CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045647	Staphylococcus epidermidis strain IRL01 plasmid pBPH0747-01, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP045648	Staphylococcus epidermidis strain IRL01 chromosome, complete genome	4 crisprs	csa3,WYL,DEDDh,cas3,DinG	1	1	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045648_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045648_1

482079-482162

Orphan

Consensus_repeat	Method
GAAATTCTACGGACAAGGCAAGTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045648_1

>merge|NZ_CP045648|1|482079-482162|CRISPRCasFinder
GAAATTCTACGGACAAGGCAAGTTGGGGTTCGGGGCCCCAACAAAGAGAATTTCACCGAGAAATTCCACGGACAAGGCAAGTTG

>NZ_CP045648|1|1|482079-482162|CRISPRCasFinder
GAAATTCTACGGACAAGGCAAGTTG	GGGTTCGGGGCCCCAACAAAGAGAATTTCACCGA
GAAATTCCACGGACAAGGCAAGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045648.1\|WP_002438145.1\|479771_479903_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_001831422.1\|476627_477437_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP045648.1\|WP_002504723.1\|478862_479525_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_CP045648.1\|WP_080009951.1\|487801_489598_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP045648.1\|WP_001831409.1\|474291_474447_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_126534841.1\|472883_474062_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_CP045648.1\|WP_002456688.1\|479902_481396_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143435
NZ_CP045648.1\|WP_001831616.1\|492686_493685_-\|thiazole-biosynthesis-adenylyltransferase-ThiF	unknown	unknown	gnl\|CDD\|274094
NZ_CP045648.1\|WP_001832881.1\|489826_491791_-\|fructose-1,6-bisphosphatase	unknown	unknown	gnl\|CDD\|226373
NZ_CP045648.1\|WP_001831461.1\|483722_484670_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_CP045648.1\|WP_002484424.1\|477623_478616_-\|D-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|183550
NZ_CP045648.1\|WP_001831463.1\|475012_475507_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP045648.1\|WP_001831599.1\|475672_476284_+\|class-A-sortase-SrtA	unknown	unknown	gnl\|CDD\|130148
NZ_CP045648.1\|WP_001831535.1\|483274_483556_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_CP045648.1\|WP_154435882.1\|482224_483013_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|225312
NZ_CP045648.1\|WP_100481749.1\|484740_486180_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143407
NZ_CP045648.1\|WP_002484437.1\|486413_487463_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226458
NZ_CP045648.1\|WP_001831584.1\|491964_492579_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP045648.1\|WP_002438161.1\|487544_487673_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_002438139.1\|474772_474949_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045648.1\|WP_001831422.1\|476627_477437_+\|HAD-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	2.03989e-48
NZ_CP045648.1\|WP_002504723.1\|478862_479525_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	7.15204e-76
NZ_CP045648.1\|WP_080009951.1\|487801_489598_+\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	1.45572e-43
NZ_CP045648.1\|WP_126534841.1\|472883_474062_+\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	3.09501e-19
NZ_CP045648.1\|WP_001831616.1\|492686_493685_-\|thiazole-biosynthesis-adenylyltransferase-ThiF	gnl\|CDD\|274094	TIGR02356, molybdopterin_biosynthesis_protein_moeB, thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	3.34753e-109
NZ_CP045648.1\|WP_001832881.1\|489826_491791_-\|fructose-1,6-bisphosphatase	gnl\|CDD\|226373	COG3855, Fbp, Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism].	0
NZ_CP045648.1\|WP_001831461.1\|483722_484670_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	1.52754e-112
NZ_CP045648.1\|WP_002484424.1\|477623_478616_-\|D-lactate-dehydrogenase	gnl\|CDD\|183550	PRK12480, PRK12480, D-lactate dehydrogenase; Provisional.	0
NZ_CP045648.1\|WP_001831463.1\|475012_475507_-\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	8.8583e-62
NZ_CP045648.1\|WP_001831599.1\|475672_476284_+\|class-A-sortase-SrtA	gnl\|CDD\|130148	TIGR01076, Uncharacterized_protein_YhcS, LPXTG-site transpeptidase (sortase) family protein. This family includes Staphylococcus aureus sortase, a transpeptidase that attaches surface proteins by the Thr of an LPXTG motif to the cell wall. It also includes a protein required for correct assembly of an LPXTG-containing fimbrial protein, a set of homologous proteins from Streptococcus pneumoniae, in which LPXTG proteins are common. However, related proteins are found in Bacillus subtilis and Methanobacterium thermoautotrophicum, in which LPXTG-mediated cell wall attachment is not known. [Cell envelope, Other, Protein fate, Protein and peptide secretion and trafficking].	1.43034e-42
NZ_CP045648.1\|WP_001831535.1\|483274_483556_-\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	1.79195e-31
NZ_CP045648.1\|WP_154435882.1\|482224_483013_-\|VOC-family-protein	gnl\|CDD\|225312	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only].	4.54909e-96
NZ_CP045648.1\|WP_100481749.1\|484740_486180_-\|aldehyde-dehydrogenase	gnl\|CDD\|143407	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.	0
NZ_CP045648.1\|WP_002484437.1\|486413_487463_-\|membrane-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	9.57735e-87
NZ_CP045648.1\|WP_001831584.1\|491964_492579_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.68558e-44
NZ_CP045648.1\|WP_002456688.1\|479902_481396_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143435	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.	0

>NZ_CP045648.1|WP_002456688.1|479902_481396_+|aldehyde-dehydrogenase-family-protein
MTNINVRNYIDESYGLFINNEFQASDSGETLTVSNPANGEDLAKVARAGKKDVDKAVQAAHDAFDSWSKISKEERADYLLEISRRIHEKTEHLATVESLQNGKPYRETSTIDVPQAANQFKYFASVLTTDEGSVNEIDQNTMSLVVNEPVGVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKIFQEVLPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAERIVPTTLELGGKSANIIFDDANLEQVIEGVQLGILFNQGEVCSAGSRLLVQSSIYNELLPKLKEAFENIKVGDPFDEDTKMSAQTGPEQLDKIESYIKIAEEDDKANILTGGHRITDNGLDKGYFFEPTIIEINDNKHQLAQEEIFGPVVVVEKFDDEQEAIEIANDSEYGLAGGIFTTDIHRALNVAKAMRTGRIWINTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFIDTSNQTKGLY
>NZ_CP045648.1|WP_002438145.1|479771_479903_+|hypothetical-protein
MMMQTDNFALFTKEVKIGITLSKRLHFIRDKRLLQISLKKDGF
>NZ_CP045648.1|WP_002504723.1|478862_479525_+|NAD(P)H-dependent-oxidoreductase
MNQMNQTIIDAFHFRHTTKEFDPTKKISDEDFNTILETGRLSPSSLGLEPWHFVVVQNKELREKLKAYSWGAQKQLDTASHFVLIFARKNVTAHTDYVQHLLRGVKKYEESTIPAVENKFDDFQESFHIADNERTLYDWASKQTYIALANMMTSAALLGIDSCPIEGFDLDKVTEILSDEGVLDTEQFGISVMVGFGYRAQEPKHGKVRQNEDDIISWIE
>NZ_CP045648.1|WP_002484424.1|477623_478616_-|D-lactate-dehydrogenase
MTKIMFFGTRAYEKDMALRWGKKNNIDVTTSKELLSVDTVDQLKDYDGVTTMQFGKLESEVYPKLESYGIKQIAQRTAGFDMYDLELAKKHGIIISNIPSYSPETIAEYSVSIALQLVRKFPTIEKRVQAHNFTWASPIMSRPVKNMTVAIIGTGRIGAATGKIYAGFGAKVVGYDAYPNHSLSFLEYKETVEDAIKDADIISLHVPANKDSFHLFDNNMFKKVKKGAVLVNAARGAVINTPDLIEAVNNGTLSGAAIDTYENEANYFTFDWSNQTIEDPILLELIRNENILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCDTRLN
>NZ_CP045648.1|WP_001831422.1|476627_477437_+|HAD-family-hydrolase
MIKAIAVDMDGTFLDTNKQFDRNRFETIFKELIDKNIKFVAASGNQFAKLKSIFGDREMFFISENGAVIYKGNQLYNYRSFDQYIFQKVVNYLNLNQKINNLIICGVKSAYILKETSEAFKQDARTYYHQLIEIDSLQTLPDDDYVKIAFNINRQTHPDLDEKLALKFKEDIKLVSSGRDSIDVIMPNMTKGQALSRLLKEWQMPASHLMAFGDANNDKDMLELAEHSYVMANSEDKSLFNIARHVAPSNDEQGVLSTIENVVLGYSNK
>NZ_CP045648.1|WP_001831599.1|475672_476284_+|class-A-sortase-SrtA
MKQWMNRLITLIGVLLIILAIYLFSKPYIDNYLHEKDNDHKIENYDKKEKEQTKTSKSTPKIPSDKSKMAGYIEVPDAQIKEPVYPGPATPEQLNRGVSFAEGDESLNQQNISIAGHTFTDRSHYQFTNLKSAKIGSKVYFKTGNQTRKYKITKIRDVKPTEVKVLDEHPNKKNQLTLITCDDYNEETGVWETRKIFIATQIN
>NZ_CP045648.1|WP_001831463.1|475012_475507_-|N-acetyltransferase
MIRFARLEDLQDILTIYNDAILNTTAVYTYKPQQLDERLQWYQSKAKINEPIWVYEKEGKVVGFATYGSFRQWPAYLYTIEHSIYVHQQYRGLGIASQLLENLIRYAKEQSYRTIVAGIDASNMDSIALHKKFDFSHAGTIKNVGYKFGRWLDLSFYQYDLSDS
>NZ_CP045648.1|WP_002438139.1|474772_474949_+|hypothetical-protein
MLRLFLIFIAFIINTTITYLWTIEGTWPNLLFKSLSLSMIIVFMFYYIRFVIENKKED
>NZ_CP045648.1|WP_001831409.1|474291_474447_-|hypothetical-protein
MYKEYNMTQHTLPMESSVLIPTNNISRHVNDIAETIPDTEFDEFRHYRGLI
>NZ_CP045648.1|WP_126534841.1|472883_474062_+|IS110-family-transposase
MSKRSSVVAHYKNGKFQKEFFIQNNKNGYNYLLKYLNDLHHPQLIFESTGIYSRGMERFCCVNQINYIQMNPLEAKFKTSALRSWKTDQADAHKLACLGPTLKQTGNLPIHELIFFELRERVRFHLEIENEQNRLKFQILELLHQTFPGLERLFSSRYSIIALNIAEIFTHPDMVLDIDKDVLITHIFNSTDKGMSMDKATKYALQLRVIAQESYPNVDRHSFLVEKLRLLIQQLKQSIHHLKQLDDAMIQLAQQLDYFENIHSIPGIGKLSTAMIIGEIGDIKRFKSNKQLNTFVGIDIKRYQSGHTHCRDTINKRGNKKARKLLFWVIMNIIRGQHHYDNHVVDYYYKLRKQPNEKPHKTAIIACINRLLKTIHYLVMNHKLYDYQMSPH
>NZ_CP045648.1|WP_154435882.1|482224_483013_-|VOC-family-protein
MTNFHSIDATQVTNVTLNVKDLNKSTDFYSNVLGFSIEKQTNQQTVFNIGNLGYTLTLNELNNGRQPEFREAGLFHVAYLLPTRSDLADFLYHANNLNIAMGGGDHLVSEALYFTDPEGNGIEVYHDRPSEDWVWRDGFVKMDTLEVNVNDLMAQRSNEGWPEEGKIGHLHLKTHNLESAYEFYVEKLGFEHISNFPQALFMSTQKYHHYIATNTWQSNKIRTQNEQTYGLCHFDIYQPNANTTHVTSPEGFDITIHGNETK
>NZ_CP045648.1|WP_001831535.1|483274_483556_-|N-acetyltransferase
MAAEIKQGDHKFYVGNDENNPKAVITFKEVDNNEIDIDHTGVSDELGGQGLGKKLVNRVVEHARENNLKIIASCPFAKNVLEKDDHAQDVYLG
>NZ_CP045648.1|WP_001831461.1|483722_484670_+|ABC-transporter-substrate-binding-protein
MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDAQSIYPAGADLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKITNSMTNNSMKLALAEGLKQSDFIHSKDHDENHEHHSHHEESNQDPHVWLDPVLNQKFAFMIKEKLIEKDPKHQAYYNKNYKIVNKDIVHIDQQLQSITKHYKRDKVVISHDSLGYLAHRYGFKEQGVKGMNDEEPSQKEILNIVKDIQHSHAPYVLYEQNITSKITDVIKKETDTKPLSFHNLAVLTKEEQNDDSISYQSLMKKNIYVLNRALNN
>NZ_CP045648.1|WP_100481749.1|484740_486180_-|aldehyde-dehydrogenase
MEVFNMTNQLFINNEFIESQSKETMDVINPATGEAFDTITLATEEEVNDAIEKSQQAQLEWERVPQPTRAEHVKLLIPLLEKNRDQIAQLYVKEQGKTLAQAYGEIDKSISFIDYMTSLSMSDKGRVLQNSIANETIQIINKPIGVTAGIVPWNAPILVLMRKVIPAIVTGCSVVIKPSEETTLLTLRLAELFRASTIPAGLIQIVPGTGETVGTQLASHKDIQLISLTGSMRAGKSVYENAAQTVKKVNLELGGNAPVIVTSNADLDKAVNYIVTARINNAGQVCTCPERIFVHEDVHDDFLNKVTSKMKSLTVGDPFDENTDYGAIINQKQLDSIHEKVQDAIKNGATLMTGGHQLKRHGFFYAPTVLDNVRKDYNVFKDEIFGPVLAITTYRDFEQVIEDANDTNAGLSSYIFSENLTEVMTATERLKFGEVYANCEAEEVVNGYHAGWRESGLDGADGIHGFEEYYNTTVSYIRY
>NZ_CP045648.1|WP_002484437.1|486413_487463_-|membrane-protein
MSNVKESIIVAFAFVGVVVGAGFATGQEIFQFFTSHGIYSIGGIFITGLIITLGGIFVLNTGFRLRSQNHSESIRYYLHPTIAKLFDIILTVFLFSLAIIMTAGGASTINESFGLPFWLSSLILVILILLTLFLKFDRLIAVLGGVTPFLVAVVVMIAVYYFITGDLNFSDVSQYSNQNKSISPGWWFDAINYASLQIAAAFSFLTVMGGKLRYQSSTIYGGLIGGIIVTLLLLLINFGLVTEFNQIKEVALPSLLLAKQISPSIGIIMSVIMVLVIYNTVVGLMYAFASRFSRPFTKRYYILIVMMAIITFACTFVGFISLIGKVFPIMGLFGFILLIPVIYKGILRK
>NZ_CP045648.1|WP_002438161.1|487544_487673_-|hypothetical-protein
MALDYTHLSAILFNHTTLKRAPYLYNSTYVANFTVYFFGKII
>NZ_CP045648.1|WP_080009951.1|487801_489598_+|sodium:proton-antiporter
MFNMSLELPVMLTIVLFLALGIFSQWLASRIKWPSIVVMAIVGLLVGPIFGLANPKEALGPEAFSSIVSLAVAIILFEGSSNLDFRELKGISKAVIRIITIGAGIAWILGAIALHVTMNFPLSISFVIGGLFLITGPTVIQPLLKQAKVKRNVDSVLRWESIILDPIGPIIALTAFYVFQIFEEGIGFVVIILFILKLLAAILIGFGAAFLFNWLIGQDKIPQSLMPPIQFVFILLTFSICDEILSESGLLAVTIFGLMMARKKRHDLIFKESDHFIDNASSILVSTVFILITSSLTKDVLLNVLSWQLILFSLVMIVLVRPISVLLSTLGTEITKKERAVVALMAPRGIVVLTVAQFFSSLFMDDKIPMAQYITPVTFGLVFITVVIYGFGFTPLSKLFGVASTEPPGVIIVGESEFSFHLGINLRDHGIPVMMFNLFENTSEKAHEAGFEVFKGNLLSSNDRIYSDLLRYNKCILMTQSFIFNSLAFNELVPEFGLNNVDMMPVSFNDEQARNNLNGPIRNHILFDENHTPRWFNQFITQHNIVEVPAEDYEKITENDMLIYHINEDKEVTFKRSNRDIPEHETGVYGILKNAYLT
>NZ_CP045648.1|WP_001832881.1|489826_491791_-|fructose-1,6-bisphosphatase
MTHITESEMKQKYLDLLSQKFDSAEKLATEIINLESILELPKGTEHFVSDLHGEYESFQHVLRNGSGNVRAKINDIFKDKLSQQEINDLAALVYYPEEKLKLVKNNFDSIGTLNIWYITTIQRLIDLITYCSSKYTRSKLRKALPEQYVYIIEELLYKSNEFHNKKPYYETLVNQIIELEQSDDLIIGLSYTVQRLVVDHLHVVGDIYDRGPKPDKIMDTLINYHSVDIQWGNHDVLWIGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPLLTLAEKYYDAENPAFKPKKRPDKDVSLTKREESQITKIHQAIAMIQFKLEMPIIKRRPSFEMEERLVLEKIDYDNNEITIYNKTYPLKDTCFQTVNPNNPAELLAEEKEVMDKLLLSFQQSEKLRRHMSFLMRKGKLYLPYNGNLLIHGCIPVDENGEMESFEIEGERLSGRELLDVFEYHVRKAFDHKESTEDISTDLVWYLWTGKYSSLFGKRAMTTFERYFIEDKASHKEEKNPYYYLREDVDMIRKMLKDFGLNPDEGRIINGHTPVKEIDGEDPIKANGKMLVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVAHKEFNRKEKVLSMGADELSVKRVVDEELQRKKIRDTNIGKQLQDQIDILKILMHDRYLT
>NZ_CP045648.1|WP_001831584.1|491964_492579_-|DedA-family-protein
MEQIITDFISKWGYTAIFILILLENVLPVVPSEIILTFAGLLSVKSHLSIWTLLIIATIASFIGLLILYYICRLISEEKLYRFVDRHGKWMKLKSKDLKRANDWFKKYGAWAVFLCRFVPVLRVLITIPAGINRMNVIQFTTLSLIGTTIWNFALILLGRLLSDSFDALMNGIHTYSRIMYVIIIIAVIYFVIRYLMKRRRSVK
>NZ_CP045648.1|WP_001831616.1|492686_493685_-|thiazole-biosynthesis-adenylyltransferase-ThiF
MSRYERQTRFAPFGEEGQQKLSSSQILIFGAGALGSHIVDQLARMGAHHIAIVDMDIVEISNLHRQTLFDEEDAHTLISKVEAIKHKVNQININVNLTTYDLEVTSSNIENLIKNVEPDIIIDGMDNFKIRYLINEVCHKYQIPWVYGAAVGSKGSVYGIDHQGPCLKCLLQTIPDTGESCAINGVIPPVISMIASYEVAEAVRYLSGKGFSKQLITIDAFNINYKSMNVDALKNKDCPVCEKHEYTLLESQQERTIEDLCGNAYLFRFPPKAFKHAAHFPGNMVKSTSFAKLIQYQTYEFTLFKDGRMNAYGIHNDEEAHHLYNTLLKSIR

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Crispr_ID: NZ_CP045648_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045648_2

1901030-1901122

Unclear

Consensus_repeat	Method
TTATACATGAACCTCAAGCTCATGTGTTC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP045648_2

>merge|NZ_CP045648|2|1901030-1901122|CRISPRCasFinder
TTATACATGAACCTCAAGCTCATGTGTTCCTCTTTTCACTTAATAAATAGGTATTTAGTGTTTCTTATACATGAGCCTCAAGCTCATGTGTTC

>NZ_CP045648|2|2|1901030-1901122|CRISPRCasFinder
TTATACATGAACCTCAAGCTCATGTGTTC	CTCTTTTCACTTAATAAATAGGTATTTAGTGTTTC
TTATACATGAGCCTCAAGCTCATGTGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045648.1\|WP_002436293.1\|1890771_1891122_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP045648.1\|WP_002469385.1\|1901868_1902795_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP045648.1\|WP_001829466.1\|1891227_1891965_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP045648.1\|WP_001832559.1\|1891964_1892468_-\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP045648.1\|WP_001830113.1\|1893177_1894545_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP045648.1\|WP_002484841.1\|1896132_1899702_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_CP045648.1\|WP_002456579.1\|1904494_1906543_-\|ATP-dependent-DNA-helicase-RecG	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP045648.1\|WP_002439483.1\|1892594_1892870_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP045648.1\|WP_002456573.1\|1894909_1896136_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP045648.1\|WP_001830184.1\|1900680_1900914_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP045648.1\|WP_001830107.1\|1909151_1909340_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP045648.1\|WP_001830173.1\|1910062_1910707_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_CP045648.1\|WP_002456580.1\|1906746_1908405_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_CP045648.1\|WP_002457379.1\|1894575_1894908_-\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP045648.1\|WP_002456578.1\|1903775_1904387_-\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP045648.1\|WP_001830164.1\|1909422_1910058_-\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|273588
NZ_CP045648.1\|WP_002456575.1\|1899828_1900566_-\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP045648.1\|WP_002469384.1\|1902796_1903774_-\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP045648.1\|WP_001830156.1\|1908419_1908794_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP045648.1\|WP_001830161.1\|1901141_1901876_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500

Protein	Function_ID	Function_description	E-value
NZ_CP045648.1\|WP_002436293.1\|1890771_1891122_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_CP045648.1\|WP_002469385.1\|1901868_1902795_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.85618e-127
NZ_CP045648.1\|WP_001829466.1\|1891227_1891965_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	7.08021e-168
NZ_CP045648.1\|WP_001832559.1\|1891964_1892468_-\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.61565e-69
NZ_CP045648.1\|WP_001830113.1\|1893177_1894545_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP045648.1\|WP_002484841.1\|1896132_1899702_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_CP045648.1\|WP_002456579.1\|1904494_1906543_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP045648.1\|WP_002439483.1\|1892594_1892870_-\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_CP045648.1\|WP_002456573.1\|1894909_1896136_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP045648.1\|WP_001830184.1\|1900680_1900914_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_CP045648.1\|WP_001830107.1\|1909151_1909340_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_CP045648.1\|WP_001830173.1\|1910062_1910707_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	3.21388e-115
NZ_CP045648.1\|WP_002456580.1\|1906746_1908405_-\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_CP045648.1\|WP_002457379.1\|1894575_1894908_-\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.69203e-43
NZ_CP045648.1\|WP_002456578.1\|1903775_1904387_-\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	3.16807e-98
NZ_CP045648.1\|WP_001830164.1\|1909422_1910058_-\|thiamine-diphosphokinase	gnl\|CDD\|273588	TIGR01378, Thiamine_pyrophosphokinase, thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	5.23977e-73
NZ_CP045648.1\|WP_002456575.1\|1899828_1900566_-\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.98269e-117
NZ_CP045648.1\|WP_002469384.1\|1902796_1903774_-\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	1.20323e-175
NZ_CP045648.1\|WP_001830156.1\|1908419_1908794_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	1.7844e-34
NZ_CP045648.1\|WP_001830161.1\|1901141_1901876_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.64489e-139

>NZ_CP045648.1|WP_001830184.1|1900680_1900914_-|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_CP045648.1|WP_002456575.1|1899828_1900566_-|ribonuclease-III
MANQKKKEMVHDFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEYVHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL
>NZ_CP045648.1|WP_002484841.1|1896132_1899702_-|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNFAEVKLKLDNHSQKLQIDSEELVVTRRLYRSGESEYYLNNDRARLKDIIDLFLDSGLGKEAFSIISQGRVDEILNAKPINRRQIIEESAGVLKYKKRKAESIQKLDHTEDNLNRVEDILYDLEGRVEPLKEEAAIAKEYKQLSKEMEQSDVIVTVSDIDHYTEDNQRLDERLNHLKSQQAEKEGQQAQINQLLQKYKGKRQQNDYDIEKLNYELVKATENYEQLSGKLNVLEERKKNQSETNARYEEELDNLESQIDSIKNEKAQNEKLLADLKNKQKQLNKEVQELESLLYISDEQHDEKLEEIKNSYYTLMSEQSVVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKDIQQNITQTQKEYQSSKKSMEKVEQNIQQLEQQLTDSKRLLSEYENKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKDKELRGIHGAVAEVINVPSEMTQAIETALGASLQHVIVDNEKDGRQAIQYLKQRGLGRATFLPLNVIQPRHVAADIKDVARGSQGFINIASDAINVSAKYQNIIENLLGNTIIVENLKHANELARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRNQLEDYQRQTAEFERQFKEQKTQAEQLSEQYFSASQQYNNLKEQVHHHELELDRLKTQEAHLKNEHEEFEFEKNDGYQSDKSKETLKEKQNHLIEIQQQLKQLESDIERYTQLSKEGKASTHQTQQQLHQKQSDLAVVKERIKSQKQVYERLDKQLSDSERQKIEVNEKIKLFNSDEMMGKDAFEKLKEQIQQQENVRQNLNQQLSEIKQQRKDLNEKIEINESQLQKCHQDILFIENHYQDIKAKQSKLDVLINHAIDHLNDTYQLTVERARMEYDSDETIDNLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIIHEMDKEVEGRFKTTFHAVQDHFTTVFKQLFGGGQAELRLTEDDYLSAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSTETQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_CP045648.1|WP_002456573.1|1894909_1896136_-|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSSKSEDDIQKDLDETVDSNANSDSDSMDPNDSDEQVKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDDYSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLNVWGERVGVEVVSQNEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVINRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKMDDLQPFNPESYVYGLFADMIEQNEDIPEEISRNSSVESEEGN
>NZ_CP045648.1|WP_002457379.1|1894575_1894908_-|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQKNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLRLYQRFEKRRELYNLMKQSLNQPELLKQYITQLEELE
>NZ_CP045648.1|WP_001830113.1|1893177_1894545_-|signal-recognition-particle-protein
MAFEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_CP045648.1|WP_002439483.1|1892594_1892870_-|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_CP045648.1|WP_001832559.1|1891964_1892468_-|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
>NZ_CP045648.1|WP_001829466.1|1891227_1891965_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKGIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINHNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSDGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND
>NZ_CP045648.1|WP_002436293.1|1890771_1891122_-|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR
>NZ_CP045648.1|WP_001830161.1|1901141_1901876_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP045648.1|WP_002469385.1|1901868_1902795_-|ACP-S-malonyltransferase
MGKIAVVFPGQGAQKVGMASDLYNEEERSTRVLNLAQETVDFDLLETMFTDNDGKLGETENTQPALLTHSVALLESLNHLKVDYTMGHSLGEYSSLVSSGVLSFEDAVRIVRKRGQLMAQAFPNGVGGMAAVLGLDYDDVDKICQTLSTKEQLIEPANINSPGQIVVSGHKSLIDELVEKGKELGAKRVLPLAVSGPFHSSMMKVIEEDFANFINQFEWHNANYPVVQNVNAKGETDAEVIKRNMVKQLYSPVQFIQSTEWLINQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNNHE
>NZ_CP045648.1|WP_002469384.1|1902796_1903774_-|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDESQYNLSHERIEFRHCTEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGIQNPSVSLLNIGTEAAKGNSLTKKAYDLFEKNQSFNFTGNIEAKTLMDGNVDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMSSFKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIRQAKIAGEENIVQIMKDTVGE
>NZ_CP045648.1|WP_002456578.1|1903775_1904387_-|transcription-factor-FapR
MIFKEYLRLGTKMRGERLKLKKNDRRVAIKEAIELNPFITDYELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGRIKSIEANEIIGDLIQVNPDVSAQSLIEITIDSVFAKSEIARGHVLFAQANSLCVALIHKPIVLTHESQVEFKEKVKLNDTVRADARVIDITDKHYIIEVNSYVSDMLVFKGKFKMYYTSEDE
>NZ_CP045648.1|WP_002456579.1|1904494_1906543_-|ATP-dependent-DNA-helicase-RecG
MSKVHLIESPYALDKIKGIGPKRLALLEELNIKSVEDLVLYLPTRYEDNTVIDLNQADDQATVTVQGEVYSSPTVAFFGRNKSKLTVHLMINHIAVKCVFFNQPYLKKKLELNSIVTIKGKWNRNKQEINGNRIFFKDQKNQEDTHLEPIYRIKEGIKQKQLRDNIRQALSDVTIHEWLTDDLREKYKLETLAYTIQTLHHPINKQNLLRARRTYAFTELFMFELRMQWLNRLEKTSDEAIEINYDINKVKQFIDSLPFELTDAQKVSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIQLFGNTMNVALLTGSVKGKKRRLLLEQLENGTIDCLIGTHALIQDDVVFNNVGLVITDEQHRFGVNQRQILREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQYDQVLAQMSNELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQSDYGNEKVGLLHGKMSAEDKDQVMQKFSEHEIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANVVEDYRMLEVARDEAAELIQSGQFFEQQYSHLREFIKQNLRHIRFD
>NZ_CP045648.1|WP_002456580.1|1906746_1908405_-|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEEEKEISVQQFAESFQAGVETAYKAVMKPVEGTILTVAKDAAKAAMDYVDQAEDCVDLMAHLIEAASESLDNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKIEAQAPKLDTESFVNDDHDFHGVINTEDIVYGYCTEMMVRFGKNKKAFDEQEFRNDMSEFGDSLLVINDDEIVKVHVHTEHPGDVFNYGQKYGELIKLKVENMREQHREVIRKEQDGLQSKEANESKTVETAIVTISVGDGIAELFKSMGATHIISGGQTMNPSTEDIVKVIEQSQCKRAIILPNNKNIMMASEQAASIVEAETVVIPTKSIPQGISALFQYDLESSLEDNKRHMSDALETVQSGSITFAVRDTKIDGIEIKKDEFMGLAEDKIVTSDVNQFHAVKGLLSKLLNEDSEILTMISGEDADNSITNQIINWIESEYPDVEVEQHEGGQPIYQYFFAVE
>NZ_CP045648.1|WP_001830156.1|1908419_1908794_-|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNDVIASVVGGKAVESYGIVGMASRQQVRDGIAEILGHDNYAKGIKVREDNGIIDVDMYIIVSYGVKISEVASNLQSTVKYTLEKTLNVKVNSINIFVQGVRVNETVKKV
>NZ_CP045648.1|WP_001830107.1|1909151_1909340_+|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNHRSHALNANKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_CP045648.1|WP_001830164.1|1909422_1910058_-|thiamine-diphosphokinase
MKINLLCSQRLLPNHIFEKEKDSNWAGIDRGALILVKQGIQPIFSVGDFDSVNNEERLMLMKNLQIEPVEAEKDDTDLALGVAQAVERGYTEITIYGATGGRLDHFMGVLQILQKPQYLHQSIKIKVIDQQNHIQLLNEGKYVINRDSTYPYISFIPLNDKTILTLQGFKYNLNQEHLNLGSTLTISNEVKVNEAIIRVEQGTVLKIRSRD
>NZ_CP045648.1|WP_001830173.1|1910062_1910707_-|ribulose-phosphate-3-epimerase
MVKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLPIDVHLMIEQPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVETILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQTSKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE

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Crispr_ID: NZ_CP045648_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045648_3

2256071-2256166

Orphan

Consensus_repeat	Method
CACTGCAATTTTTAATTGCTTGTGTCACTTATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045648_3

>merge|NZ_CP045648|3|2256071-2256166|CRISPRCasFinder
CACTGCAATTTTTAATTGCTTGTGTCACTTATGCTTGAGCTTTGCTCAGGCGTTCCTCTTTTTCACTGCAATTTTTAATTGCTAGTGTCACTTATG

>NZ_CP045648|3|3|2256071-2256166|CRISPRCasFinder
CACTGCAATTTTTAATTGCTTGTGTCACTTATG	CTTGAGCTTTGCTCAGGCGTTCCTCTTTTT
CACTGCAATTTTTAATTGCTAGTGTCACTTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045648.1\|WP_001831936.1\|2255316_2255613_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP045648.1\|WP_001831974.1\|2258430_2259147_-\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_CP045648.1\|WP_001831939.1\|2250797_2251658_+\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_CP045648.1\|WP_011082628.1\|2261425_2262031_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP045648.1\|WP_001831968.1\|2255605_2255992_-\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
NZ_CP045648.1\|WP_001831910.1\|2253350_2254046_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP045648.1\|WP_001831965.1\|2256805_2257159_-\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP045648.1\|WP_001831893.1\|2252089_2252248_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_001829623.1\|2260654_2261155_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_CP045648.1\|WP_002438990.1\|2252517_2253330_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP045648.1\|WP_002438979.1\|2256251_2256632_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP045648.1\|WP_001831981.1\|2257807_2258350_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_CP045648.1\|WP_002457221.1\|2259307_2259730_+\|Organic-hydroperoxide-resistance-protein-like-1	unknown	unknown	gnl\|CDD\|274649
NZ_CP045648.1\|WP_002438972.1\|2260443_2260572_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_001831944.1\|2249714_2250476_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP045648.1\|WP_001829648.1\|2259913_2260069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_001831967.1\|2251723_2251915_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_CP045648.1\|WP_001831898.1\|2248312_2249620_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP045648.1\|WP_002484545.1\|2254038_2255064_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP045648.1\|WP_001831907.1\|2257301_2257625_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245

Protein	Function_ID	Function_description	E-value
NZ_CP045648.1\|WP_001831936.1\|2255316_2255613_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.51609e-11
NZ_CP045648.1\|WP_001831974.1\|2258430_2259147_-\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	1.58421e-151
NZ_CP045648.1\|WP_001831939.1\|2250797_2251658_+\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	5.03423e-64
NZ_CP045648.1\|WP_011082628.1\|2261425_2262031_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.78585e-50
NZ_CP045648.1\|WP_001831968.1\|2255605_2255992_-\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	1.04994e-30
NZ_CP045648.1\|WP_001831910.1\|2253350_2254046_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	8.39327e-99
NZ_CP045648.1\|WP_001831965.1\|2256805_2257159_-\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.66742e-56
NZ_CP045648.1\|WP_001829623.1\|2260654_2261155_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	1.80445e-49
NZ_CP045648.1\|WP_002438990.1\|2252517_2253330_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	1.91141e-110
NZ_CP045648.1\|WP_002438979.1\|2256251_2256632_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	1.44293e-69
NZ_CP045648.1\|WP_001831981.1\|2257807_2258350_-\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	7.82596e-53
NZ_CP045648.1\|WP_002457221.1\|2259307_2259730_+\|Organic-hydroperoxide-resistance-protein-like-1	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	2.58332e-60
NZ_CP045648.1\|WP_001831944.1\|2249714_2250476_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.04582e-150
NZ_CP045648.1\|WP_001831967.1\|2251723_2251915_-\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	0.000312009
NZ_CP045648.1\|WP_001831898.1\|2248312_2249620_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	4.59041e-133
NZ_CP045648.1\|WP_002484545.1\|2254038_2255064_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.2337e-166
NZ_CP045648.1\|WP_001831907.1\|2257301_2257625_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.68543e-25

>NZ_CP045648.1|WP_001831968.1|2255605_2255992_-|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPANIICTHGTMSIDKIDNMIETLYDKQVYVLADSDDEGEKIRKWFKRYLSESEHIYVDKTFCEVAKCPKNYLAHVLSRYGFNVKKEKKLMNNLKTERLVLVNE
>NZ_CP045648.1|WP_001831936.1|2255316_2255613_-|thioredoxin-family-protein
MNKLKDIEDITVNFNKEKHLIFGYTPMCGTCKISERMLDIANEILQLPIKKIDLNFYPEWSKEKQIMSVPVLLLMRREEEIKRIYAFQSVTYLLENLK
>NZ_CP045648.1|WP_002484545.1|2254038_2255064_-|methionine-ABC-transporter-ATP-binding-protein
MIKLNQIVKRYHTKDKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLESPTSGEIIIDGNNISQLSKSQLRKKRQKVSMIFQHFNLLWSRSVLKNVTFPLEIAGVPSGLAKQKALELIELVGLKGRESAYPSELSGGQKQRVGIARALANDPDVLLCDEATSALDPQTTDEILDLLLKVREQQNLTIVLITHEMHVIRRICDEVAVMENGKVIEQGAVSKVFENPQHEVTKRFVKDDLNDDFEDSLEYLEPLDHDAYIVRLNFTGENTTEPIISYMTKTHNIDVNILEADIKNTKNGSLGFLVIHIPHISEEHFKQFKHNLHEQHVNVEVLKHG
>NZ_CP045648.1|WP_001831910.1|2253350_2254046_-|ABC-transporter-permease
MGKSYGEIFHEMVTMPNVQWPEVWQAILETLYMTVVSTLFAFVFGLILGVLLFLSAKSNSLAAKIFYTIVSFIVNLFRAIPFIILILLLIPFTSILLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTSIVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFLGDWLTNKIDKR
>NZ_CP045648.1|WP_002438990.1|2252517_2253330_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIKPINDYTTPNKLLDKGEIDANFFQHTPYLNTESKEKGYKIESAGNVELEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKLKKGVKIENAKFDDITENKKDIKFNNKQSAEYLPKIYQNQDADAVIINSNYAIDQKLSPKKDSIALESPKDNPYANLIAVKKGHKDDKNIKVLMEVLQSKEIQDYIKDKYDGAVVPAK
>NZ_CP045648.1|WP_001831893.1|2252089_2252248_+|hypothetical-protein
MKFITIKAITEKGLDKKVNQFLKSHPQIEIIKFDYQMGYSGVSVGILYRDNI
>NZ_CP045648.1|WP_001831967.1|2251723_2251915_-|CsbD-family-protein
MAEDKFEQAKGNIKETVGNATDNKELEKDGKGDKASGKAKEAVENVKEKANDVIDKFKGNKGD
>NZ_CP045648.1|WP_001831939.1|2250797_2251658_+|DUF368-domain-containing-protein
MKKFKWINIFKGFGMGTSDLVPGVSGGTIALLLGIYDDFISSISGLFSRRFWPSLKFLLPILVGMLIAIGLLSQLFNYLLSQHHIPTMLFFTGLILGIIPYLLTISNFKKNFSIIHYFILLLGIAIIVVFALLNHGDKHSGETLTLSFSLIIKYFIAGVFASSAMLLPGISGSFMLLVFGVYGTLMYAISELLHFNLNALPIILIVGFGIVTGFMISSRLIQYCLHQHPTMTFALIIGFVIGSLYAVFPGFPKDLIQWIISFFLLITGFLVSYVLGKITAKNEASF
>NZ_CP045648.1|WP_001831944.1|2249714_2250476_-|Fe-S-cluster-assembly-ATPase-SufC
MSSTLEIKDLHVSIEDKEILKGVNLTINTGEIHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELDVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGEEFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGAAE
>NZ_CP045648.1|WP_001831898.1|2248312_2249620_-|Fe-S-cluster-assembly-protein-SufD
MTTKTLNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQHHTTGDAYTQLTDLPKSVKEIIDVENSENLIIQHNNELAYTQVSDQAKHDGVIIEGLSEALVNHSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGFTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDDVKRQLREVIERKVSK
>NZ_CP045648.1|WP_002438979.1|2256251_2256632_-|glycine-cleavage-system-protein-GcvH
MAVPSEFKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE
>NZ_CP045648.1|WP_001831965.1|2256805_2257159_-|arsenate-reductase-family-protein
MIKFYQYPKCTTCKKAAKFLDEHDVNYESIDIVQHTPTKKEFKNIVDKTGVNINKLFNTHGIKYRELNLKEKLKNMSDDEKLELLASDGMLVKRPLAISGNHLTLGFKENEYQHQWL
>NZ_CP045648.1|WP_001831907.1|2257301_2257625_+|thioredoxin-family-protein
MKNIHQTEEFNSTIGSTDPVIIKFEADWCPDCKAMDMWIDPIVEKYNNYQWYVVDRDELEDVTTENDVMGIPSILIFQNGKKLAHLHSANAKSPEQVESFLTEHLDQ
>NZ_CP045648.1|WP_001831981.1|2257807_2258350_-|nitroreductase
MELQEAISNRRSVKKFKHDMVVDDQTVYDAIYKATDAPNHGMREPWRLVHISKDKLGDFSRDITRFAFPDSPDKREDHFHAVTNLGGMLLLILKDDPRQRQSRENYFAFGAFAQNLMLLLYEAGIGTCWKSPQYIFDPKIRKALGVKDNEILAGFLYLTDLEEVPTKAKRKNKNLITEFE
>NZ_CP045648.1|WP_001831974.1|2258430_2259147_-|type-I-3-dehydroquinate-dehydratase
MTHVDIAATIAPEDKLSKTLLKDIKVNEESIDIIELRIDQWPSFNKALLNEVIKQLKIFHLKILVTYRTSVQGGKGAVNEQEYLNILGELIECPQFDMIDIEWSSAVKIEKYTHLVQRAQQKGLEVVLSHHNFQETPALDELKFIYFKMQKLNPEYLKLAVMPKCQEDVLHLLEAMSLTAKHTTCRIVGISMSSLGKVSRIAQGVFGGTLSYGCIEEPQAPGQIHVSKLKSMVSFYED
>NZ_CP045648.1|WP_002457221.1|2259307_2259730_+|Organic-hydroperoxide-resistance-protein-like-1
MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAEPEVTLTVRLEDDPDAESPKLSVDIHAKVKNVLSQEDAEKYLQDAHDFCPYSKATRGNIDVNLNVEVVE
>NZ_CP045648.1|WP_001829648.1|2259913_2260069_-|hypothetical-protein
MYKEYNLTQHTLPMETSVLIPTNDISRHVNDIVETIPDTEFDEFRHHCGLI
>NZ_CP045648.1|WP_002438972.1|2260443_2260572_+|hypothetical-protein
MINSFQSHHFPIDKNIKLILKTIFKYVVNNVFYSNKTIIAYF
>NZ_CP045648.1|WP_001829623.1|2260654_2261155_+|GNAT-family-N-acetyltransferase
MNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIYSTTESSD
>NZ_CP045648.1|WP_011082628.1|2261425_2262031_-|histidine-phosphatase-family-protein
MKRCLQLVKTLYLMRHGQTVFNLKGKIQGASDSPLTALGVQQANAAQQYFKTKNIHFDYLYSSPQQRACDTLENAVPNQQYWCVKDLKEWGFGLFEGESIELLRAIKQPRYLYGDAVVPFGGESRSEVEHRVYRALYEMMDTTDGETILAVSHGSTIGLFVRNILGYDKGSKFEIGNCNIVKFEYDGEEFIFKDLINPIKK

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Crispr_ID: NZ_CP045648_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045648_4

2408555-2408645

Orphan

Consensus_repeat	Method
TGTTGAATTTCCCGGTGAAATTCTCTATGTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045648_4

>merge|NZ_CP045648|4|2408555-2408645|CRISPRCasFinder
TGTTGAATTTCCCGGTGAAATTCTCTATGTTGGGGCCCCGAACCCCAACTTGCTTTGCCTGTTGAATTTCTCGGTGAAATTCTCTATGTTG

>NZ_CP045648|4|4|2408555-2408645|CRISPRCasFinder
TGTTGAATTTCCCGGTGAAATTCTCTATGTTG	GGGCCCCGAACCCCAACTTGCTTTGCC
TGTTGAATTTCTCGGTGAAATTCTCTATGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045648.1\|WP_001832086.1\|2414186_2414987_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_CP045648.1\|WP_002457534.1\|2416204_2416822_-\|DUF47-domain-containing-protein	unknown	unknown	gnl\|CDD\|224310
NZ_CP045648.1\|WP_001832181.1\|2415179_2416190_-\|inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
NZ_CP045648.1\|WP_002484678.1\|2410678_2412853_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP045648.1\|WP_001832178.1\|2400640_2400937_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_002455993.1\|2410204_2410564_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|130944
NZ_CP045648.1\|WP_001832058.1\|2408759_2409236_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380376
NZ_CP045648.1\|WP_001832176.1\|2413116_2413776_-\|membrane-protein	unknown	unknown	gnl\|CDD\|223742
NZ_CP045648.1\|WP_011082612.1\|2417343_2419245_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
NZ_CP045648.1\|WP_001832028.1\|2402674_2403163_-\|DUF456-domain-containing-protein	unknown	unknown	gnl\|CDD\|225395
NZ_CP045648.1\|WP_001832120.1\|2409235_2409952_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP045648.1\|WP_001832143.1\|2406457_2407603_-\|nitric-oxide-dioxygenase	unknown	unknown	gnl\|CDD\|237337
NZ_CP045648.1\|WP_001832056.1\|2401929_2402619_+\|DUF1129-family-protein	unknown	unknown	gnl\|CDD\|368981
NZ_CP045648.1\|WP_001832142.1\|2401068_2401491_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130141
NZ_CP045648.1\|WP_001832064.1\|2406252_2406438_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045648.1\|WP_001833013.1\|2419222_2419984_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP045648.1\|WP_100481734.1\|2404435_2405290_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP045648.1\|WP_001832101.1\|2407774_2408449_+\|iron-sulfur-cluster-repair-di-iron-protein-ScdA	unknown	unknown	gnl\|CDD\|183940
NZ_CP045648.1\|WP_001832093.1\|2403169_2404378_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341024
NZ_CP045648.1\|WP_002438844.1\|2405370_2405970_-\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|225188

Protein	Function_ID	Function_description	E-value
NZ_CP045648.1\|WP_001832086.1\|2414186_2414987_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	2.45079e-38
NZ_CP045648.1\|WP_002457534.1\|2416204_2416822_-\|DUF47-domain-containing-protein	gnl\|CDD\|224310	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism].	4.24041e-54
NZ_CP045648.1\|WP_001832181.1\|2415179_2416190_-\|inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	3.05703e-103
NZ_CP045648.1\|WP_002484678.1\|2410678_2412853_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	5.21095e-20
NZ_CP045648.1\|WP_002455993.1\|2410204_2410564_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	1.52342e-15
NZ_CP045648.1\|WP_001832058.1\|2408759_2409236_-\|cupin-domain-containing-protein	gnl\|CDD\|380376	cd06121, cupin_YML079wp, Saccharomyces cerevisiae YML079wp and related proteins, cupin domain. This family includes eukaryotic, bacterial, and archaeal proteins homologous to YML079wp, a Saccharomyces cerevisiae cupin-like protein of unknown function that structurally resembles plant seed storage and ligand-binding proteins (canavalin, glycinin, auxin binding protein) as well as the bacterial RmlC epimerase. YML079wp is non-essential in yeast and localizes to the nucleus and cytoplasm. The presence of a hydrophobic ligand within a well-conserved binding pocket inside the cupin beta-barrel and sequence similarity with bacterial epimerases suggests a possible biochemical function for YML079wp and its homologs. Also included in this family are Shewanella oneidensis So0799, Agrobacterium fabrum Atu3615 and Branchiostoma belcheri Bbduf985. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold and forms a homodimer.	5.85126e-71
NZ_CP045648.1\|WP_001832176.1\|2413116_2413776_-\|membrane-protein	gnl\|CDD\|223742	COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only].	3.08106e-29
NZ_CP045648.1\|WP_011082612.1\|2417343_2419245_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	4.54274e-06
NZ_CP045648.1\|WP_001832028.1\|2402674_2403163_-\|DUF456-domain-containing-protein	gnl\|CDD\|225395	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown].	2.3208e-34
NZ_CP045648.1\|WP_001832143.1\|2406457_2407603_-\|nitric-oxide-dioxygenase	gnl\|CDD\|237337	PRK13289, PRK13289, NO-inducible flavohemoprotein.	2.15135e-120
NZ_CP045648.1\|WP_001832056.1\|2401929_2402619_+\|DUF1129-family-protein	gnl\|CDD\|368981	pfam06570, DUF1129, Protein of unknown function (DUF1129). This family consists of several hypothetical bacterial proteins of unknown function.	0.00246668
NZ_CP045648.1\|WP_001832142.1\|2401068_2401491_-\|hypothetical-protein	gnl\|CDD\|130141	TIGR01069, Endonuclease_MutS2, MutS2 family protein. Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function. [DNA metabolism, Other].	0.00156082
NZ_CP045648.1\|WP_001832120.1\|2409235_2409952_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	2.97069e-139
NZ_CP045648.1\|WP_001833013.1\|2419222_2419984_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	1.35373e-102
NZ_CP045648.1\|WP_100481734.1\|2404435_2405290_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.10879e-40
NZ_CP045648.1\|WP_001832101.1\|2407774_2408449_+\|iron-sulfur-cluster-repair-di-iron-protein-ScdA	gnl\|CDD\|183940	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA.	3.23993e-150
NZ_CP045648.1\|WP_001832093.1\|2403169_2404378_-\|MFS-transporter	gnl\|CDD\|341024	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters. This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.79377e-100
NZ_CP045648.1\|WP_002438844.1\|2405370_2405970_-\|DUF402-domain-containing-protein	gnl\|CDD\|225188	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only].	6.52528e-71

>NZ_CP045648.1|WP_001832101.1|2407774_2408449_+|iron-sulfur-cluster-repair-di-iron-protein-ScdA
MITKEDIVADVVTDYPKSADIFRNAGIDFCCGGQESIASAVNHKPNIDLNSLLNKLNHIDNTEGNSTINPKFLNVESLIQYIQSAYHETLKEEFKNLTPYMTKLAKVHGPSHPYLLKLQDLYREFRDSMLDHIRKEDEEDFPKLIQYSQGQDVQNIKIILEDLINDHEDTGQLLNVMNQLTSDYQTPEEACGTWKLVYQRLQNIERQTHQHVHLENHVLFKKVS
>NZ_CP045648.1|WP_001832143.1|2406457_2407603_-|nitric-oxide-dioxygenase
MLTEKEQDIIKQTVPLLQDKGTEITSIFYPKMFEANPELLNMFNQTNQKKGMQSAALAQAVLAAAMNINNLGAIKPAIMPVAHKHCALQVYPEHYPIVGENLLAAIQDVTGLESDDPVIQTWAKAYGEIADVFIKLEQEIYNHMLWKGFKPFKITNITQETSDIKSFTVESEEYDLSQFEPGQYITVDVSSEKLPYRAKRHYSIIDGDENHLVFGVKRDVTTEHEGEVSTILHDEISEGDMINLSAPVGGFSIENTERPQLFIGSGVGMTPLVSMFKKAASLNVPTQMIQAVVTEDERPFAQKLDSITDNYEQAQLHLHVKDKEGYLEAKELEQYLSEQPEIYICGGTKFLHSIINSLKELNYDMNHVHFETFIPRLSVQV
>NZ_CP045648.1|WP_001832064.1|2406252_2406438_-|hypothetical-protein
MKMNPRYVKVFFLYLVSTFISNRLTTNKSLCKTLMQGILGYGLFALGLKYLTIKKKQHQAQ
>NZ_CP045648.1|WP_002438844.1|2405370_2405970_-|DUF402-domain-containing-protein
MTVKVKYIDKRHWRRLVEREYTEVKVNNNRFKGIIGLVTMKKVREPLEVTVVGQNIIVADDNYKWLQILPDKKRYSMTVMFDNKGNPLEYYFDINIKNITQKGNARTIDLCLDVLVLPNGEYELVDEDDLMYALQNKQISKKQYHEAYIIAHQLMIEIEDNFSEIQDKVMRCYHKINHKAQKMKHKRPYKAKKKSHRRH
>NZ_CP045648.1|WP_100481734.1|2404435_2405290_-|LysR-family-transcriptional-regulator
MKIDDYRLLITLDETKTLRKAAEILYISQPAVTQRLKAIEAAFGVEIFIRTKKQLITTTEGSMIIEHARDMLKRERLFFDKIQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNSQFPNVEIQVQVGSTEQIKAHHRDYHVVITRGNKVMNLSNTHLFNDEHYFIYPKDRKEDVTKLPFIEFQADPIYINQIKQWYNDHLGHDYHATITVDQVATCKEMLLSGVGVTILPKIMMKNIDKNMFEFEKVTIDKKPLIRSTYMSYDASMLQLPQVDAFVNLMLNFIR
>NZ_CP045648.1|WP_001832093.1|2403169_2404378_-|MFS-transporter
MFTALLQIKNYKLFVVNMLLLGMGIAVTVPYLILFATKDLGMTTTQYGLLLALAAISQFIVNSIIARFSDTHHLNRKILIITALFMGAVSFSIYFYVHQIWLFIVLYALFQGLFAPAMPQLYASARESINASSSRDRAKFANTVLRSMFSLGFLFGPFIGAQLIELKGYSGLFGGTIAIILFTLILQVFFYKNLPVKNQISEQQHIEKIAPNMFKDKSLFIPFIAFILLHIGQWMYTMNMPLFVTDYLNEKERYVGYLASLCAGLEVPFMVILGILSAKLPTRTLLIIGSVFGGAFYFSIGVFKNFHMMLVGQICLAIFLAILLGLGISYFQDILPDFPGYASTLFANAMVIGQLGGNLLGGVMSHWVGLENVFFVSASSIFVGMILILFTKDQKITIEDVE
>NZ_CP045648.1|WP_001832028.1|2402674_2403163_-|DUF456-domain-containing-protein
MTAILWILIIIAFALAFIGLIKPVIPSLLMLWIGFLIYQFGFHEGRLSWIFYVAMIIFTIMILVADFVMNKYFVNRFGGSKIGEYTALIGVIVGCFVFPPFGIIIIPFVAVFIVELVQGFNFQQAIKVSFGSVIAFLASTIAQGLIMIVMVIWFFLDVFLIN
>NZ_CP045648.1|WP_001832056.1|2401929_2402619_+|DUF1129-family-protein
MKSTAQLTKENNVKALRLNNTDREIFENYMTYVRADLRVNPHDSELMLNRTLKHLIRAGDTGMLAMEFFNHDPKAHAKKEIRELPNETFKNIFKYISHNFILLIGIFCFLKGLIGFFIGGDSNLLYLYTFPLTVIIGLVIIFLFIWMNFKTVQLQCFNNSYWTWWLTYGVIALLLITLFYVFFIPQSFLAFGPYIKVSNWTFIIIAIIIIPISFYVNHHFYNKEANTRI
>NZ_CP045648.1|WP_001832142.1|2401068_2401491_-|hypothetical-protein
MRKWLTLLLITTLVLTACGKSNEKASLEKSIDQLKKENKDLKKQKKKLQEQKDKLKHKQDSLQEDVNDLPAKSTSRDKKNKDNHDAKEKSSDNQSTSANHDDQTNKIKSNQDEHDSQSSKPHTQQKPSQNDRKNNHRQER
>NZ_CP045648.1|WP_001832178.1|2400640_2400937_-|hypothetical-protein
MHEQDFNILEGKKMTLVELGRELENLTGRTIKDTTSDIKRVIAHLPNFESDTDTFVATYHLNHQNDFIDATFVAPKNQSDRLKEIPVHIKLISYISKN
>NZ_CP045648.1|WP_001832058.1|2408759_2409236_-|cupin-domain-containing-protein
MMTANDWIDRLELISHPEGGYFKETMRGDGKGRASFSSIYFLLTQRDISHFHRIDADEVWYYHAGQTLKIHMITPKGEYHTVKLGRDIDCGECLQYCVPKGTIFASTLDSAEGYSLVGCMCQPGFEYEHFELLTQEYLIRQYPQYESIIKRLAISQED
>NZ_CP045648.1|WP_001832120.1|2409235_2409952_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQTLRLVLERAKTYSVPNHIIDRAIDKAKGAGDENYDHLRYEGFGPNGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVAYMFDHTATFGVEGKSVDEVLETLMEQDIDVRDVIDDNGLTIVYAEPDQFAQVQDALREAGVEEFKVAEFEMLPQTDIELSEEDQAIFEKLIDALEDLEDVQNVFHNVDLK
>NZ_CP045648.1|WP_002455993.1|2410204_2410564_-|MarR-family-transcriptional-regulator
MNEQKLIKLLEFYKQYKALSGYIDKKYKLTLNDLAVLYLAKKYCLDERILMQTFLKLATGELDISRTKILMSIRRLIDKEKLNKVRSNRDERKIFLYMDENNMSEFDALFEDVEKFLSY
>NZ_CP045648.1|WP_002484678.1|2410678_2412853_-|AraC-family-transcriptional-regulator
MANSCLHILSKKEYTATRCQDGILLFWPIEGSMHFQQFMKERILSDELYIVNNMDVFSISDNGITLEVYISSDWFTELGYSFFNYHYISDLIQSKNEIKELVAQLTLNFLDNDVDKEQDIINKIVHILANEAIIDKKIAEDQYMYDYYGELKDELNYIYNHIEERLTLKDISNKLYVSKSNLSTQFHLLLGMGFKKYIDTLKISKSIEMLLTTTKTISQISETLGFSNVSTYSRQFKNYLSVTPNAYRAMKKYDKYNGCSDDDVSEHLKSRVQSLICSKMPTNELDNYDEIVIDQYPISNVSTFYSVVQINSIDEIKMLFLQGIHKKIGYEGSNIIFCIMPNLCQYKNSFSQEEMNDIIKIIIEYRLHVAFSIDKIEQIYELNQLFTYQYENLKIMNKCSVSDYNVQFIFNLNEKSIREIYRNILKIQNIELEYKIGLDISCMFNDTAQFKSLASQIKRLKFDYLYIDNARLKSPYLLDNEEGLLLKNILQFKHLIDDLKQFDFSSENLIFLNLYNHQLLNNNEIDLSNSAPLLFKTISKLKKHFKGYGLNVFSNPKVFNAVHLFDENGFKTTFGLIFNHLSWMTNQNQIEQRFYNIIENADQYYLYLYDWRVIESESNESDFKDVDIWINFEDEALIDEYICVIAKVDDEGGNINHMISQNLRHKYVWSTPFLMRVEENFRPYMHIMEHDFKKGPLKIRMKYNAVYLVEIYKKDKINKRRSTT
>NZ_CP045648.1|WP_001832176.1|2413116_2413776_-|membrane-protein
MSQSTHQSTDHKRQSQDKNQTHAYAKVWLYFMYYWMIFGIGCYFGQYLPMSWRKPLSLGLLILILATLFIKRARKYGLVISHIYAIIVGLLSYALFTTYLQNLGAEVFYKNIILAIGAFIAFGIIGYFLIKDASSMGKYLFVTLIALIIAGIIGIFINNPIFHTVITIVSLLLFLLYTLYDFNRMKRGQFSPREMGFNLFINLLNIIEDILSLANRFKN
>NZ_CP045648.1|WP_001832086.1|2414186_2414987_+|LysM-peptidoglycan-binding-domain-containing-protein
MKKLAFAITAASGAAAVLSHHDAEASTQHKVQSGESLWTIAQQYNTSVESIKQNNNLSNNMVFPGQVINVGGSASQNTSSNTSSSSASSHTVVAGESLNIIANKYGVSVDALMQANHLNGYLIMPNQILTIPNGGSGSGSGGTATQTSGNYTSPSFNHQNLYTEGQCTWYVFDKRSQAGKPISTYWSDAKYWASNAANDGYQVDNTPSVGAIMQSTPGPYGHVAYVERINGDGSILISEMNYANGPYNMNYRTIPASEVSSYAFIH
>NZ_CP045648.1|WP_001832181.1|2415179_2416190_-|inorganic-phosphate-transporter
MSYILIVTIAIVIFSLIFDFINGFHDTANAVATAVSTRALTPRRAILLAAVMNFIGALTFTGVAGTITKDIVDPFKLQHGLVVVLAAIIAAIIWNLITWLYGIPSSSSHALIGSIAGAAIASQGSFAVLHYQGFTKIIIVLIISPIIAFCVGYMMYTIVKIVFKNSNLTRTNRNFRFFQIFTAALQSFSHGTNDAQKSMGIITLALIVGNLQDGSNVEPQVWVKVACATAMGLGTAVGGWKIIKTVGGNIMKIRPANGAAADISSALTIFVASSLHFPLSTTHVVSSSILGVGASNRAKGVKWSTAQRMVVTWVITLPISAVLAAIIYFIIHLFLK
>NZ_CP045648.1|WP_002457534.1|2416204_2416822_-|DUF47-domain-containing-protein
MFSKKKDKFMVQLEEMVFNLDRAAIEFGKMDFNTHLDLKAYSDNIKTYESHGDELMHQVISDLNQTFITPIEREDILSLCNAIDDVLDAMEETSAMFEMYSIEYTDEYMAEFVENIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSMKHIFNSETDPITLIKIKDIYQSMEEIADKCQAVANNFETIIMKNS
>NZ_CP045648.1|WP_011082612.1|2417343_2419245_-|ABC-transporter-permease
MASIMSFNEIIFKNFKQNVTHYAIYLLSLVISVVLYFSFVTLKYAHHLHGNQSFPAIKEGSQVGSYFLFIIIVVFLLYANFLFLKRRGRELSLLQIIGLTKKDIMKMIMLEQLMTFMMTTIVGIILGIFGSKILLMIVLRLLGINVSVSIIFNYHAILETLLLIAVSYVLIVFQSYVYLLKRSIKELASDVNKKEFSHTRTTLGEVVLGLLGIIMIVSGYIMSTKLVDNVETIIQPFAILFLTVIGSYFFFRSTVSLIFKAIQRLRNGTVSVTDVMFTSPIIYRVKKNAFSLTVMTVVSAITVSVLCFAALSRSTLTNEVLLSSPHDVTLKNQKQANELAFKLNNRNIEHYYNYKEVVYAKVYKDHLFSEGVYRPKEITVTSDKYIPNVSTKKGQTDIIIPRGSLKDVVKTDKKRTAYVGSKKFRLKVSLRKGINKVYFMSDVDRGRPTLILNDEDYQKIREHIKEKNIVSQYGFDLKNKNDLPELEKLVSSINEDIETRSEAASEISSLTGILLFVTSFLGITFLIAAGCIIYIKQIDETEDELENYTILRKLGFTHQDMSKGLKLKVIFNFGLPLIIALLHAYFASLAYMHLMNVTNQIPIFIVMAVYTATYAVFAIIAYNHSKRTIKHSI
>NZ_CP045648.1|WP_001833013.1|2419222_2419984_-|ABC-transporter-ATP-binding-protein
MSILEVRQLSKVYGDKQAFQEVLKEINLDVDEGEFISIMGPSGSGKTTLLNVLSSIDYMTKGSITINGKQLEKLSNKQLSDIRKKDIGFIFQDYNILNTLTVKENIMLPLSVQKLDKQIMHERYQRIVEALNISDISDKYPSELSGGQRQRTSAARAFINLPSIIFADEPTGALDSKSTLDLLKRLKYMNEEFNTTILMVTHDPVAASFSNRVVMLKDGQIFTELYQGDDDKQTFYKEIIRTQSVLGGINYEL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045648_1	1.1\|482104\|34\|NZ_CP045648\|CRISPRCasFinder	482104-482137	34	NZ_CP045648.1	1394402-1394435	2	0.941
NZ_CP045648_1	1.1\|482104\|34\|NZ_CP045648\|CRISPRCasFinder	482104-482137	34	NZ_CP045648.1	1394461-1394494	2	0.941
NZ_CP045648_1	1.1\|482104\|34\|NZ_CP045648\|CRISPRCasFinder	482104-482137	34	NZ_CP045648.1	1394520-1394553	2	0.941

1. spacer 1.1|482104|34|NZ_CP045648|CRISPRCasFinder matches to position: 1394402-1394435, mismatch: 2, identity: 0.941

gggttcggggccccaacaaagagaatttcaccga	CRISPR spacer
gggttcggggccccaacaaaaagaatttcactga	Protospacer
********************.**********.**

2. spacer 1.1|482104|34|NZ_CP045648|CRISPRCasFinder matches to position: 1394461-1394494, mismatch: 2, identity: 0.941

gggttcggggccccaacaaagagaatttcaccga	CRISPR spacer
gggttcggggccccaacaaaaagaatttcactga	Protospacer
********************.**********.**

3. spacer 1.1|482104|34|NZ_CP045648|CRISPRCasFinder matches to position: 1394520-1394553, mismatch: 2, identity: 0.941

gggttcggggccccaacaaagagaatttcaccga	CRISPR spacer
gggttcggggccccaacaaaaagaatttcactga	Protospacer
********************.**********.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045648_3	3.1\|2256104\|30\|NZ_CP045648\|CRISPRCasFinder	2256104-2256133	30	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1051845-1051874	6	0.8

1. spacer 3.1|2256104|30|NZ_CP045648|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

cttgagctttgctcaggcgttcctcttttt	CRISPR spacer
tttgctttttgctcaggcgttcctgttgtt	Protospacer
.***  .***************** ** **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

229785 : 286544

Staphylococcus_phage(38.46%)

integrase,transposase,tRNA

attL 220052:220069|attR 266083:266100

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
220052:220069	attL	NA	NA	NA	NA
WP_151516914.1\|229785_230766_+\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
WP_002486117.1\|230903_231755_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	9.7e-71	96.4
WP_002486124.1\|232557_233955_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_080012077.1\|235757_236339_+	hypothetical protein	NA	NA	NA	NA
WP_002486146.1\|236603_237416_-	HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002484928.1\|237780_238668_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_002484919.1\|239025_239787_-	tandem-type lipoprotein	NA	NA	NA	NA
WP_001106057.1\|240103_240778_-\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	2.6e-127	99.1
WP_001817892.1\|240868_241066_-	replication family protein	A0A286QS97	Streptococcus_phage	1.2e-08	62.0
WP_000336290.1\|241078_241852_-	protein rep	NA	NA	NA	NA
WP_000119405.1\|242096_243359_-	Plasmid recombination enzyme type 2	NA	NA	NA	NA
WP_001242578.1\|243865_244270_-	bleomycin binding protein	NA	NA	NA	NA
WP_001795128.1\|244486_245257_-	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NA	NA	NA	NA
WP_001106057.1\|245449_246124_-\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	2.6e-127	99.1
WP_020444595.1\|246159_246549_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA
WP_000958858.1\|247305_248049_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA
WP_000872606.1\|248145_248574_+	MaoC family dehydratase	NA	NA	NA	NA
WP_154435876.1\|248619_250629_-	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA
WP_100481765.1\|250725_252483_+	beta-lactam sensor/signal transducer MecR1	NA	NA	NA	NA
WP_000369214.1\|252482_252854_+	mecA-type methicillin resistance repressor MecI	NA	NA	NA	NA
WP_014532405.1\|252938_253007_-	phenol-soluble modulin PSM-mec	NA	NA	NA	NA
WP_010922808.1\|253340_254471_+	ROK family transcriptional regulator	NA	NA	NA	NA
WP_000438836.1\|255950_257015_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_000220507.1\|257150_257411_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA
WP_000378485.1\|259021_261436_-	cadmium-translocating P-type ATPase CadA	E4ZFI9	Streptococcus_phage	1.3e-250	63.4
WP_000159127.1\|261428_261794_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	7.7e-25	49.6
WP_001041908.1\|262031_262409_-	hypothetical protein	NA	NA	NA	NA
WP_002485298.1\|262415_264308_-\|integrase	phage integrase family protein	NA	NA	NA	NA
WP_000088091.1\|264502_264826_-	DNA recombinase	NA	NA	NA	NA
WP_001077283.1\|264818_265025_-	hypothetical protein	NA	NA	NA	NA
WP_000836008.1\|265026_265548_-	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_000833212.1\|265566_265878_-	hypothetical protein	NA	NA	NA	NA
WP_001045719.1\|265880_265970_-	hypothetical protein	NA	NA	NA	NA
WP_000171449.1\|265962_266313_-	hypothetical protein	NA	NA	NA	NA
266083:266100	attR	NA	NA	NA	NA
WP_001186596.1\|266783_268412_-	recombinase RecB	A0A0S2SXR4	Bacillus_phage	1.1e-46	31.7
WP_000816499.1\|268432_269779_-	recombinase family protein	A6M972	Geobacillus_virus	2.0e-22	28.2
WP_001791132.1\|269971_270247_-	hypothetical protein	NA	NA	NA	NA
WP_100481764.1\|270336_272124_-	DUF927 domain-containing protein	NA	NA	NA	NA
WP_000659554.1\|272123_272408_-	DUF1413 domain-containing protein	NA	NA	NA	NA
WP_000613217.1\|272545_273595_+	hypothetical protein	NA	NA	NA	NA
WP_000489177.1\|273647_274220_+	hypothetical protein	Q6DMS4	Streptococcus_phage	5.2e-36	46.0
WP_002485353.1\|274449_275874_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_002504428.1\|275956_276403_-	hypothetical protein	A0A1V0SBV6	Catovirus	1.7e-10	35.4
WP_100214435.1\|277035_277356_-	MFS transporter	NA	NA	NA	NA
WP_001105999.1\|277379_278054_-\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	2.0e-127	99.1
WP_011082551.1\|278321_279683_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000425271.1\|279982_280390_+	Hg(II)-responsive transcriptional regulator MerR	NA	NA	NA	NA
WP_000746201.1\|280406_280760_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_000010351.1\|280756_281437_+	cytochrome c biosynthesis protein	NA	NA	NA	NA
WP_002380761.1\|281562_281910_+	mercury transporter	NA	NA	NA	NA
WP_000193219.1\|281967_283611_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.7e-50	29.4
WP_000790334.1\|283692_284343_+	organomercurial lyase MerB	NA	NA	NA	NA
WP_001802815.1\|284537_285086_-	hypothetical protein	NA	NA	NA	NA
WP_011082552.1\|285282_285498_+	hypothetical protein	NA	NA	NA	NA
WP_001802813.1\|285522_285804_+	hypothetical protein	NA	NA	NA	NA
WP_002487846.1\|285869_286544_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	9.9e-127	98.7

DBSCAN-SWA_2

531103 : 547380

Staphylococcus_phage(50.0%)

transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080033476.1\|531103_531922_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_071813272.1\|531966_532233_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001105991.1\|532718_533393_+\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.8e-128	99.6
WP_001105991.1\|533552_534227_+\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.8e-128	99.6
WP_002504592.1\|534815_535592_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_001831512.1\|535730_536909_+	MFS transporter	NA	NA	NA	NA
WP_080012088.1\|536991_538359_-	carboxylesterase/lipase family protein	NA	NA	NA	NA
WP_001832901.1\|538663_540343_-	APC family permease	NA	NA	NA	NA
WP_002438246.1\|540942_541995_-	2,3-butanediol dehydrogenase	A0A2K9L7I1	Tupanvirus	3.4e-09	21.2
WP_001831407.1\|542484_543741_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.7e-21	53.8
WP_001831629.1\|543743_544379_+	ABC transporter permease	NA	NA	NA	NA
WP_002438247.1\|544446_545340_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002438248.1\|545339_546035_+	ABC transporter permease	NA	NA	NA	NA
WP_002438249.1\|546216_546918_-\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_002438251.1\|546921_547380_-\|holin	antiholin-like murein hydrolase modulator LrgA	NA	NA	NA	NA

DBSCAN-SWA_3

895917 : 1029785

145

Staphylococcus_phage(97.14%)

terminase,integrase,holin,transposase

attL 957670:957689|attR 1000791:1000810

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100481738.1\|895917_897852_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	7.6e-47	26.9
WP_002468998.1\|898198_898834_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_002497516.1\|898974_899256_+	hypothetical protein	NA	NA	NA	NA
WP_002504807.1\|899959_900565_+	LPXTG cell wall anchor domain-containing protein	A0A0N9STB7	Staphylococcus_phage	3.8e-77	100.0
WP_002504808.1\|900707_902354_+	hypothetical protein	A0A0N9SHY1	Staphylococcus_phage	0.0e+00	100.0
WP_002504810.1\|903048_903249_+	hypothetical protein	A0A0N9RTY2	Staphylococcus_phage	1.2e-27	100.0
WP_002504811.1\|903324_904827_-	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGX6	Staphylococcus_phage	3.4e-284	100.0
WP_002504812.1\|904903_907297_-	SGNH/GDSL hydrolase family protein	A0A0N9RRL9	Staphylococcus_phage	0.0e+00	100.0
WP_002504813.1\|907348_907678_-\|holin	phage holin	A0A0N9SK62	Staphylococcus_phage	4.2e-54	100.0
WP_100481737.1\|907699_908212_-	hypothetical protein	A0A0N9RZS7	Staphylococcus_phage	5.5e-45	99.4
WP_002504815.1\|908193_908595_-	hypothetical protein	A0A0N9STA8	Staphylococcus_phage	4.4e-66	100.0
WP_002504816.1\|908701_911371_-	hypothetical protein	A0A0N9SHX2	Staphylococcus_phage	0.0e+00	99.9
WP_002504818.1\|911572_911947_-	hypothetical protein	A0A0N9SK58	Staphylococcus_phage	5.0e-64	100.0
WP_002504819.1\|911949_919995_-	hypothetical protein	A0A0N9RTX0	Staphylococcus_phage	0.0e+00	100.0
WP_154435911.1\|920055_922137_-	hypothetical protein	A0A0N9SGW2	Staphylococcus_phage	0.0e+00	99.7
WP_002504822.1\|930528_931545_-\|integrase	site-specific integrase	A0A0N9SIX3	Staphylococcus_phage	2.3e-196	99.7
WP_154435913.1\|931560_932034_-	hypothetical protein	A0A0N9RRK6	Staphylococcus_phage	7.7e-86	99.4
WP_000700062.1\|932033_932591_-	hypothetical protein	A0A0N9SK55	Staphylococcus_phage	2.7e-98	100.0
WP_002504825.1\|932674_933466_-	hypothetical protein	A0A0N7GFG4	Staphylococcus_phage	5.4e-140	100.0
WP_000391855.1\|933504_934377_-	hypothetical protein	A0A0N9RZR7	Staphylococcus_phage	1.5e-159	100.0
WP_001177112.1\|934382_934904_-	hypothetical protein	A0A0N9ST98	Staphylococcus_phage	2.0e-95	100.0
WP_000384369.1\|934893_935559_-	hypothetical protein	A0A0N9SHW2	Staphylococcus_phage	1.3e-123	100.0
WP_042742626.1\|935562_935880_-	hypothetical protein	A0A0N9SK47	Staphylococcus_phage	7.5e-53	99.0
WP_000134539.1\|935869_936304_-	hypothetical protein	A0A0N9RTW0	Staphylococcus_phage	3.5e-69	100.0
WP_000985467.1\|936321_936873_-	hypothetical protein	A0A0N9SGV3	Staphylococcus_phage	1.5e-80	100.0
WP_002504827.1\|936947_937949_-	hypothetical protein	A0A0N9S885	Staphylococcus_phage	3.3e-110	100.0
WP_154435915.1\|937987_938428_-	hypothetical protein	A0A0N9SIW4	Staphylococcus_phage	2.3e-76	99.3
WP_002504829.1\|938455_939835_-	hypothetical protein	A0A0N9RRJ7	Staphylococcus_phage	2.0e-246	100.0
WP_000389594.1\|939827_941390_-	hypothetical protein	A0A0N9SK48	Staphylococcus_phage	6.6e-299	100.0
WP_002504830.1\|941407_943207_-\|terminase	terminase	A0A0N9RZP6	Staphylococcus_phage	6.8e-207	100.0
WP_001007716.1\|943199_944084_-	hypothetical protein	A0A0N9SHV5	Staphylococcus_phage	4.5e-172	100.0
WP_002504831.1\|945778_946963_-	hypothetical protein	A0A0N9SK37	Staphylococcus_phage	1.3e-222	100.0
WP_000057341.1\|946971_947157_-	hypothetical protein	A0A0N7GFG2	Staphylococcus_phage	1.7e-25	100.0
WP_002504832.1\|947182_947512_-	DNA-binding protein	A0A0N9RTU9	Staphylococcus_phage	1.7e-52	100.0
WP_002504833.1\|947771_949268_-	hypothetical protein	A0A0N9SGU3	Staphylococcus_phage	2.3e-269	100.0
WP_100481741.1\|950843_950918_-	hypothetical protein	NA	NA	NA	NA
WP_104832459.1\|951141_952320_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.3e-61	37.2
WP_002504834.1\|953284_954160_+	hypothetical protein	A0A0N9SIV7	Staphylococcus_phage	4.8e-166	100.0
WP_002504835.1\|956018_956276_+	hypothetical protein	A0A0N9RRI7	Staphylococcus_phage	1.7e-15	100.0
WP_010959243.1\|956540_956702_+	hypothetical protein	NA	NA	NA	NA
957670:957689	attL	NA	NA	NA	NA
WP_002504554.1\|958089_958374_+	hypothetical protein	A0A0N9SK40	Staphylococcus_phage	1.6e-46	100.0
WP_002504552.1\|958553_958769_+	hypothetical protein	A0A0N7GFG1	Staphylococcus_phage	2.2e-35	100.0
WP_010959242.1\|958843_959104_+	hypothetical protein	A0A0N9ST70	Staphylococcus_phage	7.1e-41	100.0
WP_010959241.1\|959240_959630_+	hypothetical protein	A0A0N9SHU5	Staphylococcus_phage	3.9e-67	100.0
WP_002504625.1\|959782_960442_+	antirestriction protein ArdA	A0A0N9SK30	Staphylococcus_phage	9.4e-122	100.0
WP_002504624.1\|960485_960809_+	hypothetical protein	A0A0N9RTT7	Staphylococcus_phage	1.5e-56	100.0
WP_002504623.1\|960901_961165_+	hypothetical protein	A0A0N9SGT4	Staphylococcus_phage	3.4e-43	100.0
WP_010959240.1\|961193_961874_+	hypothetical protein	A0A0N9S858	Staphylococcus_phage	4.6e-124	100.0
WP_010959239.1\|961989_962442_+	hypothetical protein	A0A0N9SIV3	Staphylococcus_phage	6.7e-79	100.0
WP_012099556.1\|962441_962963_+	hypothetical protein	A0A0N7GFG0	Staphylococcus_phage	5.2e-91	100.0
WP_002504685.1\|963040_963469_+	hypothetical protein	A0A0N9RRH5	Staphylococcus_phage	5.0e-76	100.0
WP_002504683.1\|964152_965196_+\|integrase	site-specific integrase	A0A0N9SK33	Staphylococcus_phage	3.8e-194	100.0
WP_002504682.1\|965483_966764_+	hypothetical protein	A0A0N9RZM2	Staphylococcus_phage	6.5e-236	100.0
WP_002504681.1\|966775_967780_+	hypothetical protein	A0A0N9ST56	Staphylococcus_phage	3.1e-185	100.0
WP_002504680.1\|967939_968188_+	hypothetical protein	A0A0N9SHT9	Staphylococcus_phage	2.0e-40	100.0
WP_002504679.1\|968203_968692_+	hypothetical protein	A0A0N9SK25	Staphylococcus_phage	8.1e-54	100.0
WP_000668931.1\|968709_969390_+	hypothetical protein	A0A0N9RTS7	Staphylococcus_phage	2.0e-127	100.0
WP_154435916.1\|969433_970393_+	hypothetical protein	A0A0N7GFF9	Staphylococcus_phage	7.4e-168	99.4
WP_002504678.1\|970516_971485_+	ATP-binding protein	A0A0N9SGS5	Staphylococcus_phage	5.3e-182	100.0
WP_002504677.1\|971561_972080_+	hypothetical protein	A0A0N9S850	Staphylococcus_phage	2.1e-92	100.0
WP_002504676.1\|972101_973634_+	helicase DnaB	A0A0N9SIU7	Staphylococcus_phage	5.6e-295	100.0
WP_154435918.1\|973650_974763_+	hypothetical protein	A0A0N9RRG7	Staphylococcus_phage	1.4e-218	99.7
WP_010959235.1\|974765_976532_+	single-stranded DNA-binding protein	A0A0N9SK20	Staphylococcus_phage	0.0e+00	100.0
WP_154435920.1\|977153_977828_-\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	2.4e-128	99.6
WP_100502339.1\|977941_978898_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.9e-172	91.8
WP_042742622.1\|978939_979443_+	trimethoprim-resistant dihydrofolate reductase DfrC	A0A0N9S8H6	Staphylococcus_phage	3.2e-90	100.0
WP_000195429.1\|979520_980693_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_000393259.1\|980750_981143_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
WP_001028141.1\|981143_982583_+	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A0N9SKF6	Staphylococcus_phage	8.5e-285	100.0
WP_000195429.1\|982712_983885_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_001118605.1\|984009_984432_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.0e-68	100.0
WP_001106022.1\|984463_985138_-\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.2e-129	100.0
WP_002504581.1\|985181_986228_+	hypothetical protein	A0A0N9RU46	Staphylococcus_phage	4.8e-197	100.0
WP_002504580.1\|986238_986436_+	hypothetical protein	A0A0N9SH39	Staphylococcus_phage	4.0e-28	100.0
WP_002504579.1\|986448_986724_+	hypothetical protein	A0A0N7GFH6	Staphylococcus_phage	5.0e-45	100.0
WP_002504577.1\|987015_987324_+	hypothetical protein	A0A0N9RRS4	Staphylococcus_phage	5.8e-50	100.0
WP_000312937.1\|987326_987590_+	hypothetical protein	A0A0N9SKF2	Staphylococcus_phage	6.9e-44	100.0
WP_002504576.1\|987629_988040_+	hypothetical protein	A0A0N9RZZ6	Staphylococcus_phage	7.0e-75	100.0
WP_000862563.1\|988036_988384_+	nuclease	A0A0N9STK3	Staphylococcus_phage	4.4e-62	100.0
WP_000359469.1\|988389_988614_+	hypothetical protein	A0A0N9SI40	Staphylococcus_phage	2.0e-31	100.0
WP_002504575.1\|988635_988875_+	hypothetical protein	A0A0N7GFH5	Staphylococcus_phage	1.7e-36	100.0
WP_002504574.1\|988897_989173_+	hypothetical protein	A0A0N9SKC5	Staphylococcus_phage	4.5e-46	100.0
WP_002504573.1\|989194_989461_+	hypothetical protein	A0A0N9RU37	Staphylococcus_phage	1.0e-42	100.0
WP_002504572.1\|989465_989669_+	hypothetical protein	A0A0N9SH33	Staphylococcus_phage	5.7e-30	100.0
WP_002504571.1\|989675_989864_+	hypothetical protein	A0A0N9S8F9	Staphylococcus_phage	8.2e-31	100.0
WP_002504570.1\|989865_990348_+	hypothetical protein	A0A0N9SJ15	Staphylococcus_phage	3.4e-73	100.0
WP_002504569.1\|990363_990543_+	hypothetical protein	A0A0N9RRR6	Staphylococcus_phage	2.1e-23	100.0
WP_001187008.1\|990527_990713_+	hypothetical protein	A0A0N9SKE7	Staphylococcus_phage	1.5e-24	100.0
WP_002504568.1\|990728_991013_+	hypothetical protein	A0A0N7GFH4	Staphylococcus_phage	5.0e-48	100.0
WP_002504567.1\|991009_991165_+	transcriptional regulator	A0A0N9RZY5	Staphylococcus_phage	1.7e-18	100.0
WP_002504566.1\|991190_991463_+	hypothetical protein	A0A0N9STJ5	Staphylococcus_phage	2.7e-43	100.0
WP_002504565.1\|991478_992021_+	hypothetical protein	A0A0N9SI25	Staphylococcus_phage	2.7e-98	100.0
WP_002504563.1\|992209_992431_+	hypothetical protein	A0A0N9RU28	Staphylococcus_phage	1.3e-35	100.0
WP_010959229.1\|992430_993156_+	serine/threonine protein phosphatase	A0A0N9SH20	Staphylococcus_phage	2.4e-139	100.0
WP_002504561.1\|993148_993466_+	hypothetical protein	A0A0N9S8E9	Staphylococcus_phage	3.7e-52	100.0
WP_002504560.1\|993465_994116_+	hypothetical protein	A0A0N7GFH3	Staphylococcus_phage	3.1e-117	100.0
WP_002504559.1\|994115_994634_+	hypothetical protein	A0A0N9SJ06	Staphylococcus_phage	2.8e-97	99.4
WP_002504558.1\|994796_995027_+	addiction module antitoxin	A0A0N9RRQ9	Staphylococcus_phage	1.7e-33	100.0
WP_002504557.1\|995026_995422_+	type II toxin-antitoxin system death-on-curing family toxin	A0A0N9SKD8	Staphylococcus_phage	1.0e-67	100.0
WP_002504556.1\|995724_995916_+	hypothetical protein	A0A0N9RZX7	Staphylococcus_phage	3.9e-20	88.9
WP_000755772.1\|995899_996169_+	hypothetical protein	A0A0N9STI7	Staphylococcus_phage	6.9e-39	100.0
WP_010959224.1\|996225_996720_+	hypothetical protein	A0A0N9SI15	Staphylococcus_phage	6.2e-86	100.0
WP_000686449.1\|996723_997524_+	serine/threonine protein phosphatase	A0A0N9SKA2	Staphylococcus_phage	4.0e-151	100.0
WP_002504538.1\|997632_998355_+	hypothetical protein	A0A0N7GFH2	Staphylococcus_phage	2.5e-91	100.0
WP_002504537.1\|998460_999102_+	hypothetical protein	A0A0N9RU21	Staphylococcus_phage	2.6e-60	100.0
WP_002504535.1\|999349_999754_-	YolD-like family protein	A0A0N9S8D9	Staphylococcus_phage	1.5e-74	100.0
WP_002504534.1\|1000106_1000667_-	hypothetical protein	A0A0N9SJ02	Staphylococcus_phage	4.3e-67	100.0
WP_002504533.1\|1000833_1001208_+	hypothetical protein	A0A0N9RRQ3	Staphylococcus_phage	7.3e-63	100.0
1000791:1000810	attR	NA	NA	NA	NA
WP_010959223.1\|1001220_1002669_+	PHP domain-containing protein	A0A0N9SKC7	Staphylococcus_phage	1.5e-281	100.0
WP_154435922.1\|1003131_1005618_+	hypothetical protein	A0A0N7GFH1	Staphylococcus_phage	0.0e+00	99.9
WP_002504530.1\|1005729_1006110_+	hypothetical protein	A0A0N9STI1	Staphylococcus_phage	4.2e-50	99.2
WP_002504529.1\|1006247_1006562_+	hypothetical protein	A0A0N9SI08	Staphylococcus_phage	5.4e-51	100.0
WP_010959221.1\|1006571_1007870_+	ATP-dependent DNA ligase	A0A0N9SK95	Staphylococcus_phage	1.3e-244	100.0
WP_002504527.1\|1007957_1008347_+	hypothetical protein	A0A0N9RU12	Staphylococcus_phage	1.1e-50	100.0
WP_002504526.1\|1008645_1008912_+	hypothetical protein	A0A0N9S8D1	Staphylococcus_phage	2.9e-42	100.0
WP_002504525.1\|1008904_1009192_+	hypothetical protein	A0A0N9SIZ8	Staphylococcus_phage	4.4e-44	100.0
WP_002504524.1\|1009172_1009496_+	hypothetical protein	A0A0N7GFH0	Staphylococcus_phage	8.2e-55	100.0
WP_000865652.1\|1009501_1009753_+	hypothetical protein	A0A0N9RRP5	Staphylococcus_phage	3.8e-39	100.0
WP_002504522.1\|1009752_1009935_+	hypothetical protein	A0A0N9SKA8	Staphylococcus_phage	1.4e-27	100.0
WP_002504521.1\|1009949_1010561_+	nucleoside 2-deoxyribosyltransferase	A0A0N9RZV9	Staphylococcus_phage	2.8e-112	100.0
WP_002504520.1\|1010553_1010745_+	hypothetical protein	A0A0N9STH2	Staphylococcus_phage	1.0e-33	100.0
WP_154435924.1\|1010734_1011421_+	methyltransferase domain-containing protein	A0A0N9SHZ9	Staphylococcus_phage	3.8e-126	99.6
WP_000598581.1\|1011435_1012434_+	DNA cytosine methyltransferase	A0A0N9SK84	Staphylococcus_phage	3.7e-194	100.0
WP_000792728.1\|1012466_1012820_+	hypothetical protein	A0A0N9RU04	Staphylococcus_phage	1.2e-59	100.0
WP_000356944.1\|1012822_1013005_+	hypothetical protein	A0A0N7GFG9	Staphylococcus_phage	3.1e-27	100.0
WP_000824898.1\|1013018_1013249_+	hypothetical protein	A0A0N9SGZ7	Staphylococcus_phage	1.8e-32	100.0
WP_002504517.1\|1013248_1013845_+	hypothetical protein	A0A0N9S8C0	Staphylococcus_phage	1.9e-57	92.1
WP_002504516.1\|1013970_1014480_+	siphovirus Gp157 family protein	A0A0N9SIY9	Staphylococcus_phage	2.1e-84	100.0
WP_002504515.1\|1014491_1015193_+	hypothetical protein	A0A0N9RRN5	Staphylococcus_phage	4.2e-128	99.6
WP_002504513.1\|1015393_1015807_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A0N9RZU5	Staphylococcus_phage	1.8e-70	99.3
WP_002504512.1\|1015806_1016253_+	hypothetical protein	A0A0N9STF9	Staphylococcus_phage	4.0e-76	100.0
WP_044555413.1\|1016307_1019184_+	hypothetical protein	A0A0N7GFG8	Staphylococcus_phage	0.0e+00	100.0
WP_002504510.1\|1019337_1020162_+	HNH endonuclease	A0A0N9SHZ0	Staphylococcus_phage	2.7e-158	100.0
WP_071813268.1\|1020352_1020709_+	ribonucleoside-diphosphate reductase	A0A2H4J2N6	uncultured_Caudovirales_phage	5.9e-38	60.2
WP_002504509.1\|1020754_1021777_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0N9SK77	Staphylococcus_phage	1.1e-198	100.0
WP_002504508.1\|1021804_1022407_+	AAA family ATPase	A0A0N9RTZ3	Staphylococcus_phage	4.0e-111	100.0
WP_002504507.1\|1022447_1022696_+	thioredoxin family protein	A0A0N9SGY3	Staphylococcus_phage	1.8e-41	100.0
WP_002504506.1\|1022711_1022951_+	hypothetical protein	A0A0N9S8B1	Staphylococcus_phage	6.7e-38	100.0
WP_002504505.1\|1022963_1023710_+	NTP pyrophosphohydrolase	A0A0N9SIY2	Staphylococcus_phage	5.6e-139	100.0
WP_002504504.1\|1023711_1024107_+	hypothetical protein	A0A0N9RRM7	Staphylococcus_phage	5.1e-67	100.0
WP_001130902.1\|1024090_1024684_+	RusA family crossover junction endodeoxyribonuclease	A0A0N7GFG7	Staphylococcus_phage	7.9e-112	100.0
WP_002504503.1\|1024885_1025467_+	DNA-binding protein	A0A0N9SK69	Staphylococcus_phage	3.8e-103	100.0
WP_001260014.1\|1025456_1026995_+	recombinase family protein	A0A0N9RZT8	Staphylococcus_phage	5.3e-277	100.0
WP_002469006.1\|1027876_1028101_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_002477475.1\|1028534_1029785_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	9.7e-35	29.7

DBSCAN-SWA_4

1134243 : 1163534

Bacillus_phage(41.67%)

terminase,head,capsid,integrase,tail,protease,portal

attL 1134138:1134163|attR 1171417:1171442

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1134138:1134163	attL	NA	NA	NA	NA
WP_002484510.1\|1134243_1135290_-\|integrase	tyrosine-type recombinase/integrase	A0A1J0MFS3	Staphylococcus_phage	5.0e-53	36.3
WP_012088039.1\|1135335_1136067_-	hypothetical protein	NA	NA	NA	NA
WP_002446812.1\|1136107_1136482_-	hypothetical protein	NA	NA	NA	NA
WP_002446811.1\|1136636_1136972_-	helix-turn-helix transcriptional regulator	A0A2I6PEN2	Staphylococcus_phage	1.4e-28	58.9
WP_002446810.1\|1137132_1137324_+	helix-turn-helix transcriptional regulator	A0A2I6PEL6	Staphylococcus_phage	3.1e-17	66.7
WP_002446809.1\|1137377_1137701_+	DUF771 domain-containing protein	NA	NA	NA	NA
WP_002446808.1\|1137716_1137911_+	hypothetical protein	NA	NA	NA	NA
WP_002446807.1\|1138058_1139300_+	helicase SNF2	A0A1B1P7L4	Bacillus_phage	6.9e-134	57.2
WP_002484586.1\|1139302_1139620_+	hypothetical protein	A0A2P0ZLA7	Lactobacillus_phage	3.7e-23	46.5
WP_002484599.1\|1139612_1139909_+	hypothetical protein	A0A1B1P7M6	Bacillus_phage	3.6e-25	58.2
WP_002495697.1\|1139908_1141720_+	AAA family ATPase	A0A1B1P7N0	Bacillus_phage	1.1e-164	57.4
WP_002484592.1\|1141738_1141945_+	hypothetical protein	NA	NA	NA	NA
WP_002484600.1\|1141996_1142479_+	DUF669 domain-containing protein	A0A2H4J1S8	uncultured_Caudovirales_phage	8.9e-21	38.4
WP_002484609.1\|1142528_1144247_+	hypothetical protein	A0A1B1P7M5	Bacillus_phage	1.3e-207	63.5
WP_002484590.1\|1144260_1144611_+	transcriptional regulator	A0A2H4IYG5	uncultured_Caudovirales_phage	4.8e-16	38.8
WP_002484612.1\|1144641_1144860_+	DUF3310 domain-containing protein	Q4ZC12	Staphylococcus_virus	1.9e-26	78.6
WP_002484605.1\|1144866_1145598_+	hypothetical protein	H9A0T0	Staphylococcus_phage	5.4e-62	49.2
WP_002484596.1\|1145662_1145983_+	phosphoribosyl-ATP diphosphatase	A0A2H4J2H9	uncultured_Caudovirales_phage	4.6e-42	81.6
WP_002484581.1\|1146010_1146478_-	hypothetical protein	A0A1W6JPR4	Staphylococcus_phage	3.5e-22	41.5
WP_002484606.1\|1146545_1146791_+	hypothetical protein	NA	NA	NA	NA
WP_002484603.1\|1146868_1147063_+	hypothetical protein	NA	NA	NA	NA
WP_002484601.1\|1147092_1148967_+	DNA primase	A0A1B1P7L5	Bacillus_phage	1.2e-211	58.0
WP_002484607.1\|1149290_1149782_+	DNA-directed RNA polymerase sigma-70 factor	S5MAA9	Brevibacillus_phage	2.6e-07	28.0
WP_002484574.1\|1149985_1150603_+	hypothetical protein	NA	NA	NA	NA
WP_002446790.1\|1150884_1151175_+	HNH endonuclease	D2XR61	Bacillus_phage	3.2e-18	42.2
WP_002491654.1\|1151497_1151836_+	hypothetical protein	D2XR14	Bacillus_phage	5.8e-11	39.4
WP_002484595.1\|1151819_1153454_+\|terminase	terminase large subunit	A0A0U4B089	Bacillus_phage	1.8e-182	56.6
WP_002484608.1\|1153469_1154606_+\|portal	phage portal protein	A0A0U4IIQ9	Bacillus_phage	4.0e-88	43.8
WP_002484598.1\|1154605_1155352_+\|protease	Clp protease ClpP	A0A2H4J8Y7	uncultured_Caudovirales_phage	6.4e-42	47.4
WP_002484575.1\|1155376_1156534_+\|capsid	phage major capsid protein	A0A0U4JIF4	Bacillus_phage	2.2e-97	51.7
WP_002484579.1\|1156560_1156869_+	hypothetical protein	A0A2H4JF26	uncultured_Caudovirales_phage	1.5e-10	39.1
WP_002446783.1\|1156840_1157170_+\|head	phage head closure protein	NA	NA	NA	NA
WP_002446782.1\|1157169_1157508_+	hypothetical protein	NA	NA	NA	NA
WP_002484584.1\|1157507_1157945_+	hypothetical protein	NA	NA	NA	NA
WP_002484613.1\|1157950_1158655_+	hypothetical protein	NA	NA	NA	NA
WP_154435926.1\|1158678_1159029_+	hypothetical protein	NA	NA	NA	NA
WP_002446778.1\|1159076_1159289_+	hypothetical protein	NA	NA	NA	NA
WP_002504620.1\|1159352_1163534_+\|tail	phage tail tape measure protein	A0A2P0ZLF1	Lactobacillus_phage	1.9e-63	42.6
1171417:1171442	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1205538 : 1294834

Staphylococcus_phage(76.92%)

integrase,transposase,tRNA,protease

attL 1234049:1234065|attR 1248186:1248202

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011082735.1\|1205538_1206618_-\|integrase	site-specific integrase	A0A1J0MFS3	Staphylococcus_phage	1.6e-70	42.1
WP_002484689.1\|1207583_1207784_+	hypothetical protein	NA	NA	NA	NA
WP_002484687.1\|1207816_1208353_+	hypothetical protein	NA	NA	NA	NA
WP_002505518.1\|1208834_1209164_+	hypothetical protein	NA	NA	NA	NA
WP_011082734.1\|1209630_1210077_+	DUF771 domain-containing protein	NA	NA	NA	NA
WP_002484696.1\|1210073_1210523_+	hypothetical protein	A0A097PBE7	Streptococcus_pyogenes_phage	5.4e-12	40.4
WP_002484694.1\|1210494_1210920_+	hypothetical protein	NA	NA	NA	NA
WP_011082733.1\|1210924_1211185_+	hypothetical protein	NA	NA	NA	NA
WP_011082732.1\|1211224_1212115_-	hypothetical protein	NA	NA	NA	NA
WP_011082731.1\|1212225_1213473_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002505516.1\|1213489_1216528_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA
WP_002484414.1\|1216528_1216798_+	hypothetical protein	NA	NA	NA	NA
WP_002484412.1\|1216914_1217217_+	hypothetical protein	NA	NA	NA	NA
WP_002484415.1\|1217286_1219533_+	hypothetical protein	NA	NA	NA	NA
WP_154435928.1\|1219533_1219770_+	hypothetical protein	NA	NA	NA	NA
WP_000195429.1\|1219740_1220913_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_154435930.1\|1220931_1221558_+	hypothetical protein	NA	NA	NA	NA
WP_002505512.1\|1221557_1224137_+	TraM recognition domain-containing protein	NA	NA	NA	NA
WP_100481712.1\|1224133_1226431_+	hypothetical protein	NA	NA	NA	NA
WP_002484393.1\|1226430_1226832_+	hypothetical protein	NA	NA	NA	NA
WP_002484394.1\|1226878_1227205_+	hypothetical protein	NA	NA	NA	NA
WP_011082729.1\|1227210_1227807_+	hypothetical protein	NA	NA	NA	NA
WP_002484404.1\|1227832_1229782_+	ATP-binding protein	NA	NA	NA	NA
WP_002484401.1\|1229785_1230856_+	CHAP domain-containing protein	A0A249Y1A9	Staphylococcus_phage	2.0e-33	58.0
WP_002484410.1\|1230876_1231479_+	hypothetical protein	NA	NA	NA	NA
WP_002484407.1\|1231475_1232333_+	hypothetical protein	NA	NA	NA	NA
WP_011082728.1\|1232363_1232483_+	hypothetical protein	NA	NA	NA	NA
WP_011082727.1\|1232538_1232859_+	hypothetical protein	NA	NA	NA	NA
WP_002484396.1\|1232855_1233206_+	hypothetical protein	NA	NA	NA	NA
WP_002484400.1\|1233210_1234515_+	hypothetical protein	NA	NA	NA	NA
1234049:1234065	attL	NA	NA	NA	NA
WP_002484399.1\|1234556_1236713_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	2.3e-76	38.1
WP_011082726.1\|1236681_1237161_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002484408.1\|1237171_1237933_+	class A sortase	NA	NA	NA	NA
WP_002484406.1\|1238008_1238221_+	hypothetical protein	NA	NA	NA	NA
WP_002484931.1\|1238286_1240623_+	DUF3991 domain-containing protein	NA	NA	NA	NA
WP_000195429.1\|1241297_1242470_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_002484614.1\|1243166_1244081_-	DUF4238 domain-containing protein	NA	NA	NA	NA
WP_002505786.1\|1244381_1245755_+	ATP-binding protein	V9QJ85	Oenococcus_phage	1.5e-52	31.9
WP_002505509.1\|1245806_1246301_+	hypothetical protein	NA	NA	NA	NA
WP_100481713.1\|1246546_1246639_-	hypothetical protein	NA	NA	NA	NA
WP_002456422.1\|1246613_1247108_-\|integrase	site-specific integrase	B7T092	Staphylococcus_virus	3.8e-67	76.1
WP_002456423.1\|1247266_1247479_+	hypothetical protein	A0A2H4JCA1	uncultured_Caudovirales_phage	7.3e-20	72.9
WP_002456424.1\|1247858_1248593_-	hypothetical protein	NA	NA	NA	NA
1248186:1248202	attR	NA	NA	NA	NA
WP_002456426.1\|1249118_1249406_-	hypothetical protein	A0A2H4JGN1	uncultured_Caudovirales_phage	5.5e-18	50.0
WP_002456427.1\|1249567_1250233_-	hypothetical protein	A0A2H4J5B8	uncultured_Caudovirales_phage	7.0e-08	41.8
WP_002456428.1\|1250327_1250474_-	hypothetical protein	NA	NA	NA	NA
WP_154435932.1\|1251483_1252908_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.9e-172	63.7
WP_001829851.1\|1252897_1253899_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	6.9e-92	50.2
WP_001829824.1\|1253895_1254147_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.9e-35	81.9
WP_010959198.1\|1254205_1254682_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	3.3e-44	58.1
WP_002456431.1\|1254668_1255454_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.0e-99	71.3
WP_002469572.1\|1255684_1257277_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.6e-268	83.6
WP_001829830.1\|1257646_1258846_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.1e-192	85.4
WP_002456434.1\|1258948_1259857_+	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.8e-102	80.6
WP_002456435.1\|1260036_1260873_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	6.1e-110	68.6
WP_002469577.1\|1261157_1261313_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	5.2e-15	79.6
WP_104832471.1\|1261542_1262721_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.7e-60	37.0
WP_002484462.1\|1263199_1263553_-	CrcB family protein	NA	NA	NA	NA
WP_001830726.1\|1263549_1263915_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	4.1e-34	57.0
WP_002446728.1\|1263951_1264260_-	hypothetical protein	NA	NA	NA	NA
WP_002484454.1\|1264536_1265250_+	transaldolase	M1PR54	Cyanophage	7.0e-22	37.4
WP_002467846.1\|1265389_1265833_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	4.1e-20	43.5
WP_154435934.1\|1265870_1266263_-	competence protein ComK	NA	NA	NA	NA
WP_002484457.1\|1266268_1266748_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	9.1e-26	42.9
WP_010959195.1\|1266803_1266923_-	hypothetical protein	NA	NA	NA	NA
WP_002456441.1\|1266955_1267171_+	hypothetical protein	NA	NA	NA	NA
WP_001830727.1\|1267548_1268400_+	autolysin	A0A1J0MFB0	Staphylococcus_phage	1.0e-32	35.6
WP_011082717.1\|1268738_1270232_+	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.5e-13	65.6
WP_002494782.1\|1270667_1271711_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	8.9e-135	66.8
WP_002467848.1\|1271717_1272350_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-87	77.6
WP_002484458.1\|1272362_1273544_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	5.7e-178	75.8
WP_002456446.1\|1273556_1274018_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-59	84.2
WP_154435936.1\|1274246_1275275_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	5.9e-131	69.7
WP_002484455.1\|1275517_1276345_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001830894.1\|1277473_1278037_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	1.9e-67	66.5
WP_001830802.1\|1278033_1278987_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.3e-67	84.7
WP_001830884.1\|1279093_1280308_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	4.6e-183	83.7
WP_002497663.1\|1280599_1283014_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.3
WP_001830891.1\|1283039_1283351_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.1e-35	71.8
WP_154435938.1\|1283755_1294834_+	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	4.9e-29	25.3

DBSCAN-SWA_6

1776185 : 1806839

Staphylococcus_phage(51.72%)

terminase,head,capsid,integrase,tail,protease,portal,holin

attL 1775877:1775936|attR 1806914:1807036

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1775877:1775936	attL	NA	NA	NA	NA
WP_002457563.1\|1776185_1776398_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	6.4e-16	62.3
WP_002484791.1\|1776787_1777519_-	hypothetical protein	NA	NA	NA	NA
WP_002458418.1\|1777525_1778299_-	hypothetical protein	Q4ZAU0	Staphylococcus_virus	2.8e-48	41.4
WP_002458419.1\|1778477_1779395_-	N-acetylmuramoyl-L-alanine amidase	A0A1W6JNM6	Staphylococcus_phage	5.0e-65	56.1
WP_002484783.1\|1779434_1779830_-\|holin	phage holin family protein	A0A1S6KVE0	Staphylococcus_phage	1.7e-17	37.9
WP_002484785.1\|1779853_1781131_-	DUF2479 domain-containing protein	A0A1J0MFQ3	Staphylococcus_phage	1.8e-124	52.2
WP_002458423.1\|1781148_1782165_-	SGNH/GDSL hydrolase family protein	A0A1J0MFI8	Staphylococcus_phage	1.9e-97	56.0
WP_002458424.1\|1782177_1782774_-	hypothetical protein	A0A1J0MFD6	Staphylococcus_phage	5.8e-54	49.1
WP_002484790.1\|1782757_1782979_-	hypothetical protein	A0A1J0MF94	Staphylococcus_phage	9.7e-07	64.1
WP_002458425.1\|1782965_1784144_-	hypothetical protein	A0A1W6JQ67	Staphylococcus_phage	2.2e-60	32.1
WP_002458426.1\|1784156_1784981_-\|tail	phage tail family protein	A0A1D6Z283	Staphylococcus_phage	2.1e-46	37.6
WP_100481644.1\|1784982_1789473_-\|tail	phage tail tape measure protein	A0A075M036	Staphylococcus_phage	9.6e-218	46.9
WP_002484788.1\|1789645_1789996_-	hypothetical protein	NA	NA	NA	NA
WP_002458430.1\|1790019_1790679_-\|tail	tail protein	A0A059T7Y4	Listeria_phage	5.6e-26	39.6
WP_002484779.1\|1790690_1791080_-	hypothetical protein	Q4ZCL5	Staphylococcus_virus	9.1e-16	38.4
WP_002484776.1\|1791076_1791490_-	hypothetical protein	A0A059T5F3	Listeria_phage	7.9e-18	39.8
WP_012084000.1\|1791489_1791834_-\|head	phage head closure protein	G4KNQ4	Staphylococcus_phage	2.5e-09	31.1
WP_002458433.1\|1791838_1792177_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_002458434.1\|1792186_1792474_-	hypothetical protein	NA	NA	NA	NA
WP_002458435.1\|1792487_1793738_-\|capsid	phage major capsid protein	R9TQG7	Paenibacillus_phage	2.5e-67	37.8
WP_002484782.1\|1793730_1794375_-\|head,protease	HK97 family phage prohead protease	V5USG3	Enterococcus_phage	9.1e-21	38.5
WP_002458436.1\|1794364_1795591_-\|portal	phage portal protein	A0A290G4I4	Caldibacillus_phage	1.6e-58	40.1
WP_002458437.1\|1795605_1797321_-\|terminase	terminase large subunit	A0A290GJW3	Caldibacillus_phage	1.7e-207	60.1
WP_002458438.1\|1797313_1797715_-	hypothetical protein	R9TQ46	Paenibacillus_phage	1.4e-27	59.3
WP_002458439.1\|1797835_1798192_-	HNH endonuclease	A0A2K9VBV6	Staphylococcus_phage	1.3e-21	53.6
WP_002458440.1\|1798246_1799089_-	hypothetical protein	NA	NA	NA	NA
WP_002484781.1\|1799116_1799617_-	positive control factor	A0A0S2MVE1	Bacillus_phage	3.5e-12	31.2
WP_002457319.1\|1799791_1800016_+	hypothetical protein	NA	NA	NA	NA
WP_002457320.1\|1800686_1800986_-	hypothetical protein	NA	NA	NA	NA
WP_002504544.1\|1801036_1801384_-	hypothetical protein	NA	NA	NA	NA
WP_002457322.1\|1801389_1802292_-	DnaD domain protein	A0A1P8L6F0	Staphylococcus_phage	2.5e-53	52.8
WP_002457323.1\|1802321_1802717_-	single-stranded DNA-binding protein	Q4ZAD5	Staphylococcus_virus	4.1e-32	51.4
WP_002457324.1\|1802730_1802997_-	hypothetical protein	A0A2H4JAK6	uncultured_Caudovirales_phage	6.2e-16	57.1
WP_002457325.1\|1803059_1803251_-	DUF1270 family protein	NA	NA	NA	NA
WP_002457326.1\|1803265_1803475_-	hypothetical protein	A0A2H4JFX1	uncultured_Caudovirales_phage	1.3e-21	68.1
WP_002457327.1\|1803540_1803744_+	hypothetical protein	NA	NA	NA	NA
WP_002457330.1\|1804073_1804352_-	hypothetical protein	NA	NA	NA	NA
WP_002457331.1\|1804379_1804616_-	DUF739 family protein	A0A2I6PDH8	Staphylococcus_phage	8.7e-30	83.3
WP_002457332.1\|1804780_1805131_+	helix-turn-helix domain-containing protein	R9QTP6	Staphylococcus_phage	3.4e-22	50.0
WP_002457333.1\|1805300_1805672_+	hypothetical protein	NA	NA	NA	NA
WP_002457334.1\|1805714_1806839_+\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	1.9e-34	29.0
1806914:1807036	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2044767 : 2053237

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831672.1\|2044767_2045334_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.0
WP_002504799.1\|2045333_2046365_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.8e-64	43.4
WP_001831721.1\|2046357_2047842_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.4e-45	31.9
WP_001831715.1\|2047820_2050010_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.7e-140	40.4
WP_001831727.1\|2050002_2050674_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_001831728.1\|2050675_2050936_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_001831723.1\|2050935_2051640_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	1.6e-47	42.5
WP_001831674.1\|2051640_2052768_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001831735.1\|2052754_2053237_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-21	43.3

DBSCAN-SWA_8

2084575 : 2127517

uncultured_Caudovirales_phage(62.86%)

terminase,head,capsid,integrase,tail,protease,portal,holin

attL 2082854:2082870|attR 2135612:2135628

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2082854:2082870	attL	NA	NA	NA	NA
WP_049375131.1\|2084575_2085970_-	hypothetical protein	A0A1W6JPH3	Staphylococcus_phage	9.7e-60	36.5
WP_053093279.1\|2086070_2087489_-	CHAP domain-containing protein	A0A2R3ZXN5	Staphylococcus_phage	1.5e-103	62.3
WP_064586278.1\|2087460_2087940_-\|holin	phage holin	U3PJ27	Staphylococcus_phage	3.8e-40	60.6
WP_100481675.1\|2087999_2088398_-	YxeA family protein	A0A2H4JEL3	uncultured_Caudovirales_phage	1.0e-62	95.5
WP_100481676.1\|2088545_2088953_-	hypothetical protein	A0A2H4JCJ5	uncultured_Caudovirales_phage	5.3e-67	96.3
WP_002456415.1\|2088939_2089365_-	hypothetical protein	A0A2H4JA87	uncultured_Caudovirales_phage	5.2e-73	99.3
WP_002500089.1\|2089361_2089985_-	hypothetical protein	A0A2H4JCU6	uncultured_Caudovirales_phage	3.3e-116	99.0
WP_100481677.1\|2089989_2091204_-	DUF2479 domain-containing protein	A0A2H4JA98	uncultured_Caudovirales_phage	1.4e-203	98.5
WP_100481678.1\|2091203_2093066_-	DUF2817 domain-containing protein	A0A2H4IYE0	uncultured_Caudovirales_phage	0.0e+00	99.4
WP_032603576.1\|2093247_2094816_-	peptidase	H9A128	Staphylococcus_phage	7.8e-300	98.7
WP_002468177.1\|2094816_2095650_-\|tail	phage tail family protein	A0A2H4J498	uncultured_Caudovirales_phage	2.8e-163	100.0
WP_154435976.1\|2095651_2100379_-\|tail	phage tail tape measure protein	A0A2H4JBT3	uncultured_Caudovirales_phage	0.0e+00	95.2
WP_002456407.1\|2100407_2100560_-	hypothetical protein	H9A123	Staphylococcus_phage	1.8e-20	100.0
WP_002504164.1\|2100592_2100955_-	hypothetical protein	H9A122	Staphylococcus_phage	3.3e-60	100.0
WP_100481680.1\|2101018_2101204_-	hypothetical protein	A0A2H4J420	uncultured_Caudovirales_phage	1.3e-25	98.4
WP_100481681.1\|2101222_2101852_-\|tail	phage tail protein	A0A2H4JCT8	uncultured_Caudovirales_phage	4.0e-114	100.0
WP_100481682.1\|2101864_2102269_-	hypothetical protein	A0A2H4J7K9	uncultured_Caudovirales_phage	1.9e-69	96.3
WP_080356004.1\|2102271_2102538_-	hypothetical protein	A0A2H4JFJ4	uncultured_Caudovirales_phage	2.4e-44	100.0
WP_100481683.1\|2102672_2103002_-	hypothetical protein	H9A117	Staphylococcus_phage	3.6e-58	98.2
WP_070840824.1\|2102991_2103333_-\|head,tail	phage gp6-like head-tail connector protein	H9A116	Staphylococcus_phage	3.2e-57	99.1
WP_100481684.1\|2103351_2104686_-\|capsid	phage major capsid protein	A0A2H4J4F8	uncultured_Caudovirales_phage	1.7e-191	97.1
WP_070731393.1\|2104726_2105284_-\|head,protease	HK97 family phage prohead protease	A0A2H4JBY8	uncultured_Caudovirales_phage	7.7e-101	97.8
WP_100481685.1\|2105273_2106506_-\|portal	phage portal protein	A0A2H4JCP4	uncultured_Caudovirales_phage	1.9e-232	99.3
WP_154435978.1\|2106492_2106702_-	hypothetical protein	A0A2H4J9T6	uncultured_Caudovirales_phage	2.4e-23	100.0
WP_100481686.1\|2106713_2108465_-\|terminase	terminase large subunit	H9A111	Staphylococcus_phage	0.0e+00	96.9
WP_002504173.1\|2108457_2108928_-\|terminase	phage terminase small subunit P27 family	H9A110	Staphylococcus_phage	2.7e-83	100.0
WP_100481687.1\|2109071_2109422_-	HNH endonuclease	A0A2H4J8X0	uncultured_Caudovirales_phage	7.0e-60	94.8
WP_002500106.1\|2110016_2110463_-	transcriptional regulator	A0A0N7GFI1	Staphylococcus_phage	1.6e-80	99.3
WP_002500107.1\|2110479_2110629_-	DUF1514 domain-containing protein	A0A0N9S034	Staphylococcus_phage	1.2e-16	100.0
WP_100481688.1\|2110628_2110796_-	regulator	A0A0N9SKK8	Staphylococcus_phage	1.3e-24	98.2
WP_100481689.1\|2110798_2110999_-	hypothetical protein	A0A2I6PF22	Staphylococcus_phage	1.9e-22	84.4
WP_100481690.1\|2111014_2111224_-	DUF1381 domain-containing protein	A0A2H4J2G4	uncultured_Caudovirales_phage	1.6e-19	71.0
WP_100481691.1\|2111223_2111481_-	hypothetical protein	A0A2H4J9D4	uncultured_Caudovirales_phage	7.0e-41	96.5
WP_100481692.1\|2111495_2111699_-	hypothetical protein	A0A0D3MVJ6	Staphylococcus_phage	9.8e-30	97.0
WP_002469479.1\|2111735_2112278_-	dUTP pyrophosphatase	I6SB33	Staphylococcus_virus	2.6e-93	96.7
WP_002469472.1\|2112270_2112450_-	DUF1024 family protein	A0A141VTT1	Staphylococcus_phage	4.4e-26	96.6
WP_002469448.1\|2112439_2112667_-	hypothetical protein	A0A2H4J7L0	uncultured_Caudovirales_phage	4.4e-31	89.3
WP_002469449.1\|2112673_2112931_-	hypothetical protein	A0A2H4J5D3	uncultured_Caudovirales_phage	8.6e-15	90.5
WP_002497592.1\|2112931_2113384_-	TIGR01671 domain-containing protein	A0A060ABA9	Staphylococcus_phage	1.8e-79	98.0
WP_002469488.1\|2113376_2113766_-	hypothetical protein	A1BU02	Staphylococcus_virus	1.1e-05	25.9
WP_002469474.1\|2113784_2113964_-	hypothetical protein	A0A2H4J7I6	uncultured_Caudovirales_phage	5.4e-24	93.2
WP_002497591.1\|2113950_2114148_-	hypothetical protein	A0A1W6JQJ2	Staphylococcus_phage	1.2e-24	87.7
WP_100481693.1\|2114144_2114825_-	hypothetical protein	A0A2H4J4C6	uncultured_Caudovirales_phage	9.0e-128	96.0
WP_002484753.1\|2114840_2115128_-	hypothetical protein	A0A1W6JPD4	Staphylococcus_phage	2.1e-46	98.9
WP_002484724.1\|2115117_2115570_-	DUF3310 domain-containing protein	A0A1W6JPA2	Staphylococcus_phage	1.9e-81	100.0
WP_002484760.1\|2115566_2115926_-	hypothetical protein	A0A1W6JPB9	Staphylococcus_phage	3.8e-61	96.6
WP_002484773.1\|2115926_2116118_-	hypothetical protein	A0A2H4JE06	uncultured_Caudovirales_phage	1.2e-26	96.8
WP_002484718.1\|2116117_2116492_-	hypothetical protein	A0A2H4JFL4	uncultured_Caudovirales_phage	3.3e-63	99.2
WP_002504785.1\|2116478_2116895_-	DUF1064 domain-containing protein	A0A2H4J4B5	uncultured_Caudovirales_phage	1.9e-75	99.3
WP_002456377.1\|2116905_2117130_-	DUF3269 family protein	A0A2H4J7T2	uncultured_Caudovirales_phage	3.2e-34	100.0
WP_002504786.1\|2117098_2117329_-	hypothetical protein	A0A2H4J4C5	uncultured_Caudovirales_phage	1.1e-37	100.0
WP_002504787.1\|2117325_2118573_-	AAA family ATPase	A0A2H4J440	uncultured_Caudovirales_phage	2.3e-230	99.5
WP_002504788.1\|2118562_2118916_-	hypothetical protein	A0A2H4J445	uncultured_Caudovirales_phage	1.2e-51	100.0
WP_002504789.1\|2118921_2119650_-	DnaD domain protein	A0A2H4JC54	uncultured_Caudovirales_phage	4.5e-109	97.9
WP_002504790.1\|2119636_2119852_-	helix-turn-helix transcriptional regulator	Q4ZC20	Staphylococcus_virus	5.5e-23	77.9
WP_002504791.1\|2119857_2120088_-	helix-turn-helix transcriptional regulator	A0A2H4J4G1	uncultured_Caudovirales_phage	6.1e-36	98.7
WP_002504792.1\|2120065_2120755_-	hypothetical protein	A0A2H4J4H1	uncultured_Caudovirales_phage	3.0e-131	98.3
WP_002497586.1\|2120768_2121185_-	single-stranded DNA-binding protein	A0A2H4J3J7	uncultured_Caudovirales_phage	4.3e-72	99.3
WP_064658663.1\|2121184_2121832_-	single-stranded DNA-binding protein	A0A2H4J7J4	uncultured_Caudovirales_phage	1.8e-117	99.5
WP_002495408.1\|2121824_2122052_-	DUF2483 domain-containing protein	H9A0Y6	Staphylococcus_phage	4.2e-29	88.0
WP_100481694.1\|2122023_2122299_-	chordopoxvirus fusion protein	A0A2H4J6V3	uncultured_Caudovirales_phage	5.1e-13	100.0
WP_002484728.1\|2122624_2122903_+	hypothetical protein	A0A2H4JB42	uncultured_Caudovirales_phage	1.7e-48	100.0
WP_001830281.1\|2123049_2123259_-	hypothetical protein	A0A2H4J7I0	uncultured_Caudovirales_phage	9.7e-33	100.0
WP_002504197.1\|2123271_2124012_-	phage repressor protein	A0A2H4J436	uncultured_Caudovirales_phage	2.0e-133	97.6
WP_002504198.1\|2124061_2124286_+	hypothetical protein	A0A2H4JDC2	uncultured_Caudovirales_phage	1.5e-34	98.6
WP_100481695.1\|2124462_2124675_-	helix-turn-helix transcriptional regulator	A0A2H4J3K6	uncultured_Caudovirales_phage	1.9e-31	98.6
WP_002504199.1\|2124827_2125142_+	helix-turn-helix transcriptional regulator	A0A2H4JCJ2	uncultured_Caudovirales_phage	9.8e-53	100.0
WP_002504200.1\|2125163_2125622_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4J5R5	uncultured_Caudovirales_phage	2.8e-85	100.0
WP_002504201.1\|2125639_2126308_+	hypothetical protein	A0A2H4J6W0	uncultured_Caudovirales_phage	2.5e-66	100.0
WP_100481696.1\|2126467_2127517_+\|integrase	site-specific integrase	I6SMN0	Staphylococcus_virus	9.8e-198	99.7
2135612:2135628	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2329241 : 2343062

uncultured_Caudovirales_phage(60.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001105991.1\|2329241_2329916_-\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.8e-128	99.6
WP_002484625.1\|2330088_2331021_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_002484624.1\|2331042_2331357_+	hypothetical protein	NA	NA	NA	NA
WP_001829596.1\|2332628_2333408_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-18	33.6
WP_002438903.1\|2333404_2334364_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	4.1e-17	100.0
WP_002438902.1\|2334347_2335322_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	5.9e-165	99.7
WP_002456931.1\|2335337_2335601_-	hypothetical protein	A0A2H4IYB4	uncultured_Caudovirales_phage	5.5e-17	100.0
WP_002503605.1\|2335575_2336544_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	2.5e-184	99.7
WP_001829582.1\|2336662_2338768_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	100.0
WP_001829589.1\|2338730_2339129_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.0e-71	100.0
WP_001829684.1\|2339883_2340759_+	DMT family transporter	NA	NA	NA	NA
WP_001832596.1\|2340772_2341273_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-50	70.1
WP_002438897.1\|2341556_2343062_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.5e-61	34.0

DBSCAN-SWA_10

2364490 : 2375026

Staphylococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830323.1\|2364490_2365642_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	7.5e-26	39.6
WP_001830349.1\|2365631_2366219_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_001830328.1\|2366515_2367187_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	4.1e-64	55.7
WP_001830341.1\|2367191_2367611_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_001830330.1\|2367611_2368325_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.6e-55	44.8
WP_001830331.1\|2368427_2369027_+	hypothetical protein	NA	NA	NA	NA
WP_001830315.1\|2369376_2369532_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	9.8e-14	75.5
WP_010959136.1\|2369623_2369722_-	hypothetical protein	NA	NA	NA	NA
WP_001830329.1\|2370127_2370565_+	hypothetical protein	NA	NA	NA	NA
WP_001830332.1\|2370615_2371089_+	DoxX family protein	NA	NA	NA	NA
WP_001830352.1\|2371063_2371753_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-34	35.2
WP_002438881.1\|2371842_2372808_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	1.8e-17	30.6
WP_001830351.1\|2372877_2373984_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	6.3e-62	43.2
WP_011082622.1\|2373952_2374045_-	hypothetical protein	NA	NA	NA	NA
WP_001830355.1\|2374186_2375026_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-60	43.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045648

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection