CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP021875	Desulfosarcina widdelii strain PP31	4 crisprs	WYL,DinG,RT,DEDDh,cas3,csa3,Cas9_archaeal,PrimPol	0	0	10	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP021875_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021875_1

1628064-1628200

Orphan

Consensus_repeat	Method
TTGTCCTTGTAATCGCCGACACCGTCGCCGTCACTGTCCAGCGGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021875_1

>merge|NZ_AP021875|1|1628064-1628200|CRISPRCasFinder
TTGTCCTTGTAATCGCCGACACCGTCGCCGTCACTGTCCAGCGGGCAACCATCGGCATCCACGTCCACCCCGGCGGGCGTTCCCGGACACTTGTCCTTGTAATCGCCGACACCGTCGCCGTCACTGTCCAGCGGGCA

>NZ_AP021875|1|1|1628064-1628200|CRISPRCasFinder
TTGTCCTTGTAATCGCCGACACCGTCGCCGTCACTGTCCAGCGGGCA	ACCATCGGCATCCACGTCCACCCCGGCGGGCGTTCCCGGACAC
TTGTCCTTGTAATCGCCGACACCGTCGCCGTCACTGTCCAGCGGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021875.1\|WP_155303171.1\|1629450_1630437_+\|KpsF/GutQ-family-sugar-phosphate-isomerase	unknown	unknown	gnl\|CDD\|182814
NZ_AP021875.1\|WP_155303161.1\|1618598_1620323_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225098
NZ_AP021875.1\|WP_170302184.1\|1626900_1627452_-\|DUF2959-family-protein	unknown	unknown	gnl\|CDD\|378580
NZ_AP021875.1\|WP_155303177.1\|1637766_1638180_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155303162.1\|1620265_1621279_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_AP021875.1\|WP_155303172.1\|1630472_1631804_+\|ATP-dependent-6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235869
NZ_AP021875.1\|WP_155303167.1\|1625541_1625820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155303164.1\|1621467_1621950_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377190
NZ_AP021875.1\|WP_170302185.1\|1633148_1635143_-\|penicillin-binding-protein-activator	unknown	unknown	gnl\|CDD\|380562
NZ_AP021875.1\|WP_155307941.1\|1616145_1618602_+\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
NZ_AP021875.1\|WP_155303168.1\|1625985_1626804_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|182386
NZ_AP021875.1\|WP_155303163.1\|1621275_1621443_+\|desulfoferrodoxin-FeS4-iron-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273011
NZ_AP021875.1\|WP_155303165.1\|1622045_1623845_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
NZ_AP021875.1\|WP_155303175.1\|1635507_1636026_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155303179.1\|1638655_1639471_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_AP021875.1\|WP_155303166.1\|1623887_1625204_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181512
NZ_AP021875.1\|WP_155303173.1\|1631820_1633152_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|235589
NZ_AP021875.1\|WP_155303180.1\|1639455_1639980_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_AP021875.1\|WP_155303178.1\|1638279_1638564_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155303176.1\|1636185_1637469_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459

Protein	Function_ID	Function_description	E-value
NZ_AP021875.1\|WP_155303171.1\|1629450_1630437_+\|KpsF/GutQ-family-sugar-phosphate-isomerase	gnl\|CDD\|182814	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD.	4.59914e-106
NZ_AP021875.1\|WP_155303161.1\|1618598_1620323_+\|AAA-family-ATPase	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	1.1536e-95
NZ_AP021875.1\|WP_170302184.1\|1626900_1627452_-\|DUF2959-family-protein	gnl\|CDD\|378580	pfam11172, DUF2959, Protein of unknown function (DUF2959). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	4.54848e-72
NZ_AP021875.1\|WP_155303162.1\|1620265_1621279_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	1.00251e-18
NZ_AP021875.1\|WP_155303172.1\|1630472_1631804_+\|ATP-dependent-6-phosphofructokinase	gnl\|CDD\|235869	PRK06830, PRK06830, ATP-dependent 6-phosphofructokinase.	0
NZ_AP021875.1\|WP_155303164.1\|1621467_1621950_-\|hypothetical-protein	gnl\|CDD\|377190	pfam04008, Adenosine_kin, Adenosine specific kinase. The structure of a member of this family from the hyperthermophilic archaeon Pyrobaculum aerophilum contains a modified histidine residue which is interpreted as stable phosphorylation. In vitro binding studies confirmed that adenosine and AMP but not ADP or ATP bind to the protein.	7.94873e-109
NZ_AP021875.1\|WP_170302185.1\|1633148_1635143_-\|penicillin-binding-protein-activator	gnl\|CDD\|380562	cd06339, PBP1_YraM_LppC_lipoprotein-like, periplasmic binding component of lipoprotein LppC, an immunodominant antigen. This subgroup includes periplasmic binding component of lipoprotein LppC, an immunodominant antigen, whose molecular function is not characterized. Members of this subgroup are predicted to be involved in transport of lipid compounds, and they are sequence similar to the family of ABC-type hydrophobic amino acid transporters (HAAT).	1.27796e-68
NZ_AP021875.1\|WP_155307941.1\|1616145_1618602_+\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_AP021875.1\|WP_155303168.1\|1625985_1626804_-\|mechanosensitive-ion-channel	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	4.66917e-86
NZ_AP021875.1\|WP_155303163.1\|1621275_1621443_+\|desulfoferrodoxin-FeS4-iron-binding-domain-containing-protein	gnl\|CDD\|273011	TIGR00320, Desulfoferrodoxin_homolog, desulfoferrodoxin. The short N-terminal domain contains four conserved Cys for binding of a ferric iron atom, and is homologous to the small protein desulforedoxin; this domain may also be responsible for dimerization. The remainder of the molecule binds a ferrous iron atom and is similar to neelaredoxin, a monomeric blue non-heme iron protein. The homolog from Treponema pallidum scores between the trusted cutoff for orthology and the noise cutoff. Although essentially a full length homolog, it lacks three of the four Cys residues in the N-terminal domain; the domain may have lost ferric binding ability but may have some conserved structural role such as dimerization, or some new function. This protein is described in some articles as rubredoxin oxidoreductase (rbo), and its gene shares an operon with the rubredoxin gene in Desulfovibrio vulgaris Hildenborough. [Energy metabolism, Electron transport].	1.18122e-10
NZ_AP021875.1\|WP_155303165.1\|1622045_1623845_-\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	9.04638e-122
NZ_AP021875.1\|WP_155303179.1\|1638655_1639471_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	6.67766e-120
NZ_AP021875.1\|WP_155303166.1\|1623887_1625204_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181512	PRK08637, PRK08637, hypothetical protein; Provisional.	0
NZ_AP021875.1\|WP_155303173.1\|1631820_1633152_-\|glycosyltransferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	4.09818e-119
NZ_AP021875.1\|WP_155303180.1\|1639455_1639980_-\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	3.23342e-26
NZ_AP021875.1\|WP_155303176.1\|1636185_1637469_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	2.0669e-22

