVVYNQRKEDYKKLLKN
>NZ_CP045696.1|WP_154326950.1|684053_684323_-|CRISPR-associated-endonuclease-Cas2
MKIISYDIGDDRWRARFTRMLVKHGAIRLQYSVYEVANTKRVMDNLTAKIEAWAKHFTLDDSVIIFDVDENKMIKYGNAIHRDKPVVFL
>NZ_CP045696.1|WP_154326951.1|684319_685249_-|type-V-CRISPR-associated-endonuclease-Cas1
MEHTRSLRVMNGELMLEEFDGNKKSTLTKFPFQKILALFVIGHITVTTPLIDKCRKHGVAVVVMKPNLRPVFFFACSAEANYLLRKRQYDYTDSELSVARSLMISKFNNQKTLLEKTRRRDELTIAAISFCASAVNKLKDTIDYNELMGLEGQVAKFFFIAYYQDFDWKGRHPRSKCDALNVTLDIGYTILFNFVESYLRLFGFDLYKGVYHRLWFQRKSLVCDIVEPFRCIIDHATLLAFHRGQFSSTHFVKVKEEFHLKYEKCSDYYKVYFNALISYKMEIFKYVQQYYRCFMGRKSASQYPIFQYK
>NZ_CP045696.1|WP_154326952.1|685232_685856_-|type-V-CRISPR-associated-protein-Cas4
MEDFIAIATLNDFIFCPYSIYLHSVYADTDDGLYKATPQVRGTIAHTGVDSKKGSSRRGDIMSLSVYSESLHVYGKIDVYRAEKKQLIERKYSLKTIFRGQLYQLWAQYFCMTEMGFPVEELCFYEISAKKMIPVNLPTENDRVELERFLTLFRNYSPLNDTKMTNPNKCAHCIYCNLCDKTDSDNVYSIRYSDAYHFCAQLHGTHS
>NZ_CP045696.1|WP_154326953.1|685861_689635_-|type-V-CRISPR-associated-protein-Cas12a/Cpf1
MKYTDFTGIYPVSKTLRFELIPQGSTVENMKREGILNNDMHRADSYKEMKKLIDEYHKVFIERCLSDFSLKYDDTGKHDSLEEYFFYYEQKRNDKTKKIFEDIQVALRKQISKRFTGDTAFKRLFKKELIKEDLPSFVKNDPVKTELIKEFSDFTTYFQEFHKNRKNMYTSDAKSTAIAYRIINENLPKFIDNINAFHIVAKVPEMQEHFKTIADELRSHLQVGDDIDKMFNLQFFNKVLTQSQLAVYNAVIGGKSEGNKKIQGINEYVNLYNQQHKKARLPMLKLLYKQILSDRVAISWLQDEFDNDQDMLDTIEAFYNKLDSNETGVLGEGKLKQILMGLDGYNLDGVFLRNDLQLSEVSQRLCGGWNIIKDAMISDLKRSVQKKKKETGADFEERVSKLFSAQNSFSIAYINQCLGQAGIRCKIQDYFACLGAKEGENEAETTPDIFDQIAEAYHGAAPILNARPSSHNLAQDIEKVKAIKALLDALKRLQRFVKPLLGRGDEGDKDSFFYGDFMPIWEVLDQLTPLYNKVRNRMTRKPYSQEKIKLNFENSTLLNGWDLNKEHDNTSVILRREGLYYLGIMNKNYNKIFDANNVETIGDCYEKMIYKLLPGPNKMLPKVFFSKSRVQEFSPSKKILEIWESKSFKKGDNFNLDDCHALIDFYKDSIAKHPDWNKFNFKFSDTQSYTNISDFYRDVNQQGYSLSFTKVSVDYVNRMVDEGKLYLFQIYNKDFSPQSKGTPNMHTLYWRMLFDERNLHNVIYKLNGEAEVFYRKASLRCDRPTHPAHQPITCKNENDSKRVCVFDYDIIKNRRYTVDKFMFHVPITINYKCTGSDNINQQVCDYLRSAGDDTHIIGIDRGERNLLYLVIIDQHGTIKEQFSLNEIVNEYKGNTYCTNYHTLLEEKEAGNKKARQDWQTIESIKELKEGYLSQVIHKISMLMQRYHAIVVLEDLNGSFMRSRQKVEKQVYQKFEHMLINKLNYLVNKQYDAAEPGGLLHALQLTSRMDSFKKLGKQSGFLFYIPAWNTSKIDPVTGFVNLFDTRYCNEAKAKEFFEKFDDISYNDERDWFEFSFDYRHFTNKPTGTRTQWTLCTQGTRVRTFRNPEKSNHWDNEEFDLTQAFKDLFNKYGIDIASGLKARIVNGQLTKETSAVKDFYESLLKLLKLTLQMRNSVTGTDIDYLVSPVADKDGIFFDSRTCGSLLPANADANGAFNIARKGLMLLRQIQQSSIDAEKIQLAPIKNEDWLEFAQEKPYL
>NZ_CP045696.1|WP_154326954.1|689943_690177_+|hypothetical-protein
MDYRSFIKKLENDGIVYIYDDYEDAIVKFVSSKVAGNTQAWIKRKGRKEREIPQSEPIVLDIMMGGEEVNKNFYDNY
>NZ_CP045696.1|WP_154326955.1|690163_690487_+|hypothetical-protein
MITIEQAIVLATAAMQGLKDLEGNAAILHPLRVMLSGKSDDEKIVGVLHDVPEDTNVGFSQLKEAGCTDAQIEALHFLTHSKDVPYSVVKTSRAGFTRSFFLQLRLI
>NZ_CP045696.1|WP_154326956.1|690543_691008_-|FMN-binding-protein
MSDSNILKKRKVKKMKNILSVALVAAALWAAMPATAQSKVIYTGDIAKKVMGYQGPTPLNITISNGKIESIEALANQESPKYMRRAARGIFPHYIGKTVSQALKLKVDAVTGATYTSNALLQNIKLGLEQARKSGKKTGTAAKKSRKRSSSRRR
>NZ_CP045696.1|WP_154326957.1|691267_691828_+|threonylcarbamoyl-AMP-synthase
MEEDITTCIEVLERGGLILYPTDTIWGIGCDATNPEAVKKVYRLKHRADNKALIVLLDSAEHLDHYVVDVPEMARELIDVAVKPLTIIYDGAYNLAPNLLGDNESVGIRISHEKFSQELCARFGKPVVSTSANVSGEPAAATFAQINPAIVQGVDYVVKYRQDDTAPHSASNIIMLSSDGTFKILR
>NZ_CP045696.1|WP_154326958.1|691887_693306_+|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase
MISERAQRLKYVAGDYITANLAWLGYNCARFAMGGVRGYQSLHTFLTSDVVKLEQVVFPLIMMGVYYLSGYYNEVFRKSRLSELMTTLSSTCVNALITFFIALMNDMTADNRAFNNESVLVLLGIMFALTYVVRAVITGYTSHKIKSRQWSFKTLIIGDGAAAYAFVGKLEHMRASLGYDIVGYVHIPGENGVKDIEKPRYSLDEVAGVCQREGVKELIVVPTKQDSAQLLSAINRLFSINLPIKITPDKYNILLSRARLSDLYGDPLIDISSSNMSAGGQNMKRFCDVVISAVAMVVLIPVYIAVGLIIKCDSHGPVLYKQERLGRHNKPFHIIKFRTMVENAEQQGKPQLSSDADPRITRVGHYLRKYRVDELPQFFNVLRGDMSIVGPRPERRYYAQQILEREPAYSLVHQIRPGITSMGMVKYGYAQNVDEMVERLRYDLLYLENMSLINDLKIIVYTVKIVFTGRGV
>NZ_CP045696.1|WP_154326959.1|693326_695168_+|CBS-domain-containing-protein
MTTTAEPEITTAAASSNEKESKGWYLRLILWREKHIPEKTFVVMLAIVIGIASGLAAVLLKFLISTISTVINSVGVTTQANYYYLLFPIVGILLSGLYVRYVVRDNISHGVTRVLYAIAQKKSRLKTHNMYASLVASSITIGCGGSVGAEGPIVFTGAAIGSNLGQAFRLSPHLLMMLVGCGAAAGIAGIFKAPIAGVLFTVEVLMLDLTAGSVMPLIMASVAGATVSYVFTGYNVEFFFSQSEPFYTSRIPYVIVLGVMCGFVSLYFNKTIGLMEDVFGRMQGRWQRFMLGSVVLSVLIFLFPPLFGEGYGAINNLLNGDVASIFDNSLFYSFRNNTMSTILFVGGLCLFKSFATSATNGGGGVGGTFAPSLYVGCMAGFFFAYTLNAVGFASPSVPLSIKNFALLGMAGVMAGVMQAPLMAIFLTAEMTGGYSLFLPLLIVAAISYGTCRVFTPYSIYTKRLAKRGELLTHQKDQSVLTLLKMDSVIETDFIPVHPDMCLKQMVDVISKSKRNLFPVTDNDNNLLGVVLLDDIRNIMFRPDLYRRMKVERFMSMPPAKVELGTPMEKVMKTFDDTKAWNLPVVDKGKYVGFVSKSKIFNSYRQVLKHYSYD

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Crispr_ID: NZ_CP045696_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_4

1556888-1557726

Orphan

I-B

Consensus_repeat	Method
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	CRISPRCasFinder
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CRT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	PILER-CR

11 spacers

The CRISPR arrays of NZ_CP045696_4

>merge|NZ_CP045696|4|1556888-1557726|CRISPRCasFinder,CRT,PILER-CR
CCCCCAATCCTTGTTGTAGTGGAATATGGTCTCTGACTGGCTTCACAATGCTGGTATAAGATTAAAATGGCTGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACAGTAAAGAAACTGGTGAGATTGTAACTGGGATCCTGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACACAGAGAAATTCAATGAGACATTAAAAGTTCTTCAGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACAACTTCGCCATTGTGGAGGCTGACGGTACTCGCACCAGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACCTACAAGTGGTGAAACCCGTGAAGCCAACTACATGGAGTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGACACTGCCAAGGGAGAAACAATCTACAATTTTGCAATTGGTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGACAAAATGACGAAATATGCTCTAAAAAATCATGTTTGTGTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGACCTATGACTATACAGTTACCTTAAAAGAGCTAATACAGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACATCACAAGTGTTGAAAGCAAGAGCAATGACTGGTAGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACATCACTGTTATGCAGTGAATCACCCAAACCTGAAAGGGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGACCTATAAAAAATCATTGGTATGCAATAACTACAACTGTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC

>NZ_CP045696|4|4|1556888-1557726|CRISPRCasFinder
CCCCCAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	TGGCTTCACAATGCTGGTATAAGATTAAAATGGCT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	AGTAAAGAAACTGGTGAGATTGTAACTGGGATCCT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ACAGAGAAATTCAATGAGACATTAAAAGTTCTTCA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	AACTTCGCCATTGTGGAGGCTGACGGTACTCGCACCA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CTACAAGTGGTGAAACCCGTGAAGCCAACTACATGGA
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	ACTGCCAAGGGAGAAACAATCTACAATTTTGCAATTG
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	AAAATGACGAAATATGCTCTAAAAAATCATGTTTGT
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	CTATGACTATACAGTTACCTTAAAAGAGCTAATACA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ATCACAAGTGTTGAAAGCAAGAGCAATGACTGGTA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ATCACTGTTATGCAGTGAATCACCCAAACCTGAAAGG
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CTATAAAAAATCATTGGTATGCAATAACTACAACT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC

>NZ_CP045696|4|2|1556888-1557726|CRT
CCCCCAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	TGGCTTCACAATGCTGGTATAAGATTAAAATGGCT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	AGTAAAGAAACTGGTGAGATTGTAACTGGGATCCT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ACAGAGAAATTCAATGAGACATTAAAAGTTCTTCA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	AACTTCGCCATTGTGGAGGCTGACGGTACTCGCACCA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CTACAAGTGGTGAAACCCGTGAAGCCAACTACATGGA
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	ACTGCCAAGGGAGAAACAATCTACAATTTTGCAATTG
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	AAAATGACGAAATATGCTCTAAAAAATCATGTTTGT
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	CTATGACTATACAGTTACCTTAAAAGAGCTAATACA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ATCACAAGTGTTGAAAGCAAGAGCAATGACTGGTA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ATCACTGTTATGCAGTGAATCACCCAAACCTGAAAGG
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CTATAAAAAATCATTGGTATGCAATAACTACAACT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC

>NZ_CP045696|4|3|1556960-1557726|PILER-CR
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	AGTAAAGAAACTGGTGAGATTGTAACTGGGATCCT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ACAGAGAAATTCAATGAGACATTAAAAGTTCTTCA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	AACTTCGCCATTGTGGAGGCTGACGGTACTCGCACCA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CTACAAGTGGTGAAACCCGTGAAGCCAACTACATGGA
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	ACTGCCAAGGGAGAAACAATCTACAATTTTGCAATTG
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	AAAATGACGAAATATGCTCTAAAAAATCATGTTTGT
GTCTTAATCCTTGTTGTAATGGAATATGGTCTCTGAC	CTATGACTATACAGTTACCTTAAAAGAGCTAATACA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ATCACAAGTGTTGAAAGCAAGAGCAATGACTGGTA
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	ATCACTGTTATGCAGTGAATCACCCAAACCTGAAAGG
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC	CTATAAAAAATCATTGGTATGCAATAACTACAACT
GTCTTAATCCTTGTTGTAGTGGAATATGGTCTCTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154327557.1\|1554208_1555285_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|273675
NZ_CP045696.1\|WP_154327559.1\|1556097_1556682_+\|hepatitis-A-virus-cellular-receptor-1	unknown	unknown	gnl\|CDD\|225465
NZ_CP045696.1\|WP_154327556.1\|1552920_1553826_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|366631
NZ_CP045696.1\|WP_154327555.1\|1552181_1552784_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366631
NZ_CP045696.1\|WP_154327562.1\|1562088_1562706_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|260003
NZ_CP045696.1\|WP_154327558.1\|1555587_1555983_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|234795
NZ_CP045696.1\|WP_154327568.1\|1571757_1572663_+\|DUF4271-domain-containing-protein	unknown	unknown	gnl\|CDD\|379465
NZ_CP045696.1\|WP_154327561.1\|1561006_1561981_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP045696.1\|WP_154327563.1\|1562671_1564597_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319847
NZ_CP045696.1\|WP_154327564.1\|1565151_1566345_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP045696.1\|WP_154327569.1\|1572678_1573428_+\|uroporphyrinogen-III-synthase	unknown	unknown	gnl\|CDD\|119440
NZ_CP045696.1\|WP_154327566.1\|1567863_1570827_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327551.1\|1546634_1548863_-\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|185053
NZ_CP045696.1\|WP_154327565.1\|1566462_1567485_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327552.1\|1548990_1549848_-\|HAD-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|369792
NZ_CP045696.1\|WP_154327560.1\|1558055_1560824_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP045696.1\|WP_154327554.1\|1550311_1552234_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|280533
NZ_CP045696.1\|WP_154327550.1\|1545265_1545922_+\|DJ-1-family-protein	unknown	unknown	gnl\|CDD\|153229
NZ_CP045696.1\|WP_154327567.1\|1571135_1571720_+\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|129813
NZ_CP045696.1\|WP_154327553.1\|1550103_1550331_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154327557.1\|1554208_1555285_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|273675	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I. This model represents glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the enzyme responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. Forms exist which utilize NAD (EC 1.2.1.12), NADP (EC 1.2.1.13) or either (1.2.1.59). In some species, NAD- and NADP- utilizing forms exist, generally being responsible for reactions in the anabolic and catabolic directions respectively. Two Pfam models cover the two functional domains of this protein; pfam00044 represents the N-terminal NAD(P)-binding domain and pfam02800 represents the C-terminal catalytic domain. An additional form of gap gene is found in gamma proteobacteria and is responsible for the conversion of erythrose-4-phosphate (E4P) to 4-phospho-erythronate in the biosynthesis of pyridoxine. This pathway of pyridoxine biosynthesis appears to be limited, however, to a relatively small number of bacterial species although it is prevalent among the gamma-proteobacteria. This enzyme is described by TIGR001532. These sequences generally score between trusted and noise to this GAPDH model due to the close evolutionary relationship. There exists the possiblity that some forms of GAPDH may be bifunctional and act on E4P in species which make pyridoxine and via hydroxythreonine and lack a separate E4PDH enzyme (for instance, the GAPDH from Bacillus stearothermophilus has been shown to posess a limited E4PD activity as well as a robust GAPDH activity). There are a great number of sequences in the databases which score between trusted and noise to this model, nearly all of them due to fragmentary sequences. It seems that study of this gene has been carried out in many species utilizing PCR probes which exclude the extreme ends of the consenses used to define this model. The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model. [Energy metabolism, Glycolysis/gluconeogenesis].	3.80464e-153
NZ_CP045696.1\|WP_154327559.1\|1556097_1556682_+\|hepatitis-A-virus-cellular-receptor-1	gnl\|CDD\|225465	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane].	0.000400425
NZ_CP045696.1\|WP_154327556.1\|1552920_1553826_+\|restriction-endonuclease	gnl\|CDD\|366631	pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.	0.00114721
NZ_CP045696.1\|WP_154327555.1\|1552181_1552784_+\|hypothetical-protein	gnl\|CDD\|366631	pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.	1.7053e-07
NZ_CP045696.1\|WP_154327562.1\|1562088_1562706_+\|ribonuclease-HII	gnl\|CDD\|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	1.13863e-106
NZ_CP045696.1\|WP_154327558.1\|1555587_1555983_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|234795	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL.	2.63946e-65
NZ_CP045696.1\|WP_154327568.1\|1571757_1572663_+\|DUF4271-domain-containing-protein	gnl\|CDD\|379465	pfam14093, DUF4271, Domain of unknown function (DUF4271). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 221 and 326 amino acids in length.	1.5973e-29
NZ_CP045696.1\|WP_154327561.1\|1561006_1561981_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.80733e-79
NZ_CP045696.1\|WP_154327563.1\|1562671_1564597_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319847	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell. Bacillus subtilis CadA/YvgW appears to transport cadmium, zinc and cobalt but not copper, out of the cell. Functions in metal ion resistance and cellular metal ion homeostasis. CadA/YvgW is also important for sporulation in B. subtilis, the significant specific expression of the cadA/yvgW gene during the late stage of sporulation, is controlled by forespore-specific sigma factor, sigma G, and mother cell-specific sigma factor, sigma E. This subfamily also includes Helicobacter pylori CadA an essential resistance pump with ion specificity towards Cd(2+), Zn(2+) and Co(2+), and Zn-transporting ATPase, ZiaA(N) in Synechocystis PCC 6803. Transcription of ziaA is induced by Zn under the control of the Zn responsive repressor ZiaR. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP045696.1\|WP_154327564.1\|1565151_1566345_-\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	8.21922e-42
NZ_CP045696.1\|WP_154327569.1\|1572678_1573428_+\|uroporphyrinogen-III-synthase	gnl\|CDD\|119440	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.	7.0337e-34
NZ_CP045696.1\|WP_154327551.1\|1546634_1548863_-\|glycosyl-hydrolase	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	8.38145e-97
NZ_CP045696.1\|WP_154327552.1\|1548990_1549848_-\|HAD-hydrolase-family-protein	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.09685e-41
NZ_CP045696.1\|WP_154327560.1\|1558055_1560824_-\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP045696.1\|WP_154327554.1\|1550311_1552234_+\|N-6-DNA-methylase	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	1.09279e-28
NZ_CP045696.1\|WP_154327550.1\|1545265_1545922_+\|DJ-1-family-protein	gnl\|CDD\|153229	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly conserved cysteine located at the nucelophile elbow region typical of these domains. This cysteine been proposed to be a site of regulation of DJ-1 activity by oxidation. DJ-1 is a dimeric enzyme.	2.77742e-52
NZ_CP045696.1\|WP_154327567.1\|1571135_1571720_+\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	1.82582e-47
NZ_CP045696.1\|WP_154327553.1\|1550103_1550331_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.97847e-12

>NZ_CP045696.1|WP_154327559.1|1556097_1556682_+|hepatitis-A-virus-cellular-receptor-1
MRKRLLQLTMLAIVATLGLALTSCEDEDIAYTLEGTWEGNTYMYSYYNDAYYQSTYSYVDFSRDPFTYTSGTGHWIDYYSNAPWDYVANHIYWQVDNGVISIHFEEDNYTISIERYHLNDNHFTGTIYWNRDNDRNFDLVHTSSPNWNSYTWGTGWNYYYAPAAKGDKAKARGNAERPQRVFNPQNIDPARVVK
>NZ_CP045696.1|WP_154327558.1|1555587_1555983_+|large-conductance-mechanosensitive-channel-protein-MscL
MSKFLTEFKEFAMKGNVIDMAVGVIIGGAFGKIVSSLVDNVLMPVLGMITGGLDFSSLDVKVGDATLKYGIFLQNVIDFLIIAFCIFLMIKGINKLMHKKKQEEAPAPAEPSAQEKLLAEIRDLLKQQQQK
>NZ_CP045696.1|WP_154327557.1|1554208_1555285_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MANVKVAINGFGRIGRLAFRQMFAAPGYDVVAINDLTSPKMLAQLLKYDTTHGGYQGIIGGEKKHTVEYKDAQYAEDGRTVTVPGSITVDGKEITIYAKPNAAELPWGELDVDVVLECTGFYTSKAKSEAHLKAGAKKVVISAPAGNDLKTIVFNVNHKTLTADDKIISAASCTTNCLAPMAQALNNVYPIQTGIMQTIHAYTGDQMILDGPQRKGNLRRSRAGACNITPASSGAAKAIGLVLPELNGKLIGAAQRVPVPDGSTTLLYAVVKGKDVTVEKINEAMKAAANESFGYNDEEIVSSDILGMRYGSLFDATQTMVVKIDDDTYEVQVVSWYDNENSYTSQMVRTIKYFAELK
>NZ_CP045696.1|WP_154327556.1|1552920_1553826_+|restriction-endonuclease
MDGFVGNKSGVRKFSDCLTIANSGSVGSAFFHQYEFVASDHVTQLKRDGLDKYAYLFMIPLINRLSEKYSFNREINDNRIRREKLILPTTDEGEIDFTFMSSFMKGVEQDILRTTLKFFNDRQIVKNSKMGGVKWKHFLIRDMFPILVPGKSKGLNHIEKVENGISYLGATNQNNGVLCFVTVDKNLVQKGNCIAFIRNGEGSMGYSVYKAEDFIATSDMTLGYNEHLNKYIGTFITTVADRIRGKYNFGYKRSATRLAKEVLTLPADENGNPDWEYMDSYMRNIENEHILSYFKTLGLAK
>NZ_CP045696.1|WP_154327555.1|1552181_1552784_+|hypothetical-protein
MVEVICLKKKERRNNMSNISEKLWKDFLLTDFFVLEKGNQNNMASLKLGNIPLVSAKKCDNGYKDFVAPNKKKLYKGGIITLNNDGDGGAGIAYYQPYTMALDSHVTALIPKLLMNRHHLLFVAMCITKQRNRFGHGYSLNSNRLRSFRFMLPVDKQGIYPDWQFMEDYMKTKEQQILKPTIEKLCKHLIINNIIMGGGG
>NZ_CP045696.1|WP_154327554.1|1550311_1552234_+|N-6-DNA-methylase
MAKKEIKTDFWVHGLLQEAGLNLTPQGCDIKEVDEALRTASKAQTGNAGYPEYCGVVKDFLLVIEDKASLDKHLAKTEKGLIAQDVKSVKDYAVNGALFYGLHLAANTSYHKVLAFGVSGNEKRHRITPVFINERGDYHELSDVETFISFSENNIDEFYLKEILKEETDVEKTTAEILKDAEKLHNDLRNYGNLTTEQKPLIVSGIMLALREIEYKTFSIDSLVGDTVKTDGQKIYEAIRSNLQRANVTPDTKRDKLLSQFAVIKDTTKINEKDETLGKTPLKHYTEFLYNSIYKNIRYQNSAEDYLGRFYGEFMSYSGGDGQTLGIVLTPKHITELFCELADLKVDDKVLDPCCGTAGFLIAAMHKMVKQTNDEAQRRHIKRDQLFGIELQPYMFTIATTNMILRGDGKSNLHNWDFLKHNPSQLQLKGCTVGMMNPPYSQGSKSNPDLYEISFTEHLLDSLVEGARAIVIIPQSSVTGKSKEEQNIKNNILKHHTLEGVITLNKNTFYGVGTNPCIAVFTAGIPHDKGHKCKFINFEDDGFVVSKHIGLEETASAKDKRQHLLDVWFGRIEAETKFCVETTIEAEDEWLHAFYYFNDEIPTEKDFENTMADYLTFEFNMITHGRGYLFEEERKEEQHE
>NZ_CP045696.1|WP_154327553.1|1550103_1550331_+|helix-turn-helix-domain-containing-protein
MNRIREVLDAKGISQTELANRLGKTFNMVNMYASNKVQPPIPVLYRIADILNVDVRELLISNLINKGCANGEKRD
>NZ_CP045696.1|WP_154327552.1|1548990_1549848_-|HAD-hydrolase-family-protein
MMHNDNIKPSTLYVSDMDGTLLGSDSRLSAASALMLNRAIAGGVLFTVATARTPATVVPLMSGVDTRLPYICLNGAALWDNCRGDYAHVEVIDEATVRRVVGVYRRHGLAPFVYRRHGRMIHACHDGSPLSGQERQFVAERTGLELKRFFLDCDPCGEGSSAAGEAMLIFSMQDYELLRPVCDEVKAQAECTAVLYHDIFDPRSGILEIYAPGVSKAAAIERVAATTQATRVVVFGDNRNDMPMMRAASWSVAVGNAFPEVKAIASEVIGTNVQDAVPKYIIAQK
>NZ_CP045696.1|WP_154327551.1|1546634_1548863_-|glycosyl-hydrolase
MKKIITLCLLLATVLAPAAGEQLPVYLDERQPVEKRIDDALSRMTLDEKIAVIHAQSKFSAPGVKRLGLPDFWTDDGPHGVRPDVLWDEWQQAGHTNDSCVAFPALTCLAATWNPSMARLYGRSLGEEALYRGKNMILGPGVNMCRTPLGGRNFEYMGEDPCLASAMVVPYIQGLQSNGVAACVKHFALNNDEENRFKVNVTVSDRALREIYLPAFEAAVKRGHTWGLMGAYNLYRDQHNCHNRYLLVDLLKGEWNYDGVVVSDWGGTHDTDQAVKNGLDMEFGTWTNGLSAGAKNAYDMYYMAMAYRAGIVSGKYTTRELDDKVRRVLRLYYRTTMARKSGHGFLCSEAHYDAARTIAEQGIVLLQNKRGVLPLKAGTRRLLVVGENAIKMMTVGGGSSSLKAQREILPLDGLKARLGSAVQVDYARGYVGDTTGSYNGVTARQSLAETRSAAQLVAEAVDKARGADYVIVVGGLNKSKHQDCEDHDRLDYGLPYGQDSLVEALARVNSNVVFVNISGNAVAMPWSDKVAAIVQAWYLGSETGTALAAVLAGDVNPSGRLPFTWPRRLADVGAHALGAYPGTWRPGHNIIDEQYKEGIYVGYRWADKHRVKPLFAFGHGLSYTTFAMSGLRLDKRRVAAPDSITATVTVTNTGRRAGAQVVQFYVSDHSTTVDMPVKELRGFARVELQPGESREVSVVLGGHDFQYWDEAGGGWQVSHGRRTLLVGDAADHTPLRADFAVE
>NZ_CP045696.1|WP_154327550.1|1545265_1545922_+|DJ-1-family-protein
MPTGTAFLNTFLTTSSPGCTIFALEKSTVKLHKKNMEKSYVLLADGFETIEALTPVDIFHRLGLDIVQVSTTGSLQVASSHLVHVTADCTLDQADMSQAALIYLPGGYPGYVNLCNNEQVVDLARRQYQSGRLLAAICGAPMVLQAGGIATGSNITCHHSVKDKINDYNIVPDRVVVDRNLVTGAGAGLSLQLSVTLAAMLLGDDERIDHLYHSLELK
>NZ_CP045696.1|WP_154327560.1|1558055_1560824_-|DNA-polymerase-I
MEQKRLFLLDAYALIFRAYYALLRNPRFTSTGINTSAIFGFVNTLQELLKHQSPSHIAVCFDPGGKTFRHEAYAQYKANRSATPEGILVAVPYIKEILKAYNIKVLQVDGYEADDVIGSMTKLAYAHGFDTYMVTGDKDLGQLVNDRTRIFHPGKNEVLGVKEIDELYGLQSPVQVIDLLGLMGDTADNIPGCPGVGPKTAEKLIQQYGSIENLLEHTGELKGSLKKKIEDNREQIVFSKFLATIKTDVPLDWDEEALRRVPVDYVALRKVFAELEFKTLTTRIIDHGEANAGLDGVPLPAAPAGSQPSLFGSEAPAPVEATPAATIKSHEHDYRLIADLDEARAYVAGLMQGQGDIGLHIVAQGQEAMRAHILGFALCGERYHAAYLPLDDFGWMIDVVRPLLAGSRRLVSNDVKRDMVMLHAHGVAWSAPYYDTGVAHYLLQPERNHDTASIAATLVGYAAMSPDDYLGPKGRGQKQLSQLKPEKLSQVACELADLCLWLPPVLDRQLDHEGMTHLLTDIEQPLVEVLASMEMTGARVDVKALADYSVKLTAQVERLEQECYDLAGEHFNTASPSQVGVILFDKLHLDDKAKKTKSGQYSTTEEILVRLRDRHPLVSKILELRGIRKLLSTYVNALPELINPRTGRIHTTYNQTVTATGRLSSTNPNLQNIPVRTDEGKEIRKAFIPSDGNVFFSADYSQIELRLVADFSHDATMLDAFKHGQDIHAITASKIYHEPLESVTPEQRRKAKTANFGILYGISAFGLAQRLDIPRSEAKELIDGYYATFPQVRAYIDRTVAQAKEKGYVTTLYGRRRMLPDINSRNAVVRQFSERNAVNAPIQGTAADVIKIAMVAIYRRFKLEGLKSKMILQVHDELNFDVVPGELETVQRIVVDEMENAYHGDVRLTASHGVAGNWLDAH
>NZ_CP045696.1|WP_154327561.1|1561006_1561981_+|polyprenyl-synthetase-family-protein
MATLDQIQETIKPELAQLNAIIAHTLHSNSALTDHIVKEYLRTKGKQIRPILVLLSGKLFGGVNDKVLYAGAAIELLHNASLIHDDVIDVSSERRGVPTINSVWDNHVAVLVGDYFVAGALKCAEQTHEYRVLNSLSNMGANLSMGEIDQIDNARNHEITEQAYMTIIRRKTASLFVSCVEVGGITAGADDRRLAKLMKYAELLGQCFQIKDDTFDYFHDPIIGKPTGNDLREGKITLPLIYALGRKELPEHDEMNRLVHKATLTDGDIGRLVDYAKASGGIDYAYRVMQRMEKEACQLLDDFEPGPTVDAFKSIFSYIISRNK
>NZ_CP045696.1|WP_154327562.1|1562088_1562706_+|ribonuclease-HII
MELQRYIVEGRIEAGCDEAGRGPLAGPVTAAAVILPPHFHNDIINDSKRLSEKKRNALRPVIEAQALAWAVAWVWPEEIDRINILNASILAMHRALDALKVRPEFVMVDGNRFKPYGDIPYETIVKGDGKMMPIAAASILAKTHRDEYMRKIAQEYPQYGWEHNMGYPTRSHYAAIARYGITPYHRKSFALSKQLSLFDDDERLA
>NZ_CP045696.1|WP_154327563.1|1562671_1564597_-|cadmium-translocating-P-type-ATPase
MEKENKVKLVRIVLSAVLLAAAWALERCTALPMWQLLLVYMVPYLVAGYDVLLESGENIAHGEVFDEDFLMAVATMGALAIGFLPGAENQFPEAVFVMIFFQVGELFEDIAEGRSRRSIAQLMDLRPDTAHVVRSGRELTVAPGEVQVGETLVVKPGEKVPVDGVVLEGRSSLDTVALTGESVPRSVAEGDTVVSGCVNLTGVLKVRAAKAYGESTASKILELVENASSHKSHSESFIARFARVYTPVVVGLALLLAVVPSVVTGQWATWVYRGLVFLVVSCPCALVISVPLTFFSGIGGASRLGVLVKGANYLEALARVGIVVFDKTGTLTKGTFEVTAVHPDKIDERQLLHLAAHVERYSNHPIALSLRNAYPDEADGCKVDDVQEMPGLGVHAMVNGETVNVGNEKLMASLGIEVCHCDKCKSGAGTVIHVAIGNRYAGHIVISDRVKDDAALAVARLKQAGVKKTVMLTGDYEQVGAAVARQLGLDEYHAQLMPADKVAQVERLLASKTGHDTLAMVGDGINDAPVLARADLGIAMGAMGSDAAIEAADVVLMDDKPSKIAVGIQVAKRTLRIARENVVFSIGVKAVILLLAALGMAGMALAVFGDVGVLVLAVLNATRALHTGGHAMPAARRRRRG
>NZ_CP045696.1|WP_154327564.1|1565151_1566345_-|serine-hydrolase
MYYLNNLVRRILFVIFAMTLLASCTIVRGYMTDGAYGPTSFSYEKRLKDTIVNRSEVFTFEHASQQAGWIDTLHFFNQGKMYSNTTMWEAIGPKTETQGVLIIQKDSIVYEKCTGDITSDKIASVFSVSKSITSLLCGIAVDEGYIKSIDDPVTDYLPELRKANPMWQKLTIRHLLNMQSGLDFDDTYSLSLKLKDIKRLHAMAKLNYGRNIMGQVKKLKFRCEPGTEYRYESMTTEILGIIIERATRRKFADYLEEKVWSPLGMESQAYITYDSKNHHTAHAFGGLALTMLDLAKIGRLYLNKGKWNGKRIVSESWIEQSTLYSRDNEGYHFCWYNTSCIGAEKPEYPGYYALGIRGQVLYVNPYKQLIMVRLGLKDDTYAHIPYLFEQLSNLWPK
>NZ_CP045696.1|WP_154327565.1|1566462_1567485_+|hypothetical-protein
MIDTSQLTSLVSAFRVETEKESISPETVGKLLQDNLDLLATASSDTERKILDDWKALTVVYDAAHATGMADMEHMFLTLKGRSLRNGASFTSSVPLYGATDLKAGIMTAAHVQAIMALQSSLPQVRLAVTALQTTVQQHGWQLSAIQAAAYVVTDIKQGVGNATKIFLSLTKHDVRTGEDFPNLGTCQIAAATANQAGAMTAAHVTSLANAKTDITALQSAMRKVQGAGCVVNGAMVYHLDTNRVGIMLMGYDLATGDREVEMHDFYIPAASQGSAGVMTATHVKQLDALRQAVFGGSGSGTTAQKAYFPLAIEINKLTLNYRSPGQVPGFLLLVNPKRL
>NZ_CP045696.1|WP_154327566.1|1567863_1570827_-|hypothetical-protein
MNRRIIILALMVVMLAMWPQGSAAKPIAKDKDKPCMVIGQVKDYLTHVLIDGAKVTLLTRDGVPVDSGRSSKNQTSSNLTTVYWVTAKTCDMPEMLLRVEAEGYEPAVVTLPAKKVHGRGSKGVRYVEDVLLKRQPKTIKLNDVVVKATKVKFYHKGDTLVFNADAFQLSQGSMLDGLIRQMPGVELKDDGRIYVNGKYVESLLLNGEDFFSKDRKIMLDNLPAYMVKNVKVYEKSSVLGERLHKKLGDETYVMDVHLKKEYNVGWIANVEAGGGTHDRYLARLFALCFSDHSRVSVFGNLNNLNDDRRPGESTTWTPEKMPAGKLTQRQAGLDYLIKQKDSKYKLSGNATVTHNDEHTLTRQNTLNYLTGHDSWTRYQQQQARHTFSVKSENEWKWTPAKRTTLLMQPSLSWQRTRNRQAMVSATFNENPEDYVGSATALIDTIGRQPAGNLLRRIAANRLLYSQLEKVDKLAVDNDIDFSQDLAEDMMTTFDFSAGLHYRSTKTKAFSHYLLDYPTLPTAATDYRNRYAHSQPNYSLSYNFGTYLMYWFNDIMYIQPTYKIELEHQHHDYALYRLDQLAGYDAGSDTPLGTLPSMQAYESTIDLQNSFWRSQNRATNTFAVDWSISRWHGDNKDIWVYVSLPLELNNYNMDYRQAAYDGSLHRRAWFFNPTFILRKMWDSQNKAIEFRYYLTHEVPDLVRFIPVRTDADPLNVTLGNPDLRNPCTHFFLLKYDGYSSKKPDLIFSVWTRFYLYKNALSMAYTYNRNTGARVFKPYSVDGNSAFQAGVDFGTPVTRNKLLSLDTKTRFGATRSVDLMTVVSTDDYDFTTMPARSIVHNTWASEDLKLEYKFPWMRLGLNGYVLFNRASSGREGFETQRVWDFHYGPTLKATLPWQVELATDLSIYSRRGYDDSSANTNDVVWNARLSKSFTKLGLTFLVDGFDMLHQLSNRSVTMNAQGRTEVWRNVLPNYVLFHVIYKFSKKPKK
>NZ_CP045696.1|WP_154327567.1|1571135_1571720_+|TIGR00730-family-Rossman-fold-protein
METRGKICIFGASSSRIERTYTDAAYELGRLMAQHGWSCINGAGSEGLMRAVSDGVLDAGGTVTGVIPKFMVDNGWNYDRLTHTILTANMHERKQRMAHMADAFIALPGGCGTIEELMEVFTWRQLGLIAKPIALLNTIGFWTPLIDMVERCIKQGFMKASHEQLWHVAETPQQVLEELEREIETGIVPAESKY
>NZ_CP045696.1|WP_154327568.1|1571757_1572663_+|DUF4271-domain-containing-protein
MPIYHSTHSPATPQAAPRDSAAALRDSSLRDSTLLHWKPRYPQGLPPRQASHVPAGKQLSQLPVMEVPAGRTPGSYNSSPLHDTVSMALLLLGVLLITLSYNKGYMYIANFAHNMFSTRKRENLFDDHTVSDLGILSALIFNTCVTMGLIAFYAIGYLVPGMQAALSHNVSMLVIMLVAWSLLFYLAQLALYYVLGFTFGDKLGTTIWTSGFKASQSLLGLLLLPVAIILMVYPNTIKVMLITALSLYICARIVFICKGFRIFFNNLQSSVYFILYLCAVEIVPPVLYCAGAITLCNFLQS
>NZ_CP045696.1|WP_154327569.1|1572678_1573428_+|uroporphyrinogen-III-synthase
MKIKKILVSQPKPSSEKSPYFDLESKYGVEIVFRPFIKVEGLSSKEFRQQKISIGDYTAVIFTARTAVDNYFRLAKELRYDVPDTMKYFCISETVAHYLQKYTVYRKRKIFYSENGHADGLMPLIEKHKKEVFLYPVSDVHESKLPELETKDINFRRAVMYRTVSNDFGPDEPFDYNMLIFFTPSGVKSLLSNFPDFEQGDIAIGGMGNKTIEEIKASGLRLDVTTTPSTPSMAAAIGKYLESESKAKK

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Crispr_ID: NZ_CP045696_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_5

1639026-1639135

Orphan

Consensus_repeat	Method
GGCGGCATTGCCGGCCGCGTGTATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045696_5

>merge|NZ_CP045696|5|1639026-1639135|CRISPRCasFinder
GGCGGCATTGCCGGCCGCGTGTATGGTACCGTCGACAGCTGCGAGAGCCACATCACCGTGTCGACGACCAAGGACGATGGCTTCGGCGGCATTGCCGGCCGCGTGATGGG

>NZ_CP045696|5|5|1639026-1639135|CRISPRCasFinder
GGCGGCATTGCCGGCCGCGTGTATGG	TACCGTCGACAGCTGCGAGAGCCACATCACCGTGTCGACGACCAAGGACGATGGCTTC
GGCGGCATTGCCGGCCGCGTGATGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154327606.1\|1629701_1630232_+\|TrmH-family-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349970
NZ_CP045696.1\|WP_154327608.1\|1633291_1634542_+\|DUF4105-domain-containing-protein	unknown	unknown	gnl\|CDD\|379156
NZ_CP045696.1\|WP_154327616.1\|1646136_1646682_+\|DUF177-domain-containing-protein	unknown	unknown	gnl\|CDD\|376863
NZ_CP045696.1\|WP_154327604.1\|1627623_1628595_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238572
NZ_CP045696.1\|WP_154328998.1\|1626983_1627595_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|240145
NZ_CP045696.1\|WP_154327611.1\|1642339_1643071_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327602.1\|1624711_1625302_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|237823
NZ_CP045696.1\|WP_154327615.1\|1645089_1646058_+\|transporter	unknown	unknown	gnl\|CDD\|223462
NZ_CP045696.1\|WP_154327617.1\|1646700_1646886_+\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|237038
NZ_CP045696.1\|WP_154327618.1\|1647110_1648094_+\|beta-ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_CP045696.1\|WP_154327612.1\|1643114_1643447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327600.1\|1620745_1621219_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP045696.1\|WP_154327605.1\|1628653_1629649_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327613.1\|1643856_1644345_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP045696.1\|WP_154327601.1\|1621807_1624588_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|178177
NZ_CP045696.1\|WP_154327614.1\|1644376_1645012_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327603.1\|1625437_1626751_+\|cell-filamentation-protein-Fic	unknown	unknown	gnl\|CDD\|225718
NZ_CP045696.1\|WP_154327607.1\|1630508_1633166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327619.1\|1648290_1649175_+\|GTPase-Era	unknown	unknown	gnl\|CDD\|234624
NZ_CP045696.1\|WP_154327610.1\|1641530_1642331_+\|KilA-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|367917

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154327606.1\|1629701_1630232_+\|TrmH-family-RNA-methyltransferase	gnl\|CDD\|349970	cd18097, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.60185e-66
NZ_CP045696.1\|WP_154327608.1\|1633291_1634542_+\|DUF4105-domain-containing-protein	gnl\|CDD\|379156	pfam13387, DUF4105, Domain of unknown function (DUF4105). This is a family of uncharacterized bacterial proteins. There is a highly conserved histidine residue and a well-conserved NCT motif.	3.05379e-12
NZ_CP045696.1\|WP_154327616.1\|1646136_1646682_+\|DUF177-domain-containing-protein	gnl\|CDD\|376863	pfam02620, DUF177, Uncharacterized ACR, COG1399. This family is nearly universally conserved in bacteria and plants except the Chlorophyceae algae. Thus far, mutantional analysis in bacteria have not established a function. In contrast, mutants have embryo lethal phenotypes in maize and Arabidopsis. In maize, the mutant embryos arrest at an early transition stage.It has been suggested that family members specifically affect 23S rRNA accumulation in plastids as well as bacteria.	2.13483e-20
NZ_CP045696.1\|WP_154327604.1\|1627623_1628595_+\|hypothetical-protein	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	2.92024e-23
NZ_CP045696.1\|WP_154328998.1\|1626983_1627595_+\|SIS-domain-containing-protein	gnl\|CDD\|240145	cd05014, SIS_Kpsf, KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.	7.49822e-59
NZ_CP045696.1\|WP_154327618.1\|1647110_1648094_+\|beta-ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	5.94726e-162
NZ_CP045696.1\|WP_154327602.1\|1624711_1625302_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|237823	PRK14823, PRK14823, putative deoxyribonucleoside-triphosphatase; Provisional.	7.07039e-99
NZ_CP045696.1\|WP_154327615.1\|1645089_1646058_+\|transporter	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	1.99447e-06
NZ_CP045696.1\|WP_154327617.1\|1646700_1646886_+\|50S-ribosomal-protein-L32	gnl\|CDD\|237038	PRK12286, rpmF, 50S ribosomal protein L32; Reviewed.	4.31727e-23
NZ_CP045696.1\|WP_154327600.1\|1620745_1621219_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	9.34253e-29
NZ_CP045696.1\|WP_154327613.1\|1643856_1644345_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.58886e-27
NZ_CP045696.1\|WP_154327601.1\|1621807_1624588_+\|leucine--tRNA-ligase	gnl\|CDD\|178177	PLN02563, PLN02563, aminoacyl-tRNA ligase.	0
NZ_CP045696.1\|WP_154327603.1\|1625437_1626751_+\|cell-filamentation-protein-Fic	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.33424e-40
NZ_CP045696.1\|WP_154327619.1\|1648290_1649175_+\|GTPase-Era	gnl\|CDD\|234624	PRK00089, era, GTPase Era; Reviewed.	2.04765e-145
NZ_CP045696.1\|WP_154327610.1\|1641530_1642331_+\|KilA-N-domain-containing-protein	gnl\|CDD\|367917	pfam04383, KilA-N, KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	7.14089e-17

>NZ_CP045696.1|WP_154327608.1|1633291_1634542_+|DUF4105-domain-containing-protein
MGRIDRNRLWAMWMLLLLVAAVPALAQRRDYKPIAVTWTHGLPVKPDSSNFVTASYVVASPGEKIYSRLGHATLRLECPSYKLDYCFTFETDVEPGDYLRFFAGQARGRIVAVPTGLFLAPYAREGRQVRQYELNLSLAEKRELWRMLDNDMVSDERRKFNFVTNNCTSISFSMVEDCLQGEHIDYVWPRVMSQDNGNGVRYLMRHSPWLSFISITLLGTESDKYWDNHSRVAPELVIDIERHSRIVAPDGRWRPVLTGEQRELLPLRHRLSAPSKASPGVVAACLLLVVLLATVLEWKPGWRRPAQVADAVLLGLQTAAGLLLLYMSTVASLFGTHWNWYIIPFNPVPLVVWLVCRRRRHYGRVYGFYTAVLVLFMLATPLSSQLDWQHQLVVAALAVRTASHAVAYRRRQGAHK
>NZ_CP045696.1|WP_154327607.1|1630508_1633166_+|hypothetical-protein
MLKKIFCLLCCIVAFVLPSWAGGTDYYYKVTATAQPTGVGKVYVSKSNTEPKSTDYEDTKILITSENSTQKAASREFYLFAKPAEGYVFDKWTKDDGTTEVSRQKSTSTGTLTSSSTEKSNPAEYGYIAHFSKAGDVYVVSEDETMGTAGIDNPKNTVGDAVTLTAYPDMFSGIFKAWTKDGKVVSTQNPYTFTVDEASKGKYVATFTKKDMEKKGFYCYVHNVKFKRSLGLMGISDKNVSTSNRYLTNSIMLLEDGSDIMRSSPAFVLKLTGSSDGYGGLENANLEAQGKGSKDIANNKTYTFSKHGDHLYIYGSAGSATAYMVDYADAFTQEEHLGKVNHPGLYNGANENDASYHWVVTPISEDSKDFCFGAMPSPKTKDEAGKYYTTMYTKFPYRCLDGVKAYVVSSVDETAHKVVLSEIKSGEVPSGTPVVLECTSTKPVENRLLPLVEEPAAIAETNRLKGVIWLKDENKTEDKYRTKFDSQTMLVLSNDELAFKNVNNTDVLAGGTGQTGTLTYIANNTCYLTVDSKMTEATTFTIEKGSSVVTKETTLAGLSQEAADGVTPYKLTGDDLECVGAIASDSYNYLVVKDGGYSTQATSNKQSYREYLIRSSYNGGKENTTRQTAYDQSNWILVDLSGIAGAQVDNYRNCKITSITGTYHKENPRFVATQIVLGDKTAPYAPNHYIATNFMTTYCADGTGNGVKDAAGNTYYFMNPKDGEWAIVAWAVWDKATQAFYVPAKDDEGTNAHGFAGGFKVDLRYNEGDITNVERLDEQSDKGQNVYTFPALIVKNTATSASAPRRAAIKPDTRELSTTYTVYPLSLSAGSVVTGVSTVDQAKTVRSVVYYNLQGMASPTPHAGLNVVVTRYTDGSTQVAKVMRP
>NZ_CP045696.1|WP_154327606.1|1629701_1630232_+|TrmH-family-RNA-methyltransferase
MKKKSMLDLHRITAAQFKQAPKMPVVVVLDDVRSEMNVGSVFRTADAFVVERIALCGITAVPPMPEIHKTALGAECSVEWQHYATALEAVQQLRSEGYTICTIEQVHGSVSLERYNMERGRKYAIVLGNEVKGVSQQVVDASDCCIELPQRGTKHSLNIANTAAIVMWQFFEHLML
>NZ_CP045696.1|WP_154327605.1|1628653_1629649_+|hypothetical-protein
MKKLLIEESFPTLKTDLTALTAQVGKTGELPPLQDLDTATAIDLRLWHVKYLMQHERQHDAAMAIDAMVFDDSIAGFPLLHHAWLWLARMSLFIDSNDYMLALGSAENALNVLVDVTAKRSEDFLAIVASLLYNLAYVHYMTDDNARAVKELTKCQKLFERLVKRNNARFSPMLVYAVEASTTIFKSRIKQMNVFAHYQTTTELYTAMLADKDSQKVRMALANLVDSLRHEGDLMLQMGNARNAVKFYTKALRYQKKISPVMGHKELTLSIGLAKALLRLVNRRAAAEQLLNSLLPLAQRLQAGDEILEIEQLLNNRNKNSNIMSMLKGMS
>NZ_CP045696.1|WP_154327604.1|1627623_1628595_+|hypothetical-protein
MRKIIAIGESVLDTVFKGNTPVKAMVGGRIANAAATLGMLQLPVTMCSECGTDSVGDIIVDFLQRHQVSTQSVDRFTDGATALAAIFKGENGHDDKIVNYGRYPVDRFDVVWPRIDENDIVLFGSLYAIDSPQREHLFELVQYARERKALIVYLPGFQHGINFRITRVMTAILENLEISDIVIAHERDINNIFPGESAAEAYRNHIEFYCPTYLHINPDLSVTMFAGKQRREYAAATPATSNLLGWQAGFTAGIIYELMCRGLRRDQLLELEPQVAAAVLASAQDFAAQCASAPDNCLPPGYAASRVAAYASRADEREKNMAK
>NZ_CP045696.1|WP_154328998.1|1626983_1627595_+|SIS-domain-containing-protein
MKQKMREILDAESRAIAQIPVTDGYAQAVEMIVQSHNRGGKLVTSGMGKCGQIAENIATTFCSTGIPAVFLHPSEAQHGDLGILQPNDVMLLLSNSGKTNEIVALVTLAKNLYPQLPIIVITGNKGSELAQHSDVCLHTGGAPEVCPLGLTPTTSTTMMTVMGDVLVVNTMLATGFTREEYAKRHHGGYLGVKSRQGCAAGSK
>NZ_CP045696.1|WP_154327603.1|1625437_1626751_+|cell-filamentation-protein-Fic
MEKAPKVSNGEVLRAMIKQASLPEAVRLLVQDINDHYEYWDKVKYKPLPQGFTHDDLWRLVVADRKRSDIMVWKKYHIHFALTSAMQLQCHKFDMNFGGSWESSALIPSSHRERYLESSLMEEAISSSQMEGAATTRKVAKEMLRKRTAPKDKSQQMIVNNYQTIQFIVAHKNEPLTQEMLLRVHRLMTYKTLEHEEDAGRFRNNNEVVVENAITHDVVHTPPAFEDLPQFVVELCKFFNDEQPTPFIHPIIKGIIIHFMLAYMHPFVDGNGRTSRALFYWYMLKQGYWLTEYLSISRIIYRSKRLYEKAFLYTETDNMDIGYFVSYNLRVLELAFQDLQSYLQRKIEERKVASTYLNIPNVNERQAEMIKIYADNPKDMYTVKDFQSRFMVTPTTIKSDLDYLVDIGMIKPVPLNKVKRGYVKGDKFDEVVSKLKK
>NZ_CP045696.1|WP_154327602.1|1624711_1625302_+|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MREIVFATNNEHKLQELREIVGHKFNILSLAQIGCHDDIPETASTIEGNAEMKARYVKQHYGYDCFSDDTGLEIDALGGEPGVYSARYAGPGHDSEANIDKVLAKLQGVPPERRTARFRTAVALLQGQQLHIFEGKVEGHILTERHGTGGFGYDSIFAPVEGRGLTFAQMQPQEKNAISHRGRAVARLVQFLASQE
>NZ_CP045696.1|WP_154327601.1|1621807_1624588_+|leucine--tRNA-ligase
MDYNFHAIEQKWQQYWRDHHTYQVDIDESKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIFARYKRLQGYNVLHPMGYDAYGLPAEQYAIQTGQHPEVTTVKNINRYREQLDKIGFSFDWSREVRTCDPKYYKWTQWAFLKMFKSYYNTALDKARPIEELVAHFEQHGSQGCNAATSAAGDDAQFTAEQWQAFSKVKKEEVLMNYRIAYRGKTMVNWCPQLGTVLANDEVSEGVSLRGGYPVVQKVMNQWCLRVSAYAGRLLRDLDTLDWSDSIKETQRNWIGYSEGAEMKFKVAGSDVEMTIFTTRADTIFGVTFMVLAPESEYVDLVTTPGQRQAVDSYIDEVKHKTERERLIDKKVSGVFSGSYAVNPVTGGNIPIYISDYVLAGYGTGAIMAVPAHDSRDYAFARKFNLPIIPLIEGADVSKESFDAKEGIMINSSNERLQLNGLQVKEAIAKTKQYIAQAGIGHVKVNYRLRDAIFSRQRYWGEPFPIYYDEDGQPQPLDESELPLQLPEVDKFLPTEDGEPPLGRAKHWVASNGRPLELNTMPGFAGSSAYYLRYMDPHNDQALVGKQADEYWRQVDLYVGGTEHATGHLIYSRFWNKFLYDYGYVCEPEPFKKLFNQGMIQGRSNFVYRIKDTNTFVSYNLKDQYDVTPIHVDVNIVSNDVLDLDKFKAWRPEFADAQFILENGRYLCGWAIEKMSKSMFNVVNPDDIVDRYGADTLRLYEMFLGPVEASKPWDTNGIDGVNRFLKKLWNLVFDGDKLRLTSEKPSAQALKSLHKLIKKVTTDIEVLSYNTSVAAFMICINELYTMKCRSKAIYDDLVVVLSPFAPHMGEELWHVLGHEGSVCDARWPKWNEEYLKESQVKYTVLFNGKPRYNIEVPTGTGKDEVQRIALANPGAEKWVAGKTPKKVIVVPGKIVNVVI
>NZ_CP045696.1|WP_154327600.1|1620745_1621219_+|acyl-CoA-thioesterase
MVMQEKVNNKNNKNRIVVNTPFLCTTPVQIRYTDYDMQGHINNSIYFNFFDTAKMDYFKKVRGNNMHWEDVTVVIANMNIDFYSPTRYFENVAVETQTIRLGDKSLTLVHRLVNTDDHQVKCVCSTVMVYLDPKTQQPATIPQYWRQAIRDYEGHDL
>NZ_CP045696.1|WP_154327610.1|1641530_1642331_+|KilA-N-domain-containing-protein
MAKIKVENTEISVVSVQNEDYISLTDMAHSQMQEHIIFRWMSLKSTIEYLGEWEMLYNPNFNCTEFDTIKNAAGSNNFVLSVKAWIQRTGAIGIMAKAGRYGGTYAHRDIAYHFGMWISPRFQLLLVKEYQRLKADEQKQLSWSAKRELSKINYRIHTDAIKENLIPNEVTREQAAMKYADEADVLNIAMFGMTARQWREQNPDKKGNIRDYANINELICLSNMENLNAVFINDGMAQSERLIKLNQIAIQQMKILEDTGGRNLLK
>NZ_CP045696.1|WP_154327611.1|1642339_1643071_+|hypothetical-protein
MRQQKYTQAQQVIDTLRTTGGYATLSDLYHLVDTKSWATKTPNESIRRIVQQSNEIFKIQPGLWALEECREEVMRKFDICPKEEKSIEQFTHGYYQGLIIEIGNMKHYATYVPAQDQNRKFLEKPLKDICTTIHIPDFSYENLTERARTVDVIWFNERKMPNSFFEVEHSTDIQNSITKFCDLQDFNSRFLIVAPQNRKEQFDKVMSRTAFKEVKERVAFHSYESIYKQYELMCIARASEGFI
>NZ_CP045696.1|WP_154327612.1|1643114_1643447_+|hypothetical-protein
MSEYIFYTTAGFTQAPNGNNVENCQVLGRAFGKNIKEARCNLIKENPWIEEVGFDMEDLLVMQLLTEEQKADIKAVIDYLWEDEHKHFQEEHYPKNHIYRILKRLKSSYK
>NZ_CP045696.1|WP_154327613.1|1643856_1644345_+|sigma-70-family-RNA-polymerase-sigma-factor
MEKKEKLEAQFHELVKAHKSTIYSVCYMFSSDPDEVNDLFQDSLINIWKGLGSYAGQSSLKTWLWRITLNTCISAGRKKKLKKVPLDMNVNLFEDRDAQSRQVKLLHDRIQRLQPFDRAIVLLWLENISYEEIGQIVGISTKNVSIRLFRIREQLKNMKEDE
>NZ_CP045696.1|WP_154327614.1|1644376_1645012_+|hypothetical-protein
MKNEENINADSSNMQELDQMRQQMALLKHSLDRQLVVSDKLMRQSMKGKLQWIKQMVWFEIIATPLLILFFVIEAMQLELSMGPEVMLAVILAVSVTADYIINVKRAPDFMAGTLVATQEQLLSMKRLRMWSFAINLPLSLIWAAWFIIDMYMRLPVGHVIDTAHSAALTGGIVGGSIGLVAGLVAAVVILRKMQKTNDSIIDQIKDLGGD
>NZ_CP045696.1|WP_154327615.1|1645089_1646058_+|transporter
MKKVIEFLKNWTLPCSIVSGAAIYYIFAMVPALDGVGRAMSPVFDQALPWFLFVILFVTFCKIDYSKMRPARWHLYTSLAQVVMVVVVVFSIIYFDLRGPHRVLMECVLTCIIGPCAAASAVVTAKLGGSLESMTTYTFMSNVLTAVMIPIAFPLLEHGASLPFWHMLWLILLKVCAVLVVPMGLAYGVRRWLPRLSGAIAGVPDLGFYLWGCSLSIVSGITMRNIMHAHTTATFLVATAVVSFVLCVIQFSVGRNIGRYMGASTEAGQGLGQKNTGFAIWVASAYLTPLATVGPGCYILWQNLVNSLELWQHRRMEKKHHD
>NZ_CP045696.1|WP_154327616.1|1646136_1646682_+|DUF177-domain-containing-protein
MASYKLPLKRLSLGVQEFTYHLGKDFFNDIEPLEVRGGNVDAVVSVDRKSDDIYQIEMTLKGEITIPCDRCLDDMQWAVDTSYDLSVKEGDEYDDSVDNVLTIPSHWRELDLAPLLRDTVLLTIPIKHVHPEGGCNAQMLERLSQHMAADEPLRSGREDTGSYNLGDDPRWEALRKLKDNN
>NZ_CP045696.1|WP_154327617.1|1646700_1646886_+|50S-ribosomal-protein-L32
MAHPKRRQSKTRTAKRRTHDVAVAPTIAQCPNCGAWHVYHTVCPECGYYRGKKVTGEEAAV
>NZ_CP045696.1|WP_154327618.1|1647110_1648094_+|beta-ketoacyl-ACP-synthase-III
MLNAKISGIASYLPDDVLTNDDLAQMVDTNDEWITTRVGIKERRVLKKDVGSSYMGIKAVKKLLEETGTNPDDVDLLICATSNPDYRFPSTASVILHHCDMEKKCYGYDIQAACAGFIVATYDAAAYIKSGLYKKVIVVCAEKMTSMVNYKDRSTCPLFGDGAAAVLMEPTEEPVGFQDGVFHVDGSGLEHLLYRAGGSAHPTSHATIDADENCLYQEGRPVYRHAVIDMLTSSQEIMKRNNLTCDDIQWFVPHQANLRIIEAVGGRLGISDDKVLVNIQHVGNTSAASIPICLDEYKSRLKKGDKIVLTAFGAGFTWGASYLIWAI
>NZ_CP045696.1|WP_154327619.1|1648290_1649175_+|GTPase-Era
MHRAGFVNIVGNPNVGKSTLSNLLVGERLSIITNKSQTTRHRIMGIVNGDDYQIVFSDTPGVLKPKFKLQESMLEYSKGALVDADILLYVTDVVEDATKNMDFLAKVAKEKIPILLVINKIDLLTGGQQQLEAIVDKWRQLLPQAEIFPTSAKVNFNVDQLMRRIVELLPENPPYFGKDALTDRSSRFFVTEIVREKILLDYDKEVPYATQVIVEQFQESETEIHIMAVIYVERESQKGIIIGHGGSKLKRVGTEARKDIEKFFGKHVYLQLYVKVEKDWRNQESKLKAFGYIE

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Crispr_ID: NZ_CP045696_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_6

2030801-2030971

Orphan

Consensus_repeat	Method
CACCATGCCCGACGCTGTGACCACGCTGGGCGA	PILER-CR

2 spacers

DEDDh

The CRISPR arrays of NZ_CP045696_6

>merge|NZ_CP045696|6|2030801-2030971|PILER-CR
CACCATTCCCGATGCCGTGACCATGCTGGGCGATGGCTGCTTCCAGGGCTGCACAGGGCTTGCAAGCGTGAGCCTGGGCAAGGCTGTGACCACGCTGGGCGAGTTTTGCTTCAATGGCTGCACGAGCCTCGAGAGCATCACGCTGCCCGACGCTGTGACCACGCTGGGCGA

>NZ_CP045696|6|4|2030801-2030971|PILER-CR
CACCATTCCCGATGCCGTGACCATGCTGGGCGA	TGGCTGCTTCCAGGGCTGCACAGGGCTTGCAAGCGTGAGCCTGGGCAAG
GCTGTGACCACGCTGGGCGAGTTTTGCTTCAAT	GGCTGCACGAGCCTCGAGAGCATCACGCTGCCCGAC
GCTGTGACCACGCTGGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154327871.1\|2034003_2037414_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|200584
NZ_CP045696.1\|WP_154327868.1\|2029191_2029422_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP045696.1\|WP_154327864.1\|2023172_2025029_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|379837
NZ_CP045696.1\|WP_154327877.1\|2045280_2046144_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368225
NZ_CP045696.1\|WP_154327863.1\|2022552_2023149_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327869.1\|2029619_2030249_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154329020.1\|2031206_2033498_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|372685
NZ_CP045696.1\|WP_154327873.1\|2039737_2040766_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327867.1\|2028662_2029217_+\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238493
NZ_CP045696.1\|WP_154327879.1\|2047234_2048683_+\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240532
NZ_CP045696.1\|WP_154327862.1\|2020874_2022515_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379837
NZ_CP045696.1\|WP_154327866.1\|2026522_2028118_-\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NZ_CP045696.1\|WP_154327860.1\|2017921_2018509_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|366353
NZ_CP045696.1\|WP_154327861.1\|2018702_2020850_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273429
NZ_CP045696.1\|WP_154327876.1\|2044298_2045261_+\|ornithine-cyclodeaminase	unknown	unknown	gnl\|CDD\|225280
NZ_CP045696.1\|WP_154327874.1\|2040833_2041781_+\|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|235695
NZ_CP045696.1\|WP_154327865.1\|2025167_2026487_-\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP045696.1\|WP_154327878.1\|2046322_2047114_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368225
NZ_CP045696.1\|WP_154327872.1\|2037543_2039760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154327875.1\|2041811_2042309_-\|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154327871.1\|2034003_2037414_-\|glycosyltransferase	gnl\|CDD\|200584	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins. This family includes many uncharacterized bacterial proteins containing an N-terminal GH18 (glycosyl hydrolase, family 18) domain, a middle NodB-like homology domain, and a C-terminal GT2-like (glycosyl transferase group 2) domain. Although their biological function is unknown, members in this family contain a middle NodB homology domain that is similar to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily. The presence of three domains suggests that members of this family may be multifunctional.	9.42024e-85
NZ_CP045696.1\|WP_154327868.1\|2029191_2029422_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	1.43532e-26
NZ_CP045696.1\|WP_154327864.1\|2023172_2025029_-\|metallophosphoesterase	gnl\|CDD\|379837	pfam16370, MetallophosC, C terminal of Calcineurin-like phosphoesterase. This is the C-terminal of Calcineurin-like phosphoesterases. It is around 150 residues in length from various Bacteroides species. The function of this family is unknown.	4.63477e-30
NZ_CP045696.1\|WP_154327877.1\|2045280_2046144_-\|hypothetical-protein	gnl\|CDD\|368225	pfam04991, LicD, LicD family. The LICD family of proteins show high sequence similarity and are involved in phosphorylcholine metabolism. There is evidence to show that LicD2 mutants have a reduced ability to take up choline, have decreased ability to adhere to host cells and are less virulent. These proteins are part of the nucleotidyltransferase superfamily.	4.04116e-48
NZ_CP045696.1\|WP_154329020.1\|2031206_2033498_-\|TonB-dependent-receptor	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	2.13979e-12
NZ_CP045696.1\|WP_154327875.1\|2041811_2042309_-\|hypothetical-protein	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	2.7997e-76
NZ_CP045696.1\|WP_154327867.1\|2028662_2029217_+\|isochorismatase-family-protein	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	6.82203e-29
NZ_CP045696.1\|WP_154327862.1\|2020874_2022515_-\|hypothetical-protein	gnl\|CDD\|379837	pfam16370, MetallophosC, C terminal of Calcineurin-like phosphoesterase. This is the C-terminal of Calcineurin-like phosphoesterases. It is around 150 residues in length from various Bacteroides species. The function of this family is unknown.	3.95356e-29
NZ_CP045696.1\|WP_154327866.1\|2026522_2028118_-\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	1.035e-18
NZ_CP045696.1\|WP_154327860.1\|2017921_2018509_+\|CHAP-domain-containing-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.726e-31
NZ_CP045696.1\|WP_154327861.1\|2018702_2020850_+\|AAA-family-ATPase	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	9.87355e-175
NZ_CP045696.1\|WP_154327876.1\|2044298_2045261_+\|ornithine-cyclodeaminase	gnl\|CDD\|225280	COG2423, COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism].	7.15331e-30
NZ_CP045696.1\|WP_154327874.1\|2040833_2041781_+\|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	3.81998e-72
NZ_CP045696.1\|WP_154327865.1\|2025167_2026487_-\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	2.23447e-138
NZ_CP045696.1\|WP_154327878.1\|2046322_2047114_-\|hypothetical-protein	gnl\|CDD\|368225	pfam04991, LicD, LicD family. The LICD family of proteins show high sequence similarity and are involved in phosphorylcholine metabolism. There is evidence to show that LicD2 mutants have a reduced ability to take up choline, have decreased ability to adhere to host cells and are less virulent. These proteins are part of the nucleotidyltransferase superfamily.	4.31324e-41
NZ_CP045696.1\|WP_154327879.1\|2047234_2048683_+\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	7.88453e-103

>NZ_CP045696.1|WP_154327869.1|2029619_2030249_+|hypothetical-protein
MKKNRSVIITKQGAPVALLLVVALVAAYGLLSCSHGGDARGGDAHPSDSLAEALGNQIFTDYYNYYDASSVAKHGDDFNDNVDDSYADGHDTPVPADDDQDPDGTTAVPHDKIRGNASEAESLISLFNGMDTDDMTGVIDQLNAANKAIGSNKTYASYATEIKWYLGLAYLKAGKLDKARSMFKEVASAGSDIYSSQAQEIVDKLDKAA
>NZ_CP045696.1|WP_154327868.1|2029191_2029422_-|PspC-domain-containing-protein
MYNNSNRLYRSSTDKVLAGVCGGLGDYFNIDPTIIRIIYVLLTVFSAAFPGVVAYIIMALIMPQEPPTFNGPQGSY
>NZ_CP045696.1|WP_154327867.1|2028662_2029217_+|isochorismatase-family-protein
MEEKKLLLIVDPQVDFITGTLPVPGAEQAMNDLARYIIDHDGDYHAKVVTGDWHPLDHCSFEPNGGQWPVHCVQHSPGAATWWPLLEALYSTRGATEFLTKGDDKSREEYSIMQNPDSGAFLTWLLAGKSKYTQVHVCGLAGDVCVLNTLRDLMPLCGSRIKVLEQYAPSLDGGKALSSFLAGR
>NZ_CP045696.1|WP_154327866.1|2026522_2028118_-|DUF4435-domain-containing-protein
MDIQLPHKSNGQEADVLRNARQITIIGANGSGKTRFCNWVLQQYPDRAYRISALRALFATSLKPKLKGSIDDIYDKINEMSTLDKGVAATEFDRLVYIMMVDEFRDLMNYKAHLLMQEHTEFPKTKLDTVVKMWQQVFPKNKVLRENGKLLFSTEGQEDRYTSLRLSDGEKTVLYYIGAVLYAMPGAVVLVDDPEVFIHQSMMSTLWNAIEEMRPDCTFVYNTHDIDFATSRIDNQCVWVKSFDPAASTWDYVVMPSSAKLDDGLYYDLLGSRKPVLFVEGDDTHSIDGRLYPLIFPEYTVKPLGSCNKVIESVRSFNDLKSFHHLDSRGIVDRDRRDDKEVEYLRQKKILVPNVAEIENILMLEGVIRAVARYQHKNENDVFFSVKKTVVKMFGDQLKSQALMHVRHRVKHYVEIRVDARFRNIGALEDHLLDLVNEINPRGMYENICRQFHTYLDNHDYAMILRVFNQKMMLGESNVASLCGLKSKDDYIKTVLTILKQNGREAEAIRAAIKQCFGLSPDGEVLDTAQQ
>NZ_CP045696.1|WP_154327865.1|2025167_2026487_-|alpha-L-fucosidase
MRKTLFALTAALTLTTTAWAQTATGGSYAPSEAIKQAQQEFQDSKFGIFIHWGIYSMLGDGEWVMNNKKLNYEEYTHLAGGFCPSKFDARAWVRAFKDAGARYVTFTSRHHDGFSMFKTATSPYNVVDGTPFKRDVVAELAQACHSEGLGLHLYYSHLDWHRTDYPLGRTGRKLGRPTQGQDYDSYLKFMKQQLTELLTGYGKIDCIWFDGWWDHDSDASPFDWRLPEQYALIHKLQPGCLVANNHHQSPFAGEDIQIFERDVPGENKAGLSGQAVSLLPLETCQTMNESWGYDIADSNYKSADELIQLLASTAGRNANLLLNIGPRPDGELPQESLDRLKAIGQWLRVNGESIYGTRGGMVSPRHWGVTTQRGDTLYVHILDWADTALPLPIGNRKVKSATLLAGGAAVKTSAIPGGVVVLLPQVPTGPDTVVKLVLK
>NZ_CP045696.1|WP_154327864.1|2023172_2025029_-|metallophosphoesterase
MANKILNRWLPMLALACMSLQAAAFNVSGHITCEGAGVAGVAVSDGVVVTTTDASGYYSFTSDKKNGYVFYTVPRGYEPAYANGFNPQFWQQFKSTNTATAETHDFALTRSDNDKYIMIFGADSHLAKRNGDRTMYNNGWIAALKREKNAAKQSGTKIYSTILGDLTWDLYWYANKYNLVDFMADQATYGYPIPLFPVMGNHDNDGAVKPLTDNTDLLASKPWRTFVCPNYYSFNLGRVHYIVLDDIFYTNSGTASGTGMAGGRGYLDQVTDEELSWLVKDLQLVTDKSTPIIVMFHIPQFRLNSSFATYGAGRNYAALAACFNDFKTVHFMSGHTHYNYTAHPSYRNITEHNIAAICATWWWTGRLQNTNYAYNYCQDGSPAGYSYWTVDGDSLQWKYKSIASNGDAQMRIYDMNAVKNFMATEATAKALVKAYPGTVPTFGTYSDNAVLTNVFAYDTDWRVEVHEGVQYTLAANRLAAYDPLHVLAYDYYRYKSAGSITTTFATSTNYHMFLSQAHTSYLPITVKVTDSFGQVYYKTIQRPQSYVVTMDASQAPYDLGDVNGDGVVNVTDVTALINKILGNSPTGFNSIVADLNGDGAINVSDVTLLINKILGTAQ
>NZ_CP045696.1|WP_154327863.1|2022552_2023149_-|hypothetical-protein
MKSLVIIATAAAMLLATGCREKSAGNTAGGQAIEGSFAGGAIHFGDSRQQVTRGLYSKGFTDAAGLDEAHFDTIGADAAGQPVLVKVLVPADTAGYDYLGMKWNNLQVQCDDKGLYSVTMHSRYGAKAAVDRQYAQLLEALKHKGYAMQKTVIGQSTVVGESTDIVGYRYQHGNRIVQIHNNDEDNGLSSISLIFNQQ
>NZ_CP045696.1|WP_154327862.1|2020874_2022515_-|hypothetical-protein
MNATTSRLCLLLAAALAALASQAHNITGRVTCGGHGIAGVAVSDGITVTTTDAGGYYSMTSGKMNGYVFVTVPRGYEPACRDGFDPQFWQLLNHPDSTVAEVHDFALNRVDNDNYTLIVGADTHLARRLGDRKAYKRGFIARLKQEKKQAQARGERIYSILLGDLTWDAFWYSNNYNLASFMADQRDMGYPMPLFPVIGNHDNDGAVPQGEGTDLLASKPWRTIVCPNYYSFDLGRVHYVVLDDIYYKNDDLPGRRRTGIAGARNYEALVTDYQLKWLRQDLALVDKSTPVIVCQHIPAWHFDHNRQPVATIKNIDALAACFKGFKRVHVLTGHTHVNRNVHPAAFKTDTTSMWEHNIAAVCATWWWTGQLSGREMCTDGSPAGYSKWTIAGDSLQWQYASIQDESNPQCSLWDMNQVNRFMHSDSDVLAMKALSAKVPNWDNWEPNTVLVNVYACDDDWSIEATEDGRPLPVTPVRSAAPGHFLAYALPYFKKHHKVPGDNMGLPTFHIFKVQAATPDHEVSITVRDSFGRVYRRTLARPAAFKL
>NZ_CP045696.1|WP_154327861.1|2018702_2020850_+|AAA-family-ATPase
MYTQPLFNDLNERQLEAVKTTEGRLRIVAGAGSGKTRVIAHRYAYLVNVLGIDPAGILCMTFTNKAAQEMKSRIATLVHRGNVNDYVCTIHGFCVRFLRQEIFRLGWPANFQIIDEQDAKVLAKHVMQELGLDRTKATVRKFLAAIGLAKGQQRQHYVGRYMLPGSKDVEGSDEFSRYLKVQLKHFVLDYDDLVYFTLYIFDHFETVRRHWQQEINYVQVDEVQDCDRDEWDVINAVSGGYNNLCIVGDPDQAIYEWRGARPSLFVNFKSDRDIFLTENYRSTPNILDVANSIIAHNRDRLPKELFTRCPAGALVLYHHFKGETQESEWIVRQIKKNVAGGEAQNSDFAILYRASYLSRSIEQELIKQKVKYVVWGGIRFFERREIKDALAYLSLVARNDDLSFMRVVNLPSRKFGPASMQHLARLALDEDRPLYDTLAAHRGEATFGHCKLDGFVRAIEQARQAMASGKSIGDIFELLMRTTGLKDLLRKDEDEDRLENLDELAASIAYYEDEHRNDELPVTIERYLQDIALYTNADYRKDGTAVRLMTIHQAKGLEFPCVIVVGMTEGIFPSHRALRERKRAAEEEERRLMYVAVTRAQRVLVLTESEGYDNAVQGEKYPSRFIGEIDERLLTVKGNPDPQLFAASRALAARLADDLEMATRADEAGIHLGDVVAHPVFGQGVVVEQRPGGSLVVKFAVGNRMLMPAVLTKCE
>NZ_CP045696.1|WP_154327860.1|2017921_2018509_+|CHAP-domain-containing-protein
MKPRPMLKNCYMKNIQSILGRCLLVTLMIVTCATGAQAQRLNRHKKSHRGTVAEQIAKASIKNNPAEQVRELLAYAFTFKGTPYVYGAMSPSGFDCSGFTSYVFKKFGIRLNRSSRGQVNDGRRVSREDIKPGDLVFFNGRAGRGGVGHVGIVTESYGDGTFRFIHAACSRGVSESKSTEAYYRSRYVGACRVIE
>NZ_CP045696.1|WP_154329020.1|2031206_2033498_-|TonB-dependent-receptor
MKHFVFALAMLQALCLCAQTTGVVVDENKQPLPAATVSLYRMGEEKTMTGVMTDSLGQFELGTQKGQDYVITISFMGYTPQHIECRNVPGKFELGTIAMEPESQTLSGVTVTASSVIRKADRQIVIPSQLQRKTSSNGVALLQHLQLSRISVNTLNGSVTTTTGDAVELRINGVKAEIQDVKALQPADVLKVEYHDNPGLRYGNVSAVIDIILKEKTAGGNVSGELMNTINPLGIGDYQLSSNYHAGKSSVKASVNWNRRDLNWYRENTESFNATSPAIENQEIGQKTKAKYDNVNLSVGYDYTNGGNQLSVTFRDLYNKTPNSVSDRNSLLEQEGTTYTVTDRTRTNSNSPSLDVYYQREFAKDKHLYLDLTGTYINSASHRLYRQADGTDTQKITSDVDGDKYSAIAEAIYEQNVKDSRFSFGLRHQQSHTRNIYTGTDSSTVKMNNNETYAFGEWYSKLGRFDYTLGLGVMRTHLSQGGAKQDKYILRPTIQLGYRFGNHVRVRYKGYIGGYAPSLSDLSDVEQQIDIYQLRRGNPNLHTVTFYSNEFSLSVDTKWFSAEWFTRYSYDDKPFMEQTTYEDGMYIRSYANQKGFHRLNSQVSIQAQPWAEHLMIQVTPYVNRYISKGNDYTHTHTNWGVRGNLMAMYNNWYMGANVETSFHNLWGETINKDEASHSLVAGYNRERWGVELQFQNIFSSHYEMSVENRSRLAPYRQLMWSKNLCRVFGIDVHFNLDFGKHRSQAEQRIKNSDTDAGIMSGAK
>NZ_CP045696.1|WP_154327871.1|2034003_2037414_-|glycosyltransferase
MDKQVFQTDSRSRWNKFKLTIGTLVVLIVVLTATFITMLFFDRAPGFPFHDSFKSALLAEKPLMKKNQLSEQYKGYRKFFDTEKAHNGYVQWKRQHIKKYNRYAGQKGSAVYKNIDSWQAMPAGLRAGFYVNWDPQSYASLKQGISKMNLVLPEWIFLNPSTLKAETRIDGKGLSLMRKAGVPVMPMLTNAWNGEFNARGISRVLHSRKLTQALINQLVTLCKKHNFVGINLDLEELAESDNSHLTAFVSQLGDALHSNGLYLTQDIMAYNEDYDVRELAKYTDYLFLMAYDEHNTLSAPGDISSQDFIERSVDDIARKIPNEKIVLCMAAYGYDWTAQGDNNQSLSYHDAISRAADSGDHIVYDQDSYGLSYAYYDDRQVEHKVYFNDAATNFNTMRFGCDYGLAGFAVWRLGTEDDRLWTFYSRNLVKSQAARLPVGTLEHLHGSHQANYIGEGEILNLIGTPRDGRCHIDMDNTDILIAAEDYIVLPTSYELQKFGSCGSKDLLLTFDDGPDARWTPQVLDILNKRHLHAAFFMVGINVEKNLPIVRKVYNSGNMIGNHTFDHPNIAQCTRRHTAMELRLTRLLIESITGHSTLLFRAPYNADSDPSGRDELLPLVEARKENYLDVGESIDPEDWEPGVTADQIYHRVIKGVENGNGHIILLHDAGGTTRKETLKALPRIIDTLQARGYRFITIPQYLHQSKQVLMPEIDKGKEYYAMQANLTLASAVYYMSDFINALFIIFLVLGIGRLVFMLALVVKEHRRNLALPSQLPAQPPLVSIIVPAYNEQVNVVNTLHNLLKQDYPNYDIILVDDGSTDDTFKEVTRAFAGHERMQLLTKPNGGKASALNYGIAHTQAQYVVCIDADTQLYHNAVSLLMRHFFADKQGRVGAVAGNVKVGNKVNMLTQWQAIEYTTSQNFDRQAYAAINAITVVPGAIGAFRRQAIIDAGGLTTDTLAEDCDLTMRILKAGYVIGNENHAIAMTEAPEKLRQFMKQRTRWCFGIMQTFWKHRGEMFKRRYKGLGLWALPNMLLFQFIIPTFSPIADLLMILGLFTGNIGKVLLYYCIFLVVDASISIMAYLYEHERLWGLLWIIPQRLCYRWIMYVVLFGSYLKAIKGELQQWGVLKRTGTVKNI
>NZ_CP045696.1|WP_154327872.1|2037543_2039760_-|hypothetical-protein
MKRFITLSLLIVTAVLGTMACINLGRPNYYMFSLFNRMQMGRTFDTRLQQYWEKYTGTRLREYQVSALASADLDDAAHSDNPIVKKLSDDAEMMRYARLLQQYLQGCRALSNDSWNYPSKEQIKGARLTMEQVGQQAQAYGGTRLKPQYALLYVRTLVALDKWAQVGSYWESTASKLPKSVFKDMMRNTYAGSLLRQGRKQEACRIYAELGDMQSIKWCMRHQRNLAGIKQEYAADPNSPTLVYLVQDFVNNAQETKDHNNDPESMKYIEATSIYNNEIRQFIDFAVKVVQSKQSKVPCMWQSAAGLLSYMTGNGLQAEQMLDQAMTMQGTQRMCDNARACRLLVHVGNARQYSPQFGSWVKQELQWLMAQAENEEGTPADNHYAEVLERVTFSALAPKYRQWGRPGAAMSLLALPNKFENALWQRCAYNPYADDGDVEFHSDYSQALDSLTAQQAIDYLAYTESRPGDELERWLLEYNGTSLDKTKMTDMIGTKYMREGQWAKAVPYLEQVPLSYISKQAISRYMARRDYRVERWFKRQVVDREDDYEDWSTPTVVSHNQKLDFCHNVVALERQLRAASGAEQQARLHYELATLLYQASYKGDCWYLTRYGQSFYDTMCYTGEADLIQQSIAHLRAAKSEGSLAMQEKCLYALAFIPQGADLFDTYYDSRYVAHKRLNRASPRYVEMANLSNFYNMHHARVSPYVAHCDVLKQFRQLNTPGKPHKKNGTSPRRRRRG
>NZ_CP045696.1|WP_154327873.1|2039737_2040766_-|hypothetical-protein
MNKNLAALIISITAALMLSACTHRRQAVPEPRRAVYYWRTVFRLDTAEREFLTRNHVEKIYMRYFDVVAGKQGQPAPNATIRFGQAVPRGIEVVPTVFVMNDCLSQDTAQLARRIVERVVQMNATNDIAGVKELQIDCDWTRSTQQVYFAFLRQVNRALQARGMRLSVTIRLHQLAMTPPPCDYGVLMMYNTGDLTRAGDRNPILDPRDVEPYLRHIAAYKLPLCAAYPIFSINLLFAGTTYKNMLYDADLGDTLVFRRVAPQRYVVISSRDMPSSLTDDDTHVDVGDSVIVRQVPAAVILAIHDELERRRPGINDQVIVYDLESSNINHYQQHDYEKIYHP
>NZ_CP045696.1|WP_154327874.1|2040833_2041781_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase
MSNFAQNFATLMKQFKIWLEAVRLRTLPVSLSGVLIALGLAKWNHAFRLAPALLCLAFALLAQVVSNFANEYYDYKSGADKKGRAGFRRGVTEGDIKPAVMRRVMFSLLGLTCLVGLCMLAWVDPGYNYNNWLMLLAVGVLVAVFALAYSAGPYPLSYHALGEVAVFLFYGLVPVIFTYYVVTGTFGPFAVMAGIAIGFMGVNVLLVNNYRDVDDDREAGKRTSVVVFGRQAARLAYLANGFLALGVLAVLWLRIYYTMPLWALLAPVVYINMHFYTWMRLRRSEGAQLNGLLGATARNMLVFTLLLIIPLVVLS
>NZ_CP045696.1|WP_154327875.1|2041811_2042309_-|hypothetical-protein
MDDFAAIDFETANGQPSSVCSVGVVVVRGGVIVDECYSLICPEPDYYSWYNTRVHGLTKRDTAQAPAFPEVWAGIAPRIAGLTLVAHNKAFDERCLKAVFRTYGMDYPDYPFACTLAAARRKWKRGTVPNHSLDTIAQLCGFELKRHHNALADAEACAAIAMKIM
>NZ_CP045696.1|WP_154327876.1|2044298_2045261_+|ornithine-cyclodeaminase
MKHNVVKVIQHELIAQAGITPKQCIEWVRESFMMKYEAQLPAKISLRPQGDDFFNTMPCILPKRYNRYGVKVVHRIKGQTPLLGSDILLYDSSNGRLLALLNGDWITTMRTGAVAALAIKTLKAKGVTTYSFVGLGNTARATAMCLLADNADCEVKFRLLRYKDQAEAFVDRFKTVPNAHFEIVDDIKELVAGAQVIVSCVTSANDLFCDDDALFRPGVLLVPVHTRGFQNCDLFFDKIYGDDTAHLHGFKYFARFKYFNELSRVLLGTDSGRDNDDQRIISYNIGLSLHDIVFAHHIYEALGQQAPSMQQVIEDKKFWV
>NZ_CP045696.1|WP_154327877.1|2045280_2046144_-|hypothetical-protein
MLMNHSVFWRQKPGTRHCCSSQIPASIMKKITDIKELRSIQLNILCEIHKFCTAHDITYFLSSGTLLGAVRHKGYIPWDDDLDIYMPRASYERFLQQYHDDGRYRIYAPDRMKKYFYTFAKLVDTSTRLVEEETQGFTIGVYVDIFPLDYIDDDPAVQQHIFDKKKLLYKIRRCKIAKSNPLRSKLGYCCYKMLPVTVTHLEKMIYRLIATSSPTHTVCNLTEAGPLTIKGCFPAADVERQVEIEFEGRKFMTMAGYDDYLTHTYGDYMKLPPVEQRVTHRFEAYWL
>NZ_CP045696.1|WP_154327878.1|2046322_2047114_-|hypothetical-protein
MKEIATIAELRSIQLAVLDHITTYCDKHGIVYFLACGSLIGAIRHKGYIPWDDDIDLFMPRESYNRLLAAYRDPDPRYALLAPGRATRYLYTYAKVVDRRTLVVEDEVPGYELGVYVDIFPLDYVTDCRWLRRHVVWKYKKFIYRMRRCKMQPNFLASRWRYLLYRYFPLPLRAIDSLIGHTLTGHKPTGTVCNMTEANALERECFPAHCIEGERVEVDFEGKRYKTMPGYDEYLHHLYGDYMQLPPVEQRVHHHFAAYWRDA
>NZ_CP045696.1|WP_154327879.1|2047234_2048683_+|oligosaccharide-flippase-family-protein
MAETLKEKTAKGLFWGVLNNGTMQVLNVVFGIFLARLLSPGDYGLVGMLAIFTAIAGNIQSAGFTNGLINLKHPTAGDYNAVFWFNITASLVMYALLFAAAPLIAAYYRQPALVGLSRFTFLAFVMGAFGIAHNGYMMKNMMNKEVAVCNLLGILVSGTAGIVMALKGLAYWSLAWQQVLYIAVVNAGRYYYTFKLWHPSLHVDFTPIKQMFSFSVKILITTIINSLSNNVLTFIFGRIFSLRTVGSFSQAYKWDTMAYTFVQGTLGQIAQPVMVAVEGEKDREQRVMRKMMRFTAMLSMPVMLGLATVSHEFIIIALGAKWAQSAAIMQILCLGGAFVPFYTVYQNLVISHGRSDIYMWCNVVQLALQVGIILSCYRLGILWLCAIYSVFNIAWLLVWHYYARRLSGVRYRDVLADVLPFFLITASVMAVTYVVTLPLYHLALLLAARVVLGAGLYLGTLKVLRVKIFEEALDFLTKRMKK

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Crispr_ID: NZ_CP045696_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_7

2230558-2230683

Orphan

Consensus_repeat	Method
GGTCACGTCGGTCACGTTCACCCGGCCGTCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045696_7

>merge|NZ_CP045696|7|2230558-2230683|CRISPRCasFinder
GGTCACGTCGGTCACGTTCACCCGGCCGTCGGCATTGAGGTCGGCGGCGGCGGCTGCCGGTGCGGTGTTGCCCAGTATCATGTTGATGAGGGTGGTCACGTCGGTCATGTTCACCCGGCCGTCGGC

>NZ_CP045696|7|6|2230558-2230683|CRISPRCasFinder
GGTCACGTCGGTCACGTTCACCCGGCCGTCGGC	ATTGAGGTCGGCGGCGGCGGCTGCCGGTGCGGTGTTGCCCAGTATCATGTTGATGAGGGT
GGTCACGTCGGTCATGTTCACCCGGCCGTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154328055.1\|2229236_2230442_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378342
NZ_CP045696.1\|WP_154328062.1\|2242604_2244512_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP045696.1\|WP_154328058.1\|2235543_2236923_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271215
NZ_CP045696.1\|WP_154328059.1\|2237027_2239616_-\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_CP045696.1\|WP_154328047.1\|2212916_2214185_+\|DUF3440-domain-containing-protein	unknown	unknown	gnl\|CDD\|226478
NZ_CP045696.1\|WP_154328053.1\|2221578_2226363_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328051.1\|2217471_2217918_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP045696.1\|WP_154328052.1\|2219472_2221422_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328060.1\|2239758_2241489_-\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214510
NZ_CP045696.1\|WP_154328049.1\|2214672_2215302_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP045696.1\|WP_154328054.1\|2227995_2228895_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328050.1\|2215516_2216704_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271177
NZ_CP045696.1\|WP_154328057.1\|2232990_2235423_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378342
NZ_CP045696.1\|WP_154328063.1\|2244536_2247623_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP045696.1\|WP_154328066.1\|2250080_2251364_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|376389
NZ_CP045696.1\|WP_154328064.1\|2247864_2249007_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|235471
NZ_CP045696.1\|WP_154326857.1\|2226757_2227705_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP045696.1\|WP_154328061.1\|2241509_2242553_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328048.1\|2214181_2214676_+\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|319255
NZ_CP045696.1\|WP_154328065.1\|2248993_2250040_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|273467

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154328055.1\|2229236_2230442_+\|hypothetical-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	4.25895e-25
NZ_CP045696.1\|WP_154328062.1\|2242604_2244512_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	8.94376e-13
NZ_CP045696.1\|WP_154328059.1\|2237027_2239616_-\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	2.70114e-55
NZ_CP045696.1\|WP_154328047.1\|2212916_2214185_+\|DUF3440-domain-containing-protein	gnl\|CDD\|226478	COG3969, COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only].	2.73875e-152
NZ_CP045696.1\|WP_154328057.1\|2232990_2235423_-\|hypothetical-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	3.60181e-16
NZ_CP045696.1\|WP_154328051.1\|2217471_2217918_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	7.25994e-24
NZ_CP045696.1\|WP_154328060.1\|2239758_2241489_-\|PKD-domain-containing-protein	gnl\|CDD\|214510	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins. Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.	3.1806e-10
NZ_CP045696.1\|WP_154328049.1\|2214672_2215302_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.05336e-15
NZ_CP045696.1\|WP_154328064.1\|2247864_2249007_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|235471	PRK05446, PRK05446, bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB.	0
NZ_CP045696.1\|WP_154328050.1\|2215516_2216704_-\|hypothetical-protein	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.57219e-08
NZ_CP045696.1\|WP_154328048.1\|2214181_2214676_+\|chromosome-partitioning-protein-ParB	gnl\|CDD\|319255	cd16397, IbrB_like, immunoglobulin-binding regulator IbrB activates eib genes. IbrB (along with IbrA) activates immunoglobulin-binding eib genes in Escherichia coli. IbrB is related to the ParB N-terminal domain family, which includes DNA-binding proteins involved in chromosomal/plasmid segregation and transcriptional regulation, consistent with a possible mechanism for IbrB in DNA binding-related regulation of eib expression. The ParB like family is a diverse domain superfamily with structural and sequence similarity to ParB of bacterial chromosomes/plasmid parABS partitioning system and Sulfiredoxin (Srx), which is a reactivator of oxidatively inactivated 2-cys peroxiredoxins. Other families includes proteins related to StrR, a putative regulator in the biosynthetic gene cluster and a family containing a Pyrococcus furiosus nuclease and putative transcriptional regulators SbnI (Staphylococcus aureus siderophore biosynthetic gene cluster ) and EdeB (Brevibacillus brevis antimicrobial peptide edeine biosynthetic cluster). Nuclease activity has also been reported in arabidopsis Srx.	2.37753e-54
NZ_CP045696.1\|WP_154328063.1\|2244536_2247623_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP045696.1\|WP_154328066.1\|2250080_2251364_-\|histidinol-dehydrogenase	gnl\|CDD\|376389	pfam00815, Histidinol_dh, Histidinol dehydrogenase.	0
NZ_CP045696.1\|WP_154326857.1\|2226757_2227705_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.80467e-69
NZ_CP045696.1\|WP_154328058.1\|2235543_2236923_-\|hypothetical-protein	gnl\|CDD\|271215	cd14256, Dockerin_I, Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.	1.41537e-11
NZ_CP045696.1\|WP_154328065.1\|2248993_2250040_-\|histidinol-phosphate-transaminase	gnl\|CDD\|273467	TIGR01141, Histidinol-phosphate_aminotransferase, histidinol-phosphate aminotransferase. Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme. [Amino acid biosynthesis, Histidine family].	4.31145e-120

>NZ_CP045696.1|WP_154328055.1|2229236_2230442_+|hypothetical-protein
MVKKYKFIAVWLLGLLAVATATARPKARQWTIDGRNCDVERVAGPRRVARGVTCDKYVLPAMPLQVSVLTIDLKTPGLSLETCLGADQIVGRETPTSMAQRKSKPGHRVVAAVNGDFFMTKPKELKGMPRSGQVCRDELVENPVGRACLVIDDNNRPYIDRVDWAGTIACGDSTFRLHTVNMIGLEKENTGGNQTFLFTGSYGPVTYDCSGGVKVQIGAVNGSFNWMPTCSQQCVVDTVYNGDGTTPIPAGKAILWLQGSDTTHARMLAKGTTFTLNFKTTLRSCPEQLVAIKELVGGSDHIIMRNGAFVDDWAARHPRTCAGYNVKGDRLFLVVIDGRSKASCGVTLKEAYGVLKALGVYNAVNLDGGGSSCMVVGGQVVNTPSDGNVRAVGNGLLVVEN
>NZ_CP045696.1|WP_154328054.1|2227995_2228895_-|hypothetical-protein
MLSENWDKLYNAVDANGKNVFSLNPWTGADANGVSYQPNFTDLSKSEYLPLLNGWSSRSSYLYSCRGFVRISKTKFGGDLLSPALTALGNDTADLELNYQGIGYTSNIKFDESGTYKSGGVHDYQAYYVVVLGDGEITSGATKMQDKILYADADGNATYYKGAQIEIPTDAFINPLDTMEAWSNANTKVTLKIKGATAKTQIAFVASEYKTLPKKTDPEIDPNAPHGTNDKVCRVVLDNIKVTVDRVVTAVDNVNAAKAVKHITYCNLQGQTSAEPFEGVNIVKTVYTDGSTHVAKIIK
>NZ_CP045696.1|WP_154326857.1|2226757_2227705_+|IS30-family-transposase
MYKQLTSEQRYTISVLLQTKFSLSFIAETIGVSVSTVSRERRRNSNAKGVYDARTAVLKVKRRKARTPGNRRIAPYVRSRVFELIRKEQWSPEEVAGWLGKKEGITVSKSTIYNWIAALSPHYGDNIRKHLRHGGRPRQKSLLTTKAHIPNRLSIDERPETDYGQTIGDWEMDTIVGKEGKGAIVTLVERRSCFMLMEKLDTGKQAVPLAYAVVRLIRESGLPVRSITTDNGPEFAAHEIIARELNTKVYFAHPYCSWEKGAIENMNGLIRQYIPKKTDFRGISRLYVKSIIEKLNNRPRKKNGFRKPKDMIKEK
>NZ_CP045696.1|WP_154328053.1|2221578_2226363_-|hypothetical-protein
MKRILSYMIVTLLLAMCGLGAHAQSPQTGVYRIQNVGSKLYVKVTGKYAAEPNESAQAEASKITVGVAGVLDDGTYKMNSLASTYTTADGQTQSVEVYDYVTRAIHIGNAVLRQEIASSSDENKAKAEQAMDKFITDNAHMRLYPVAGKASTYRAVATIPNLPDEVLDWMVKKGKIAEPTQTAAYAYLCSLVEQYLGKSQTDADLKAKVLRNLRKVALGKTYLLGADGYPSFDYVEADAHFAPIAGSGKADDYFQWKLIAKVSANALQDGTYQVRNLGNERYVEVLKKYYAKPDALEADASNIDLAFGQRSDDGSVKLTKLAAIEKEGNTYVDCYSYIDRAITLGKYAIAAVLNGDYEGVREASADNIAKAQAYLEKYLHENVYMSVKPVAGQDEAVYAFATIPTVPQEVADQMKAHGAIAEATPEAAWQFGVDYVKRYLDKSSTDSKLKQVVLNNIDKIKQGHTYYLTADNNGAENGFGYVDATEADLTSKSLMWGVIAQEVQPENLASGTYKIHNVGNNKYVKIRSKYYARPDATEAEASDVHLGFAGKLPDGSYKLNSLAGTDPATGKLVECYSYIDKALSLGKIAIATILKGDYTDSEGNTTRQASDENVKKAQDYLDKFMHDNIYMRVKPVAGANYVYALATIPVIPDEVVEAMYNHGSIKEKTADAAWNFLVDYVKQYLGSSQTDSDVKAYVLKAINSIKQGHTYYLSADNDGAQDGFGYVDAANYNSTDKSIEWGLDQVKADAAIESGFYKIQNVATRKWVDVKSKYYAAPDVDEAQATPVHVGIDSQLPDGGYKLNSLAGTDNNGNYIECYNYIAHAIELGKQVVLANLKSSSDENKQKATDYFENFIKTNAYMKIRLVPNQDSAFYAYATFPAIPADIKTIIVEHVNREAGSTVIANNDGVWQWLIDQVKVYLNKAGNATDSKLKSMVLNNIDKIKEGHTYYLRADVTTATGVNTFGIEDGNTADLSDTHLWWGMAKANPGKGVTGWFRIRNAKGTDSGKAYVNVTGNFTAEPDLTAEQAKSQAGTVIYVDMGDSADGVKFPIKALRSQGVNVNTYINATMALANQFVLPIVTEKLKEIVENNPNYSKYASLVEPAIKALVQSVDVNYYATPVFTATGNKAFEVSAKVPDVAEYCDMANMALKLMGKTKTQLVNKINSMKSGDGGIKDRVLEIAAQCANRIDNPDQLWDYMTSKVCDVVKNHPNVLPERINNLILNNLKNVKYGTTYCLTQEDKYATFDFQEASEAASNEAAKWVLEPFDPKAEGYSTTAYYPYLDVTPEQHYSSSTLDGATVDDSWNYTTGYYDFDAAVADPANGTTEAYKALSTERVTRNIGNGKTQVYYLVKLENAMQGNVIPVQTPVVLRTQKGNIQLVPQGTPASIDYNNPSADEPAGADVQSIDAYQQFLSMLIGKIMGGSGAPRKKVITTTSAADNLLAASFFGDAVPSKAAGAYLPLSVKTRVDDLQGDGTGNQYLNMQGLGFWKDAVSKMEPNKAYLDGNAQNTNWDAKVTFDNSNANVAPGYILELTSGGSTVVTHVDDVTVAKTVKSVRYYNVAGIETSEPQAGVNIVVTTYTDGTKTTTKVLK
>NZ_CP045696.1|WP_154328052.1|2219472_2221422_-|hypothetical-protein
MKKTLLLAAMTILGFGLAHADFSQGAGHFYMVQNKATKRYINLIHDKGSASALSQDFHAIRLENDGEQHTEPGTLIYISSGYNLSAQGTSVKDITGYSVNIKQNGTGDKNEAVYNAWVTAGFLFFKKDVYFQDEAGKGFDKAATGDADDCKWYIKPVDTGNGGDCYFGVSPKSTDFLDGYYYTTLRASFSYKLSQGVDAFTVVGGKLNELPHDNVVPANTPVILRCKSVNASDNRLYPQAIGGKYTAESTVTSSLVSGTQYSYFKTSVVNAKDGETGSYTNGTAYAFGTAKSNANANYRVLSVKDGQLGFFDTFASAYPDEKCINGELAYMDTKSDVVLIAKQEAVTTSLAGLVTKEADSKTLYHINDGELTAVAFGDDNVLYCKDNNAYASKDASQQGQVDYMKDRAKLQTGAYDQSNWVALSLDEATATKLMNSNVINHVISGVEGVLTDKVNPTVKLTVAPTVGQESTYTPNTYIAASFGGTQTGTQGKHEQFFFVTPKPCEVASITWAMWDGSKMVAPTHVDGKVNQAGLSGEFAYGGDQSKLKENSIYSFEGIVKVNTASSKAGKLSAPAASGYTVYPLTQPVEIGSIDGNVVTAVGSVNEAATVERVIYYNLQGQSSAEPYEGINIVKTVYTDGSTRVDKVVK
>NZ_CP045696.1|WP_154328051.1|2217471_2217918_-|IS200/IS605-family-transposase
MANTYVSNNVHIVFHTKTGGTTIAHDDEGSLYKYMAGIVNATGSHLIEIGGMPDHVHMLVSVTKTIALADLVRTIKAESSRWLKRYSPIYNQFAWQEGYGAFSVSVSLKSKVIQYIRNQEHHHEKRTFAEEFKVFLDAYGIEYDHRYL
>NZ_CP045696.1|WP_154328050.1|2215516_2216704_-|hypothetical-protein
MAILSLTVVPCKALKDGRHKVRIAVAHRSQTRYILTDVIINSTKEWKNGKIVKRDDATYLNTKLLQRMQEVQRIIDETPYTEGMTCAELVATILHTRGKKTHTLRSAFEEMLEVSTAKDTTKERYRTRFKSITSVIPETTFMSHLTPLMVQRFMKKRGAEIAPITLQTQVTLLSQIVKFCQMNGYTDFRIPPTQGCYHRVVAVRQNWLTPDQVRFIRDNKTNRRGYNKFRDLFMLSYYLGGINLIDLAHINFNVCADTLHYVRTKTERKTKVNPYVEFEIPSEAKPIIDKYKGEDGKLKMYKAADINQCHSMVSTVRSYRDDYGLPGLTFYSARKSFAQHAFALGESESVIDYVLGHSLGGGHNKMLYAYIKVTPEMATACVRKVCDFISSSRNL
>NZ_CP045696.1|WP_154328049.1|2214672_2215302_+|helix-turn-helix-domain-containing-protein
MKQYKVVIVFNDGDEINAKVAAWNQTDALQRIMSNKQATEFITSHDDVKNVDITCLGEYKDIPDDPQRFVLSPSQERDGWLVAADRKTNMVFIFMEGAFRESVEYKPLDDMTPLDAAAAMRELGDWLRLYHADMLGGNETASKINRMRVGALVAEARKKQGLTLRELAELSGVSYQNITKIENGKYNVSIDILNKLCATLGLKIDLSGY
>NZ_CP045696.1|WP_154328048.1|2214181_2214676_+|chromosome-partitioning-protein-ParB
MKSPVYNIKAIPIEDIQANSYNPNHVAPPEMKLLYESIKEDGYTMPIVVYPLGNGKYEIVDGYHRYTTMLLHRDIYEREGGKLPCSIIDKDKSNRMASTIRHNRARGSHSIELMMNIVSELKKAGMSDAWIMKEIGMDADELLRYKQLSGLAELFKDREFSESK
>NZ_CP045696.1|WP_154328047.1|2212916_2214185_+|DUF3440-domain-containing-protein
MNVYEALIKRLDFVFSEFDKVVVSFSGGKDSGVLLSITMDYAKRTGNLGRLAVYHMDYEAQYTKTTEYVDRVFNSLPDGVDGYRVCLPVKAQCSTSMFQAYWQPWKLSDKAIWCRPMPTKHVINEDNFPWDFDYEISDYEFNIEFGKAVYPNKKVCFLIGIRTQESLNRWRTMNRRMAVNEYKGRNYTTVITDKLVNAYPLFDWAVEDVWTANARFGYDYNKVYDLMYLAGVPLSKMRVASPFNDCAQDALKLYKVLEPDTWGLLVGRVNGVNFTGLYGGTTAMGWKKITKPAHFTWKQYMYFLLDTLPEETRKNYLYKLGVSIKFWRERGGCLSDETIKELRDAGVNIEVSDHTNYKTSKKPVRMDYLDDIDIKEFKEIPTYKRMCICIIKNDHLCKYMGFSLTKDEMKRRKAIQEKYRDL
>NZ_CP045696.1|WP_154328057.1|2232990_2235423_-|hypothetical-protein
MTSTTHPTMKIISTLLLAAIAATSATASSTWNVIGTDYKVDTLFYNQVGPGTTQTSLKFTSAAGNQLRVFYATMDMTNPYLSLHGVVATDMLAGNERISAMAQRKSQPGRRYFVGVNADFFMTSGTASNGSSKVGSPVGSTVVDGVVYRARNNATNYKQVIVDPQGQIYINPFHFGGTITGPDGTTAQLGGINTYANEGAAGNANMVVIYNDRYWGSTNAKGTCNEVTAVAIDTFKTAGAFKMVVTCEPSSAGDMKIPDGAYVIHGDGTSASLIGSLHTGDTVTVNPSWTFNGMAVTPYNVISGNPKILADGVTLNSEADRGDANTQQPRAAVGYSDGGKKVYFFVVDGRSTISSGVRTTALADIMRYAGVTDAVNEDGGGSAILYTSTLGIRNVPSDGTERADGNGFYCVSSAPDDSVVSQIRYIDFSLQAPHYGIYAPKFYGYNKYGMLIDRDLKGVTLSCDPKLGTILGDTTFYANGSATSGNLVAHYGDVTCTMPIAITGNIDGISIALDSVVNDTYHPYTVEVQSTVGNHTMAINPAALSWTSSDERVVTVGHDTGVLQGVADGTAWVIGKVGDVVDSLKVIVEKPLAHVMAIDPNPDVTTWKFTQSGGKNATQQANGDGITYSYTGASSRAPKIVLTKALRLWSLPDTVRLRINPGEASFKNVVFGLRANGQNVAYHTVTPDSVTAGKEMVLDVPTSAWTDAANMANFPVTLNSIQLNMNASTTGKQYTIEFLGFETVYSAVPAAPAAKGDLNADGQVNMTDVTTLINMILGNTAPVAAADLNADSRLNVTDVTALIAIILGTE
>NZ_CP045696.1|WP_154328058.1|2235543_2236923_-|hypothetical-protein
MKHLLLLSALGLLTCASAFATTDNQTYEPVNGIKAVNVWTIDRVHNPETYASMPFVNTYARTATLYNDVVYVSRSDAQSVIIGTDTIPQSVIYRLDAKTGNLLSSLPLTLDGKPYGGLLSANSIGFDNFGHMWVMPYCSGAATATEAHLYSCDPNTGALTLVATLPLGDVVSRIDYFDVIGDITRVNAPCNIKAPGSQVTTIYSWTCAKGSNTWEGGFEGDTYMDITEFFPATAAQWGYAPMIKQILGEDEDTKYNGELFYIDGFNSTPAIYDMTGSKIDDFEKVDASLWPENGTNGVNEFTLDGRNFMVYSKAQYSGDGHGCQVNVVELGEGMSLSGMKKYWQLPADSLGKTSDGGTRIHSIAVQYGTEGGEPCVTLLTYKNYNGLAIYKIGKGVGGGTTTKGDINGDGTINVTDVTALVNKILGSGSYSDSVCDINGDGTVNVTDVTTLVNMILGNK
>NZ_CP045696.1|WP_154328059.1|2237027_2239616_-|family-10-glycosylhydrolase
MKTKITLLLLLALALLLPATAQVKREQRGVWMSAFVGDWPSTPITTANQKVLKATCQKMLDTLAANNMNTVYYHVRAMSDAMYNSAYEPWSSYVSGTRGVAPAFDPLAWIVQEGHKRGIEIYAWVNPYRYAPKSTKWGESPLDYINTHPDWLMTTDYETCLNPGIDSVRQRVVDVCRDIITKYDVDGLVFDDYFYNQDGSPMDLDSAQYNAYKRGGGTMSQADWRRENVNKMVHDVNAMIKQVKPWVRFGIGPAGVVCTSPEVAAKYGVDPSPGRDWQYDQIYSDPMAWITRGTVDFMSPQVYWNTAGNYDEVTTWWGRIGKKFNRHVYISQTCSSVGKTGWDFDEMCKQVDVARQAGCQGMIYFKYTTWRYNNHTIDGKVWGLREYLKKHSFTTRSLSPAVTWQKTPQSYGAVTGSKIDGDTLSWDSIPNVRYVVYATPDSVADSQFSCQPQYLLGITYSPRYVVKPAYRSGYRYAVTVLDRWEREYAPVLAGATASQAPKPQLTTPADGATVTLLSHLKWQGNGSIYKLNIYSNPGLDTLVAQVETSAASYPLASLTALQQGKTYYWQVTASGLNLTESTSDVHRFTIAPLSITSPASGATAVDLTPAIAWTAAGDSTVYTLIVSDNADLKAPVVAISTTHTSYTVPAFKLAGGTTYYAQVTAREGTDSVASSIMSFTTRDVALTAPLLVTPAVDSLTLYSNSRIAVEPQAGAQSLRIEMSTSTSFPPRSSYKATIAGSFESIPLGQINGVGKPVDGKRYYVRARYAYLTAATGTTVQYTPYSLVRTFTYRDCRQGDVNSDGVVNVSDVTTLINMILGTTATDATVADLNADGTINVSDVTTLINFILSGSDDDKILKNN
>NZ_CP045696.1|WP_154328060.1|2239758_2241489_-|PKD-domain-containing-protein
MKFFKTIGLLTLLMLITTGCVSKDPDYGNFGGKDVDFSYAVEGNEYALDFYVVSTIQFTNTSAKTGKVTWDFGDGTTSTEANPTHKYAKAGMYKVTLTVDGVGSRTYPLLIYDIAPSLSVTSQSAPTIVINDVKVNLGIELPNPENLECKYVWTFPEGTKTADGKTITTFTGYSHSDGTIDNPGALTFSNIGSQKVTLQTWFDVNGENRRLEDSYVNVQVGSSLPAPTLYYAAVGGNIKAYKLVDMSKLPAGTKNMPFDMGVSSGNMPTNLVFATEKTVTDSATIEQDNVYILDCGKQYYYINDENGTLGDGKITVMSADGSSANSMVTNVGGQAFNDPFQGCTDGTYLYYTDRNTGIRRLPLSTRNETEKTVYSSTDGYFVVNSQLAYYNKGIAYGAINTGLYIDKNNTFWWGKNYSGYGIYRFKTSDIGKTGAGVDIPYPIVLQNTQPRGFTIDEELGRLYVWMTKGTTPNPGFGDYNLPGATSTADYSKYNAFVQMDADPINTTDAEGVYVTQMVVDAATHYVYFGFNAASGEKTYKTGLKYYNPETKKVYDFQGNTDKILGVCINPRATYLF
>NZ_CP045696.1|WP_154328061.1|2241509_2242553_-|hypothetical-protein
MKIVNILGSIALSILVMTSCAVHDPIDDNGELGQVLPTVDWEQSSKFVKAGNYATFKGKYYTTSDKQIDHSEVWALVKREQSAAAKSMLTTSLAYTKTYTLTDTVRSAQSMAKYPHSLAVWDGHEYVLNDSFPTSRTLAPLTWVSPAQWDQDKFDSYYPSTFASEFVDYMVNALTKDSTYYNDLRNVYINYNFPIEAFTTLNAKYNVNFPTDTTSDKKSDDWYTTDQVDHYYYTTIVDSVTVYHEIASQSDAPAGVNVYPVYKASEWLFSRYSDDTGSKITTVRRQYMPYWKELISTIPFTSWIYNTSDKVYNVTYTRQYYLEPTFRVYDTDGKVGVSNDNQEITLN
>NZ_CP045696.1|WP_154328062.1|2242604_2244512_-|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKKINIIALLMLTCLGMVSCGDTLDDNINPDKAHAIDAKNGLPTVIYYAQQIVYDHAEYNAYFSQMLTTGGKSSIGTYSYKSEWEMLTMNRHPMWRRHFYDIGVNANNVIANAAAINSPNYELIARTIKLMSTQLTTDAFGDMPRSQAYTSNAPKYDSQEQVYAWMMQECDDLIKAFDDKSITENPNNQVIGASSDRVYQGDLSRWKGLVLAIKARLLLRNLPNIDRSAAMCQKIVDAADAAITQWRSGSLLYGSWFGNEPRYYWNGGTGTQNAVWSIAQPVINSWESRANLLSQAIPSKFFMVDLLGLSNPDNESLSGLFAWTGHQHDGYANDPRCNLLMVARTGPKTASDDAATIKMRYLENNIGMGSSFKIANYPYLYMGAYAGATTAYNPLFTMEELYFIKAEAEYWLGNKAEACALAKEATEHNIERHLEAFELYHPNPNYDSKTDNKYPGKTTVSGEPAFESKEYWDAQVNAFLNNEDYYRGSSKKPSVYKVTDRGNEHWFFNPSNYTLSDLMEQKYIAMYLQPEQWTDMRRYHYSNNRNKYGIGDNQEIIYPTLRRPYNLYAAYWIDGLTEAQKENTWIQRINYDPETEEKYNKKELERLGAYKNYKWLQKPMIWAEDYGKVTSLTGK
>NZ_CP045696.1|WP_154328063.1|2244536_2247623_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MRKQLLLLLFSIFAVMGFARTVTGVVTSATDKQAVIGASVRVHGTTRGVTTDIDGKFTIDASDNDVLDITFVGMKPISVKIGSQSSLNIVMTDNAQTLGEVVVTAMGQTQEKKKLNFAVQSLNADEVTAGGTSNFANSLQGKVAGLQVSTGGGSPNSSTQVIIRAISSINNGQNNEPLVIVDGVPVRGHGSSLGDINPDDIENMSVLKGAAASALYGQEAANGVIMITTKSGARDGSVKVNGNASVEFSTPMRVPQIQRVFTPGVRGMYKENSGSGGWGPYLQSDEQRYDNVGDFLGTGFLQKYDVSISGGTEKFNSYASVSYTNSDGIVPKDYKDQLTVFLKGMYKPSSQVTFNLSTNYVHSKSRGFGNAMSTIYNWGINHDMSDYQTKDGHVNWANYYDSWDELLDTQRIGAVVSPYFGRNRDNSKTQSDRIVINGQVSYEPIKDLVFTGKIGYDKGYSTYEGYTVPRLYDGDLVDPDNSDVKSILASNQSLYGSYSFDPSRSEQFTLQGLATYKKTIAQDFNINLLLGAEYKESTSYEASLYGEHFQLGGDYYSFMNTDFTNGDLLTSNHPKLSHTKYNKYGYFGELRFDYKGIAQLSMTGRYDGTSRLKQVDYNYFYPSVTAGVIFSELFHLTNSWFSYGKIRGNWAKVGKDCPAYQFTDTYKQWTLFPDGGYGVDPATSRAIALVPEMDSSWEIGADLRFFNSRTRLDIAYYSTTADNQIVSVRVSPASGTILQTRNEGTVKNHGMEISLAQDIIKTDDITWTANLNYSFNRGKVTKLPEGVVEIQGTQYGDIFPVARLNGSSTGISGKDYLRDPDGNVICDANGYPTINPAKGIYIGNREPDFLLGLGSSFRYKHATLSFLLDGRCGGDVANVTGRSLLSNGMAKIWEKYRNREYIVDGVQAVTLPDGTTGYVKNTTPIVLDQNYVNKYYSTVSSNFIEDGSYLRLSYVTLSYDFSSMLKKGWAVKNLSLSATGRNLFLLTKYTGNDPAVLVSTSGGTGGTGIDYYQVPVSRSFNFTLKATF
>NZ_CP045696.1|WP_154328064.1|2247864_2249007_-|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB
METNKKKALFIDRDGTIVVEPEADEQVDSYEKLQFLPGVITSLAFIARTLDYELVMVTNQDGLGTPAFPVESFTGPHELMLRTLEGEGVKFDDIIIDTTLEADHQPTRKPGIALLGKYTSGDYDLAGSYVIGDRLTDVELARNLGARAILLAPHVAQARQAVAQAGLDATLAVVAPHWQRVTDYLRGGQRTAHVQRYTKETRIDVWLDLDGTGQCQVSTGIGFFDHMLDQIGRHSGIDLKIKCKGDLYVDEHHTIEDTGIALGQAIYEALGDKRGIERYGFVLPMDDCHCTVALDFGGRSWLVWDARFSREMIGHMPTEMFFHFFKSLSDSARMNLYVSARGDNEHHKIECIFKGLARALKQAIRRDVFNYRLPTTKGAL
>NZ_CP045696.1|WP_154328065.1|2248993_2250040_-|histidinol-phosphate-transaminase
MTDFDINSLVRPCIQALEPYSCARNEFHGQASVWLDANESPYNAPFNRYPDPLQAQVKAKLAQVKGVEAGNIFLGNGSDECIDLVYRVFCEPKTDNVVAMSPSYGMYEVCAHINDVAYRKVPLRPDFSLDVQALLGAVTPHTKAIFLCSPNNPTGNAIDTLLIERILDQAGCLVVVDEAYADFSSQPSMRHKLARHPNLIVLSTFSKAWASAGVRLGMAFASRAIVELFNKVKYPYNVNCLTQQYALEHLKKLDQLAGWRNAILAERGRLIDALARLPQVLKTYPTDANFVLVKTVDADGIYAHLCREGIVVRNRNRVEQCLGCLRITVGTPQENDAVINAISNYGNK
>NZ_CP045696.1|WP_154328066.1|2250080_2251364_-|histidinol-dehydrogenase
MTVEITKYPDRSQWPALMRRAVAETRELHDTVASIMDQVREQGDKALRELALKYDGVQLGDLAVSPAEMQQACDQVSQELKAAIDQAAANIATFHKAQRMHELEVETSPGVTCCQRAVPITRVGLYIPGGNSPLFSTVLMLGLPARIAGCSQVVMCTPCGRDGKVNAAILYAARKCGISRIYKSGGAQAIAAMAWGTETIPRVSKIFGPGNRFVMEAKMQAQYNKVAIDMPAGPSEVMVVADGNADLRYVASDFLSQAEHGSDSQSTLLTTHEALASRLPQVIDELLATLPRQEMIKKSLGHSHIIVLHTLDEVIDYVNAYAPEHLILNCEECEALARRVVNAGSVFLGPYSPESAGDYASGTNHTLPTSGYAHAYSGVNLDSFTKKITFQRLTKQGLAGIGHTVETMAQAEDLMAHRLAVAVRLDK

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Crispr_ID: NZ_CP045696_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_8

2256559-2256665

Orphan

Consensus_repeat	Method
GATGGAGGTGACGGAGCCCGGGATGGTGACGCTCGTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045696_8

>merge|NZ_CP045696|8|2256559-2256665|CRISPRCasFinder
GATGGAGGTGACGGAGCCCGGGATGGTGACGCTCGTCAGGCCGGTGCAATTGGAGAACGCCCACACGCTGATGGAGGTGACAGAGCCCGGGATGGTGACGCTCGTCA

>NZ_CP045696|8|7|2256559-2256665|CRISPRCasFinder
GATGGAGGTGACGGAGCCCGGGATGGTGACGCTCGTCA	GGCCGGTGCAATTGGAGAACGCCCACACGCT
GATGGAGGTGACAGAGCCCGGGATGGTGACGCTCGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154328075.1\|2260484_2261642_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|334163
NZ_CP045696.1\|WP_154328074.1\|2258105_2260049_-\|transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP045696.1\|WP_154328068.1\|2252595_2253054_-\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP045696.1\|WP_154328073.1\|2256923_2257343_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328064.1\|2247864_2249007_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|235471
NZ_CP045696.1\|WP_154328067.1\|2251408_2252263_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234781
NZ_CP045696.1\|WP_154328062.1\|2242604_2244512_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP045696.1\|WP_154328078.1\|2264669_2264984_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328069.1\|2253420_2254449_+\|type-IX-secretion-system-protein-PorQ	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328076.1\|2261638_2263699_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328080.1\|2266838_2268566_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP045696.1\|WP_154328077.1\|2263695_2264178_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328063.1\|2244536_2247623_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP045696.1\|WP_154328071.1\|2255405_2255894_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328079.1\|2265055_2266834_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP045696.1\|WP_154328066.1\|2250080_2251364_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|376389
NZ_CP045696.1\|WP_154328070.1\|2254559_2255246_-\|MIP-family-channel-protein	unknown	unknown	gnl\|CDD\|235453
NZ_CP045696.1\|WP_154329024.1\|2264183_2264633_-\|DUF882-domain-containing-protein	unknown	unknown	gnl\|CDD\|311960
NZ_CP045696.1\|WP_154328081.1\|2268673_2269774_-\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|368753
NZ_CP045696.1\|WP_154328065.1\|2248993_2250040_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|273467

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154328068.1\|2252595_2253054_-\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	1.4715e-14
NZ_CP045696.1\|WP_154328064.1\|2247864_2249007_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|235471	PRK05446, PRK05446, bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB.	0
NZ_CP045696.1\|WP_154328075.1\|2260484_2261642_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	1.30146e-06
NZ_CP045696.1\|WP_154328067.1\|2251408_2252263_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	5.76336e-137
NZ_CP045696.1\|WP_154328062.1\|2242604_2244512_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	8.94376e-13
NZ_CP045696.1\|WP_154328081.1\|2268673_2269774_-\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	8.79903e-12
NZ_CP045696.1\|WP_154328074.1\|2258105_2260049_-\|transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	0.00139743
NZ_CP045696.1\|WP_154328080.1\|2266838_2268566_-\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	0.00387261
NZ_CP045696.1\|WP_154328063.1\|2244536_2247623_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP045696.1\|WP_154328079.1\|2265055_2266834_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	6.74875e-42
NZ_CP045696.1\|WP_154328066.1\|2250080_2251364_-\|histidinol-dehydrogenase	gnl\|CDD\|376389	pfam00815, Histidinol_dh, Histidinol dehydrogenase.	0
NZ_CP045696.1\|WP_154329024.1\|2264183_2264633_-\|DUF882-domain-containing-protein	gnl\|CDD\|311960	pfam08291, Peptidase_M15_3, Peptidase M15.	6.8968e-28
NZ_CP045696.1\|WP_154328070.1\|2254559_2255246_-\|MIP-family-channel-protein	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	1.20963e-68
NZ_CP045696.1\|WP_154328065.1\|2248993_2250040_-\|histidinol-phosphate-transaminase	gnl\|CDD\|273467	TIGR01141, Histidinol-phosphate_aminotransferase, histidinol-phosphate aminotransferase. Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme. [Amino acid biosynthesis, Histidine family].	4.31145e-120

>NZ_CP045696.1|WP_154328071.1|2255405_2255894_-|hypothetical-protein
MMQRVFITLTLVLVAVATAAAAGWGGNDPKPRDFMGCEMGVASASEAEITIGKEGVAHETDSTGNIVLIKPMYAGWQYDEGMMSFEGGRLARVQLYRHAGTLQEANDLARELAADLERRYGTQLQYDNGCYHAQAAGMSLRLALSEDNQDSWMVGLEAANLQ
>NZ_CP045696.1|WP_154328070.1|2254559_2255246_-|MIP-family-channel-protein
MKKYLAELVGTFVLTFLGCGAAVSLNCGVDSASVVGTALAFGLTVVAMAYTIGGISGCHINPAITLGVLCSGRMSVKDAVGYWVGQFIGGILAAAVLYAITTATSGSILGTTTGANACADGVPLGAGFLVEAVLTTLFVLVVLGATAKTNGATNNFAGLAIGLSLTLIHLVGIHYTGTSVNPARSLGPALFQGGAALSQLWIFIVAPLVGGALAAAIWKAIEPKAGKA
>NZ_CP045696.1|WP_154328069.1|2253420_2254449_+|type-IX-secretion-system-protein-PorQ
MRIYSRRTVALVIALAALVAARADSGTTAYDFLKVTPSSHVYGLGGHNITIIDDDINLVEQNPALLGPEFDHQVGLNYMKYIGSTNFMGARYGQGIDEHSAFAAGIQYYGYGNLDGYDETGTPTGTFSASDISFSLTYSHDIAANLRGGITLKYLYSKYDEYTAGAIAADLGINYYNPDNDLSLSAVVSNLGGQVKKFNDKKDNLPWDVQLGYSQLLGSSPFRLSITAWNLRKWHLPYYEPADKNNASSDLVKKDKFGSNLLRHLVFGLEFLPQDNMYIGLGYNYKVRTDMSTYNRNFLSGLSIGAGLKVKSFGFGVALAQPHTGATTFMFNLTTSIGELLK
>NZ_CP045696.1|WP_154328068.1|2252595_2253054_-|TonB-family-protein
MEKALRIDLLIFLSLFMMIPLAADAQRNARRVGQVNPMSPERLQYIEFYEFEQVDVQPEFPGGERGLVNYINNTREYPYNEYVHHQQGRVLCSFIIGTDGRVSHIQVIRSSGYAAFDQEAMRVIKKMPRWEAGRVRSSKVNVRCILPIAFRL
>NZ_CP045696.1|WP_154328067.1|2251408_2252263_-|ATP-phosphoribosyltransferase
MLRIAVQSKGRLYDETMELLKAAGIKLVAVKRTLLVPSKNFPVELLFLRDDDIPDSVATGTADIGIVGLNEVLEKHQRVNMLRKLGFSRCRLSLAIPKDADYNGPAWFNGKKIATSYPRILASYLKKNNLDADIHVISGSVEIAPGIGLSDAIFDIVSSGGTLVSNNLKEVEVVLPSEAVLIGSDRQLDDEKQNALDELLFRIEAVKTAETRKYVLMNVPKSRLKAVLAILPGIKSPTVLPLADDNWCSVHSVIEEKTLWTSINALKAVGAEGILVLNIEEMVP
>NZ_CP045696.1|WP_154328066.1|2250080_2251364_-|histidinol-dehydrogenase
MTVEITKYPDRSQWPALMRRAVAETRELHDTVASIMDQVREQGDKALRELALKYDGVQLGDLAVSPAEMQQACDQVSQELKAAIDQAAANIATFHKAQRMHELEVETSPGVTCCQRAVPITRVGLYIPGGNSPLFSTVLMLGLPARIAGCSQVVMCTPCGRDGKVNAAILYAARKCGISRIYKSGGAQAIAAMAWGTETIPRVSKIFGPGNRFVMEAKMQAQYNKVAIDMPAGPSEVMVVADGNADLRYVASDFLSQAEHGSDSQSTLLTTHEALASRLPQVIDELLATLPRQEMIKKSLGHSHIIVLHTLDEVIDYVNAYAPEHLILNCEECEALARRVVNAGSVFLGPYSPESAGDYASGTNHTLPTSGYAHAYSGVNLDSFTKKITFQRLTKQGLAGIGHTVETMAQAEDLMAHRLAVAVRLDK
>NZ_CP045696.1|WP_154328065.1|2248993_2250040_-|histidinol-phosphate-transaminase
MTDFDINSLVRPCIQALEPYSCARNEFHGQASVWLDANESPYNAPFNRYPDPLQAQVKAKLAQVKGVEAGNIFLGNGSDECIDLVYRVFCEPKTDNVVAMSPSYGMYEVCAHINDVAYRKVPLRPDFSLDVQALLGAVTPHTKAIFLCSPNNPTGNAIDTLLIERILDQAGCLVVVDEAYADFSSQPSMRHKLARHPNLIVLSTFSKAWASAGVRLGMAFASRAIVELFNKVKYPYNVNCLTQQYALEHLKKLDQLAGWRNAILAERGRLIDALARLPQVLKTYPTDANFVLVKTVDADGIYAHLCREGIVVRNRNRVEQCLGCLRITVGTPQENDAVINAISNYGNK
>NZ_CP045696.1|WP_154328064.1|2247864_2249007_-|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB
METNKKKALFIDRDGTIVVEPEADEQVDSYEKLQFLPGVITSLAFIARTLDYELVMVTNQDGLGTPAFPVESFTGPHELMLRTLEGEGVKFDDIIIDTTLEADHQPTRKPGIALLGKYTSGDYDLAGSYVIGDRLTDVELARNLGARAILLAPHVAQARQAVAQAGLDATLAVVAPHWQRVTDYLRGGQRTAHVQRYTKETRIDVWLDLDGTGQCQVSTGIGFFDHMLDQIGRHSGIDLKIKCKGDLYVDEHHTIEDTGIALGQAIYEALGDKRGIERYGFVLPMDDCHCTVALDFGGRSWLVWDARFSREMIGHMPTEMFFHFFKSLSDSARMNLYVSARGDNEHHKIECIFKGLARALKQAIRRDVFNYRLPTTKGAL
>NZ_CP045696.1|WP_154328063.1|2244536_2247623_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MRKQLLLLLFSIFAVMGFARTVTGVVTSATDKQAVIGASVRVHGTTRGVTTDIDGKFTIDASDNDVLDITFVGMKPISVKIGSQSSLNIVMTDNAQTLGEVVVTAMGQTQEKKKLNFAVQSLNADEVTAGGTSNFANSLQGKVAGLQVSTGGGSPNSSTQVIIRAISSINNGQNNEPLVIVDGVPVRGHGSSLGDINPDDIENMSVLKGAAASALYGQEAANGVIMITTKSGARDGSVKVNGNASVEFSTPMRVPQIQRVFTPGVRGMYKENSGSGGWGPYLQSDEQRYDNVGDFLGTGFLQKYDVSISGGTEKFNSYASVSYTNSDGIVPKDYKDQLTVFLKGMYKPSSQVTFNLSTNYVHSKSRGFGNAMSTIYNWGINHDMSDYQTKDGHVNWANYYDSWDELLDTQRIGAVVSPYFGRNRDNSKTQSDRIVINGQVSYEPIKDLVFTGKIGYDKGYSTYEGYTVPRLYDGDLVDPDNSDVKSILASNQSLYGSYSFDPSRSEQFTLQGLATYKKTIAQDFNINLLLGAEYKESTSYEASLYGEHFQLGGDYYSFMNTDFTNGDLLTSNHPKLSHTKYNKYGYFGELRFDYKGIAQLSMTGRYDGTSRLKQVDYNYFYPSVTAGVIFSELFHLTNSWFSYGKIRGNWAKVGKDCPAYQFTDTYKQWTLFPDGGYGVDPATSRAIALVPEMDSSWEIGADLRFFNSRTRLDIAYYSTTADNQIVSVRVSPASGTILQTRNEGTVKNHGMEISLAQDIIKTDDITWTANLNYSFNRGKVTKLPEGVVEIQGTQYGDIFPVARLNGSSTGISGKDYLRDPDGNVICDANGYPTINPAKGIYIGNREPDFLLGLGSSFRYKHATLSFLLDGRCGGDVANVTGRSLLSNGMAKIWEKYRNREYIVDGVQAVTLPDGTTGYVKNTTPIVLDQNYVNKYYSTVSSNFIEDGSYLRLSYVTLSYDFSSMLKKGWAVKNLSLSATGRNLFLLTKYTGNDPAVLVSTSGGTGGTGIDYYQVPVSRSFNFTLKATF
>NZ_CP045696.1|WP_154328062.1|2242604_2244512_-|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKKINIIALLMLTCLGMVSCGDTLDDNINPDKAHAIDAKNGLPTVIYYAQQIVYDHAEYNAYFSQMLTTGGKSSIGTYSYKSEWEMLTMNRHPMWRRHFYDIGVNANNVIANAAAINSPNYELIARTIKLMSTQLTTDAFGDMPRSQAYTSNAPKYDSQEQVYAWMMQECDDLIKAFDDKSITENPNNQVIGASSDRVYQGDLSRWKGLVLAIKARLLLRNLPNIDRSAAMCQKIVDAADAAITQWRSGSLLYGSWFGNEPRYYWNGGTGTQNAVWSIAQPVINSWESRANLLSQAIPSKFFMVDLLGLSNPDNESLSGLFAWTGHQHDGYANDPRCNLLMVARTGPKTASDDAATIKMRYLENNIGMGSSFKIANYPYLYMGAYAGATTAYNPLFTMEELYFIKAEAEYWLGNKAEACALAKEATEHNIERHLEAFELYHPNPNYDSKTDNKYPGKTTVSGEPAFESKEYWDAQVNAFLNNEDYYRGSSKKPSVYKVTDRGNEHWFFNPSNYTLSDLMEQKYIAMYLQPEQWTDMRRYHYSNNRNKYGIGDNQEIIYPTLRRPYNLYAAYWIDGLTEAQKENTWIQRINYDPETEEKYNKKELERLGAYKNYKWLQKPMIWAEDYGKVTSLTGK
>NZ_CP045696.1|WP_154328073.1|2256923_2257343_-|hypothetical-protein
MAKKPSKPSILQQVETDLRSFLSQHQQLILNERELQLRIAQFLLNTGCYSNVYLEYMLPVSMFPTNTHKYLNTHNFSLCHGITWRVKNWLNNQTATAKGRPDIVLRGQHPIRPWTKANIGQLNNGSNVTPVFKYTYTIF
>NZ_CP045696.1|WP_154328074.1|2258105_2260049_-|transposase
MKATFGTTKKGTWAYIQKSVRIDGKSTTKTVRRLGLLEDIRRKYGCQDPRQWVRDLAARMTEEEKAGRERISVDFYPGQTVGMGDLPLRAGGDLMLLPLYNRLGLPRMCAEIKKASKAKFDLDGILRTLVTGRLLFPCSKQRTLRKAQGLVRPPKFGEADMYRALSLLSGHIDDIQAGVYACSARFMERRDRVIYYDCTNYYFEIEDNDRDTVDIETGELVAGLRKRGKSKENRPSPIVQMGMFMDMDGIPLAFVVFPGNESEQATLQPLEDVLRRKFGLTEFVVSTDAGLASEGNRRYNMDQGRDYICVQSIPSLPAADRRAAVDPRGWRLGYCADGEKARLLHEKYSDGGLYNLDVLREGGQADSSLLRQTTFYKEILVDKTVKGLNPQWLEARRENPGATPVDARGRRIRQWQSSSRAERVIITYSHDFALFLRHKRAERLAAARKIVARGQANPRRSQQSPLNYIETIHKTDDGQTAVKTEMVINDDILGQEEKLDGFYAYATSLDDEAAFVLKARSFHHEIEHLFRTTKTHLEARPVYLSRQDRIRSHFLVCFLALLLLKLLQKQLADSFPEAYKEHPLTVDQLIDTLQNLRFGQIQGLGYVPMFQRTSLTDQLQELAGVEVNKQIITKAAMNAFYRKVNKG
>NZ_CP045696.1|WP_154328075.1|2260484_2261642_+|tyrosine-type-recombinase/integrase
MCAARKKLNSLSEVLKFTFPKLHTGPKWYVDFYAYDPATDTMRRKKFHLDNIGKITERRKRANEMIESLTKLLRSGWSPWINAETNRSYTLLEDALEKYEAYVERMPKYKTRKAYTSRLNIFRKYNASRLLPIRYVYQFDTAFVSDFLDYIFLDRETNARTRNNYRQWCASLATFFIEKQYLTTNPVEKIKAIAETGKKRQPLTAQMLHELEQHLREAHPYFYLACMMEYYTFIRPEELSHIKLEDISVKEQSVYISSAVSKNKRDGKVGLNDKIVKIMIALNVLTLPSNYYLFGPKVSRPCETRGDSEMFRRKWNKLVRKGLGWDDCYQFYSLKDSGLRDLANAEGIVIARDQARHTDVSTTNKYLQGRDAPVHEEIKHFKGNL
>NZ_CP045696.1|WP_154328076.1|2261638_2263699_-|hypothetical-protein
MIELLLDNKPAVLRENVAIKLTRENVYFNKTGSYTYDIELPMQCAENRAIFGSINRVDTVTEYRELHAVLRVDNKVLLDGKAVINQVTDSAVRVQLLGGNSEMNFYTKGAELYVDELDLGDWMHELSYQPEPQPAEKGTAFYRAVLDWIECVDIRFLNKPDSKDKSKAQNALEWWKKRWWTYDHSQGYDAYDNRGVAFPVINVNSSWNSYCDSGLLCNEIVMRMHGRDGNGNGYYFPEYRLEWENQEEKSDGTPQVCPSYMPMLCRTIRKVLSAVGYEIDLEGLKRLYTDNTLFRRIFIVTANNRVDIAKALPHWTVNEFLTQVERFLGIVVEVDEITKSCTLVNHQTWWSDTPLPIEDIVDEYTSEVEKEDTKDVSNGNIGFSMEDSEYHLSEDILGAATIDNRFTTFEQMQAYLRSGASANDKNKLFNVQGHQFILATVKDTNGNVTEYYFKEVNQFGALMRQPDKKDIDVELKIVPATTIMQNVPFVITSSYTQNGKTYYNERKVAEVPMPILAIEGPADVGEKILVRAADTVKTDLESLISGETTVDSASEVDKMYVAYVPESMTAIATEDLSCIGDYPVVQPCSDYEVKANSYGNKHISAHNFLTLQQLQDKETIGNTSFADGTVIDTTVKYCIKFISNEVLKPTRAFLIHGQRFACEKLEYNITAKGVSPLVTGYFYKLD
>NZ_CP045696.1|WP_154328077.1|2263695_2264178_-|hypothetical-protein
MSKDYDDDIGNKHEGCASMCIVIVIIFSMVVLLLSLCSCKTQYKVVEVPKVVTQEHTIESVRIDHVRDTLVQRDSIYHYVQGDTVRIERWHYLQGTTNVVRVDTVHVTDSVQVPVVTTQTIEKEVEVPRTLSWAQKTLMIFGGVSMIALLLLIAYKTRMR
>NZ_CP045696.1|WP_154329024.1|2264183_2264633_-|DUF882-domain-containing-protein
MKHFTMRELTHSATAQRLGINNEPTDAVKANLTTLVEHILDPLREAWGAPIIVTSGYRSPQLNKAVHGAASSQHMLGQAADIHAMSDNPEENRKLLDLIIKLGLPFDKLINEYPNRKMQPDWIHVSYSPMNRRQKFTCIKGKYIAGLNG
>NZ_CP045696.1|WP_154328078.1|2264669_2264984_-|hypothetical-protein
MKVIVVSFYEVKYGYTFAKLNAKVMRSDKKDSVATWSAVGMLAFGVGITTAGFIIPPSGEIHDSVLWVLGQTLLYSGSIFGITLYTNHKLGEIEETIANRLPKK
>NZ_CP045696.1|WP_154328079.1|2265055_2266834_-|FAD-dependent-oxidoreductase
MKGNIKKLENYPVSVTAGTYVTGTDITIDEVLHNPFLIRILEQNRNTLKRLIGKWEHNSTFYAASKSVAVKGDYWIYTGRVRVAIDGFVVMPNSIIYYDGRYMRPIDFKQVHDAQIKPKYDVCIIGGGAGGIGAAYALRNQGYRVCLVERLDTLGGTHCNAGVGLLIATPLGDWYKELAMDMNADGILNFYKYANSGNPYTGVGSGTHFERAWRSALFSDEKNRINGFKGNHLWLSDTRVGDRYLKDISEGGIDVLTNYELIETRAADSKVDEIIIRSLLDGATKTICADYFIDCSGNGVLFLNDNNLKLDVDYYIGTDPRDRFNETTYPSGYAGDHDGINTLEPIYYTVGRNYWPGEEVAPYPKYKRYSDLLNKDNFTYHSIGDINVAQKSQSYSTSMSAKAFREKSLEWNYADGLDRAIALSQGSTRRIQKMLGIREAYRIKCDRMLTTADLATQATSQNITDTHAIALSTWYVDIHTPTQSYTVNNIVANGIPYECMIPACYKNVLIGCRAYGASHLAQASARLAKTMMELGHSAGMAILQLLERNTVREDVRKVDVSALQNSIGIADLMAEIEEYFYGSTVNYEVLGT
>NZ_CP045696.1|WP_154328080.1|2266838_2268566_-|hypothetical-protein
MAKTIDELKSAAAVVRDATEEHENTALRIGQLLLDTIETLGDVQANAIKGFVAIASTDDLPESPTAEQQQKGWLLGTVLYVWVGTGGDTLGGKYKSAQLKGADGAPGEKGDKGESGVHLGDVALVNDLTTGGEVSALTAEMGKVLAARLAEADAKWTDIDHGEAMSVDCVKQIRFLTLTVIGDVYDSMSLDGVKNVMALTATYDDRSTEPLTEFTVTGVVKAGNQNFIATYNGIKASLAVEVLHRTATLASISANSSVNEVSMWTETEELRKYITVTKVYSDSTTELTKDYTLSGELQQGASTITVSYYGDTTKTTTLTFTGVNDGSYVTDSLEAMVDFSDYEDGYAGEIIDKAKGHQVVLNASLANAATKAPYGGIHGGKLVQAQWYEGTSGKGLTMDLKECAPAGVVTVELYARIRGKYSGSGATPTIGAISTSIIAMSSFAISPNSPYVNLCRYAPQGEINLNGPAANPDITTTGLNLPYYDSSHTDVRELVHIVYTIANKLQKLYVNGQLIIDDSKGGYSCTGGTDVRIFPNPGYVAADIAVVRVYGKALNNKEVQRNYLNCQAKHGSHIN
>NZ_CP045696.1|WP_154328081.1|2268673_2269774_-|HigA-family-addiction-module-antidote-protein
MATTKRTPFVPREAHHPGITLGEKLEELGMSVKEFAIRTSKPEKTINAILKGSSSITSDMAVAFENVTAIPARFWMQKQQNYNEYLSRIKREKLLNSSVAWSKSFPIAAMTALGWLPKVRSAIEKVDTLFRFFAVSSVSAWEDYYYNQQLKVAFRISLSQTKNPHAISAWLRQGELQAQSMHAATTYSPELLRKKLAEMRALVLDDSDDMPLKLQQICSECGIKLVFTKCLPKAPISGSTRWIQNEPCVQLSGRYKSQDRFWFTFFHEIGHILLHGKKAIFLEDIDYNGNEAKKEQEADTFATEALIDQRMFNAFVANGDFSKASIKSFANDCETSPSIVVGRLQHIGKLRFDVHNELKRNIELPY

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Crispr_ID: NZ_CP045696_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045696_9

2572891-2573022

Orphan

Consensus_repeat	Method
CATCGCTCACGTTGACGGTGCCGTCGCCGTTGATGTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045696_9

>merge|NZ_CP045696|9|2572891-2573022|CRISPRCasFinder
CATCGCTCACGTTGACGGTGCCGTCGCCGTTGATGTCGCACTTCAGGTTGCTGTAGTCGGCCTCGCCCAGCACCTTGTTGACCAGTGCAGTCGCATCGCTCACGTTGACGGTGCCGTCGCCGTCGATGTCGC

>NZ_CP045696|9|8|2572891-2573022|CRISPRCasFinder
CATCGCTCACGTTGACGGTGCCGTCGCCGTTGATGTCGC	ACTTCAGGTTGCTGTAGTCGGCCTCGCCCAGCACCTTGTTGACCAGTGCAGTCG
CATCGCTCACGTTGACGGTGCCGTCGCCGTCGATGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045696.1\|WP_154328348.1\|2578609_2579719_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|378215
NZ_CP045696.1\|WP_154328336.1\|2561019_2563152_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176217
NZ_CP045696.1\|WP_154329036.1\|2570593_2572234_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328350.1\|2580792_2582118_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP045696.1\|WP_154328349.1\|2579817_2580714_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|184556
NZ_CP045696.1\|WP_154328351.1\|2582267_2582906_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045696.1\|WP_154328337.1\|2563254_2565132_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP045696.1\|WP_154328343.1\|2569811_2570594_-\|Omp28-family-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378673
NZ_CP045696.1\|WP_154328353.1\|2583920_2586089_-\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|234942
NZ_CP045696.1\|WP_154328352.1\|2582974_2583766_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119375
NZ_CP045696.1\|WP_154328344.1\|2572288_2572777_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP045696.1\|WP_154328339.1\|2566290_2567988_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP045696.1\|WP_154328346.1\|2575269_2576670_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224586
NZ_CP045696.1\|WP_154328340.1\|2568018_2568654_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319790
NZ_CP045696.1\|WP_154328347.1\|2577017_2577866_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|341130
NZ_CP045696.1\|WP_154328342.1\|2569091_2569781_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271215
NZ_CP045696.1\|WP_154328341.1\|2568768_2568936_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|224071
NZ_CP045696.1\|WP_154328354.1\|2586153_2587785_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_CP045696.1\|WP_154328338.1\|2565138_2566044_-\|DUF3943-domain-containing-protein	unknown	unknown	gnl\|CDD\|379030
NZ_CP045696.1\|WP_154328355.1\|2587975_2591458_-\|type-IX-secretion-system-sortase-PorU	unknown	unknown	gnl\|CDD\|199210

Protein	Function_ID	Function_description	E-value
NZ_CP045696.1\|WP_154328348.1\|2578609_2579719_-\|CapA-family-protein	gnl\|CDD\|378215	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	2.67029e-85
NZ_CP045696.1\|WP_154328336.1\|2561019_2563152_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	7.02396e-79
NZ_CP045696.1\|WP_154328350.1\|2580792_2582118_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP045696.1\|WP_154328349.1\|2579817_2580714_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|184556	PRK14185, PRK14185, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP045696.1\|WP_154328337.1\|2563254_2565132_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	4.77213e-147
NZ_CP045696.1\|WP_154328346.1\|2575269_2576670_+\|AAA-family-ATPase	gnl\|CDD\|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.32366e-23
NZ_CP045696.1\|WP_154328353.1\|2583920_2586089_-\|membrane-protein-insertase-YidC	gnl\|CDD\|234942	PRK01318, PRK01318, membrane protein insertase; Provisional.	6.82082e-114
NZ_CP045696.1\|WP_154328352.1\|2582974_2583766_-\|hypothetical-protein	gnl\|CDD\|119375	cd06413, GH25_muramidase_1, Uncharacterized bacterial muramidase containing a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.	1.78331e-48
NZ_CP045696.1\|WP_154328344.1\|2572288_2572777_-\|redoxin-domain-containing-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.0333e-32
NZ_CP045696.1\|WP_154328339.1\|2566290_2567988_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP045696.1\|WP_154328343.1\|2569811_2570594_-\|Omp28-family-outer-membrane-lipoprotein	gnl\|CDD\|378673	pfam11551, Omp28, Outer membrane protein Omp28. Omp28 is a 28-kDa outer membrane protein from Porphyromonas gingivalis. Omp28 is thought to be a surface adhesion/receptor protein. Omp28 is expressed in a wide distribution of P.gingivalis strains.	1.06064e-37
NZ_CP045696.1\|WP_154328340.1\|2568018_2568654_+\|HAD-IA-family-hydrolase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.10328e-42
NZ_CP045696.1\|WP_154328347.1\|2577017_2577866_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	1.37584e-22
NZ_CP045696.1\|WP_154328342.1\|2569091_2569781_-\|hypothetical-protein	gnl\|CDD\|271215	cd14256, Dockerin_I, Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.	2.41402e-11
NZ_CP045696.1\|WP_154328341.1\|2568768_2568936_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|224071	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion].	1.9915e-12
NZ_CP045696.1\|WP_154328354.1\|2586153_2587785_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP045696.1\|WP_154328338.1\|2565138_2566044_-\|DUF3943-domain-containing-protein	gnl\|CDD\|379030	pfam13084, DUF3943, Domain of unknown function (DUF3943). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 110 amino acids in length.	5.95145e-50
NZ_CP045696.1\|WP_154328355.1\|2587975_2591458_-\|type-IX-secretion-system-sortase-PorU	gnl\|CDD\|199210	cd02258, Peptidase_C25_N, Peptidase C25 family N-terminal domain, found in Arg-gingipain (Rgp), Lys-gingipain (Kgp) and related proteins. Peptidase family C25 is a unique class of cysteine proteases, exemplified by gingipain, which is produced by Porphyromonas gingivalis. P. gingivalis is one of the primary gram-negative pathogens that causes periodontitis, a disease that is also associated with other diseases such as diabetes and cardiovascular disease. Gingipains are a group of extracellular Arg- and Lys-specific proteinases called Arg-gingipain (Rgp) and Lys-gingipain (Kgp); RgpA and RgpB are homologous Arg-specific gingipains encoded by two closely related genes, rgpA and rgpB, while Lys-specific gingipain is encoded by the single kgp gene. Mutant studies have shown that, among the large quantities of proteolytic enzymes produced by P. gingivalis, these three proteases are major virulence factors of this bacterium. All three genes encode an N-terminal pre-pro fragment, followed by the protease domain; however, rgpA and kgp also encode additional C-terminal HA (hemaglutinin/adhesion) subunits which consist of several sequence-related adhesion domains. Although unique, their cysteine protease active site residues (His and Cys) forming the catalytic dyad are well-conserved, cleaving the C-terminal peptide bond with Arg or Lys residues. Gingipains are evolutionarily related to other highly specific proteases including caspases, clostripain, legumains, and separase. Gingipains function by dysregulating host defense and inflammatory responses, and degrading host proteins, e.g. tissue, cells, matrix, plasma and immunological proteins. They are proposed to enhance gingival crevicular fluid (GCF) production through activation of the kallikrein/kinin pathways, thus increasing vascular permeability and causing gingival inflammation, a distinctive feature of periodontitis. RgpA and RgpB are also able to cleave and activate coagulation factors IX and X in order to activate prothrombin to produce thrombin, which in turn increases production of GCF. The gingipains also play a pivotal role in the survival of P. gingivalis in the host by attacking the host defense system through cleavage of several immunological molecules, while at the same time evading the host-immune response by dysregulating the cytokine network.	1.66371e-91

>NZ_CP045696.1|WP_154328344.1|2572288_2572777_-|redoxin-domain-containing-protein
MKKTFAIIMLLCALAPLAQAQLPAVTLKTIDGRTVRTDTLNNGGKPFIIDFFATWCKPCNRELKAINEVYADWKEETGVKLIAVSIDQAQNINKLKPMVDEQGWEYEVLLDPNGDFKRALGVQLIPYVLIVDGNGKIAYKHNGYTDGAENELIEKVRELLSK
>NZ_CP045696.1|WP_154329036.1|2570593_2572234_-|hypothetical-protein
MLPAALPAQEAGESGDEKKVTVSGSVQSDVQIPTGHTDADKSNDDVRTNTYAEVNAMSKWVDAGVRFAYLEHPLPGYEADFKGWGVPFYYVKGKFNVAEVTLGTFYDQFGSGFIFRTYEERSLGIDNSILGARVALNPVKGVHIKALTGRQRRYWHHNKAWITGADMELNLDQWIKPLASSNTYVTLGASWVNKREKDSTDVIYADNTHILNLPTYVNACDVRAQVQHGPYSVLLEYARKGQDPSFDNGYTYGKGYVAMLSASYSKRGLSLLLQAKRSDNFSFRSRRSMSGTSSMLNHLPAFTEDHTYTLAALYPYATHPMGEWAYQAQFGYNFKRRTTLGGRYGMNVKVNFSHVHSLKTTPTAAGGLPDIAPGAPGTDGYTSKFWGWGNSTYYQDINAQIERRFSRSFKLSVTYMNQFYNKTIVEGEGGMIHSDIMIADALFNLGAKTTLRTELQYLATKDDDGDWLFALAELSLAPHWMLTVSDEYNSGKTGEHYPGAYVTYNVGAHRLQAGWARTKAGYNCSGGVCRYVPETKGVVISYNYNF
>NZ_CP045696.1|WP_154328343.1|2569811_2570594_-|Omp28-family-outer-membrane-lipoprotein
MKKTIYILLLAIVQLAVTTSCSNDDERYIYVKPADVNRNVLIEDFTGQRCLNCPNASAQIDSLIAQYGHDAIIAVSIHSGPLGFKGSAKFTGLATSLGDTYYNHWNCDHQPIGLVNRVGGLQDYPAWPALVRQALSLKSTIEMEATVSYNDTTHEASIKVNMLGTNGTTRGKLQLWVIEDSITAMQVMPDGKPKPDYVHKHVLRAAVNGDWGQDVTIDEGVESTATAHYTVDKAWDPKHLWIVAFVYNNDGVVQVIKSHF
>NZ_CP045696.1|WP_154328342.1|2569091_2569781_-|hypothetical-protein
MKRSILAIAIAALWAASGSAAADGTFAFVDASGNTIADGATVTCNKLVDDEFLGRYISTGLYVKNTTGSKAAGVVLLDVNNMPNGHVQICCFGNCVSPDKPGNYYSAKNFMEAGATEDLQAEWFPAEKATWTATLQLATVETTTNAAGILTLGKVKDLGPKVNVVWSYSDSLKGDINGDGTVNVTDVTTLINGILGTAQVDTSVGDVDGNGIVNVSDVTALINIILAAS
>NZ_CP045696.1|WP_154328341.1|2568768_2568936_+|4Fe-4S-dicluster-domain-containing-protein
MAYVIDDNCVACGTCQSVCPTGAISEGDKYSIDPDTCISCGSCAEACPNEAIHEG
>NZ_CP045696.1|WP_154328340.1|2568018_2568654_+|HAD-IA-family-hydrolase
MMSNKTKIKNIIFDFGGVLSVLDINISRQRFIELGVTNIDDYLDITAQKGFFGQLEDGSLSADEFCRRLSELTHRKLTLEQCAHAWRGFIVDIPKRGLVGLRQLRAQGYHLSLLSNTNPFVGSLMHDANFDGEQHPLTSYFDAAYLSYEQHLMKPDLRFFKRVLDEQHYAPAQTLLVDDSPVNCAAAQQLGINTYQPANGENWPALIARHL
>NZ_CP045696.1|WP_154328339.1|2566290_2567988_+|energy-dependent-translational-throttle-protein-EttA
MATVDDKKVIFSMVGLNKIIKQTNKQILKNIYLSFFYGAKIGIIGLNGAGKSTLLKIIAGIDNDYQGEVVWAPGYTVGYLPQDPPLDPDKTVLEIVKEGVKPVVDALAEYEEINRKFGEPEYYENEDKMNELFARQAEVQNIIDSTDAWNLDTRLERAMQALRLPPADQKAAHLSGGERRRVALCRLLLSKPDVLLLDEPTNHLDAESIDWLEQHLNQYEGTVIAVTHDRYFLDDVAGWILELDRGEGIPWKGNYSSWLDQKSKRMAQEEKTASKRRKTLERELEWVRMAPKARQAKGKARLNSYDKLLNEDQKEKEQKLEIFIPNGPRLGNKVIEAHHIAKKFGDKVLYRDLNFSLPPAGIIGVIGPNGVGKTTLFRLIMGLDKPDEGTFEVGETVKLAYVDQQHKDIDPDKTVYQVISQGNELMRLGGRDVNARAYLSRFNFSGADQEKKCGVLSGGERNRLQLALALKQEGNVLLLDEPTNDIDVNTLRALEEGLDEFAGCAVVISHDRWFLDRICTHILAFEGNGEVFFFEGGYSDYEANKAKRLGIEEPKRARYRKFDAD
>NZ_CP045696.1|WP_154328338.1|2565138_2566044_-|DUF3943-domain-containing-protein
MTTPCYSRPLRAILLPEIFMRTILIYIVIFMSLTARAATISASNEADSTTAAIDTAALASLEATCSSASVQSPLAAAKPLTLYDMPYSPTRHMENWGRLAYNTATFVGAGVVTLLVLECLPEGATAWDKSEIKHTPFWHRYGNHVKEGPVWDKDNAVFNYVLHPYGGAVYYMSARSNGFNILGSMLYTTFVSNVLWEYGIEAFMEIPSIQDMIITPIAGTVIGEGFYRLKRKIVQDDYRLFGSRAMGVAVAWIVDPINEFVNLFAGNPCKRGKHAASITCSPSIDLLGRRPQVGFTAVITL
>NZ_CP045696.1|WP_154328337.1|2563254_2565132_+|DEAD/DEAH-box-helicase
MTTFQDLGVREDLLRAITELGYETPMPIQEKVIPHLLNEDSDVVGLAQTGTGKTAAFGLPTLQRIDTACACTQAVILDPTRELCLQTCSDLTDYAKYIDGLNILPVYGGSSIEVQIRALRRGVHIIVATPGRLLDLIKRGEVNLEHVNTVILDEADEMLNMGFVDDINEILSHVPEQRKMLLFSATMPKEIAAIAKNYMHNPQEYVVGTRNEGSANVRHVYYMVRAQDKYLALKRIVDYLPRIYGIIFCRTRATAQEVASNLIQDGYNADALHGDLSQAQRDAVMKKFRERNLQLLVATDVAARGLDVDDLTHIISYSLPDDNDVYNHRSGRTGRAGKTGVSIAIIHSRERGKLREIEKHIGKQFERREVPKPNEIIEKQLFNLADRIEKVEVKEDEIAQYLPSVLKKLSWLTSEELLKRLLSLEFNRLLDYYKDAPVLDYVPEKKPREKRVKYDKTRTAADKDSRTAEEGYERMFINVGKADGFFAPSLIQLLNDNTHGQRIDLGRIDLLTNYSLFDVRQGDAHRVVSALKNVDFFGKRLYLEIADPNKDYAAENAGTEVKLNRRERRRAMYGDRPRERRRGYGGNFDDKHYGRRAGKPAPRTRRDSERGFARDKQGRKRDRKS
>NZ_CP045696.1|WP_154328336.1|2561019_2563152_+|zinc-binding-dehydrogenase
MEQLTQKLGSGEMVIQELPIPQLSSGMILVKNHFSLISAGTEGTTVKTARKSLIGKAKERPQQVKQVLDTLKTKGVVQTYRAIMKKLDAYSPLGYSCAGEVIDVADDVTGFKVGDKVACAGAGYANHAEVVAVPVNLCVKLHDDADLQLACYNTVGAIALQGVRQADMRLGETCAVIGLGLIGEIVCRLLRASGINVVGIDISEAAVNAAKSTCVDLGLPRNTPGIEEQISAYTDGLGVDAVIITAGTSSLDPINFAGAICRKKGRVVVLGAVPTGFERNPYWYKKELELRMSCSYGPGRYDLKYEENGIDYPAPYVRWTEKRNMEAFQQLVYSGKIDLSPLTTHRFKFEDAPKAYDIIARRLEPYLGIVLEYDANKEHQRKAMTIAGNVALKDINIGFIGAGSYAQSNLLPYLPSEGEVGRICVMTNSGTTSKRVAEKFHFAQCTSSENDIINNKDINTLFIATRHNTHAKYVIDGLKAGKNVYVEKPLCLKMDELVEIQQLCEEKRCGVMIGFNRRFSPLTPIVKREMGNGKMSMIYRINAGYIPSSSWIQDPKVGGGRILGEVCHFIDLMAYMCGSNPVQVSASVLPDPEGLNDTVNILVDFSNGSTGVVSYYANGPKSLPKEYFEVFSSGKAAILCDFKSCKIYGSSVKTHKLSVQDKGQKEMMQAFFKSLKDGSMPIPLDEIFSVTKATFAVLKSIQQAGAPVRF
>NZ_CP045696.1|WP_154328346.1|2575269_2576670_+|AAA-family-ATPase
MDFIDRNKELGRLEAALNGCKGKLLVVYGRRRLGKSRLIKKILKEEDVYYEATKSESATQRLGLAASVALSYHDFDKPTYSTWDSLLSAFNNQCKEGATLILDEFPYLVERDASLPSTIQSIVDSGSMRYNLLICGSSQRMMQKLVLDGSEPLYGRASEKINLGPIRAQYWWHALNLTAKQVIEEYSVWGGVPRYWVLREQYCSLDNALENLILDEQGPLVEEPEALFLDDTNVIAPYISIMTAIGQGNAKISRIADVVGHKVSELAPVMKNLIAMHYVRKEVPFGEDAEKSKKTLYVIDDPFLDFYYRFVVPARPLLSIDRTDVVLQNIHNHMAEHVEHIWERLCQIAVSGNNMFGHTWNAAAHWWGKVPVFKEGRKTPTGNRELEFDVVAESMDDRDTILVGECKWKSADHAERLLAQLQEKVKYAPFAKGKKIVYALFLREKPLSTADCEMMFPEDVLNNLPK
>NZ_CP045696.1|WP_154328347.1|2577017_2577866_+|L,D-transpeptidase-family-protein
MKTYFFILTAVAALVVVAGCGKGKDAHGNNDAAQPVELTAQGELAQSGQAGTIAALPFSGSDVKEHVVLDYGNRTVRAVPDVSFSHPELMKEKKNCFVVISKKDFYLYVYEPQGTDTVMLARYDCALSLKKGQKTAEGDMCTPHCSMQQPFSVSQIAPASSWTHDFGDGRGAIKSYGDYFLRLVTPGHSGIGIHGSTGNRESVPGRASEGCIRLKDEDIKDLVQHYATVGMRVVIKGETVDDYPFEIHAMTRQKIARKRHFDPRTTLTNAQIEQARPEPGRR
>NZ_CP045696.1|WP_154328348.1|2578609_2579719_-|CapA-family-protein
MSQLISILLLSLLQLLVGTDTLSIYNPHLAGADSVDLLFAGDAMQHAPQNKAALQRNGTYDYTACFALLEPYIKAADYAVVNLETPLGGRPYTGYPCFSAPDEYAWQLKKSGFDLLLTANNHCLDRRDAGLRRTIKTLDAMKIAHIGTYTDAADRQSRLPFIADIKGMKVAFLDYTYGTNGITVQGDVVVDYIELHKMQADIEAARAAGAQAVCVNMHWGIEYKLAPSSEQRSLAQWLVDHGVELVIGGHPHVLEPFKMVHSSVTGKDALVVYSMGNFISAQKPLDTRVGAIVRVTLKTGTDGKISIARAGYKLFYCQHPGWKGDNYRLIPDDRREMVRKSDRATYDAAMARARNLVMAHNVQVLPLKQ
>NZ_CP045696.1|WP_154328349.1|2579817_2580714_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MQVEQMQLIDGKKVAAQIKQEIAAEVKNMIAAGKKQPHLAAILVGHDGGSETYVSHKVKACAECGFKSTLLRYEADVTEAQLLEAIAGLNADPDVDGFIVQLPLPKHIDEQKVIEAIDYRKDVDGFHPINVGRLSIGLPCFRSATPQGILTLLERYNIETSGKHCVVIGRSNIVGKPVAAMMMQKSYPGNCTVTVCHSATAHLKEITRTADILIAAIGRPEYVTEDMVKDGVVVIDVGTTRLPSTTTKSGWKLHGDVDFEHVAPHCSYITPVPGGVGPMTICSLMKNTLLAAKHEIYK
>NZ_CP045696.1|WP_154328350.1|2580792_2582118_-|signal-recognition-particle-protein
MFENLSERLERSFKVLKGQGQITEINVAETMKDVRKALLEADVNFKVAKDFCNRVKAEAMGQNVINSVEPRQLMVKIVHDELAKFMGGEQAPFNVDGNPAVILMSGLQGSGKTTFSGKLANRLKEGKKKKPLLAACDVYRPAAIEQLKTVGQAIGVPVYSEPESKDPVAIALHAIDEAKKTGCDVVIVDTAGRLAVDEEMMKEIKNIKDAIKPNETLFVVDSMTGQDAVNTAKAFNDRLDFDGVVLTKLDGDTRGGAAVSIRAVVNKPIKFVGTGEKMGEIDAFNPNGMADRILGMGDIVSFVDRMQQQYDENEAKKIEKKIRENKFDFNDFRNQINQIKKMGNLKSLASMIPGVGKAIKDIDINDDAFKGIEAIIDSMTPYEREHPEIMNGSRRKRIAAGSGTRIDEVNRLLKQFDQTRKMMHAVTTKNPMKMMRGMRRR
>NZ_CP045696.1|WP_154328351.1|2582267_2582906_-|hypothetical-protein
MKHFIHILLLAMALAVSAMIPAQAVDMHWSKYDLNFTVPDGGFVMENTPTFFAEHWDDMELSLTLYTKDEKAKKEIYSTSLFKIASQYNMYDVKKGKVKVKGFDGYSVEGIMPDGTRAIIVNLVSKKTDLVVQVFAHYFFGDREVVDDIVKSFSINKYSQPNREQLKQKVKMPDGSSQVVVKKSKEQLEQEKKEKAEREFERKKAQGQIKDI
>NZ_CP045696.1|WP_154328352.1|2582974_2583766_-|hypothetical-protein
MARGRRRRHRSTRSRRRRKRSGRLLNCLVATGLAALVMLAAALYWLWSGTRRPHVEIDPARYPVTGIDISQHNGDDIDYDKVRASGITFVYIKASEGTRGRDKNFLTNARKARQAGLVTGAYHYFRKGADGRLQARNFLQAVSHTRLDLPLVVDVEDWLNDPKVSNHATATGVRAMLDYLLMHGRRVMLYTNREGYKKWVKPYFASIDLWLCAFNPPQDLEQERHVMQQYSHWGTVDGIDGDVDLDVFNGSHAEWQRWLEAGS
>NZ_CP045696.1|WP_154328353.1|2583920_2586089_-|membrane-protein-insertase-YidC
MDKNTIIGWVLIGLIFIGWMTMTNKQAQKEQQAQQKAQKEQVEAEKAHAAAVAVRDSMSADELALLKQNIEQFGGDSAKIAAGSNSVSLAQGQLEGTLNVDGQAVDVAQLLAGKVASTQVNNDALKALRDLSDTYGKNGPLASKLKGTNQIVKLKNDSLEIEISSKGGMITRATLLGWPSANLDEHHKLNTEQKHLKPVELFSPGENSYSFVLNTNERRYDTKDFYFTPRQLNDTTVEMDLNMPGNAMFGIRYTLAKGGNYMVRMELVQRNMEAIVPTNVSDMDFNWHQKMGRHEEGKMFEERNSTIYYQYAESDGGGDVKYLPETSAKEEDMQDRLKWISTKGQFFSAVLIADNSFVGARLKSVPTEQGTPEYQRFLKNLSISSSLDYKSTVSRPASFFFYFGPNRYRILSHYKDMMAKYSSASKNEAAYNNLELTRLIPLGWTLFRWINTYIVIPVFNWLGTFIHSYGIIILILTILIKLVLSPLTYKSYKSQAVMRILAPDIQAINEKYPGQDNAMKRQQKTMALYNQAGANPMGGCLPMLLQFPILVAVFAFFPSCIELRGQSFLWAHDLSAPDAIVSWSGQIPFITNYFGNHISLFCLLMTATNIIYTYLTMQSQAQSSSMPGMKWMMYLMPVFFLVFFNNYAAGLSYYYFVSLLITIIQTYAIRAMIKEDKVRAQMAANAKKPKKKSGFMARLEEAQRQQQAALREQQKKNGKKRR
>NZ_CP045696.1|WP_154328354.1|2586153_2587785_-|CTP-synthase
METRYIFVTGGVVSSLGKGIISSSIARLLLSRGFNVTIQKFDPYINIDPGTLNPYEHGECYVTVDGHEADLDLGHYERFTNIKTTRANNITTGRVYQSVIDKERRGDYLGKTVQIIPHITDEIKRDVKLLANTGKYDFVITEIGGTVGDIESTPFLEAVRQLKWELGNRCICVHLTYVPYIKAAKELKTKPTQHSVKMLQQVGIQPDILVLRTEKEIPLAMRRKVAQFCNVSVEAVTQSVDCPTIYEVPLMMHAQKLDNIILDKTATPYSGEPDLTKWNKFLDHMKKATHVVTIGLVGKYVELQDAYKSIDESLLQAATYHDHKLKIKYISSEKLNDGNVEEQLSGMDGVIVAPGFGVRGTEGKFVALKWCREHDMPTFGICLGMQCMVIEFARNVLGLAEANSTELDPNTPYNVIDLMEEQKSVTNMGGTMRLGAYACHLKPGTKVAEAYGKLDIEERHRHRFEFNDDYRKQFEAAGMECVGENPDTHLVEVVEMPSKKWYIGTQYHPEYSSTVLNPHPLFMNFIEAAIANKEEKEKKVKQQ
>NZ_CP045696.1|WP_154328355.1|2587975_2591458_-|type-IX-secretion-system-sortase-PorU
MIHHPVVARALCIGLLACATAIAAFGFNASNYASTSKLATGKWVKISVAESGVYQLTSDELKAMGFSSPEKVRVYGRGGNVLSEVLDGKAPDDLTMVPVAKYGDKICFYGRGPLTAEIADPRTKVPHYTRKINPYATRGCYFLTEEAGTGDTIETAPTSLTMGTMPRATSLDYCLHEQELTSPGSSGKTLLGEDIASAETSFGFKLPGLVSGTPVLAYTSVGAKVSALANIYTYIDMGGYTDTVAYSSTTNKIYASTSTTVYYNSATTLGQVTPRGHSETGKVRLGISTTGQVTNANLDYVMLTYYHSNAIPRGQSQVRMGFANLTDTDRIELQDVAGGNLVVWNIDDPAAPKRCDYTTYVIADSTAAGTTIVHGFTPGQDLRSSQYIAFNPQDTLMCISGWEAVDNQNIHGEATPHMVIVTCKPFMQQAQRIANMHAKVDGWRVLVVDQEKVFNEFSSGTPDAMAIRLMNKMFYDRDKSTFRYLLLLGCGTYDNRSLVSKKANTVLTYESDNSSDESYSYVCDDFYGMLDDNSGSNMSTSTLRLGVGRIPSATVDEATSDVDKLLNYVENPDYGPWRDNAMFWADDIQFSENTLHVFQAEGALQLINQELGVGFNTDRAYVSMYPVATELAEPGQSAETYTAVEAKRHISQMFNTGQYFATYVGHAGPISFGRSSHLWTQTDAEHCVNEHLPIMTTACCDIARYDSETRGVGEIMFHKPDGGVIAMITSARTVNASDNDALNRLFINAMFAFGKTGQYPRIGDAYMACKQPVGRTSSYNLNKMSFLLLGDPAIKVNYPKPLFKVSKVNGYNIDENTKSYTMPLRTVSIEAKVMKSDLKSVDTSFNGDGYFTLYDRETRYIQATQNFNGTKTTRDVYYPRNMLAQVKGRVVKGVMTAQITIPRYVESVTGNTGLISFYAHQDNSSTMVNGRYTKLLIDTYAPTGAIVDNEPPVVHDMYFNDAADAAESVLVPSNSTLYINVSDNVAVNTQKGGVGTSMNLKLDGGKTSYMLVKDYAVATNNGKNVNIAFPMTGLESGTHTLTFEVCDVACNKTSRTITFTVGEASRAAISTRESVVSDQVVFELKSETAVTPSMTLKVTDSSGNLVYTKPDCTFPWTWDLTTKSGQRLKPARYRYYGTYEAGNHYGGTAIGTFTVLEKQK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045696_3	3.10\|683483\|30\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683483-683512	30	NZ_CP045696.1	2213897-2213926	1	0.967

1. spacer 3.10|683483|30|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to position: 2213897-2213926, mismatch: 1, identity: 0.967

tcatcagagagacagccgccgcgctctttc	CRISPR spacer
tcatcagagagacagccgccgcgctctctc	Protospacer
***************************.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045696_3	3.13\|683682\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683682-683708	27	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1168044-1168070	2	0.926
NZ_CP045696_3	3.13\|683682\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683682-683708	27	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1012066-1012092	3	0.889
NZ_CP045696_3	3.16\|682959\|24\|NZ_CP045696\|PILER-CR	682959-682982	24	NC_009425	Enterobacter sp. 638 plasmid pENTE01, complete sequence	97952-97975	3	0.875
NZ_CP045696_3	3.13\|683682\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683682-683708	27	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1178975-1179001	4	0.852
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NC_022772	Salmonella phage Marshall, complete genome	92140-92166	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NC_049440	Salmonella phage SenALZ1, complete genome	141751-141777	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MN871504	UNVERIFIED: Salmonella phage SeTs-2, complete genome	142063-142089	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MT974436	Salmonella phage ISTP3, complete genome	68147-68173	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MN871501	UNVERIFIED: Salmonella virus Se-U, complete genome	107329-107355	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MN871493	UNVERIFIED: Salmonella phage Se-E, complete genome	22283-22309	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	KJ174318	Salmonella phage vB_SalM_SJ3, complete genome	155892-155918	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MK972699	Salmonella phage SS9, complete genome	97461-97487	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	KY630163	Salmonella phage S8, complete genome	11523-11549	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NC_027119	Salmonella phage Det7, complete genome	47631-47657	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MT074478	Salmonella phage moki, complete genome	69646-69672	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MK972690	Salmonella phage SE14, complete genome	131008-131034	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MG428992	Salmonella phage Mutine, complete genome	97731-97757	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MH791405	UNVERIFIED: Salmonella phage SeSz-1, complete genome	58821-58847	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MN871475	UNVERIFIED: Pseudomonas virus Pa-sanjiao, complete genome	96622-96648	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	LR811969	Salmonella phage Se_EM3 genome assembly, chromosome: 1	94890-94916	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MT074475	Salmonella phage dinky, complete genome	69353-69379	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NC_049378	Salmonella phage ST-W77, complete genome	10741-10767	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	KY787213	Salmonella phage BSP101, complete genome	116626-116652	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MH709121	Salmonella phage SeLz-1, complete genome	141751-141777	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MT074470	Salmonella phage heyday, complete genome	71491-71517	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MN871500	UNVERIFIED: Salmonella phage Se-S, complete genome	114921-114947	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	KX171211	Salmonella phage vB_SenM-2, complete genome	47631-47657	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MN953776	Salmonella phage chennai, complete genome	103426-103452	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	MK972698	Salmonella phage SS3, complete genome	53477-53503	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NC_049502	Salmonella phage bering, complete genome	70675-70701	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NZ_CP003713	Zymomonas mobilis subsp. mobilis NRRL B-12526 plasmid pZM1252604, complete sequence	7677-7703	5	0.815
NZ_CP045696_3	3.15\|683813\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683813-683839	27	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	249277-249303	5	0.815
NZ_CP045696_3	3.15\|683813\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683813-683839	27	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	551100-551126	5	0.815
NZ_CP045696_3	3.15\|683813\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683813-683839	27	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	551233-551259	5	0.815
NZ_CP045696_3	3.1\|682894\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682894-682920	27	NC_049433	Escherichia phage EP75, complete genome	30690-30716	6	0.778
NZ_CP045696_3	3.2\|682958\|27\|NZ_CP045696\|CRISPRCasFinder,CRT	682958-682984	27	NC_009425	Enterobacter sp. 638 plasmid pENTE01, complete sequence	97950-97976	6	0.778
NZ_CP045696_3	3.10\|683483\|30\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683483-683512	30	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	844062-844091	6	0.8
NZ_CP045696_3	3.15\|683813\|27\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683813-683839	27	NZ_CP020455	Vibrio coralliilyticus strain SNUTY-1 plasmid pSNUTY1, complete sequence	17673-17699	6	0.778
NZ_CP045696_3	3.7\|683287\|29\|NZ_CP045696\|CRISPRCasFinder,CRT	683287-683315	29	NZ_CP016293	Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence	130906-130934	7	0.759
NZ_CP045696_3	3.7\|683287\|29\|NZ_CP045696\|CRISPRCasFinder,CRT	683287-683315	29	NC_011981	Agrobacterium vitis S4 plasmid pAtS4e, complete sequence	30424-30452	7	0.759
NZ_CP045696_3	3.12\|683615\|30\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683615-683644	30	KX397372	Erwinia phage vB_EamM_Phobos, complete genome	189081-189110	8	0.733
NZ_CP045696_3	3.6\|683220\|30\|NZ_CP045696\|CRISPRCasFinder,CRT	683220-683249	30	NZ_CP039853	Salinimonas sp. KX18D6 plasmid plas12, complete sequence	291271-291300	9	0.7

1. spacer 3.13|683682|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 2, identity: 0.926

ttgttgctgtgcacggtgtcgcagcgg	CRISPR spacer
ttgttgcagtgcacagtgtcgcagcgg	Protospacer
******* ******.************

2. spacer 3.13|683682|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.889

ttgttgctgtgcacggtgtcgcagcgg	CRISPR spacer
ttgttgcagtgcacagtgtcgcagcgt	Protospacer
******* ******.***********

3. spacer 3.16|682959|24|NZ_CP045696|PILER-CR matches to NC_009425 (Enterobacter sp. 638 plasmid pENTE01, complete sequence) position: , mismatch: 3, identity: 0.875

tatgcatctttatcgttcagcagc	CRISPR spacer
tcagcatctttatcgttgagcagc	Protospacer
*  ************** ******

4. spacer 3.13|683682|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 4, identity: 0.852

ttgttgctgtgcacggtgtcgcagcgg	CRISPR spacer
ttgttgcagtgcacagtgtcgcagtgt	Protospacer
******* ******.*********.*

5. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_022772 (Salmonella phage Marshall, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

6. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_049440 (Salmonella phage SenALZ1, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

7. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MN871504 (UNVERIFIED: Salmonella phage SeTs-2, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

8. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MT974436 (Salmonella phage ISTP3, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

9. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MN871501 (UNVERIFIED: Salmonella virus Se-U, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

10. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MN871493 (UNVERIFIED: Salmonella phage Se-E, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

11. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to KJ174318 (Salmonella phage vB_SalM_SJ3, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

12. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MK972699 (Salmonella phage SS9, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

13. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to KY630163 (Salmonella phage S8, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

14. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_027119 (Salmonella phage Det7, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

15. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MT074478 (Salmonella phage moki, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

16. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MK972690 (Salmonella phage SE14, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

17. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MG428992 (Salmonella phage Mutine, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

18. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MH791405 (UNVERIFIED: Salmonella phage SeSz-1, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

19. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MN871475 (UNVERIFIED: Pseudomonas virus Pa-sanjiao, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

20. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to LR811969 (Salmonella phage Se_EM3 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

21. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MT074475 (Salmonella phage dinky, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

22. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_049378 (Salmonella phage ST-W77, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

23. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to KY787213 (Salmonella phage BSP101, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

24. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MH709121 (Salmonella phage SeLz-1, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

25. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MT074470 (Salmonella phage heyday, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

26. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MN871500 (UNVERIFIED: Salmonella phage Se-S, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

27. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to KX171211 (Salmonella phage vB_SenM-2, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

28. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MN953776 (Salmonella phage chennai, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

29. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to MK972698 (Salmonella phage SS3, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

30. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_049502 (Salmonella phage bering, complete genome) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgctcacgggcttggcgaatagaagt	Protospacer
 . *************** ******.*

31. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NZ_CP003713 (Zymomonas mobilis subsp. mobilis NRRL B-12526 plasmid pZM1252604, complete sequence) position: , mismatch: 5, identity: 0.815

accctcacgggcttggcgcatagaaat	CRISPR spacer
tcgctcacaggcttggcgaatagaaaa	Protospacer
 * *****.********* *******

32. spacer 3.15|683813|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 5, identity: 0.815

cggctggcacgtcggtgagttggtcaa	CRISPR spacer
cggctggcacctcggtgagctggggag	Protospacer
********** ********.***  *.

33. spacer 3.15|683813|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 5, identity: 0.815

cggctggcacgtcggtgagttggtcaa	CRISPR spacer
cggctggcacctcggtgagctggggag	Protospacer
********** ********.***  *.

34. spacer 3.15|683813|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 5, identity: 0.815

cggctggcacgtcggtgagttggtcaa	CRISPR spacer
cggctggcacctcggtgagctggggag	Protospacer
********** ********.***  *.

35. spacer 3.1|682894|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_049433 (Escherichia phage EP75, complete genome) position: , mismatch: 6, identity: 0.778

accctcacgggcttggcgcatagaaat	CRISPR spacer
ctgatcacgggcttggcgaatagaagt	Protospacer
 .  ************** ******.*

36. spacer 3.2|682958|27|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_009425 (Enterobacter sp. 638 plasmid pENTE01, complete sequence) position: , mismatch: 6, identity: 0.778

gtatgcatctttatcgttcagcagcca	CRISPR spacer
ttcagcatctttatcgttgagcagcat	Protospacer
 *  ************** ******

37. spacer 3.10|683483|30|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 6, identity: 0.8

tcatcagagagacagccgccgcgctctttc	CRISPR spacer
tcatcagcgagacagccgtcgcgcgacttg	Protospacer
******* **********.*****  .**

38. spacer 3.15|683813|27|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020455 (Vibrio coralliilyticus strain SNUTY-1 plasmid pSNUTY1, complete sequence) position: , mismatch: 6, identity: 0.778

cggctggcacgtcggtgagttggtcaa	CRISPR spacer
gggctggcacatcggcgagttggtgcc	Protospacer
 *********.****.********

39. spacer 3.7|683287|29|NZ_CP045696|CRISPRCasFinder,CRT matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.759

gcttatctgcgacagaaagaagtcgttct	CRISPR spacer
cacgatcagcggcagaaagaagtcgttcc	Protospacer
  . *** ***.****************.

40. spacer 3.7|683287|29|NZ_CP045696|CRISPRCasFinder,CRT matches to NC_011981 (Agrobacterium vitis S4 plasmid pAtS4e, complete sequence) position: , mismatch: 7, identity: 0.759

gcttatctgcgacagaaagaagtcgttct	CRISPR spacer
ttccacctgcgacagaaagaaggcgttca	Protospacer
 ...*.**************** *****

41. spacer 3.12|683615|30|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to KX397372 (Erwinia phage vB_EamM_Phobos, complete genome) position: , mismatch: 8, identity: 0.733

caagcgtttacgcatttacgcatacaagtg	CRISPR spacer
aaatcgtttacgcatttacgcatgtgcctc	Protospacer
 ** *******************...  *

42. spacer 3.6|683220|30|NZ_CP045696|CRISPRCasFinder,CRT matches to NZ_CP039853 (Salinimonas sp. KX18D6 plasmid plas12, complete sequence) position: , mismatch: 9, identity: 0.7

ataaaattgtgcaaaaaagagggacgcaga	CRISPR spacer
ctataattgtccaaaaaagagggagttgag	Protospacer
 ** ****** *************  ....

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2160117 : 2169853

Lactococcus_phage(12.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_154327973.1\|2160117_2160720_+	DUF1071 domain-containing protein	A0A126H911	Lactococcus_phage	1.4e-47	61.0
WP_154327974.1\|2160723_2161791_+	hypothetical protein	NA	NA	NA	NA
WP_154327975.1\|2161828_2162665_+	hypothetical protein	A0A173G9H6	Propionibacterium_phage	1.4e-13	27.5
WP_154327976.1\|2162676_2163111_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	2.8e-18	39.8
WP_154327977.1\|2163112_2163370_+	demethylase	NA	NA	NA	NA
WP_154327978.1\|2163366_2163813_+	hypothetical protein	A0A2I7R7P2	Vibrio_phage	1.1e-09	39.6
WP_154327979.1\|2164226_2165435_+	ATP-dependent helicase	A0A2I2L6J1	Escherichia_phage	1.9e-43	36.3
WP_154327980.1\|2165431_2166025_+	hypothetical protein	Q8W6N9	Burkholderia_virus	5.4e-12	35.4
WP_154327981.1\|2166030_2166915_+	hypothetical protein	NA	NA	NA	NA
WP_154327982.1\|2166907_2167513_+	hypothetical protein	NA	NA	NA	NA
WP_154327983.1\|2167625_2168195_+	hypothetical protein	L0P6F5	Lactobacillus_phage	8.8e-36	40.9
WP_154327984.1\|2168221_2169853_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.1e-19	30.0

DBSCAN-SWA_2

2173705 : 2217918

Flavobacterium_phage(30.0%)

transposase,head,terminase,integrase,capsid,portal

attL 2171721:2171741|attR 2198711:2198731

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2171721:2171741	attL	NA	NA	NA	NA
WP_154327995.1\|2173705_2174839_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_154327996.1\|2174838_2175594_+	N-6 DNA methylase	NA	NA	NA	NA
WP_154327997.1\|2175610_2175862_+	hypothetical protein	NA	NA	NA	NA
WP_154327998.1\|2175858_2176089_+	hypothetical protein	NA	NA	NA	NA
WP_154327999.1\|2176108_2176408_+	hypothetical protein	NA	NA	NA	NA
WP_154328000.1\|2176397_2177204_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_154328001.1\|2177225_2177471_+	hypothetical protein	NA	NA	NA	NA
WP_154328002.1\|2177500_2177923_+	DUF4494 domain-containing protein	NA	NA	NA	NA
WP_154328003.1\|2177912_2178332_+	dUTP diphosphatase	I2GUG7	Acinetobacter_phage	2.0e-29	49.7
WP_154328004.1\|2178352_2178559_+	hypothetical protein	NA	NA	NA	NA
WP_154328005.1\|2178641_2178992_+	hypothetical protein	NA	NA	NA	NA
WP_154328006.1\|2179045_2179717_+	hypothetical protein	NA	NA	NA	NA
WP_154328007.1\|2179713_2180466_+	hypothetical protein	NA	NA	NA	NA
WP_154328008.1\|2180545_2181097_+	hypothetical protein	NA	NA	NA	NA
WP_154328009.1\|2181130_2181910_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_154328010.1\|2181979_2182129_+	hypothetical protein	NA	NA	NA	NA
WP_154328011.1\|2182271_2182547_+	hypothetical protein	NA	NA	NA	NA
WP_154328012.1\|2182546_2184559_+\|terminase	PBSX family phage terminase large subunit	A0A2I7RGD2	Vibrio_phage	8.3e-20	31.2
WP_154328013.1\|2184693_2185281_+	hypothetical protein	NA	NA	NA	NA
WP_154328014.1\|2185461_2186874_+\|portal	phage portal protein	NA	NA	NA	NA
WP_154328015.1\|2186827_2187880_+\|head	phage prohead protein	Q5ZGF7	Flavobacterium_phage	8.1e-27	39.1
WP_154328016.1\|2187899_2189498_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_154328017.1\|2189504_2189882_+	hypothetical protein	NA	NA	NA	NA
WP_154328018.1\|2189891_2190392_+	hypothetical protein	NA	NA	NA	NA
WP_154328019.1\|2190391_2190961_+	hypothetical protein	NA	NA	NA	NA
WP_154328020.1\|2190964_2191816_+	hypothetical protein	NA	NA	NA	NA
WP_154328021.1\|2192049_2192595_+	hypothetical protein	NA	NA	NA	NA
WP_154328022.1\|2192591_2192780_+	hypothetical protein	NA	NA	NA	NA
WP_154328023.1\|2192784_2197239_+	hypothetical protein	NA	NA	NA	NA
WP_154328024.1\|2197235_2197838_+	hypothetical protein	NA	NA	NA	NA
WP_154328025.1\|2197992_2198163_+	hypothetical protein	NA	NA	NA	NA
WP_154328026.1\|2198152_2198626_+	hypothetical protein	NA	NA	NA	NA
WP_154329023.1\|2198742_2199081_+	DUF2693 domain-containing protein	F5A3D3	Riemerella_phage	9.0e-12	40.6
2198711:2198731	attR	NA	NA	NA	NA
WP_154328027.1\|2199092_2199362_+	DUF3846 domain-containing protein	NA	NA	NA	NA
WP_154328028.1\|2199500_2201663_+	hypothetical protein	NA	NA	NA	NA
WP_154328029.1\|2201659_2202517_+	hypothetical protein	NA	NA	NA	NA
WP_154328030.1\|2202523_2203189_+	hypothetical protein	NA	NA	NA	NA
WP_154328031.1\|2203192_2203426_+	hypothetical protein	NA	NA	NA	NA
WP_154328032.1\|2203428_2204625_+	hypothetical protein	NA	NA	NA	NA
WP_154328033.1\|2204626_2206219_+	hypothetical protein	NA	NA	NA	NA
WP_154328034.1\|2206273_2206822_+	hypothetical protein	NA	NA	NA	NA
WP_154328035.1\|2206818_2207268_+	peptidase M15	H2A0C2	Bacteroides_phage	5.0e-26	50.0
WP_154328036.1\|2207272_2207755_+	hypothetical protein	NA	NA	NA	NA
WP_154328037.1\|2207969_2208908_+	hypothetical protein	NA	NA	NA	NA
WP_154328038.1\|2208962_2209349_+	hypothetical protein	NA	NA	NA	NA
WP_154328039.1\|2209345_2209555_+	helix-turn-helix domain-containing protein	A0A2I6UI15	Bacillus_phage	1.7e-05	40.0
WP_154328040.1\|2209838_2210111_+	hypothetical protein	NA	NA	NA	NA
WP_154328041.1\|2210107_2210425_+	hypothetical protein	A0A218M789	Flavobacterium_phage	3.7e-23	54.2
WP_154328042.1\|2210421_2210778_+	hypothetical protein	NA	NA	NA	NA
WP_154328043.1\|2210756_2211095_+	hypothetical protein	NA	NA	NA	NA
WP_154328044.1\|2211098_2211404_+	hypothetical protein	NA	NA	NA	NA
WP_154328045.1\|2211400_2211712_+	hypothetical protein	NA	NA	NA	NA
WP_154328046.1\|2211714_2212920_+	hypothetical protein	A0A1B0WMP3	Flavobacterium_phage	7.7e-106	50.0
WP_154328047.1\|2212916_2214185_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	1.7e-132	53.5
WP_154328048.1\|2214181_2214676_+	chromosome partitioning protein ParB	L0P6I1	Lactobacillus_phage	9.3e-66	74.8
WP_154328049.1\|2214672_2215302_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_154328050.1\|2215516_2216704_-	hypothetical protein	NA	NA	NA	NA
WP_154328051.1\|2217471_2217918_-\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP045696.1|WP_008653290.1|1166067_1166496_-|hypothetical-protein

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Acr_ID: NZ_CP045696.1|WP_154328036.1|2207272_2207755_+|hypothetical-protein

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Acr_ID: NZ_CP045696.1|WP_154328037.1|2207969_2208908_+|hypothetical-protein

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Acr_ID: NZ_CP045696.1|WP_154328038.1|2208962_2209349_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP045696.1|WP_008653290.1|1166067_1166496_-|hypothetical-protein

1166067_1166496_-

142 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.55	0.9859154929577465	0.9929078014184397

NZ_CP045696.1|WP_154328036.1|2207272_2207755_+|hypothetical-protein

2207272_2207755_+

160 aa aa

2173705-2217918

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP045696_3	TypeV-A	3.10\|683483\|30\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683483-683512	30	2213926-2213897	1

1. spacer 3.10|683483|30|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045696 position: 2213926-2213897, mismatch: 1

tcatcagagagacagccgccgcgctctttc	CRISPR spacer
tcatcagagagacagccgccgcgctctctc	Protospacer
***************************.**

NZ_CP045696.1|WP_154328037.1|2207969_2208908_+|hypothetical-protein

2207969_2208908_+

312 aa aa

2173705-2217918

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP045696_3	TypeV-A	3.10\|683483\|30\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683483-683512	30	2213926-2213897	1

1. spacer 3.10|683483|30|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045696 position: 2213926-2213897, mismatch: 1

tcatcagagagacagccgccgcgctctttc	CRISPR spacer
tcatcagagagacagccgccgcgctctctc	Protospacer
***************************.**

NZ_CP045696.1|WP_154328038.1|2208962_2209349_+|hypothetical-protein

2208962_2209349_+

128 aa aa

2173705-2217918

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP045696_3	TypeV-A	3.10\|683483\|30\|NZ_CP045696\|CRISPRCasFinder,CRT,PILER-CR	683483-683512	30	2213926-2213897	1

1. spacer 3.10|683483|30|NZ_CP045696|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045696 position: 2213926-2213897, mismatch: 1

tcatcagagagacagccgccgcgctctttc	CRISPR spacer
tcatcagagagacagccgccgcgctctctc	Protospacer
***************************.**

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045696

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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