>NZ_AP021875.1|WP_170302184.1|1626900_1627452_-|DUF2959-family-protein
MGKEKRHLLKDNVEKAREEQADASEQFSSVVERIKAMYGFEGGDLEAIYDKLSSDYRACEERADAVRDRIDKVERIGADLFQEWESEIATIENAKFRAKSRASLQDTRTRFARLQRSMTRVEASMDPVLRNLRDYVLYLKHNLNAQAVDSLKREVADIEAEVASLIADMKRSIQEADAFIENM
>NZ_AP021875.1|WP_155303168.1|1625985_1626804_-|mechanosensitive-ion-channel
MEDILNKIYQLLTVYGIKVLAAIAIFVIGRWVAKGVRKLVERVMSKSKVDSTLISFTANLVYIALLAFIVVAALGQLGIQTTSFIAILGAAGLAIGLALQGSLSNFAAGFLLIIFRPFKVGDLIEGAGVFGVVEAIQIFTTQLKTADNKTVIVPNARLTDDNIVNWTVKGTRRVDLVMGIGYEDDIDKARSIMADIIAADSRVLKDPAPQIAVSELGDSSVNFVVRPWTRVEDYWAVYFDLTEKIKKAFDANGVSIPFPQRDVHVYQHSEGE
>NZ_AP021875.1|WP_155303167.1|1625541_1625820_-|hypothetical-protein
MRCTTIREGMECAFMTAKGCGYKGGVCHEIVEQCKGCSRTVEVSSGWYCAACPEPDTKWKHGNCNLATHVSNSMAESTQKINPLKASKRSRK
>NZ_AP021875.1|WP_155303166.1|1623887_1625204_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MNPLAEQLNQTLKASAPHVYDMLSDVGRKLFFPKGILSQSAEAREKAHTINATIGIAKENGRTMVLDTVMDSIAHIRPSQSLTYAPSFGLLELRQQWQKEIFEKNPSLAGKTVSLPVVTCGITHGIATFADVWTNPGDVIILPQMMWGNYSMIFSVRKDARIRHYQLFSAEGGFNLPAFEQAVRQEAAENRKITVLLNFPQNPSGYTITEAEADAIVAILTDIAAGGTYVLAVTDDAYFGLFYETQTLKESIFARLCGAHPGILAVKLDGATKENYVWGLRVGFITYGGTFTGDTGPLFDALERKTAGCIRGTLSNASHLSQTILLKSMQDERNIAEKKAKFDILKDRAERVKAVSTDPKYAAAWEVYPFNSGYFMCIRLKTVDAEALRVHLLDRYGVGLISLGASNLRIAFSCMEAGDVEKLFDTIYNGIQELENSQ
>NZ_AP021875.1|WP_155303165.1|1622045_1623845_-|chloride-channel-protein
MKDKLARLNVAQATRWSFYFVAIGLIAGLGSIAFHYLCQLGIHYFLDMAAGYRPPPPAGEHHLLPSTSVPFNRWMLLILPALGGILSGWLVYTFAPEAEGHGTDAAINSYHNKGGFIRGRVPFVKTIASAITLTTGGSGGREGPIAQIGAGFGSFLATKLKLSDRERRIMMAAGVGAGVGSIFRAPLAGALFAAEVLYRDPDFESEVIIPAGISSVVAYCVFCLRFGWGSLFSSPPFNFQNPLELGPYLVLALVLVITGIFYVKTFYGTIHLFESIKKIPNHIKPAIGGLLTGIVGFFLPHTLAFGYGFAQKAIDNELAIPFLISLALGKVLTTSFSIGSGGSGGVFGPSIVIGGAMGGVVGQIFHAIMPTVVTEPGAFVVVGMAGFFTAVSNTPISTIIFVSEMTNSYHLLLPSLLVCSVAYLASRRYTIFHRQVQSKVDSPAHAGDFFVDILQTFRVNDLMPLVQKVSLIPQDMPFVAFKRYFSETKQHYFPVMDEEKRLVGIFSINDIRGVLFAPEIEQLVVMKDVGTSDIILTTPEEDLNTVLKKFTTRNIDSLPVVRADDHGILLGMLNRREVITFYNQKVDEMKSRRQAFSEN
>NZ_AP021875.1|WP_155303164.1|1621467_1621950_-|hypothetical-protein
MDLKTVAVENPESLNFILGQSHFIKTVEDLYEAIVTTVPGAKFGLAFCEASDVCLVRHAGTDEKLIELAQKNALNLSAGHSFIIFMRDMFPVNILNSVKNVPEVCRVFCATANPVEVIVAETDLGRGILGVIDGFASKGIEDESDIVKRKSLLRAIGYKL
>NZ_AP021875.1|WP_155303163.1|1621275_1621443_+|desulfoferrodoxin-FeS4-iron-binding-domain-containing-protein
MTKESQVFKCTVCGTIVAVIAGGKGDLVCCDQKMVEVTPSDAKKLIHGMVRPGTP
>NZ_AP021875.1|WP_155303162.1|1620265_1621279_+|universal-stress-protein
MFNRILAATDIATTPDAPVVTAARLARGHHARLYLLHVMESASTENRKLIRHYETDAEMIADAAYEQTVAQVLRRTFRDSIPGEETEVRVTAGFPWEEILQYARQIDADLIVLGPHSTRAQEKGVVRIAGLVGSTVENVMIRETCPVMVVNRPANAEQLRFRRVLIPVDFSRSCECAVCFAARLAANCHSQLQIFHMIPVPPVPKYNRSAYNRDKASALKRLESLYRPYLDGIEHRYIIHAGSLPHLEILNAARDQNSDLIVMGSHTKETGGKWYPGSAVERVGFRASCPLVTITDPQVLIHWKGRLTDTVSKEPDRRIHVFTGTGSHPSPKKGGMS
>NZ_AP021875.1|WP_155303161.1|1618598_1620323_+|AAA-family-ATPase
MTAHHQTAILEAMMQSGFYPHPAPSIQRQETHISTVFLTGRWVYKIKKPVDLGFLDFSTLEKRRQYCRQEVALNRRLSEGVYIGVVPITRHNGCYALNGPGETVEVAVKMHQLNESDVMADHLRRGALTGRHIEMLVDRLVDFYAHTAADCEMDPTQAPAWEMNLQEVDRFAGAWIDRRSFDFVRAATQSFVRTRGSLFRRRRESRKIKDGHGDLRTDHIYFSANGIQVIDCIEFSPHLRCLDVVSDLAFLSMDLEFLGFPDQARNLIRLYVSQADDLEALPLLDFYRCYRAMVRCKVSCYCIEKGGLTDTTRKALVQTAGRYLALARSYTEAFSQPTLWMVGGLPASGKSTVAKALARAHDICVIRSDAVRKAHFADGPERSGTTAFEQGIYKAGATEATYNRMAAMAAENLKKGCSVILDATFSRQVHRDQALRVAQYHHAMPIFVECHAADALLSERLKRRDTEPSLSDARLVHLKAFKKRFEPVDTIGGVGAHIRVDTARPVRECLHRILLSNALTSSRRRKTEATPAMCDRRIPSVLRTGALSQPTQRRLICSTASWRRPISLPHPTHR
>NZ_AP021875.1|WP_155307941.1|1616145_1618602_+|endopeptidase-La
MEETPLKKNERNAILKQIPREVGILPLRDVVAYPYMVLPLAVAIPALIKLIEDAVDGSQMIGLITTKEPGVDMPSPWQVHEVGTVAHIHRAVKTPGNHLHVIVQGIERFRVNVWRRTDPYLQARIELSPERIEEGIELDALKRRLQFLAREVVTLMPNVPEDAGSFLENIEDPRYLAYLVAANSRIKAPTSQKILEIDDLNDKLRALISLLSREKEVLSLDHKIQAEAHEEIGRAQRDYYLRQQLKAIQKELGEESEVEDEIAEYEEKLKKATLPAEALEEARRELRRLKGMHPSSAEHSVIKTYLNWLVELPWNTLSDDCMDIPHVRVILNEDHYDLEDVKDRLIEYLAVKKLVRERQDPADSGEKEEYAQMTGTLLCFVGPPGVGKTSLGQSIARALGRRFTRMSLGGIRDEAEIRGHRRTYIGAMPGRIIQAIRRAGTRNPVFMLDEIDKVGSDWRGDPSSALLEVLDPAQNHAFRDHYLDVDFDLSEIMFITTANQLETIPPPLQDRMETIALEGYTEHEKMHIARNHLVPRQMKANGLRPEEIRFDDAALACIIRDYTREAGVRNLERRIAAVCRKTAVDISSGVPGVPGITPKRVRELLKKPLFESELSESVDIPGIATGLSVTAYGGEILFIEATCIPGKGELTITGHLGDVMMESARIAHSYVRSKAGELDIEVKRFKATDTHLHVPAGAIPKDGPSAGLAMVLAMASVYTGRPVHSDMGFTGEVTLRGRVLAVGGIKTKVLAAHRAGLRSVILPQCNERDLDELPSEVKGEVEIRLVDRVEDAIKIALLPPEITSAGCDEAVSKPKEAG
>NZ_AP021875.1|WP_155303171.1|1629450_1630437_+|KpsF/GutQ-family-sugar-phosphate-isomerase
MIIEEARKVLQIEADGIVKLIDRLDKEFEAMVAVILNATGRVIVSGIGKSGIIARKISATLNSTGTRSLFLHPVEAMHGDLGMVSPDDVVLAMSYSGETHELNLMIPTIRNLGCKVIAMTGNRSSTLAKQSDIVIDVGVEKEACPLGLAPTASTTALLAMGDALAVVLINKKHFKTSDFKRFHPGGALGHRLSSQVKDIMMTGKAVPSVPISASMQEAVGEMDRHGLGALIVVDENRRLAGIFTDGDLRRIIARQETVFEQSLSSVMTPSPLHAFSRTPAYDALNIMERHEITVLPIVDGKHRVKGILHLHDILGKGEFTFNGHEPEK
>NZ_AP021875.1|WP_155303172.1|1630472_1631804_+|ATP-dependent-6-phosphofructokinase
MNQDPIQTHIQTLGEAKIPSPMLDEKRGGVHHLFVSDEDRIMINIRRADIQAMVDQGVDLPSFELAGPRRKVYFDASKLRCAIATCGGLCPGLNDIIRAIVLELHYRYGVKNIYGALYGLEGFIPEYNHDFLDLTPARVTAIMNMGGSILGSSRGAQDIERVVDCLEVNNIGMLFMVGGDGTLMAASKIAETISERGLKISVVGIPKTIDNDIHLVSRSFGFDTAVDVSRMAIQGAHNEATAYPNGVGLIKLMGRHSGFIAATAALAQQDANFVLIPEVDFDLDGPKGLLAALEARIVSRGHAVIVVAEGAGQKFFEEVDERRDASGNIRLNDIGIFLRDTIKAYFSQKNIPLNIKYIDPSYMIRSVPANANDSVFCGFLGRDAVHAGMSGKTKLVIGHWNNHFVHLPMEATAGRRKQVRPNGKLWTTVLESTGQPSLQNDSA
>NZ_AP021875.1|WP_155303173.1|1631820_1633152_-|glycosyltransferase
MKIFQFAYNLASFCLAPAVLPVLWYHERRDPERRTAMLQRLGYDDPNPLASNRPAGPVIWIHAVSVGEVKAAEAVIHALNDASSDLSFVLTTTTMTGQRHARNRFGSALRIRYAPLDLWWTTDRFLTLHRPDVLVCMETEIWPNWITLAHRKGIKILFLNGRISSRSIRSYKRIRPLIAPILQKVDAFSMISESDARRIVHLGAPANRVRINGNAKMDAPGVDDDTATLKKLKALYAIDDKTPVFVAGSIRGVEVEILMDVYDRLACRIPELVFIVAPRHIQNAPRIAACARSRAVRWQYRTDLEKNQAKRAAPVVILDTIGELRHVYRFASVVFCGGSLVPLGGQNVLEPAMCGKPVLFGPFMEDFQDASALLEASGGGVCVQNGQALAERAGDLLAHADNARRMGRRAKQAVLANRGAARRHAKVVADMLNLPYRLDLSPG
>NZ_AP021875.1|WP_170302185.1|1633148_1635143_-|penicillin-binding-protein-activator
MPEHADFQAAERTFEEGRYDEALELYNKFLEKSEPNLFTEMALFKVAKIYRHTGRDEEALSVLTQLTRDFPESVLVPDATLELLDILYANGKYEAVIARGSAFTGTTDPNLARMPFFLMIGDAYESLGAHMDAARFYYRAWNTAIGPQRKAAWPKLESAAGQLNVEEIQRLISELKDREVTGLLLYRLGMAFIMDENYDDAFDVLEMFVNRFPDHPDHQDAADMILSLEERSRFTPFTVGCLLPLSGPYAVFGQRALNGIELALNRTGEMADGIPFHIIVKDSRSDAGVTAEAIEQLDRQKVGTILGPMSAAEAAGKYAQTRGIPIVVFTQREEVPDVGSYVFRNFITPQMQVRSLVTFAAENLGARRFAILYPDEKYGWRYMNLFWDQVVENGGTVNAVEAYDPSGTDFAEPIKKMTGLFYEIPVDLKQQSMPSPLPMTLASMADGYLQDPIAAIDPVERVCGVPLDREALDDLGRRNADRDDRWDPIVDFDAVFIPDAPKKAGLVIPQLAYYDIRDIYLLGTNLWNSKTLLEMSGEYMKNTLIADAFFTESSSEAVQTFVADFKEAFGKVPGVIEALAYDSAMMVFSTMRQTATDSRRELKQALLQMEPFKGVTGPTRFQPNGEVEKALQMLRIEKGRFVQAQPTLSLESDSSDSDTPLLQP
>NZ_AP021875.1|WP_155303175.1|1635507_1636026_+|hypothetical-protein
MKKTILAIFSILLGLLFAAYSNAEIYKYLDENGQKRWTDDLSQVPVEQRDSADRMDTEATFETPSDRASDEAAPSEPAEKMEEATSDTDEPNRGALEKEKADLDTMYQELLQERQQIEKAKAEAKGAQAKGALGKRISAYNEKAEKYEERLKAFNKNVNEYNQRIQSATKNE
>NZ_AP021875.1|WP_155303176.1|1636185_1637469_+|class-II-fructose-bisphosphate-aldolase
MTTSSSDFSKALSVGRPPNIQRLFPNSKALLVSGKFIDLGMIKKANAICMAANGRNTFVIRGALRAAQRANSALIIEIARSEGGAGAYCATNYWNMARIVDAVCNELGITVPVAVHADHYGIKSKDDIPQAKIEIPTLFEAGLTSIAVDASHLPDDQNLLTNLELKPLIPDWAGLETEIGEIKGKEGLSTKDEALFLIQGLNANGIFPNWIALNNGSVHGLEASGQGIQVDLTKEIHEALMPYNVSGAQHGTSGNSSHRLREIANETRTTKANVATALQMISWGLEVNDDGNAALDEDGNFIKIEGQGVSEAMWMQMVAYADEKGWKGGNYKKLNLPFETKLMGLPKEIRQRMEDRVESFVYNMLVNVFNAQDSADLTIESILEADGFDPGPKARRIEDPQEWTPEKIAQRAALLETNEGPEGDFDD
>NZ_AP021875.1|WP_155303177.1|1637766_1638180_+|hypothetical-protein
MLIQSYQIHNVLNVYRRQLSQAKPNQAGNSGSRNTGSDTVQISVEGKSQSIMEKVADNVLKKITNVEPGYDFGQELADQVRSDADYASVVEKDNRFVFNTIEGDNQKETRSIAVDDSQVLMDRLNELAKAAVDRKGQ
>NZ_AP021875.1|WP_155303178.1|1638279_1638564_+|hypothetical-protein
MLNTIGESVVRTTTRADNNLALENRDVTLEKTEKVVEERPVENSDESAKSEPEGDRKSGGYDVDDKGVYFEKYDEKGNVVYRIPPEQKPIDELA
>NZ_AP021875.1|WP_155303179.1|1638655_1639471_-|nucleoside-triphosphate-pyrophosphohydrolase
MAKSLNPSGPTSFDRLLALIETLRGENGCPWDRKQTPSTVTRYLIEEVYELVDAVLSGNPDDVCDEAGDVLFQVLFVIHLFSESGHFCIQDVIEKNIHKMVRRHPHVFGDVSAKTPEKVSENWDRIKQSEKNGKEQPSLLNSIPKGLPALARAAMVSERAAKTGFDWDDISGVMAKAMEEWAEFSTELGAADGAGESDTASMEFGDVLFTMVNVARFAHIHPETALIRSIQKFEDRFRYMEAKATEAGRDMDGLTFDEMHVLWDEAKVKFC
>NZ_AP021875.1|WP_155303180.1|1639455_1639980_-|CvpA-family-protein
MNPFDILVLAILAYGVIRGIFRGLVRELASIVGVLGGFYAAYTYYPYMTKLISPWITSTSYLNIVSYMILFIVVVVIVGILAVVIKYLLNIAYLGWVDRVSGALFGGVKAALIVSVLFIVLTAFLPKGAPFIRDAASSPTVATVSEVMAKVISKDMKSKFTLKIKALHTSWQNR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP021875_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021875_2

3413743-3413859

Orphan

Consensus_repeat	Method
AAAACCTGTATCACTCCGATACGGGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021875_2

>merge|NZ_AP021875|2|3413743-3413859|CRISPRCasFinder
GGTAGGTGGATCGCTCCGATACAGGTTCGCGAAAACCTGTATCACTCCGATACGGGTTTTGCCTTCGTTCCCGAAGTCCGTTCCCGGATAAAACCTGTATCGCTCCGATACGGGTTT

>NZ_AP021875|2|2|3413743-3413859|CRISPRCasFinder
GGTAGGTGGATCGCTCCGATACAGGTTC	GCGAAAACCTGTATCACTCCGATACGGGTTTTGCCTTCGTTCCCGAAGTCCGTTCCCGGAT
AAAACCTGTATCGCTCCGATACGGGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021875.1\|WP_155304682.1\|3420790_3421321_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304679.1\|3418972_3419743_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304671.1\|3411739_3412342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304685.1\|3422830_3424285_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|223545
NZ_AP021875.1\|WP_155304674.1\|3412945_3413167_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_AP021875.1\|WP_155304673.1\|3412670_3412853_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304668.1\|3409078_3409504_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304678.1\|3417830_3418991_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304684.1\|3422265_3422586_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304683.1\|3421403_3421886_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP021875.1\|WP_155304680.1\|3419861_3420092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155302183.1\|3414621_3415980_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_AP021875.1\|WP_155304669.1\|3409895_3410123_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304672.1\|3412341_3412674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304667.1\|3407559_3409104_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_AP021875.1\|WP_155304666.1\|3406387_3407155_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_AP021875.1\|WP_155304681.1\|3420299_3420734_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_AP021875.1\|WP_155304677.1\|3416731_3417829_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_AP021875.1\|WP_155304670.1\|3410526_3411045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155304675.1\|3413163_3413553_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP021875.1\|WP_155304674.1\|3412945_3413167_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	2.65461e-06
NZ_AP021875.1\|WP_155304685.1\|3422830_3424285_+\|pyruvate-kinase	gnl\|CDD\|223545	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism].	8.17738e-178
NZ_AP021875.1\|WP_155304681.1\|3420299_3420734_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.3491e-17
NZ_AP021875.1\|WP_155304667.1\|3407559_3409104_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	2.04251e-45
NZ_AP021875.1\|WP_155302183.1\|3414621_3415980_-\|ISNCY-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.03054e-08
NZ_AP021875.1\|WP_155304666.1\|3406387_3407155_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	2.58282e-27
NZ_AP021875.1\|WP_155304677.1\|3416731_3417829_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	1.2968e-10
NZ_AP021875.1\|WP_155304683.1\|3421403_3421886_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.81746e-14

>NZ_AP021875.1|WP_155304675.1|3413163_3413553_-|hypothetical-protein
MTISKNYGPEIIGIIESFEAFLQKIKEDVENNAPVKPPNEKHLLSELRQAIAKTAALNKPFTYSGRKSGLFGRRDELPPEFQAFTRKKLEALAKKLLDDGQVVKRPDWGMYQEKWLDVPGGALSKGRRR
>NZ_AP021875.1|WP_155304674.1|3412945_3413167_-|helix-turn-helix-domain-containing-protein
MKPNTIHKRQYWTPQQIMDLFGIGRTLAYDLIRDGELGPVIKVGGLRVHRGGIVQFIERKEAEMAAELDQRLL
>NZ_AP021875.1|WP_155304673.1|3412670_3412853_-|hypothetical-protein
MLVEHPVMKARQKMLSHWLQAIDEGRRDDEEKLLAAKRRLDDEIRRRLVSKVPRINGGIR
>NZ_AP021875.1|WP_155304672.1|3412341_3412674_-|hypothetical-protein
MKCFFESERRNAALYLQDRPACDCGHCVDCLLRRELSETAPQNEILKGNQKMSTENQNIAEKFKNGQSYLAEWNRDAKLRDEFEGDFEAYCHYQAAYSQGLIKGFGQGGR
>NZ_AP021875.1|WP_155304671.1|3411739_3412342_-|hypothetical-protein
MDRSTTDSVRNMTSFSFTGSAKSRAEKTSQTARLNGGYEEVVSIEGRIHDIDWNITRVEEKLGQAIVARRNCKLALKEEVKGSSEHNGITAESARLDKEIDVLNGKLKKLKDRRSVRSKELEKSLKLYQVSIDRDMGNAGRSNMVEKIRSAVADATDYGNTVYAELDGLEKKYGSKLVKSAREKIDSAFKVVTAVEKALR
>NZ_AP021875.1|WP_155304670.1|3410526_3411045_-|hypothetical-protein
MALMNMTEYGRHVGISRQRVSVLIQTGQISAAAITKKGKWTLIDPDMADDDLRRNLDPSKSVAVIPESEMRETIQAAGLGDQDPDYARSRALNEHYKAALKKLEYDAKSGDLIPRSEVEKDAFECARTTRDAMLNIPNRLAAVLSAESDQKKVETILRVEIRNALTALAESL
>NZ_AP021875.1|WP_155304669.1|3409895_3410123_-|hypothetical-protein
MEKREIGPNRRLRLRNRAILCRYGVGEKEADAVFDLELAGWTAERIAGLFRSASELVSMGMTADEVSALLDGAAV
>NZ_AP021875.1|WP_155304668.1|3409078_3409504_-|hypothetical-protein
MQTKVGRFPAYVPERSLFDTVLTILAKSLPQRGMKFSSPLSKIHEFFFNMKKDYPSLFEDVNFRQSPDYKYSKEIADCFIELQEAGFLTRPNPSLTMFRVDANFSEDESIEDKPEIETISKIAELFNQNFEIINDEQTQTC
>NZ_AP021875.1|WP_155304667.1|3407559_3409104_-|HD-domain-containing-protein
MMSKPKLVDEYSDHLTDLLKNFLLPKSKALKPGMKVIHDPLWGSRLFYPWEIALLDTPLCQRLRQIHQLGSAFLTYPSGVHNRFCHTLGVTILAGRLITRLKEKAEVQAVKDVGISNRDIYTVRLAGLLHDVGHCFLSHASEIALGPIVKPVMKEVEISAKPHEFFSYLIVSNPYFLEYWEKNIAGLFPDSESVPSLDDISKIIVGIPPSDDKRYLQDIIYGPYDVDKLEYLYRDARTAGLEITYDIERYFYKIHIFADDSGCRLAMEQGGVSAVEQMIFSKMMLFSFVYHHQKVLASDILVHDIVMELLHEKNDRIDIEHPTDFLKYTDYDLFSSCNVGTTDRYNKIRDKIKNRDLPKRCLVLNKESVVNLTTDYSVKKNWRRLLEDLRGLPSTRYELRKKIVAEMRSIDGCENFSIDDIYFSFPKAPSFDEAVHGPVMTFSGKIAPMGDFFDLEGWKTTYDLKKLKGYFFVTDKYIDIASRVISRFLEAEYSLVFNENAKIQAKVFDGSKAN
>NZ_AP021875.1|WP_155304666.1|3406387_3407155_+|N-acetylmuramoyl-L-alanine-amidase
MMDLCVKDSDLFTVSAKPQIAFVNVLALLAIGFLLSIAAVYGQAEPVLAATVVLDPGHGGNDEGAGSGSAFSEKRFTLALAQAVAAALPPKHRVELTRTADIDLAPADRAALANHLKADLMVSLHAAVAPYCSDPTAAVYVHNDERLVMPSGKTKAPDSDPPAWETLQIRHQQESQEVAEEIRMTLEASGSFDHVAVYKAPLIALMGADLPAVLLEVGCIHPTIALTKDQYEQQVKAYAGPIAAAIEMALDTLAP
>NZ_AP021875.1|WP_155302183.1|3414621_3415980_-|ISNCY-family-transposase
MREKWQKQMPLMPQIKDHAQAKELTAISGIIDAHPIICDRVLQDLNKGKLVAYRTGADGMSADQVLRCAIVKILFGFTYDELAFHIVDSQALSWFCRIGIADKGYKKSALNKNIKGISDATWELINADLLGYAKQKGIEKGRQVRVDCTCVETHIHHPTDSNLLWDGVRVLTRLLKRFRDESGITVPDFHNHTRVAKRRMLAVMNAKRKNKRKVAYVDLLKTSRKVVGYAHKAVAAINAGATCDPLVMTIGFQIEHFVDLTRRVIHQTERRVLHGETVDAKDKVVSLFEPHTDIIVKDRRDTLFGHKICLTGGASNLILDCVITEGNPADADLTIPMLERQKQIYGRYPLKASFDGGFASKENLKRAQSRKIKDVCFAKKRGLSETDMCRSQYVYRRLRRFRAGIESGISWLKRCLGLTRCTWKGWDSFKSYVWSSIVAANLLTIARGKTAT
>NZ_AP021875.1|WP_155304677.1|3416731_3417829_-|trypsin-like-peptidase-domain-containing-protein
MICRTCARNIFKTVLFAAVILLCIAKADVRADSALNSERRVKQAKKIVAMISGEFKDAPCVGTGIVFGAANNRLYIATARHIVRKDPNFSGESAVEDAHNIKVEFSQLPGEKFTAKLLSDYREAKETDLAVLVVTHAESLGLTRQLFPFAIIDENTDMAWGDSLHAITHEKGQKWSLNAIPFKFKKKRLADYEFEATNLPPGSSGGALFTTDLKLIGMIKRSNLNDGIALRIDSMTAILKNWGLPVSLRQWRAKDALGIKNTQIITLTKKSRFFHPDGLSFSACDICKETVVFCDRWVHELEDLKDKRVRIVSLKEADNPDILQEVVTAAGGKPFKIPFAELYPSLEKGVIQCVMTDVQYIDRLP
>NZ_AP021875.1|WP_155304678.1|3417830_3418991_-|hypothetical-protein
MVFSRLKAKSHKNFNLCPIEQMVEKHLKQLCDNLSNGEKISDEQIERILNLKTICNTFNQKEDKRNPWFILTVFLSVLVIISALLFINVGDTRIDADLLLSGLSFSPISKSQIISSPIAIESASLSGIQRAFFPPQANQKILELSQPMLNFQHNSATPNSTANNIVLNKVVVAKEDTIELMREKDQWILKIYNQNNKPIKSEISLSIQGEIAVRYAEAESKMVYSDPVLPQFLWHPSGFKLQFMVSKGINDLVIEQLAIDYLSLSKRENLSETSHPVFSWRSSIVAGDLYLEELKGEKLSLRYGENLQLDLVSGTVRLVKTEAQHLRALFHGTTRELYLGEKANALNLMPTLLELAKSQKAMALLWFSSLYVFGIVYTAIKWWKGF
>NZ_AP021875.1|WP_155304679.1|3418972_3419743_-|hypothetical-protein
MKNNLFIQFAIFVVLFFQFIAVKPAASDTNCVRSLISPGENPLRYKERGGRCEGLYEKPKKGSLYLVSFCQPADSTLHERPESLPLKWSNQNSDPVHLSGYVLNYPYSDSYQMDKIMDKNPGKYNWPLGFIYALNIEAKEIGIVCRTILAKGNTEKEIYYPIKISSTVPNTYKLVFKSDYYLYDITYSLASVDQQSGFPIHYFHQSKPVAKFKGPDELIIINIEGGMQTGYYQFQINAFYGSDHLPTGEIIWFFHD
>NZ_AP021875.1|WP_155304680.1|3419861_3420092_+|hypothetical-protein
MADHTWASRGRHQSSKSKILNLKEKKSGHTFPFQKGSLDGSIKKSLVTGATRFWAERVSIGYWSEIDKSSCKIKGY
>NZ_AP021875.1|WP_155304681.1|3420299_3420734_+|MarR-family-transcriptional-regulator
MDFETDIIISLISRIREKANRFITAELSARKLNGLKPIHGDLLLALFTSDRPTMKELADRVDRTKSTVTNLVDKLVQLGFVVKTRDNEDSRVFHVSLTQEGKALKPHLIDISRKLIDRVYKDTPEEERKQVVRILKQINDRWPR
>NZ_AP021875.1|WP_155304682.1|3420790_3421321_+|hypothetical-protein
MTLIERLTRHEIKELICKCWMTHDAMWFANTLFTQGVDQANQLNRAAIKSMVDVEIGRFLKTMNLSRDQIKSFEGFKAFFQNVRELLIPDFMNVTIGFDAPDTIFWHFNEKGCFAYNGVKRLEVENQYRCGVLYRIQCWLTCLDIPFEMNPVLKNCLMAEQGRCQGHFKCSFNEQV
>NZ_AP021875.1|WP_155304683.1|3421403_3421886_-|GNAT-family-N-acetyltransferase
MGKIVIRKATSEDAGLILGFVKELAVYEKMENDVVATVDGLRESLLSEGASAKALIVSLDDEPVGYAVFFYNYSTWLGKNGLYLEDLYITRKHRGCGAGKAALRYLAKLAVDQGCGRFEWSVLDWNEPAIQFYRSIHATPQNDWVLYRLDGEALSDFAGS
>NZ_AP021875.1|WP_155304684.1|3422265_3422586_-|hypothetical-protein
MREYKRVRIEHPIIYTCMTSEGEIDRQGVGTALNISPNGMMVEASEAIHAKSVKIRASVGGGLNVETMAETVYCIPHTPNKYRTGFRLSATASEALRFTNEILKLY
>NZ_AP021875.1|WP_155304685.1|3422830_3424285_+|pyruvate-kinase
MNNFTKILATIGPATCQPETIRKLFDAGINAIRINMSHGDRSSQTEYIQNIRKLNDNFPILIDTKGPEIRTGKILNNAVDVGVGSTLRLIESETQMEPDTIPVDYPHLDEIPVGTRILFDDGLVESEVVKQEGNALFVRVINDGPIGTGKKVTIQGYRVQLPFLTERDKQDIQFAVEKKIRLMAVSFVRSADDIKSLKSYLAALGTTMMLFSKIETGEAVANLEEILEESDGIMVARGDLGVELPLQEVPEIQNRIIKQCNQAGKPVIVATQMLESMRENARPTRAEVNDVAHAILQGADAIMLSAETATGKYPIRSVEMMRLISNQYEKQVSGIIKKYRRKEEVGRTGIAQYIAKAAYHASEELGAKAILTPTESGFTARNVSRFKPKCPILASTRDSIVVQLLHLVWGVFPRLDIDATLDLNHYAMSYQLIEHYYKTGILSEQDRIIIISGSNLMTKRGTNLLEVYSVKDIIEDGLTGKSDA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP021875_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021875_3

4892763-4892839

Orphan

Consensus_repeat	Method
ATATGACTCTCTATTCCATAGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021875_3

>merge|NZ_AP021875|3|4892763-4892839|CRISPRCasFinder
ATATGACTCTCTATTCCATAGAGAGTCTATAAGTAGATAGTAGTTAATAGTTAATATGAGTCTCTATTCCATAGAGA

>NZ_AP021875|3|3|4892763-4892839|CRISPRCasFinder
ATATGACTCTCTATTCCATAGAGA	GTCTATAAGTAGATAGTAGTTAATAGTTA
ATATGAGTCTCTATTCCATAGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021875.1\|WP_155308113.1\|4899049_4899235_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155305903.1\|4889874_4890249_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155308112.1\|4891404_4892019_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271192
NZ_AP021875.1\|WP_155305913.1\|4901759_4902644_-\|DUF1848-family-protein	unknown	unknown	gnl\|CDD\|378091
NZ_AP021875.1\|WP_155308111.1\|4883940_4886634_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_AP021875.1\|WP_170302415.1\|4889208_4889871_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|272971
NZ_AP021875.1\|WP_155305907.1\|4896256_4896496_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271184
NZ_AP021875.1\|WP_155305904.1\|4890276_4891116_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|272971
NZ_AP021875.1\|WP_155305901.1\|4887807_4888578_-\|N-formylglutamate-amidohydrolase	unknown	unknown	gnl\|CDD\|377442
NZ_AP021875.1\|WP_155305908.1\|4896492_4897803_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271184
NZ_AP021875.1\|WP_155305912.1\|4900791_4901763_-\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|129820
NZ_AP021875.1\|WP_155305906.1\|4895419_4895935_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155305898.1\|4882684_4883590_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_AP021875.1\|WP_155305910.1\|4899429_4899834_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|237320
NZ_AP021875.1\|WP_155305900.1\|4886799_4887792_+\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|132934
NZ_AP021875.1\|WP_155305897.1\|4882058_4882670_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288934
NZ_AP021875.1\|WP_155305911.1\|4899830_4900769_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155305905.1\|4893045_4894449_-\|IS1380-family-transposase	unknown	unknown	gnl\|CDD\|379340
NZ_AP021875.1\|WP_155305899.1\|4883604_4883829_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155305909.1\|4898158_4898968_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP021875.1\|WP_155305913.1\|4901759_4902644_-\|DUF1848-family-protein	gnl\|CDD\|378091	pfam08902, DUF1848, Domain of unknown function (DUF1848). This family of proteins are functionally uncharacterized. The C-terminus contains a cluster of cysteines that are similar to the iron-sulfur cluster found at the N-terminus of pfam04055.	1.04246e-91
NZ_AP021875.1\|WP_155308112.1\|4891404_4892019_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.20171e-57
NZ_AP021875.1\|WP_155308111.1\|4883940_4886634_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_AP021875.1\|WP_170302415.1\|4889208_4889871_+\|PAS-domain-S-box-protein	gnl\|CDD\|272971	TIGR00229, Sensor_protein_FixL, PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. [Regulatory functions, Small molecule interactions].	5.36001e-17
NZ_AP021875.1\|WP_155305905.1\|4893045_4894449_-\|IS1380-family-transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.81427e-12
NZ_AP021875.1\|WP_155305904.1\|4890276_4891116_+\|PAS-domain-S-box-protein	gnl\|CDD\|272971	TIGR00229, Sensor_protein_FixL, PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. [Regulatory functions, Small molecule interactions].	5.94245e-17
NZ_AP021875.1\|WP_155305897.1\|4882058_4882670_+\|hypothetical-protein	gnl\|CDD\|288934	pfam12118, SprA-related, SprA-related family. This family of bacterial proteins has a conserved HEXXH motif, suggesting they are putative peptidases of zincin fold. Proteins in this family are typically between 234 to 465 amino acids in length. Most members are annotated as being SprA-related.	5.64786e-19
NZ_AP021875.1\|WP_155305908.1\|4896492_4897803_-\|hypothetical-protein	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	3.39918e-39
NZ_AP021875.1\|WP_155305912.1\|4900791_4901763_-\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	5.8653e-118
NZ_AP021875.1\|WP_155305910.1\|4899429_4899834_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|237320	PRK13258, PRK13258, 7-cyano-7-deazaguanine reductase; Provisional.	9.12265e-51
NZ_AP021875.1\|WP_155305898.1\|4882684_4883590_-\|EamA-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.00901e-15
NZ_AP021875.1\|WP_155305900.1\|4886799_4887792_+\|signal-peptide-peptidase-SppA	gnl\|CDD\|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	1.1508e-86
NZ_AP021875.1\|WP_155305901.1\|4887807_4888578_-\|N-formylglutamate-amidohydrolase	gnl\|CDD\|377442	pfam05013, FGase, N-formylglutamate amidohydrolase. Formylglutamate amidohydrolase (FGase) catalyzes the terminal reaction in the five-step pathway for histidine utilisation in Pseudomonas putida. By this action, N-formyl-L-glutamate (FG) is hydrolyzed to produce L-glutamate plus formate.	2.29727e-41
NZ_AP021875.1\|WP_155305907.1\|4896256_4896496_-\|hypothetical-protein	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	2.25939e-05

>NZ_AP021875.1|WP_155308112.1|4891404_4892019_-|tyrosine-type-recombinase/integrase
MHSPTGGHATNNHPKKGERIAVDPIRRIKDIKAISKLTESNARNHLLFVMGINNGLRAGDLVRLKVRDVRYLKPGDSLTIKEGKTGKDNILVVNKTVYKALQLYLETVQPADDDYVFASRKGNSHIQSQAVSKLVKNWCKAINLRGNYGCHTLRKTWGYQQRIQHGVGFEILCKRYNHNSPAITMRYLGIEDREVHDVLMNEIG
>NZ_AP021875.1|WP_155305904.1|4890276_4891116_+|PAS-domain-S-box-protein
MLFKIENMGLKNDVLKTIIITIGSISLSIAITYSLCMIWGENQVIRVDYTLLISFIAPLIITPIVCAVFINLNNKLKETERQLKDEIHWRRLLIKESRDAIAVIDQNGKVFMANTQFADMLGYSVEEVHQLHIWDWDTQLNQEQYLGLTEDVSSVGLNFETQHRCRDGRIIDVEVSNNGGVYGGKKLILGICRDVTDRKKAESEKSALIDKLEKALAEIKTLQGFIPICASCKKIRSEKGYWEQIEQYIQDRSDAQFSHSLCPKCAKELYPDMDITSDQ
>NZ_AP021875.1|WP_155305903.1|4889874_4890249_+|hypothetical-protein
MPIQRHTDQAKRLTILTATGEVLVDEIVEVVSAFKDDLPALNILWDFRKAYLTESFESEFTRGIAKLAKTSVGLRRDGKTAYVASSDLVFGMCRMFTTQLGLEGALHSTMVFREMDEALKWLCD
>NZ_AP021875.1|WP_170302415.1|4889208_4889871_+|PAS-domain-S-box-protein
MAQTIKDKLSELEKQNRLLTDNLVDAVWVVNAGNLICEYVTPSIQSINGYAAEELTGKPVTDRLVPKSLKKAMVLLETSLIDYEHGKRGTRTFEVELTHKKGGSYWVEIRATLMEEAGRPLKIVGVTRDITTRKKYELKLEEQNRKLAEALADKERLLKEIKVLQSMLPICSGCKRIRDDDDKWWPLDAYVREHTDTDFTHTICPDCKDVFYPELGKKEL
>NZ_AP021875.1|WP_155305901.1|4887807_4888578_-|N-formylglutamate-amidohydrolase
MIFHIPHASFDIPVDLRSTLLLDDQALMDELSVMTDTHTDDLFGCHAGDEDTIVAFPVSRLIVDPERFTDDALEIMAWVGMGVIYEQTSSGERLRNTPSLEDRDELIRRFYLPHHKQLNDATGKELDHYGAALILDCHSFPSIPLPFEFDQNPDRPDICIGTDPAHTPRFLIEAAKQAVNDEGLSFRINKPSDGALVPTHYWQHDKRVLSVMIEVNRSLYMDEATGERSDQYEACKAMLGRIIQRLREASIPDQQT
>NZ_AP021875.1|WP_155305900.1|4886799_4887792_+|signal-peptide-peptidase-SppA
MRRSTKIIETLLIAMLMIGCAGPRITLFSDASDPLREMTLEGTAEERIALIPVTGIISDKPKAQFMRKTPGVVQEVVSHLHLAEKDDRVKAIILKIDTPGGTTTASDMLYHEIVSFKERTGKKIVVCMMNVATSGGYYISLPADVILAHPTTVTGSVGVILMRPEISGLMDKIGVGVKVNKSGMNKDMGSPFRPITPAEENLLQELADRLGQRFVDLVKQHRHLDGQRLARVADARIFLAEDALAVGLVDKIGYLQDAVNAASQLADLDEDVRVVTYRRTHYPDDNLYNTLTSEAVTASIARLLDTGLIGDLLTLDAGFYYLWPQALGAY
>NZ_AP021875.1|WP_155308111.1|4883940_4886634_+|DNA-polymerase-I
MKTNRKADQPTLYLIDGSAYIYRAYHAVRGLTNSRGLPTNATFGFTRMLIKLMQDRSPGYVAMFFDAKGPTFRHERYAEYKANRPPMPDDLVQQLPWIHKVTEAFNIPVFEMQGYEADDLIGTLARHAEDDGLRVVMVTGDKDFMQLVTNQCTIWDPMKDKVLDPAAIRESFGLEPRQMIDVMGFSGDSSDNIPGVPGIGQKTAVKLVQSFESMDGVYENIDTISGKKQKENLVNFKEQAQLSRELVTIDRHAPVEFDLEALKTRGPDDQALTKLFSELEFRQLQKEYASQEEKIERQYTAIMDRDALDALVRRLEAAERFALDTETTSQDPMQARLVGLSFSLQPAEAWYIPVGHNYLGAPEQLSLNTVLKRLGPVLTNPKIEKIGQNIKYDWMVLRRHGAELAGVSFDTMVASYLIAPGKRAHGLDQIALDYLGHKNIAYADVAGKGKSAVTFDQVMVEKAVPYACEDADITLAAYEIFVPLLEKNKVAELMKTVEMPLLPVLLEMEMTGVCVDRDRLHDLSESFADQLSLLEKQIHEMAGEAFNINSSQQLGHILFEKLKLPVQKKTKKKTGYSTDVEVLTTLARKHELPALVLRHRTLAKLKSTYADALLELIHPETGRIHTSFNQTVAATGRLSSSDPNLQNIPIRTEEGREIRKAFVPRKGWHFLSADYSQIELRILAHCSDDPILIQAFKEDEDIHTRTACEVFQVFPQMITDDLRRQAKAINFGIIYGMSAYGLSRELEIGNKMAQTYIDNYFARYKGVKAFIDQTIADARESRQTSTLLGRIRQLPEITSSNRNLRQFAERTAINTPIQGTAADLIKLAMINVHQALRNKGMRTAMLLSVHDEIIFEVPPEELEAAQALVRKEMEGVWDLAVPLKVNMAYGQNWAEAH
>NZ_AP021875.1|WP_155305899.1|4883604_4883829_-|hypothetical-protein
MNDTETRTNLRSRRRRKAPRTCHCCGKSVPFCWSCRCGFMICQDCMNENVWGMSCNGITWQCPDCGGQNGFGNQ
>NZ_AP021875.1|WP_155305898.1|4882684_4883590_-|EamA-family-transporter
MTIKKYIQSDLLLLLCGTIWGFAFVAQRLGMDHVGPFTFNGIRFFLGAMVLVPFICRRRELRQKQQIQNKGLMVYGALAGLAIFAGASLQQVGLVYTTAGKAGFITGLYVVIVPIMGLLWGQRTNLGTWGGALIAAVGMYLLSVNEDFRISFGDLLELIGAFMWASHIHLIGWASPKTDSLRLAFIQFMFCSGASLLTAMAIETIRMDDIVAAALPIFYGGALSVGVAYTLQVVGQKNAHPAHAAILLSLEAVFAAVGGWLILGEVMSVRGLVGCALMLSGMLLSQLYGLVVKKGPKPGVS
>NZ_AP021875.1|WP_155305897.1|4882058_4882670_+|hypothetical-protein
MIGRIDNSLSALPALGAAGVSNGQPSGRIGASVEPNAGQSDQKGNTTGDPTLTESEEQEVQRLNRRDQEVRAHERAHMAAGAGVVQGGASFTFTRGPDGKMYAVGGEVKIDTSTENDPDRTIRKMQQVKRAALAPAEPSGTDRSVAARAGQIEAQARQEKVKQENAEQKEDQNSLQDAGSLPVATARRPYQNEMTGQALNIMA
>NZ_AP021875.1|WP_155305905.1|4893045_4894449_-|IS1380-family-transposase
MSKHSKNYRQNELKIRRIETTADRLTGRAGLALFVAYMHGIQVFGWFDRWFGTIRKSRKGIDIAELFKQVLCFFADGTSRRHAYFDQISRDEGYAGSIETPIEDMASSHQIKRFFKAFAWTRVFLFRRLLQTLFIWRLRNTQPDVIELGIDTMVMDNDDAKCRHGVKPTYKKKKGFQPLQMNWGRLIVDAVFRSGDKHSNHGDTVLNMIRHMVLKIRCEYRGDVPIIIRMDSGFFDQKIFEICETLHVGYACGGKVYKDIKQIADNWDASKWKRYESGKKKAWQYAEFGIRQGNWKRFRRAIFCRLMHDDSKQLYLPGFRPDTIIVTNIGQGQAIDSMLEKAGAVEYLTTNGLVACYHERGSDELANRALKDFGHEQLPFKRFAPNAAWYYMMLVGHFLLESFKEDVSVPVLSIGSYASTVRRRLIDIAGKIVFHSEQTVLKVTRTCLESLRLPELFERCRTAPVIE
>NZ_AP021875.1|WP_155305906.1|4895419_4895935_-|hypothetical-protein
MNRRVTGATINLPFISFAVEPEDLEQKVAREVIVRLADKRVLTAFECCDDCVERAIASLMEIRSMLVNKQVELSGHADGGLFLLLELMLEGIRQFFTFVERLQSSRQGGRRDRRDLQPYFDALTMLRGHMYQCRNQIAVIAGMEKPAVPKSMCYEDAWQLESYEKPNGNRE
>NZ_AP021875.1|WP_155305907.1|4896256_4896496_-|hypothetical-protein
MKDFHSFRKNFINLASQKNAPIEKRRMVTGHTLGSGVDSQVYVVDLPVRQLFEEVISVIDFHKTLKLDFLRESKFVINQ
>NZ_AP021875.1|WP_155305908.1|4896492_4897803_-|hypothetical-protein
MGKLTDTQIQEIAVDHLQKWKDSFEAARTPLGDDVDPFLAHMALKKQIETFEGDRVSIRADLETGNYRDIVRELPEILEGYGLNIDEVDQDDPSFTKLCSSVLRAKERAISLYMDRLEGKGPRDDLDAAMDAVAGPLTSPTAAVAEPVDEGPLLSEVIEKYLAWQEKLPKDDKAKVNDPSAKANHIAALKLFVEFYGDIPIRRIEVQHVFEFQDMLCEYPTGRFRLGSPYREMTLKEIQGMDIEDTLMIPTINLYMNRVKLLFKYAIKRGHYKQVNPFADYRLSDSRSDAEKRSRFSKAELETLLKSKEYKDNLFDKPFQFWTPLIALFHGMRQKEIAQLYIADIEMKEGIPVFSVVQDEEDKRVKNATSRRHVPIHPFILHDLKFMKYVEQLKSEGEDRLFPELPFVKGSYGTKVSGGSRNTRDHTALILQRKHP
>NZ_AP021875.1|WP_155305909.1|4898158_4898968_+|hypothetical-protein
MNPITHSQSFFPFQYGNFSESTSFQAEQTRAGFISQSQSTDLTITTDEGDTVTLSLALATEINAGLHRSASYENGRAESTQTAFLEFSDSQSLSVEIDGNLSAEEQEDIRAAIEVIGGMIDDFLSGDLQEMAAGGELLKELDTVASLEAAFSYERQVKYGEQQRVEISQSALEENRGNHRRGHGRLQRLMQRIDKVTDDMADQVREFRGRRDHLAGSIRNLFNHYRNDEMENAPESRLRQEVVQTMQSAFVQKIQTLTESASFELSYTA
>NZ_AP021875.1|WP_155308113.1|4899049_4899235_-|hypothetical-protein
MDQDEQILRASKEIVVKFIETGRISPTGFPDAFKAIYRAVNETVKQSAGPAPTDGGSGEAA
>NZ_AP021875.1|WP_155305910.1|4899429_4899834_+|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MKSYDHTIRYTIDTPNVVTTDMLDPIDYHYRGKRDVVITISQPEFTSVCPMTGLPDFGTIEIRYTPDRFIVELKSLKYYLLQFRSVGMFYEHVSNRILDDLVQVLKPKMMEVTGKFTSRGGLTTQVCATYEAEP
>NZ_AP021875.1|WP_155305911.1|4899830_4900769_+|hypothetical-protein
MIAASRLKTILPALLAAALLIAGCGIASSYRPAPQKTIRDFSGSGKYLKKVGVVALLNNATLGGQQVPVSYMRAFLESINAEASHAVLVIPGRNEASPFLMNPPRAANGHLNVFTLSGLARQEGMNFLVSPLLMDVRLRTRDTGFWFFKDVAYSLQVQTAAAIYDTITGTRLALGTLIDEVDIDEYEAQRIRNGENVIVDSLEEVVEEMGQSLGERMAEAINEGKWLASVVALKDGACVIGAGSDVGVETGDRFAVLDASEMLTGLDGQRYVVPGVKIGEIAIDGVTPGQASGSPVSGGTVPPVGSILVPQS
>NZ_AP021875.1|WP_155305912.1|4900791_4901763_-|tRNA-dihydrouridine-synthase-DusB
MKIGTVETDNFTVLAPLAGITNLPLRLMAKRAGCGLVCSEMISSHGLVYKSGKTEQLLESAPAEKPLSVQIFGSKPSIMADAARIVQDSGADILDINFGCSVKKILKSNSGSALMKEPQLTRRILDAVRQAIDIPLTIKIRSGWDPSGQQALEIAGLAEDCGVDAVTVHPRTATQGFRGQADWSIIAAVKKALAIPVIGNGDVTEPADALRMLAETGCNGVMVGRAAIGNPMIFEQILAAAQGCPAEAPTDGQRIGMMLDYLRDSVRYLGEDRACRMMRSRLCWFVKGMRNAGLFRSSIRFIASEQEAMDLIGQYAESIGAGL
>NZ_AP021875.1|WP_155305913.1|4901759_4902644_-|DUF1848-family-protein
MKPELKQILSISRRTDIPAFYMPWFMDRVKRGAIEVVNPFNQQVRTVDVSPERIHTMVFWSKNFGLFLEHGYGEKLRAMGYHLFFNFTVNSRSRLLEPAVPSLDERLDQLRQLCKRFGAATVQWRFDPICHYRTNDGDIRDNLQDFQIIAAAAGKCGIDICISSFMDHYRKIARRTGRRLTFLNPSMAEKVKIAADMAATLSPLGIRLALCCENEILEALPPDCAIGPATCISAKRIMAVHGGSLSLRRDLGQRKTAGCQCTVSVDIGSYSLHPCHHNCLFCYASPACDRRTGR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP021875_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021875_4

5259494-5259645

Orphan

Consensus_repeat	Method
TCCTCGCGTCCATCTTTGCAATCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP021875_4

>merge|NZ_AP021875|4|5259494-5259645|PILER-CR
TCCTCAAGTCCATCTTTGCAATCACTGCCAGGTATCCGTAATCGTGAAGATATTGACTTTTGTCGCGTCCATCTTTGCAATCAACGGAACCAGCCAAAATTGTCCAACTGGCTGAAAATCCATATTGATCCTCGCGTCCATCTTTGCAATCG

>NZ_AP021875|4|1|5259494-5259645|PILER-CR
TCCTCAAGTCCATCTTTGCAATCA	CTGCCAGGTATCCGTAATCGTGAAGATATTGACTT
TTGTCGCGTCCATCTTTGCAATCA	ACGGAACCAGCCAAAATTGTCCAACTGGCTGAAAATCCATATTGA
TCCTCGCGTCCATCTTTGCAATCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021875.1\|WP_170302436.1\|5267261_5268581_-\|IS1380-family-transposase	unknown	unknown	gnl\|CDD\|379340
NZ_AP021875.1\|WP_155306198.1\|5251691_5253689_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_AP021875.1\|WP_155306205.1\|5260656_5261406_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_AP021875.1\|WP_155306201.1\|5257590_5259057_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_AP021875.1\|WP_155306211.1\|5268887_5269394_+\|ORF6N-domain-containing-protein	unknown	unknown	gnl\|CDD\|378443
NZ_AP021875.1\|WP_155306195.1\|5238638_5243837_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|224126
NZ_AP021875.1\|WP_155306206.1\|5261965_5263135_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NZ_AP021875.1\|WP_155306208.1\|5265820_5266198_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236151
NZ_AP021875.1\|WP_155306199.1\|5254648_5254834_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155306194.1\|5237820_5238381_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_AP021875.1\|WP_155306200.1\|5254966_5256535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021875.1\|WP_155306212.1\|5269528_5270635_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|289946
NZ_AP021875.1\|WP_155306209.1\|5266181_5267102_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NZ_AP021875.1\|WP_155306207.1\|5263277_5264681_-\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|238760
NZ_AP021875.1\|WP_155308136.1\|5256850_5257432_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_AP021875.1\|WP_155308137.1\|5264687_5265113_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373079
NZ_AP021875.1\|WP_155306197.1\|5246682_5251671_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380293
NZ_AP021875.1\|WP_155306204.1\|5260235_5260619_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379154
NZ_AP021875.1\|WP_155306196.1\|5243833_5246686_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|350769
NZ_AP021875.1\|WP_155306202.1\|5259053_5259437_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379352

Protein	Function_ID	Function_description	E-value
NZ_AP021875.1\|WP_170302436.1\|5267261_5268581_-\|IS1380-family-transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.92711e-35
NZ_AP021875.1\|WP_155306198.1\|5251691_5253689_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	7.82237e-08
NZ_AP021875.1\|WP_155306205.1\|5260656_5261406_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.36858e-11
NZ_AP021875.1\|WP_155306201.1\|5257590_5259057_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.78368e-30
NZ_AP021875.1\|WP_155306195.1\|5238638_5243837_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|224126	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only].	3.30265e-64
NZ_AP021875.1\|WP_155306206.1\|5261965_5263135_-\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	6.79095e-30
NZ_AP021875.1\|WP_155306208.1\|5265820_5266198_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236151	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR.	2.95442e-06
NZ_AP021875.1\|WP_155306207.1\|5263277_5264681_-\|ThiF-family-adenylyltransferase	gnl\|CDD\|238760	cd01483, E1_enzyme_family, Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.	5.1664e-22
NZ_AP021875.1\|WP_155306194.1\|5237820_5238381_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	5.40417e-58
NZ_AP021875.1\|WP_155306211.1\|5268887_5269394_+\|ORF6N-domain-containing-protein	gnl\|CDD\|378443	pfam10543, ORF6N, ORF6N domain. This domain was identified by Iyer and colleagues.	1.51857e-44
NZ_AP021875.1\|WP_155306212.1\|5269528_5270635_-\|hypothetical-protein	gnl\|CDD\|289946	pfam13203, DUF2201_N, Putative metallopeptidase domain. This domain, found in various hypothetical bacterial proteins, has no known function. However, it is related to pfam01435.	4.5454e-51
NZ_AP021875.1\|WP_155306209.1\|5266181_5267102_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	9.70622e-05
NZ_AP021875.1\|WP_155308136.1\|5256850_5257432_-\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	3.88813e-48
NZ_AP021875.1\|WP_155308137.1\|5264687_5265113_-\|hypothetical-protein	gnl\|CDD\|373079	pfam14462, Prok-E2_E, Prokaryotic E2 family E. A member of the E2/UBC superfamily of proteins found in diverse bacteria. Analysis of the active site residues suggest that members of this family are inactive as they lack the characteristic catalytic residues of the E2 enzymes. They are usually fused to or in the neighborhood of a multi/poly ubiquitin domain protein. Other proteins of the ubiquitin modification pathway such as the E1 and JAB proteins are also found in its gene neighborhood along with a distinct predicted metal-binding protein.	1.33866e-39
NZ_AP021875.1\|WP_155306197.1\|5246682_5251671_+\|N-6-DNA-methylase	gnl\|CDD\|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	3.17283e-10
NZ_AP021875.1\|WP_155306204.1\|5260235_5260619_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379154	pfam13384, HTH_23, Homeodomain-like domain.	0.00934941
NZ_AP021875.1\|WP_155306196.1\|5243833_5246686_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	3.47564e-64
NZ_AP021875.1\|WP_155306202.1\|5259053_5259437_-\|hypothetical-protein	gnl\|CDD\|379352	pfam13730, HTH_36, Helix-turn-helix domain.	0.000997061

>NZ_AP021875.1|WP_155306202.1|5259053_5259437_-|hypothetical-protein
MIKKKIIDKERIRRIDGGFAFIPHRFLTGGFVNDLSPDQLLLYFFLILAADRFGLSFYSYDKICTLLEMSLDQYVEARCALIKKELIAFDGTLFQVLALPQPPKKSNHQQPHPLDQIAQNMFKEVAS
>NZ_AP021875.1|WP_155306201.1|5257590_5259057_-|IS21-family-transposase
MIDKRTIFEIHRLKHLGWSDRKVARHLRIDRGSVKKYVSNPKVVQKRPNRISKLDPYRGQIKALVDKDPTVSAPVVLQQLESFTGKITIVRDYLRQLRGKRKQRIAYTRFESAPGEQMQVDWGHFGSLEYGDTRRKLYALVVIEAFSRMLFVRFTHSQKQYCLHSCLLEAFTWFGGCPKQLVIDNMATAVVERLGSVVRFNDTFLDFLCRFAIEPIACSPGSPYEKGKVESGVKYLRRNFMPLRSFVDLDDVQHQALDWLNTVANVRTHQTMGQRPVDRFEKVQLRSLPQRLPDTRQTQSLLVHKDFAVRFDGNTYTAPPWAIGKTVVVKADTAFVSLYLNDKRIAVHPRCWQRKQRIETPSHRQQVKKLRKKLWHDRQVAALMSLGTIAVDYINGLLDAGQPIAKQVKRLLVLKDKYGAEALVYALNKSMAHKALGADYVENIVHQEMAPKNDQPPVRLKNEQLNRIRLNQPSLAEYDAHALKREKK
>NZ_AP021875.1|WP_155308136.1|5256850_5257432_-|ATP-binding-protein
MALCYRQSKLNEKLTIDQFDFNHHSSRKKQKTRILNLMSLVFLKEKMDIILIGNPGVGKSFLAKAAAYAATQAGVKVLFTTAMDMINHLIAADADHSLLKKLHYYQSPELLVIDEIGYLGLGKQGSNLFFQVISQRHEAKSTAITTNLPFADWGKIFDSTTVATAIADRLVYNSQIFILEGPSYRKRTKPNNP
>NZ_AP021875.1|WP_155306200.1|5254966_5256535_-|hypothetical-protein
MNPAYRIHEYSTQIFKQIIAEADSVSEAYIDSKSHTFYFQEYFRVLRASTIIVEYDYIDHDFLEDFSFYYVKCFKRYSRKCARLHFFDISFSKEEFDGFLNGGNSNLKEEILQKAYLGFIVLKPLPKTIIGRTCIKTYPSDKDRRQFPPLREYEANLFGIKLTVNSLAYQEQDNVVAACATSSLWSVFNSTGRLFQHKILSPVEISEAACSSLPLESRFFPNPGLSSAQMAQAIRAIGLEPYLIKVEDQELLKAATYAYLKCKIPMLFGFLLMDKSGKEPMPLGLHAVAITGFSLGEPAPIPYGRTGFLSIASRIDKVYSHDDQVGPFSRMVLNYDTIKMDNGNAVKTILSSWGGSDRKLDRIRAIPTILLIPVYNKIRITFQTIQETITHFDRIIETFRLNKVLPFKERLVWDIYLTTVNEVKSGMLSSKKWRNKLRLQVLMQSMPRFIWRATAFCKGQYVIDLLFDATDLEQSPLLFNAVGYDEDFFETLIDLSRQDDLPAVLKDPMFLRILEWFSNQKI
>NZ_AP021875.1|WP_155306199.1|5254648_5254834_-|hypothetical-protein
MTKKTQTPKKVDWSREIIDWACTPNGQKELESAKESSSSAISELKKALLVDNEMLTATFDI
>NZ_AP021875.1|WP_155306198.1|5251691_5253689_+|hypothetical-protein
MEIQAAREKPRLWIERLIIFADTTDPVVLREISFTQGLNVIWGIAQQVIGDEDIPGILTGHSVGKTLLCRLIRYCLGEHAFGRKDTMEAIRHAFPRGAVGATIHIDDVPWSVVRSIGISEDSSASSVLALEELIVKPQTEYPYSGFRKGLDKAFLTSLPSPKPPEDKEPYLWDHILAWLTRDQETRYQNLWQWRSGRSDSQTPTFTRRKQNALFLIRMVLGIADERESKLIEEIENLKLAIKEKESRQKELSQEPENRIRYAEHALLDLIGPPEKWMDNGEGLFGFSTRVESFKVSRTKELERLKHKRHLLDKSLTENKSVVRQMEREIKKIVAAIQGIEESREQPDEKDEMRQKLESAWEIECTYGNIEFKKCSHYRAYLGELRGKWIALEKVRREKRVQLTTDEENQAIEQMVIDETRNRETLERRRSEIRRLEIQIQNVEKEIERATLNLKLAEYHIAQRREAQDLKDGKREDSELKAIAGQLKKDRQNLRALETSLGSAQIKQYHRVMDLKQLYDKVLKSILSENYTGEILLPPKDDLAFVIRETVGNMTGEAVESLALVLADVTAMLWAVEGNGHHPCFLLHDSPREADLDRHIYSRFLCRVHEISKGLGGRQAPFQYILTTTTVPPLPLRKDETIRLELEAHPEDRLLFKRFLRKPEMF
>NZ_AP021875.1|WP_155306197.1|5246682_5251671_+|N-6-DNA-methylase
MKKHGAFSTVTTEGGLLPSGLLKAVTSGQGDLAGTKPTDYHLGDGERINEAVSRSYSRLANAWKGFQKGLGALPESDPATTQTRERWLLILFQELGYGRLMTSSASEIEGKSYPLSHFWHKSPIHLVGARVNMDRRTAKVAGAARTSPHSLVQEFLNRSEEHLWGFVSNGFTLRILRDNASMTRQSYVEFDLAAMMEGEVYADFALLWMLCHQSRVEAVNVHECWLEQWAKQAQDQGSRVLEKLREGVESAISCLGSGFLAHPANGKLKDSLRSGHLSTQDYYRQLLRLVYRFLFLFVAEDRNLLLSPKAENATREIYERFYSMSRLRNMAGKRKGTRHADLYEGVKQVMGKLADDAGCPELGLACLGGFLWSEESIPDLFLSHIMNQDLLDSVRALAFFVDANVLMPVDYKNLGSEELGSIYESLLELHAEANADSATFVLQTAGGNERKTTGSYYTHPSLVQCLLDSALEPVIAEAIKRPNPEEAILSLKICDPACGSGHFLVAASHRIAKKLAMIRTEDEEPAPEQIQTALRDVIGRCIYGVDINPMAVELCKVSLWMEALEPGKPLSFLDHRILCGNSLLGATPALIKEGIPDAAFKPIEGDDKDFCKAFKKENKDERTGQKSLFGPGGKAWYGLGDCHVVMAHVDTIEDSTPKGIHEKEEQYRRCVTSEGFQHAKLVADAWCAAFVWKKKARPNLPEPITHELFKELENNPQVLPEPMARETYRLAGEYAFFHWHLAFPEVFSIPEMDEKPENDQTGWSGGFDCVLGNPPWERIKLQEKEWFATRDPDIANASNAAARRKKINRLIENDPDMYAAFTDARRRAEGESKLVRDTGLFPLCGRGDVNTYSIFSELKRGLLNPFGRVGCIVPSGIATDDTTKFFFQSLMDTSSLMSLYSFENEEFIFPSVHHATKFCLLTMGSPGLRLQRAMDFVFFARQVKQLDEKERHFTLTANDIAILNPNTRTCPIFKYKQDAELTKYIYGRVPVLLKEITKKEPEENPWGIKFATMFHMANDSGLFRTKEQLELEGYNLIGNIFRQEKHIYLPLYEGKMFWHFDHRFGTYEGQTQAQANQGKLPELSAEQHLNPEFFSIPRYWVAEEHVKARVPKRPELLASALDLPEEGREEAVKKAFCYWAAGYWKKAGDEEQAKKLLEVAIHPSISDSQIDILNKWLLDMKCERMQERFPLTHVDVDRMTDSSYDLFPLAEELLDRFSPKCFVAFRDVTSAVVLRTAVFSIVPFVAVGHTAPLVFFDNIKVKNFSNFLACMNSLVLDYCARQSVGGSHLTYSYLKQLPVPVPNVFDEICPWDTKTSIGDWCFQRVTELTFTAWDSEPFSMDGDYFQPPFCWDNDRRFIIRAELDAALFYLYLGGEERWSQDGSNKLLVTFPTPRHAVEYILNTFRILRERDEKAHGYFRTKDTILEIYDEMALVMVANQATISEGREPNALYQTRIDPPPGPLFDQNGDFVPMEQWDQNSWPPHIHRPRGWQDKTKPIPVTVPYKEDPQVFPWKGREQFIQDLIPHLVNEQPGLLFETYRTIAFLATWPGKLRDILSEGTAIKFGALSRQTLNACTFPDSHHFRPWQIRNSLEERKRYVTIDPQSGAATVPDNIELPELPINIKPLVPFVLIAAIELDRMKQDATEKVKLDTIKAFESSFAA
>NZ_AP021875.1|WP_155306196.1|5243833_5246686_+|DEAD/DEAH-box-helicase-family-protein
MSYAVGSLVQVRGREWVVLPESKDDLLVLRPLGGLDEEVTGILPSLEEIQPAHFDLPNPEDVGDHRSCRILRDAVRLSTRASAGPFRSFGRIAFSPRPYQLVPLLMALKLDPIRMLIADDVGVGKTIEALMVARELLDRGEIQRTAILCPPHLAEQWQGELASKFQIEAELVLSSTVRQLERRCRVGQSLFDLYPHVVVSMDFVKSDRRRDEFVNKCPEMVIVDEAHTCAYGYEGHGGRHQRHQMVKSLCANLSRHMIFVTATPHSGKEEPFRALLGFLDPGYAHFPSDLTGPANESHRRKLARHFVQRRRADIRHFMQTETPFPKRLEREDTYKLSENYRKLIEKVLKYTQEIVREAAGGKFQQRVRWWGALALLRSVASSPAAAISTLRKRTATQDAATLEEVDEIGRKTVLDLGVEDQTEGVDLVPGSDTSNDSEESQSEEKANHKRLLAMARDAEKLMGKSDVKLLQVTKVVKGLLDEGFSPIVFCRFIPTADYVAEALQSTIGKDVKIISVTGLMPPADREERVSALSTHPKRVLVATDCLSEGINLQEWFDAVIHYDLSWSPTRHEQREGRVDRYGQPSDEVRVITYYGLDNPIDGIVLEALLRKHKKIRSSLGISVPVPVDSDAVLEAIFEGLLMREKPGHKQMSLFDELTAPMASKKAELEDQWEDAAEKEKRSRTIFAQETIKAEEVALELAIVEKAIGSGQNLEEFVKESLHSLGAVVSQKSRHVEFHLSETPRALRDAMGVMEKLKARFDRTGSNGVIQLTRTHPIAEGLANFVMDTALDSKVTGIAKRAGAIRTRAVSQRTVLFLVRYRYDIITTRSRATSSQLVEECTLMAFSGSGNSIKWLSEDECSALLGIRPDENIVPEQASFFVQRVVDVFDSFSPHLEEEGRKRAGFLLESHKRVRDAAKIKGLAYKVEPKLPPDVLGIYVYLPQAGAGGAQ
>NZ_AP021875.1|WP_155306195.1|5238638_5243837_+|DEAD/DEAH-box-helicase
MDVFGLRDRLIEDYSDFVKGFIHILDARISQQVEEELNTGLLWPDPLIQLNPSFELGETVDELVKDGILHEICSKIFRKGKSDTGIDRDGVSLWLHKHQAEATKVASKGHNYVLTTGTGSGKSLAYIIPIVNHILNNGPGRGIQAIIVYPMNALANSQEGELRKFLCHGFPDGKGPVSFARYTGQESDERKQEIISSPPDILLTNYVMLELLLTRNQEKPLIEGGKHLRFLVFDELHTYRGRQGADVSMLVRRTKDAFASKKIQCVGTSATLSTSGTYAQQMKEVAKVASTIFGDEVQSEHVIGETLRRATKEENDSDAEFLNRLRQRLEDNEIEPPCDYNGYVVDALSSWIETVFGIAHETESGRLVRAKPLSITGEKGAARTLSELTGVPEVRCIQAIQKQLLASYYCEPNPDTGFPVFAFRLHQFISRGDTIYASLESEDDRHLTFQAQQFVPGDRGKILLPLVFCRECGQEYYCVRKERDQETHVSIYTSRELSDRLNDENTEPGFLFTSSTDPWPEGGEQLLERLPDDWIEDHRGIRRVKPSRRKNLPDSIRVSTKGEESEKGIDMQYLPAPFRFCLKCGVAYNFRQTSDFGKLASLGTEGRSTATTILSLASTRYLQKDESLDPRARKLLSFTDNRQDASLQAGHFNDFVEVGLLRSALHKAVKGAGASGLNHDTLVQMVFNALDLPKTLYASDPDVRFRALEDTEKALRQVIGYRLYRDLKRGWRITAPNLEQCGLLVIDYLSLDDVCHAEDVWEDCHPVLQNAEPDVRKKVAKTLLDFMRRELAIKVTYLDPETHERIKLQSSQRLRAPWAIDDTEKMETSSILYPRPKRQGQDYSGNVFLSPRGGFGQYLGRPNTFGQGHPLSLDDKQEICRDLLEALRVAGLAEVVSEPSDTDDVPGYQLPAAGLVWLPGDASTPFHDPIRVPRVSETGGRTNPFFIRYYEQIANDGKGMEAREHTAQVRYEDRIDREERFRKGHLPILYCSPTMELGVDIAELNCVNMRNVPPTPANYAQRSGRAGRSGQPALVFSYCSTFRPHDQYFFKRPHLMVAGSVTPPRLDLANEDLIKTHVHAVWLAEAGIHLGTSLKDVLDLSGENPSLALQDHVRDDIAAISPRERAVKRAKDVLSDIEDWLRETDWFSDQWISEVISQVGTEFERACERWRGLYRAAARQVDAMHRIVNDHHKSHDEKEKAKRLRAEAEAQLDLLTESQNVVASDFYSYRYFASEGFLPGYNFPRLPLSAFIPGRRRQKGVDEFLSRPRFLAIAEFGPRAIVYHEGSRFRINKVILPVEDRGDGEDIVTNAAKQCETCGYLHPIHSGDGPDLCERCGQPLSIPLRNLFRLQNVATKRVERINSDEEERLRLGYEIKTGIRFSRKSGGLSCKTASVKDGENVIATLVYGHSSTLWRINLGWTRRANKDQHGFVLDTERGYWATNQQDADDAEDPLSKRKRRVVPFVEDTKNALLFEPVQDWDDTVMASLQAALKNAIQIEYQLEDSELAAEPLPGRDSRHCLLFYEAAEGGAGVLRLLLEDATAFNRVARQALSLCHFDPDTGEDLRRPPEGKEDCEAACYDCLLSYFNQGDHAILDRKAIRDFLLRFRDAKVDLSPAVPPRAIHLELLRNQCQSGLEKNWLQFLEEAGYNLPSKAQLFLEKCKTRPDFLYDDKMVAIYVDGPHHEYPERKDRDAQQMDCLADVLTYQVIRFGHRDDWEQIIARHPHIFGRRL
>NZ_AP021875.1|WP_155306194.1|5237820_5238381_+|recombinase-family-protein
MGRMIGYARVSTPDQSLDLQIDDLKAAGCKKIFTDKISGARAERPGLDGCIKTLRGGDTLMVWRLDRLGRSMPHLVTVVTELRDKKIGFISLRDGVIDTTTASGELIFNIFAALAQFDRELIRERTRAGLKAARARGRSGGRKPVAREDPRVIAAKKMHADMDLSISEICKTLKISKATLYRYIKM
>NZ_AP021875.1|WP_155306204.1|5260235_5260619_+|helix-turn-helix-domain-containing-protein
MEQNLRKQAIYRYLKGESPKSIYTDLHRSKNWFFKWLKRYQTGDSNWYKGRSRAPKRMPTAIGELEKQRIISVRSQLESQKFAQIGASAIKWELSKSGFDFPSDRTINRVLKREGLIKKKHVRSQRR
>NZ_AP021875.1|WP_155306205.1|5260656_5261406_+|DDE-type-integrase/transposase/recombinase
MHQADLVGPRYIKGDGKFYSFNVMDVFSHQVYIESQRSKQDQKVANSLLRCWKAMGLPDYLQMDNELSFRGSNKYPRSFGLVIRLCLHFGVQPVFIPIGEPWRNGVVEKFNDTYNKKFFRRQWFASYTTLKRQSKNFQRFHNKHHRYSCLKGKTPHEVLKVSNHNPSTIGANTKLPQLDSIADGNIILIRFIRSNRLLDIFGEKFLVSKDLVYSYVKAIIVTKIHRMQLYLGDELIDAFDYHLPVISRQ
>NZ_AP021875.1|WP_155306206.1|5261965_5263135_-|IS4-family-transposase
MHQGRIVFSQLLDFLPKKSFRTCVNRYGGNYRIRSLTCYEQFLCMAFAQLTYREILRDTVLCLRAMHNKLHHIGIQNKVAKSTLADANEKRDWRIYCDFAQVLIGQARKLYADDDFGLQLDETVYALDASTIDLCRSVFPWARFRSTKSGIKVHTLLDLRGNIPSFVSITDAKVHDVNILDELFPEPGSIYVMDRAYLDFERLYRLHRGLSFFILRSKSNTQLRRLYSAPVDKSTGVICDQTVRPVRINSANAYPGKLRRIKYYDLETEKRLTFLTNHFELEARTVADLYKCRWQVELFFKWIKQHLRIKKFFGISEPAVKTQIWIAISVYVLVAIMKKRLKLEQSLYTILQVLSITIFEKTLISWAMTGSNYNNKFASGHIQLNLFDS
>NZ_AP021875.1|WP_155306207.1|5263277_5264681_-|ThiF-family-adenylyltransferase
MNIALSLTQSHHEQLRTHLFPDDGLEAIAFALCGRRQGVDSHGLLVHEVLPIPYEFCERGPDYIRWRTEKIPEILDRATIKDFSVVKIHSHPNGFDTFSRVDDRSDKDFFAYARDWTDNMALHASVIMFRDGSMKGRTLSDDNDFQPIACIKFVGDDLKFWFSRKKLTHLDEYGIRVAQAFGQGTYQLLKALKIGVVGCSGTGSLVVEQLARNCVGNLVLVDPERIEIKNLNRIPQATMADALNKEYKANVLARSVDEMRFGTQVRTIADDLYSFHAVKALSECDVLFGCMDGIDGRHLLNKLSTAYLIPYFDIGVKLAADGAGGIDQICGSVHYLQPGGSSLLSRGVYTHEQLRAASMKRADPIAYKEQLKAGYIEGVDEEKPAVISVNMLFASLGVNELLARIHPFRDDPNSAFSVNRIGLHAGTFFNEPDGQPCATLNKWVGRGDIIPLLGMPSLSSEEDRMNH
>NZ_AP021875.1|WP_155308137.1|5264687_5265113_-|hypothetical-protein
MPAAATSSPRYHFDLPEEDIEFLDALDLPWETVAEGKNQFVVIYGYSRIPDGYNIKSVDLHVRLGSTYPDTQIDMVYFYPHLSRKNGKPIKAISNQNFDGKTWQQWSRHRTPSNPWRIGIDDLSTHIALVGEWLVQELKKV
>NZ_AP021875.1|WP_155306208.1|5265820_5266198_+|helix-turn-helix-domain-containing-protein
MTDKEKKEGERNLLAQYLSDIRASKGLKLREVEEATDREVSNAYLSQLENGKIKKPSPNILYTLSTVYDVSYESLMEKAGYIVPAGKGKKVPKRAISDLTSEEEKALLEYLAFYRTRKRGNVKKG
>NZ_AP021875.1|WP_155306209.1|5266181_5267102_+|ImmA/IrrE-family-metallo-endopeptidase
MLKKDDCTLSHSVYEKIRREAKRILIESNAIGRFPTPVADIMDVAKVEVVDDNILDEGFLSKIRKKAGRALKKAISVTLGVLDVKGRFVFVDKTVHAVRQTFIKIHEAGHFIMAWQRKLYSIVEDCEKTISTEIEDHFDREANVFTSEVLFQLDTFSEEAENHGFGIQVPIRLSKKYGASIYASIRRYVSKNWRACAVLVLDPPELMAGCGFKAGLRRVVYSDKFIEVFGKINWPEQYTPDDEIGSMVPVGGRRMSAPREIGLKNDNGELCECIAEAFTQTYQVFILIHAVKTLKPGYCICVLTVS
>NZ_AP021875.1|WP_170302436.1|5267261_5268581_-|IS1380-family-transposase
MRKQNSKKGRPRKVIKQGKAHLSFTGKNVTSYGGMAVVSRALDYFRVREDLKHLTAELDECRHHQMRHVLEQLITLRLLGGEAVSDTALLDDPALKALFEWDAIAHPATFGRRLGDLRWLHNLGLEGIVTGLSDQVAQPGMRLVAIDSTVASVFGQQIEGADRGYNPHKPGRDSYHPLLAVDVKARSVVDGYLRPGSCASGHGLDDFIHKIAAESSHPMDQTVFRLDKGLTAGKVLDTIEQFGAGYVAKVKLTANVVGKISKIKKWRAIGNGHFAANMRCQLDGWSHPRRMAVIERYLPAEEQSPQLPLFEMMEGRYEVVVTNLHLNAENIWRLYNRGTVVEQIIEELKNDFAATGIRTKGFWANDALFLTGLIAYNLLNCIRRLTLPKALRTARIKRLGLLLLHLPANVLYRSRQWQIKIRRDHPMRLIFYRAMAALQ
>NZ_AP021875.1|WP_155306211.1|5268887_5269394_+|ORF6N-domain-containing-protein
MSQLVEVNDITQRIYTVRGVKVMLDRDLADLYGVETKRLKEQVRRNIDRFPKDFMFELSNLEFRNLRSQIATSSWGGPRYVPMAFTEQGVAMLSSVLHSKKAIQINVQIMRAFVQLRHLVLDHAELKREVAALRSQTEERFEVVFTVLDKLMSDDNESKNKIGFVKKD
>NZ_AP021875.1|WP_155306212.1|5269528_5270635_-|hypothetical-protein
MDKMNKARIAVTLDHPFFGSLALRMGLVADPDCQTAYTNGIVIAYNPDFVNSLSTDQIKGLFAHEVMHVALAHHLRRGAREFGNWNAACDYAINDILKESGFVLPAGVLGGMGTDQSAEAIYKRLPEVKVKSNGPDEFGEVRDYPGKDGKKATPAEMAQALQEVKVMVAQAYTQAKAMGNMPGGLERLVQTITRPRVDWREVLRRFMQQVTSNDYSWTPPNRRYVHLGLYLPALASMAIGEGVIAVDTSGSIGDRQVAQFASEITAIVEAVETNVKVVYCDTRVKSVETFCRHDMPIKIHPIGGGGTNFRPPFEWVDEKGLRPAYLVYLTDLAGTRFPDDPGYPVLWAKLGMGGTTPPFGECLTVAEY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

406800 : 427383

Catovirus(100.0%)

transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155302130.1\|406800_407721_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_155307884.1\|408436_408763_-\|transposase	transposase	NA	NA	NA	NA
WP_155302131.1\|408789_409143_-\|transposase	transposase	NA	NA	NA	NA
WP_155302132.1\|409240_410368_+	glycosyltransferase	NA	NA	NA	NA
WP_155302133.1\|410713_411589_+	hypothetical protein	NA	NA	NA	NA
WP_155302134.1\|411770_412670_+	glycosyltransferase	A0A1V0SAH6	Catovirus	2.2e-12	39.3
WP_155302135.1\|412977_413952_+	hypothetical protein	NA	NA	NA	NA
WP_155307885.1\|414473_414608_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155302136.1\|414878_415775_+	hypothetical protein	NA	NA	NA	NA
WP_155302137.1\|415835_416846_-	hypothetical protein	NA	NA	NA	NA
WP_155302138.1\|416868_417219_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155302139.1\|417231_417540_-\|transposase	transposase	NA	NA	NA	NA
WP_155302140.1\|418878_420102_+	hypothetical protein	NA	NA	NA	NA
WP_155302141.1\|420731_421910_+	hypothetical protein	NA	NA	NA	NA
WP_155302142.1\|422434_423451_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155302143.1\|424696_426079_+\|transposase	transposase	NA	NA	NA	NA
WP_155302144.1\|427038_427383_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

730185 : 801298

Agrobacterium_phage(10.0%)

protease,plate,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155302405.1\|730185_731571_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_155302406.1\|731604_732285_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_155302407.1\|732285_735780_+	type VI secretion system protein ImpL	NA	NA	NA	NA
WP_155302408.1\|735764_736520_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_155302409.1\|736751_737576_+	hypothetical protein	NA	NA	NA	NA
WP_155302410.1\|737572_738865_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_155302411.1\|738954_739464_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_155302412.1\|739551_741042_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_155302413.1\|741179_741665_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_155302414.1\|741689_742154_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_155302415.1\|742278_744084_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_155302416.1\|744047_745088_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_155302417.1\|745108_747751_+	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	3.5e-87	32.8
WP_155302418.1\|747912_749133_+	hypothetical protein	NA	NA	NA	NA
WP_155302419.1\|749198_750770_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_155302420.1\|750912_753147_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.0e-51	29.0
WP_155302421.1\|753386_753653_+	hypothetical protein	NA	NA	NA	NA
WP_155302422.1\|753674_756302_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_170302111.1\|756291_757341_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_155302424.1\|757373_758027_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_155302425.1\|758039_758441_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_155302426.1\|758723_759707_-	FHA domain-containing protein	NA	NA	NA	NA
WP_155302427.1\|759830_761486_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_170302112.1\|761493_762336_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_155302429.1\|763057_763933_+	hypothetical protein	NA	NA	NA	NA
WP_170302113.1\|763978_765616_+	protein kinase	A0A0H4Y184	Salmon_gill_poxvirus	8.2e-18	26.6
WP_155302431.1\|765718_766447_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_155302432.1\|766451_767651_+	protein kinase	A0A146JFA3	Tokyovirus	2.8e-23	29.5
WP_155302433.1\|767732_769706_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_170302114.1\|769917_770337_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_155302435.1\|770385_771237_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_155302436.1\|771401_771782_+	response regulator	NA	NA	NA	NA
WP_155302437.1\|772400_773345_+	RNA polymerase factor sigma-32	A0A248SJA5	Salicola_phage	1.5e-24	31.6
WP_155302438.1\|773455_775156_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_155302439.1\|775251_775935_+	hypothetical protein	NA	NA	NA	NA
WP_155302440.1\|775949_776453_+	hypothetical protein	NA	NA	NA	NA
WP_155302441.1\|776433_777282_+	P-loop NTPase	NA	NA	NA	NA
WP_155302442.1\|777284_778064_+	ATP-grasp domain-containing protein	A0A1D7SR78	Cyanophage	7.6e-22	34.2
WP_155302443.1\|778050_779229_+	HD domain-containing protein	NA	NA	NA	NA
WP_155302444.1\|779247_780024_+	UPF0280 family protein	NA	NA	NA	NA
WP_155302445.1\|780120_780519_+	hypothetical protein	NA	NA	NA	NA
WP_155302446.1\|780642_783270_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	3.1e-43	24.0
WP_155307901.1\|783287_785300_+	N-acetylmuramoyl-L-alanine amidase	M1HNA7	Bacillus_virus	2.0e-18	30.6
WP_155302447.1\|785374_786166_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_155302448.1\|786708_788010_+	AMP-binding protein	NA	NA	NA	NA
WP_155307902.1\|788077_788509_+	ACT domain-containing protein	NA	NA	NA	NA
WP_155302449.1\|788719_789049_-	hypothetical protein	NA	NA	NA	NA
WP_155302450.1\|789081_791394_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_155302451.1\|791410_793249_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_155302452.1\|793276_793861_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_155302453.1\|793857_794541_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_155302454.1\|794537_795173_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_155302455.1\|795198_795879_+	potassium transporter	NA	NA	NA	NA
WP_155302456.1\|796270_796471_-	hypothetical protein	NA	NA	NA	NA
WP_155302457.1\|796467_796740_-	hypothetical protein	NA	NA	NA	NA
WP_155302458.1\|797451_799371_-	hypothetical protein	A0A2K9V3N5	Faecalibacterium_phage	1.1e-24	32.6
WP_155302459.1\|799501_799948_-	hypothetical protein	NA	NA	NA	NA
WP_155302460.1\|800008_801298_-\|capsid	phage major capsid protein	A0A142K632	Streptomyces_phage	6.8e-84	49.0

DBSCAN-SWA_3

896991 : 910557

Vibrio_phage(36.36%)

tail,head,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155302556.1\|896991_897498_+	hypothetical protein	A0A2I7S9B9	Vibrio_phage	2.4e-16	35.3
WP_155302557.1\|897507_898041_+	hypothetical protein	NA	NA	NA	NA
WP_155302558.1\|898044_898503_+	hypothetical protein	NA	NA	NA	NA
WP_155307906.1\|898529_898793_+	hypothetical protein	A0A2I7S9D8	Vibrio_phage	3.7e-21	63.1
WP_155302559.1\|898795_899371_+	DUF3486 family protein	A0A2I7S9D1	Vibrio_phage	2.1e-24	36.2
WP_155302560.1\|899370_901014_+	hypothetical protein	A0A219VH72	Ochrobactrum_phage	1.6e-122	47.7
WP_155302562.1\|901568_901898_+	hypothetical protein	Q5ZQY3	Pseudomonas_phage	1.6e-21	54.3
WP_155302563.1\|901894_903025_+	hypothetical protein	Q5ZQY0	Pseudomonas_phage	7.9e-36	44.2
WP_155302564.1\|903066_903432_+\|head	head decoration protein	R9TP46	Rhizobium_phage	1.2e-09	39.6
WP_155302565.1\|903473_904481_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_155302566.1\|904529_904829_+	hypothetical protein	NA	NA	NA	NA
WP_155302567.1\|904832_905264_+	DUF1320 family protein	A0A2P9JZJ4	Alteromonadaceae_phage	5.9e-16	42.0
WP_155302568.1\|905263_905716_+	phage virion morphogenesis protein	R9U1C4	Rhizobium_phage	9.8e-22	39.5
WP_155302569.1\|905722_906142_+	hypothetical protein	NA	NA	NA	NA
WP_155302570.1\|906200_907226_+	hypothetical protein	A0A2D1GN10	Marinobacter_phage	5.5e-52	37.9
WP_155302571.1\|907247_907778_+	hypothetical protein	NA	NA	NA	NA
WP_155302572.1\|907878_910557_+\|tail	phage tail tape measure protein	D4HTW4	Vibrio_phage	7.4e-16	28.5

DBSCAN-SWA_4

1920746 : 1941293

Faecalibacterium_phage(29.41%)

plate,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155303426.1\|1920746_1921421_-	DUF2612 domain-containing protein	A0A1W5PTX4	Pseudoalteromonas_phage	2.7e-07	27.2
WP_155303427.1\|1921417_1922626_-\|plate	baseplate J/gp47 family protein	A0A2H4J8D2	uncultured_Caudovirales_phage	5.1e-33	29.9
WP_155303428.1\|1922622_1922979_-	hypothetical protein	A0A1W5PTX0	Pseudoalteromonas_phage	1.6e-06	31.2
WP_155303429.1\|1922978_1923197_-	hypothetical protein	NA	NA	NA	NA
WP_155303430.1\|1923205_1923874_-	hypothetical protein	A0A0K0L9F4	Pseudomonas_phage	7.0e-08	26.3
WP_155303431.1\|1923870_1924713_-	hypothetical protein	A0A2K9V3M6	Faecalibacterium_phage	1.2e-20	29.8
WP_155303432.1\|1924705_1925032_-	hypothetical protein	A0A291LA99	Escherichia_phage	2.4e-06	34.4
WP_155303433.1\|1925031_1925736_-	hypothetical protein	NA	NA	NA	NA
WP_155303434.1\|1925739_1927305_-	hypothetical protein	A0A1J0GWA6	Alteromonas_phage	1.9e-27	38.0
WP_170302195.1\|1927301_1927442_-	hypothetical protein	NA	NA	NA	NA
WP_155303436.1\|1927462_1927915_-	hypothetical protein	NA	NA	NA	NA
WP_155303437.1\|1927914_1928313_-	hypothetical protein	NA	NA	NA	NA
WP_155303438.1\|1928359_1929421_-	DUF3383 family protein	W8E9V5	Pseudomonas_phage	8.7e-45	31.7
WP_155303439.1\|1929424_1929934_-	hypothetical protein	NA	NA	NA	NA
WP_155303440.1\|1929933_1930254_-	hypothetical protein	L7TJL3	Rhizobium_phage	1.1e-06	37.0
WP_155303441.1\|1930250_1930724_-	hypothetical protein	A8ATG9	Listeria_phage	6.7e-05	28.7
WP_155303442.1\|1930720_1931068_-	DUF4054 domain-containing protein	NA	NA	NA	NA
WP_155303443.1\|1931068_1931464_-	hypothetical protein	NA	NA	NA	NA
WP_155303444.1\|1931525_1932479_-	DUF2184 domain-containing protein	A0A2K9V3M5	Faecalibacterium_phage	3.1e-49	37.9
WP_155303445.1\|1932519_1932996_-	hypothetical protein	NA	NA	NA	NA
WP_155303446.1\|1933044_1934211_-	DUF2213 domain-containing protein	A0A2K9V3M4	Faecalibacterium_phage	5.9e-18	26.4
WP_155303447.1\|1934207_1935107_-\|capsid	minor capsid protein	A0A2K9V3J6	Faecalibacterium_phage	1.2e-23	31.1
WP_155303448.1\|1935103_1936471_-	DUF1073 domain-containing protein	H2BCQ3	Synechococcus_phage	2.8e-51	31.2
WP_155303449.1\|1936467_1938009_-	hypothetical protein	A0A2K9VGU9	Faecalibacterium_phage	7.0e-51	30.0
WP_155303450.1\|1937992_1938463_-	hypothetical protein	NA	NA	NA	NA
WP_155303451.1\|1938552_1938762_-	hypothetical protein	NA	NA	NA	NA
WP_155303452.1\|1938758_1939160_-	hypothetical protein	NA	NA	NA	NA
WP_155303453.1\|1939186_1939720_-	hypothetical protein	NA	NA	NA	NA
WP_155303454.1\|1939729_1940206_-	hypothetical protein	A0A142EZL8	Stenotrophomonas_phage	2.2e-16	50.6
WP_155303455.1\|1940352_1940916_-	hypothetical protein	NA	NA	NA	NA
WP_155303456.1\|1940912_1941293_-	hypothetical protein	A0A1B1IPU6	uncultured_Mediterranean_phage	1.8e-08	37.4

DBSCAN-SWA_5

2579463 : 2585565

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155304008.1\|2579463_2580309_-	deoxyribonuclease IV	A0A1V0SCI4	Indivirus	4.1e-21	27.7
WP_155307994.1\|2580341_2580578_-	YheU family protein	A0A2H4J8A7	uncultured_Caudovirales_phage	9.4e-08	42.5
WP_155304009.1\|2580591_2581281_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_155307995.1\|2581426_2582227_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	3.1e-42	43.0
WP_155304010.1\|2582240_2583257_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.7e-61	40.2
WP_155304011.1\|2583427_2584000_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A0P0IKJ1	Acinetobacter_phage	4.7e-53	49.5
WP_155304012.1\|2584062_2585565_-	chorismate-binding protein	S4VT78	Pandoravirus	1.4e-40	33.0

DBSCAN-SWA_6

4113827 : 4127071

Staphylococcus_phage(44.44%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155305244.1\|4113827_4114574_+	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.0e-15	29.8
WP_155308067.1\|4114630_4114861_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	5.0e-06	32.9
WP_155305245.1\|4114967_4116209_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_155305246.1\|4116465_4116918_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_155305247.1\|4116933_4118193_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.3e-91	49.7
WP_155305248.1\|4118189_4118699_+	cytidine deaminase	A0A285PY53	Cedratvirus	8.7e-51	62.5
WP_155305249.1\|4118831_4119293_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_155305250.1\|4119499_4120603_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.5e-50	36.2
WP_155305251.1\|4120799_4121465_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-29	37.3
WP_155305252.1\|4121552_4122779_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.1e-95	47.5
WP_155305253.1\|4122798_4123272_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.3e-34	50.3
WP_155305254.1\|4123277_4123721_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_155305255.1\|4123778_4124429_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_155305256.1\|4124433_4125516_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_155305257.1\|4125550_4127071_+\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	3.3e-85	35.7

DBSCAN-SWA_7

5517290 : 5569019

uncultured_Mediterranean_phage(27.27%)

integrase,tail,plate

attL 5511290:5511303|attR 5529283:5529296

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5511290:5511303	attL	NA	NA	NA	NA
WP_170302463.1\|5517290_5518490_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
WP_155308149.1\|5519249_5520899_-	AarF/ABC1/UbiB kinase family protein	E5EQY1	Bathycoccus_sp._RCC1105_virus	1.2e-45	30.4
WP_155306418.1\|5520987_5521992_-	DUF2219 family protein	NA	NA	NA	NA
WP_155306419.1\|5522097_5523084_-	hypothetical protein	NA	NA	NA	NA
WP_155306420.1\|5523279_5527791_-	2-hydroxyacyl-CoA dehydratase	NA	NA	NA	NA
WP_155306421.1\|5527787_5528816_-	phosphohydrolase	NA	NA	NA	NA
WP_155306422.1\|5528812_5531887_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	8.0e-115	27.1
5529283:5529296	attR	NA	NA	NA	NA
WP_155306423.1\|5531883_5532378_-	hypothetical protein	NA	NA	NA	NA
WP_155306424.1\|5532367_5533375_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_155306425.1\|5533361_5534579_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155306426.1\|5534575_5536051_-	TolC family protein	NA	NA	NA	NA
WP_155306427.1\|5536047_5536668_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_155306428.1\|5537214_5537913_-	acetate--CoA ligase family protein	NA	NA	NA	NA
WP_170302464.1\|5538009_5539083_-	butyrate kinase	NA	NA	NA	NA
WP_155306430.1\|5539094_5539940_-	phosphate butyryltransferase	NA	NA	NA	NA
WP_155306431.1\|5539960_5540860_-	hypothetical protein	NA	NA	NA	NA
WP_155306432.1\|5540914_5542303_-	CoA-binding protein	NA	NA	NA	NA
WP_155306433.1\|5542342_5543722_-	CoA-binding protein	NA	NA	NA	NA
WP_155306434.1\|5543718_5544495_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155306435.1\|5544845_5545958_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_155308150.1\|5546130_5546352_-	excisionase family DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	2.2e-19	64.9
WP_155306436.1\|5546550_5547111_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_155306437.1\|5547107_5547890_-	glucosamine 6-phosphate synthetase	A0A1B1IUF7	uncultured_Mediterranean_phage	2.5e-49	47.0
WP_155308151.1\|5547889_5548102_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_155306438.1\|5548389_5549388_-	amidoligase family protein	A0A1B1IUD7	uncultured_Mediterranean_phage	2.4e-105	63.4
WP_155306439.1\|5549623_5549890_-	VrlD	NA	NA	NA	NA
WP_155306440.1\|5549903_5553497_-	DUF4815 domain-containing protein	F8WQ05	Bacillus_phage	5.3e-94	25.4
WP_155306441.1\|5553508_5554042_-	hypothetical protein	NA	NA	NA	NA
WP_155306442.1\|5554055_5554388_-	hypothetical protein	NA	NA	NA	NA
WP_155306443.1\|5554398_5554992_-	hypothetical protein	NA	NA	NA	NA
WP_155306444.1\|5555001_5556573_-\|tail	phage tail protein	NA	NA	NA	NA
WP_155308152.1\|5556572_5557982_-\|plate	baseplate J/gp47 family protein	A0A1Q1PVP2	Phage_DP-2017a	9.2e-34	24.1
WP_155306445.1\|5558081_5558999_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_155306446.1\|5558998_5559856_-	hypothetical protein	NA	NA	NA	NA
WP_155306447.1\|5559964_5560267_-	hypothetical protein	NA	NA	NA	NA
WP_155306448.1\|5560277_5560544_-	PAAR domain-containing protein	R9U4D0	Rhizobium_phage	4.3e-09	63.6
WP_155306449.1\|5560546_5560921_-	hypothetical protein	NA	NA	NA	NA
WP_155306450.1\|5560913_5561681_-	glycosyltransferase	A0A0F7L2F7	uncultured_marine_virus	1.9e-09	28.6
WP_155306451.1\|5561692_5562742_-\|plate	baseplate assembly protein V	NA	NA	NA	NA
WP_155306452.1\|5562757_5563084_-	hypothetical protein	NA	NA	NA	NA
WP_155306453.1\|5563070_5563502_-	DUF882 domain-containing protein	A0A2I7RG18	Vibrio_phage	8.5e-23	47.8
WP_155306454.1\|5563515_5564781_-	hypothetical protein	NA	NA	NA	NA
WP_155306455.1\|5564880_5565171_-	hypothetical protein	NA	NA	NA	NA
WP_155306456.1\|5565167_5565638_-	hypothetical protein	NA	NA	NA	NA
WP_155306457.1\|5565640_5565952_-	hypothetical protein	NA	NA	NA	NA
WP_155306458.1\|5565959_5567012_-	hypothetical protein	NA	NA	NA	NA
WP_155306459.1\|5567028_5567490_-\|tail	phage tail protein	NA	NA	NA	NA
WP_170302599.1\|5567501_5569019_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A127AW39	Bacillus_phage	6.6e-62	36.4

DBSCAN-SWA_8

5577982 : 5627666

Acidithiobacillus_phage(35.71%)

integrase,transposase,capsid

attL 5578101:5578116|attR 5621152:5621167

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155306472.1\|5577982_5582539_-\|capsid	minor capsid protein	NA	NA	NA	NA
5578101:5578116	attL	NA	NA	NA	NA
WP_170302050.1\|5584278_5585769_-	hypothetical protein	G9BWB0	Planktothrix_phage	1.5e-05	45.1
WP_170302051.1\|5585925_5586147_+	hypothetical protein	NA	NA	NA	NA
WP_170302052.1\|5586306_5586651_+	hypothetical protein	NA	NA	NA	NA
WP_155306474.1\|5587306_5587498_+	hypothetical protein	NA	NA	NA	NA
WP_155306475.1\|5587528_5587933_+	hypothetical protein	NA	NA	NA	NA
WP_155306476.1\|5587886_5588828_+\|integrase	tyrosine-type recombinase/integrase	A0A1B1IQT7	uncultured_Mediterranean_phage	6.0e-21	29.2
WP_155306477.1\|5588910_5589189_-	hypothetical protein	NA	NA	NA	NA
WP_155306478.1\|5589580_5589958_-	hypothetical protein	NA	NA	NA	NA
WP_155306479.1\|5590133_5590466_-	hypothetical protein	NA	NA	NA	NA
WP_155306480.1\|5590800_5591223_-	hypothetical protein	K4HZX2	Acidithiobacillus_phage	2.8e-10	32.3
WP_155306481.1\|5591219_5592806_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	1.0e-89	46.1
WP_155306482.1\|5592795_5593323_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	3.2e-16	36.1
WP_155306483.1\|5593385_5593607_-	hypothetical protein	NA	NA	NA	NA
WP_155306484.1\|5593910_5594534_+	repressor LexA	E5DV74	Deep-sea_thermophilic_phage	3.4e-12	38.5
WP_155306485.1\|5594581_5595748_+	hypothetical protein	NA	NA	NA	NA
WP_155306486.1\|5595767_5596844_+	hypothetical protein	NA	NA	NA	NA
WP_155306487.1\|5597542_5598919_+	hypothetical protein	NA	NA	NA	NA
WP_155306488.1\|5599190_5599910_+	DUF5131 family protein	A0A2P1A0W3	Gordonia_phage	1.0e-60	43.1
WP_155306489.1\|5599966_5601268_+	hypothetical protein	NA	NA	NA	NA
WP_155306490.1\|5601258_5602434_+	hypothetical protein	NA	NA	NA	NA
WP_155306491.1\|5603398_5604394_+	hypothetical protein	NA	NA	NA	NA
WP_155306492.1\|5604526_5606431_+	UvrD-helicase domain-containing protein	A0A2H4UW05	Bodo_saltans_virus	1.3e-06	23.6
WP_155308154.1\|5606585_5606786_+	excisionase family DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	6.1e-16	57.1
WP_155306493.1\|5606915_5609156_+	TerB N-terminal domain-containing protein	NA	NA	NA	NA
WP_155306494.1\|5609142_5610462_+	DUF2791 family P-loop domain-containing protein	NA	NA	NA	NA
WP_155306495.1\|5610470_5612636_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_155306496.1\|5612889_5613333_-	TIR domain-containing protein	NA	NA	NA	NA
WP_155306497.1\|5613430_5614594_-	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	1.1e-29	31.4
WP_155306498.1\|5614590_5615256_-	hypothetical protein	NA	NA	NA	NA
WP_155306499.1\|5615581_5616529_+	hypothetical protein	NA	NA	NA	NA
WP_155306500.1\|5616645_5617356_+\|integrase	tyrosine-type recombinase/integrase	A0A0E3T6W0	Gordonia_phage	1.8e-09	32.9
WP_155306501.1\|5617477_5617675_+	hypothetical protein	NA	NA	NA	NA
WP_155306502.1\|5617807_5618197_+	hypothetical protein	NA	NA	NA	NA
WP_155306503.1\|5618193_5618394_+	DUF4314 domain-containing protein	A0A2K5B281	Erysipelothrix_phage	8.2e-05	41.7
WP_155306504.1\|5618688_5619471_+	antirestriction protein	NA	NA	NA	NA
WP_155306505.1\|5619472_5619814_+	DUF2958 domain-containing protein	NA	NA	NA	NA
WP_155306506.1\|5619878_5620043_-	hypothetical protein	NA	NA	NA	NA
WP_155306507.1\|5620179_5620482_+	hypothetical protein	NA	NA	NA	NA
WP_155306508.1\|5620562_5621075_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155306509.1\|5621090_5621456_+\|transposase	transposase	NA	NA	NA	NA
5621152:5621167	attR	NA	NA	NA	NA
WP_170302465.1\|5621627_5622947_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_155306511.1\|5623886_5625452_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.3e-134	48.6
WP_155306512.1\|5625445_5626204_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.3e-61	47.1
WP_155306513.1\|5626330_5626705_+\|transposase	transposase	NA	NA	NA	NA
WP_155306514.1\|5626745_5627666_-\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

5658897 : 5693180

Acidithiobacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155306539.1\|5658897_5660097_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155308156.1\|5660803_5661076_+	hypothetical protein	NA	NA	NA	NA
WP_155306540.1\|5661111_5661765_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_155306541.1\|5661736_5662609_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-08	24.2
WP_155306542.1\|5662619_5663477_+	amidohydrolase family protein	NA	NA	NA	NA
WP_155306543.1\|5663566_5664331_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_155306544.1\|5664334_5665231_+	amidohydrolase family protein	NA	NA	NA	NA
WP_155306545.1\|5665274_5665877_+	isochorismatase family protein	NA	NA	NA	NA
WP_155306546.1\|5665939_5666800_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
WP_155306547.1\|5666859_5668395_+	AMP-binding protein	Q75ZG1	Hepacivirus	1.1e-40	27.4
WP_170302469.1\|5668608_5669565_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155306549.1\|5669626_5670895_+	propanoyl-CoA acyltransferase	NA	NA	NA	NA
WP_155306514.1\|5671014_5671935_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155306513.1\|5671975_5672350_-\|transposase	transposase	NA	NA	NA	NA
WP_155306512.1\|5672476_5673235_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.3e-61	47.1
WP_155306511.1\|5673228_5674794_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.3e-134	48.6
WP_155306550.1\|5674921_5675452_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_155306551.1\|5675472_5675823_-\|transposase	transposase	NA	NA	NA	NA
WP_155306539.1\|5675905_5677105_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155308157.1\|5677430_5678780_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_155306552.1\|5678899_5679361_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_155306553.1\|5679422_5679995_-	DUF4125 family protein	NA	NA	NA	NA
WP_155306554.1\|5679996_5681715_-	VWA domain-containing protein	NA	NA	NA	NA
WP_155306555.1\|5681718_5682606_-	AAA family ATPase	NA	NA	NA	NA
WP_170302470.1\|5682783_5683011_-	benzylsuccinate synthase beta subunit family protein	NA	NA	NA	NA
WP_155306556.1\|5683146_5685726_-	glycyl radical protein	NA	NA	NA	NA
WP_155308159.1\|5685824_5686001_-	benzylsuccinate synthase gamma subunit family protein	NA	NA	NA	NA
WP_155306557.1\|5686102_5687092_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA
WP_155306558.1\|5687561_5688815_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_155306559.1\|5688908_5689442_+	hypothetical protein	NA	NA	NA	NA
WP_155306560.1\|5689454_5689727_+	MoaD/ThiS family protein	NA	NA	NA	NA
WP_155308160.1\|5689737_5690499_+	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_155306561.1\|5690887_5691214_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_155306562.1\|5691210_5691558_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	7.3e-25	44.3
WP_155306563.1\|5691620_5693180_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.8e-108	44.2

DBSCAN-SWA_10

5696516 : 5748636

Leptospira_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_170302469.1\|5696516_5697473_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155306567.1\|5697610_5698357_+	3-oxoacyl-ACP reductase FabG	A0A0M4JSW6	Mollivirus	5.4e-09	24.4
WP_155306568.1\|5698381_5699620_+	CoA transferase	NA	NA	NA	NA
WP_155306569.1\|5699603_5700833_+	CoA transferase	NA	NA	NA	NA
WP_155306570.1\|5700937_5702167_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_155306571.1\|5702305_5703076_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_155306572.1\|5703169_5703928_+	electron transfer flavoprotein beta subunit/FixA family protein	NA	NA	NA	NA
WP_155306573.1\|5703924_5704812_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_155306574.1\|5704812_5706774_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155306575.1\|5707123_5708494_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155306576.1\|5708640_5709954_+	outer membrane protein transport protein	NA	NA	NA	NA
WP_155306577.1\|5710217_5711264_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA
WP_155306578.1\|5711404_5713294_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_155306579.1\|5713370_5714405_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	1.8e-42	34.2
WP_155306580.1\|5714563_5715220_+	isoprenoid biosynthesis glyoxalase ElbB	NA	NA	NA	NA
WP_155306581.1\|5715742_5716192_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_170302471.1\|5716343_5717504_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155306583.1\|5717562_5719332_+	hypothetical protein	NA	NA	NA	NA
WP_155306584.1\|5719306_5719828_+	hypothetical protein	NA	NA	NA	NA
WP_155306586.1\|5721480_5722449_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155306587.1\|5722719_5723793_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_170302472.1\|5723955_5724249_-\|transposase	transposase	NA	NA	NA	NA
WP_155306589.1\|5724478_5725804_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155306590.1\|5727069_5727258_+	hypothetical protein	NA	NA	NA	NA
WP_155306591.1\|5727617_5727848_+	hypothetical protein	NA	NA	NA	NA
WP_155306592.1\|5727795_5728095_+	hypothetical protein	NA	NA	NA	NA
WP_155306593.1\|5728118_5728640_+	hypothetical protein	NA	NA	NA	NA
WP_155306594.1\|5729118_5729361_+	hypothetical protein	NA	NA	NA	NA
WP_170302473.1\|5729457_5731386_+	response regulator	NA	NA	NA	NA
WP_155306596.1\|5731522_5731798_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_155306597.1\|5731895_5732480_+	isochorismatase family protein	NA	NA	NA	NA
WP_155306598.1\|5732603_5733449_+	alpha/beta fold hydrolase	A0A285PZ18	Cedratvirus	2.2e-06	39.1
WP_155306599.1\|5733806_5734517_+	hypothetical protein	NA	NA	NA	NA
WP_155306600.1\|5734963_5735185_+	hypothetical protein	NA	NA	NA	NA
WP_155306601.1\|5735496_5736495_+	nitronate monooxygenase	NA	NA	NA	NA
WP_155306602.1\|5736575_5737355_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_155306603.1\|5737408_5737768_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_155306604.1\|5737833_5738745_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_155306605.1\|5738900_5739767_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	4.0e-48	37.4
WP_155306606.1\|5739898_5740573_+	hypothetical protein	NA	NA	NA	NA
WP_155306607.1\|5740602_5740986_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155306608.1\|5741058_5741502_+	cytochrome c class III	NA	NA	NA	NA
WP_155306609.1\|5741544_5742207_+	methylenetetrahydrofolate reductase C-terminal domain-containing protein	NA	NA	NA	NA
WP_155306610.1\|5742829_5743162_+	hypothetical protein	NA	NA	NA	NA
WP_155306561.1\|5743391_5743718_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_155306562.1\|5743714_5744062_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	7.3e-25	44.3
WP_155306563.1\|5744124_5745684_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.8e-108	44.2
WP_155306611.1\|5745708_5745921_+	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	4.6e-06	44.8
WP_155306612.1\|5745951_5746191_-	hypothetical protein	NA	NA	NA	NA
WP_155306512.1\|5746318_5747077_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.3e-61	47.1
WP_155306511.1\|5747070_5748636_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.3e-134	48.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP021875

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection