CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_AP021878	Desulfosarcina ovata strain 28bB2T plasmid Do28_2, complete sequence	0 crisprs	NA	0	0	0
NZ_AP021876	Desulfosarcina ovata strain 28bB2T	7 crisprs	RT,cas1,cas2,csx16,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csx1,cas6,WYL,cas3,cas5,cas8c,cas7,cas4,DEDDh,csa3,cas8b1,PD-DExK,Cas9_archaeal,PrimPol,DinG	1	17	32
NZ_AP021877	Desulfosarcina ovata strain 28bB2T plasmid Do28_1, complete sequence	0 crisprs	WYL,PD-DExK,DEDDh	0	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP021876_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_1

518343-520448

TypeIII

Consensus_repeat	Method
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	PILER-CR
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CRISPRCasFinder
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CRT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	PILER-CR

30 spacers

csx16,cas2,cas1,RT,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,csx1,cas6

The CRISPR arrays of NZ_AP021876_1

>merge|NZ_AP021876|1|518343-520448|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCTTAATCCCTTCGGTTCAGGGAAGCCATCCAACCCATCATTCTTATTGCTATGTTCATGCTGGCAAAGTCTTAATCCCTTCGGTTCAGGGAAGCCATACAACCGGAGGAATTTTTGTTAACCCCCCTTCCGGATAAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCACTTTAAATGGTAACTTCGAGCCGAAAAGTCGGGTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACCCTCGACTTCGACAAATCCGACATCCGCCCAGAGTCTTAATCCCTTCAGTTCAGAGAAACCATCCAACCTGGTAGCCCTTATGCTTAATAGTGGAGATGGAAAAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCAACACGGCGGCACTTACTAGTCTCGTTTCAAAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGATGCTTATTCCTCAAAAGGAGCATTGGGAGGCGGTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACCTCCGCGCCCCAATCCTACTCCCGTTAGGACTACTGTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACCCACCGGACCCGAAGAAGTAGAAATCAACTTCGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGTGGCAATTTTCTTAGGCCAGAGACCGACGTGAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATCTACGAGATCATAGCAATCATTCCCATCTAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATAACACTAAGAAAGATGCGGCTAAGTCGATTGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCTGATAGAGATTGAGTAATGACTTGGCAGGTTTGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCTGATAGAGATTGAGTAATGACTTGGCAGGTTTGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGACCGGAGATACTACAGTAGAAGATGGAGATGTGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCTCCTTCTCTGCAACAGCAGAAGACGACAAAGGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGAGCCTGTAATCAACGACCAGCCCCAACCCATTAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCTAAAACCCGGCTCACAGCAGCGGGCCAGCGGGCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGAACAAGGAGGTCCTTATGGACACAAAACCAAAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCTAAACAGTTTTTTGAAGCCGGAGGGTTTACTCGCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCAAACCACATTCCCGACAGGGGCACCATTTAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATATAGAATAGATTGAAAGGAGTGTTGCCATGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCCACGAGTTTGGCGGGTGTTGCAGACTGTGGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCTGTGAACTCGGGACAGAAGACCACAACCTAAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGACTTCATTTTGTCGGATGGGGATGAGGCTGTCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCAGTCGGATCCTCTATTATTCTCCTTCATTTCAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATTACTGACATTCACAGTCCCCGCAATTGCCATCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATCTGCGTTGGACACACCAACAGACTTTATTGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCCCAAGGCTTGTATTAGGGAACGACCCATCTGAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATCTTTTTTTCTCACCCAACCGAATGGGACGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC

>NZ_AP021876|1|1|518343-520448|PILER-CR
GTCTTAATCCCTTCGGTTCAGGGAAGCCATCCAACC	CATCATTCTTATTGCTATGTTCATGCTGGCAAA
GTCTTAATCCCTTCGGTTCAGGGAAGCCATACAACC	GGAGGAATTTTTGTTAACCCCCCTTCCGGATAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ACTTTAAATGGTAACTTCGAGCCGAAAAGTCGG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CTCGACTTCGACAAATCCGACATCCGCCCAGA
GTCTTAATCCCTTCAGTTCAGAGAAACCATCCAACC	TGGTAGCCCTTATGCTTAATAGTGGAGATGGAAAAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AACACGGCGGCACTTACTAGTCTCGTTTCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GATGCTTATTCCTCAAAAGGAGCATTGGGAGGCG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	TCCGCGCCCCAATCCTACTCCCGTTAGGACTACT
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CACCGGACCCGAAGAAGTAGAAATCAACTTCG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GTGGCAATTTTCTTAGGCCAGAGACCGACGTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTACGAGATCATAGCAATCATTCCCATCTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATAACACTAAGAAAGATGCGGCTAAGTCGATT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACCGGAGATACTACAGTAGAAGATGGAGATGT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TCCTTCTCTGCAACAGCAGAAGACGACAAAGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAGCCTGTAATCAACGACCAGCCCCAACCCATTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAAACCCGGCTCACAGCAGCGGGCCAGCGGGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAACAAGGAGGTCCTTATGGACACAAAACCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAACAGTTTTTTGAAGCCGGAGGGTTTACTCGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AAACCACATTCCCGACAGGGGCACCATTTAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATATAGAATAGATTGAAAGGAGTGTTGCCATGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCCACGAGTTTGGCGGGTGTTGCAGACTGTGGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCTGTGAACTCGGGACAGAAGACCACAACCTAAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGACTTCATTTTGTCGGATGGGGATGAGGCTGTCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCAGTCGGATCCTCTATTATTCTCCTTCATTTCAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATTACTGACATTCACAGTCCCCGCAATTGCCATCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATCTGCGTTGGACACACCAACAGACTTTATTGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCCCAAGGCTTGTATTAGGGAACGACCCATCTGAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATCTTTTTTTCTCACCCAACCGAATGGGAC
	ATATAGAATAGATTGAAAGGAGTGTTGCCATG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCACGAGTTTGGCGGGTGTTGCAGACTGTGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TGTGAACTCGGGACAGAAGACCACAACCTAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACTTCATTTTGTCGGATGGGGATGAGGCTGTC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AGTCGGATCCTCTATTATTCTCCTTCATTTCAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATTACTGACATTCACAGTCCCCGCAATTGCCATC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATCTGCGTTGGACACACCAACAGACTTTATTG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCCAAGGCTTGTATTAGGGAACGACCCATCTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTTTTTTTCTCACCCAACCGAATGGGAC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC

>NZ_AP021876|1|1|518343-520448|CRISPRCasFinder
GTCTTAATCCCTTCGGTTCAGGGAAGCCATCCAACC	CATCATTCTTATTGCTATGTTCATGCTGGCAAA
GTCTTAATCCCTTCGGTTCAGGGAAGCCATACAACC	GGAGGAATTTTTGTTAACCCCCCTTCCGGATAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ACTTTAAATGGTAACTTCGAGCCGAAAAGTCGG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CTCGACTTCGACAAATCCGACATCCGCCCAGA
GTCTTAATCCCTTCAGTTCAGAGAAACCATCCAACC	TGGTAGCCCTTATGCTTAATAGTGGAGATGGAAAAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AACACGGCGGCACTTACTAGTCTCGTTTCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GATGCTTATTCCTCAAAAGGAGCATTGGGAGGCG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	TCCGCGCCCCAATCCTACTCCCGTTAGGACTACT
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CACCGGACCCGAAGAAGTAGAAATCAACTTCG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GTGGCAATTTTCTTAGGCCAGAGACCGACGTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTACGAGATCATAGCAATCATTCCCATCTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATAACACTAAGAAAGATGCGGCTAAGTCGATT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACCGGAGATACTACAGTAGAAGATGGAGATGT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TCCTTCTCTGCAACAGCAGAAGACGACAAAGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAGCCTGTAATCAACGACCAGCCCCAACCCATTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAAACCCGGCTCACAGCAGCGGGCCAGCGGGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAACAAGGAGGTCCTTATGGACACAAAACCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAACAGTTTTTTGAAGCCGGAGGGTTTACTCGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AAACCACATTCCCGACAGGGGCACCATTTAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATATAGAATAGATTGAAAGGAGTGTTGCCATG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCACGAGTTTGGCGGGTGTTGCAGACTGTGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TGTGAACTCGGGACAGAAGACCACAACCTAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACTTCATTTTGTCGGATGGGGATGAGGCTGTC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AGTCGGATCCTCTATTATTCTCCTTCATTTCAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATTACTGACATTCACAGTCCCCGCAATTGCCATC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATCTGCGTTGGACACACCAACAGACTTTATTG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCCAAGGCTTGTATTAGGGAACGACCCATCTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTTTTTTTCTCACCCAACCGAATGGGAC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC

>NZ_AP021876|1|1|518343-520448|CRT
GTCTTAATCCCTTCGGTTCAGGGAAGCCATCCAACC	CATCATTCTTATTGCTATGTTCATGCTGGCAAA
GTCTTAATCCCTTCGGTTCAGGGAAGCCATACAACC	GGAGGAATTTTTGTTAACCCCCCTTCCGGATAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ACTTTAAATGGTAACTTCGAGCCGAAAAGTCGG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CTCGACTTCGACAAATCCGACATCCGCCCAGA
GTCTTAATCCCTTCAGTTCAGAGAAACCATCCAACC	TGGTAGCCCTTATGCTTAATAGTGGAGATGGAAAAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AACACGGCGGCACTTACTAGTCTCGTTTCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GATGCTTATTCCTCAAAAGGAGCATTGGGAGGCG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	TCCGCGCCCCAATCCTACTCCCGTTAGGACTACT
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CACCGGACCCGAAGAAGTAGAAATCAACTTCG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GTGGCAATTTTCTTAGGCCAGAGACCGACGTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTACGAGATCATAGCAATCATTCCCATCTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATAACACTAAGAAAGATGCGGCTAAGTCGATT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACCGGAGATACTACAGTAGAAGATGGAGATGT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TCCTTCTCTGCAACAGCAGAAGACGACAAAGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAGCCTGTAATCAACGACCAGCCCCAACCCATTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAAACCCGGCTCACAGCAGCGGGCCAGCGGGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAACAAGGAGGTCCTTATGGACACAAAACCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAACAGTTTTTTGAAGCCGGAGGGTTTACTCGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AAACCACATTCCCGACAGGGGCACCATTTAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATATAGAATAGATTGAAAGGAGTGTTGCCATG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCACGAGTTTGGCGGGTGTTGCAGACTGTGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TGTGAACTCGGGACAGAAGACCACAACCTAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACTTCATTTTGTCGGATGGGGATGAGGCTGTC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AGTCGGATCCTCTATTATTCTCCTTCATTTCAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATTACTGACATTCACAGTCCCCGCAATTGCCATC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATCTGCGTTGGACACACCAACAGACTTTATTG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCCAAGGCTTGTATTAGGGAACGACCCATCTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTTTTTTTCTCACCCAACCGAATGGGAC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC

>NZ_AP021876|1|2|519796-520448|PILER-CR
	CATCATTCTTATTGCTATGTTCATGCTGGCAAA
GTCTTAATCCCTTCGGTTCAGGGAAGCCATACAACC	GGAGGAATTTTTGTTAACCCCCCTTCCGGATAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ACTTTAAATGGTAACTTCGAGCCGAAAAGTCGG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CTCGACTTCGACAAATCCGACATCCGCCCAGA
GTCTTAATCCCTTCAGTTCAGAGAAACCATCCAACC	TGGTAGCCCTTATGCTTAATAGTGGAGATGGAAAAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AACACGGCGGCACTTACTAGTCTCGTTTCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GATGCTTATTCCTCAAAAGGAGCATTGGGAGGCG
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	TCCGCGCCCCAATCCTACTCCCGTTAGGACTACT
GTCTTAATCCCTTCGGTTCAGGGAAACCATCCAACC	CACCGGACCCGAAGAAGTAGAAATCAACTTCG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GTGGCAATTTTCTTAGGCCAGAGACCGACGTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTACGAGATCATAGCAATCATTCCCATCTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATAACACTAAGAAAGATGCGGCTAAGTCGATT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CTGATAGAGATTGAGTAATGACTTGGCAGGTTT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACCGGAGATACTACAGTAGAAGATGGAGATGT
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TCCTTCTCTGCAACAGCAGAAGACGACAAAGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAGCCTGTAATCAACGACCAGCCCCAACCCATTA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAAACCCGGCTCACAGCAGCGGGCCAGCGGGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GAACAAGGAGGTCCTTATGGACACAAAACCAAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TAAACAGTTTTTTGAAGCCGGAGGGTTTACTCGC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AAACCACATTCCCGACAGGGGCACCATTTAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATATAGAATAGATTGAAAGGAGTGTTGCCATGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCCACGAGTTTGGCGGGTGTTGCAGACTGTGGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCTGTGAACTCGGGACAGAAGACCACAACCTAAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCGACTTCATTTTGTCGGATGGGGATGAGGCTGTCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCAGTCGGATCCTCTATTATTCTCCTTCATTTCAAGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATTACTGACATTCACAGTCCCCGCAATTGCCATCGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCATCTGCGTTGGACACACCAACAGACTTTATTGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCCCAAGGCTTGTATTAGGGAACGACCCATCTGAGGTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACCCATCTTTTTTTCTCACCCAACCGAATGGGAC
	ATATAGAATAGATTGAAAGGAGTGTTGCCATG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCACGAGTTTGGCGGGTGTTGCAGACTGTGG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	TGTGAACTCGGGACAGAAGACCACAACCTAAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	GACTTCATTTTGTCGGATGGGGATGAGGCTGTC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	AGTCGGATCCTCTATTATTCTCCTTCATTTCAA
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATTACTGACATTCACAGTCCCCGCAATTGCCATC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	ATCTGCGTTGGACACACCAACAGACTTTATTG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CCCAAGGCTTGTATTAGGGAACGACCCATCTGAG
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC	CATCTTTTTTTCTCACCCAACCGAATGGGAC
GTCTTAATCCCTTCAGTTCAGGGAAACCATCCAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_155321017.1\|527559_528684_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NZ_AP021876.1\|WP_155314103.1\|517919_518279_-\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl\|CDD\|370601
NZ_AP021876.1\|WP_155321011.1\|515832_516909_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379583
NZ_AP021876.1\|WP_155321015.1\|524338_526294_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_AP021876.1\|WP_173179020.1\|514470_514800_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
NZ_AP021876.1\|WP_155308703.1\|513457_514474_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP021876.1\|WP_155325894.1\|522192_523140_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_AP021876.1\|WP_155321019.1\|529104_529770_-\|hypothetical-protein	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|187890
NZ_AP021876.1\|WP_155321020.1\|529826_529991_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321012.1\|520734_521814_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_AP021876.1\|WP_155321008.1\|512643_513477_-\|Retron-type-reverse-transcriptase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_AP021876.1\|WP_155321018.1\|528826_529132_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_AP021876.1\|WP_155321016.1\|526263_527547_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
NZ_AP021876.1\|WP_155321013.1\|521817_522192_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NZ_AP021876.1\|WP_155308698.1\|511293_511590_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_AP021876.1\|WP_155321014.1\|523145_524342_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
NZ_AP021876.1\|WP_155308708.1\|517048_517939_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321010.1\|515184_515733_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155308705.1\|514849_515134_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_AP021876.1\|WP_155321007.1\|511586_511868_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|376852

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP021876.1\|WP_155321017.1\|527559_528684_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	3.4e-69	227.7	0.0
NZ_AP021876.1\|WP_155314103.1\|517919_518279_-\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	3.3e-37	121.4	0.1
NZ_AP021876.1\|WP_155321015.1\|524338_526294_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	1.5e-52	173.8	0.2
NZ_AP021876.1\|WP_173179020.1\|514470_514800_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	6.7e-16	53.0	0.0
NZ_AP021876.1\|WP_155308703.1\|513457_514474_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	2.4e-68	225.2	0.0
NZ_AP021876.1\|WP_155325894.1\|522192_523140_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	2.8e-65	215.4	0.0
NZ_AP021876.1\|WP_155321019.1\|529104_529770_-\|hypothetical-protein	cas6	mkCas0066_cas6_CAS-I:CAS-III	3.3e-55	182.3	0.1
NZ_AP021876.1\|WP_155321012.1\|520734_521814_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	1.1e-37	124.5	0.0
NZ_AP021876.1\|WP_155321008.1\|512643_513477_-\|Retron-type-reverse-transcriptase	RT	pfam00078_RT_CAS-I:CAS-III	4.8e-45	148.5	0.1
NZ_AP021876.1\|WP_155321018.1\|528826_529132_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	2.8e-34	113.5	0.0
NZ_AP021876.1\|WP_155321016.1\|526263_527547_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	6.3e-22	72.8	0.3
NZ_AP021876.1\|WP_155321013.1\|521817_522192_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	1.5e-27	91.1	1.9
NZ_AP021876.1\|WP_155321014.1\|523145_524342_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	1.2e-69	230.2	0.0
NZ_AP021876.1\|WP_155308705.1\|514849_515134_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	1.2e-18	62.0	0.1

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_155321017.1\|527559_528684_-\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	5.56655e-72
NZ_AP021876.1\|WP_155314103.1\|517919_518279_-\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	3.05704e-43
NZ_AP021876.1\|WP_155321011.1\|515832_516909_-\|hypothetical-protein	gnl\|CDD\|379583	pfam14362, DUF4407, Domain of unknown function (DUF4407). This family of proteins is found in bacteria. Proteins in this family are typically between 366 and 597 amino acids in length. There is a single completely conserved residue R that may be functionally important.	0.00309638
NZ_AP021876.1\|WP_155321015.1\|524338_526294_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.671e-42
NZ_AP021876.1\|WP_173179020.1\|514470_514800_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.11373e-11
NZ_AP021876.1\|WP_155308703.1\|513457_514474_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.56551e-79
NZ_AP021876.1\|WP_155325894.1\|522192_523140_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	7.89388e-67
NZ_AP021876.1\|WP_155321019.1\|529104_529770_-\|hypothetical-protein	gnl\|CDD\|187890	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex.	0.0003271
NZ_AP021876.1\|WP_155321012.1\|520734_521814_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.17825e-35
NZ_AP021876.1\|WP_155321008.1\|512643_513477_-\|Retron-type-reverse-transcriptase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	2.68407e-80
NZ_AP021876.1\|WP_155321018.1\|528826_529132_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	5.40248e-10
NZ_AP021876.1\|WP_155321016.1\|526263_527547_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.57806e-12
NZ_AP021876.1\|WP_155321013.1\|521817_522192_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	2.57086e-29
NZ_AP021876.1\|WP_155308698.1\|511293_511590_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.06644e-16
NZ_AP021876.1\|WP_155321014.1\|523145_524342_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	5.44009e-60
NZ_AP021876.1\|WP_155308705.1\|514849_515134_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.42043e-17
NZ_AP021876.1\|WP_155321007.1\|511586_511868_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	2.63876e-13

>NZ_AP021876.1|WP_155314103.1|517919_518279_-|CRISPR-associated-protein-Csx16
MERCHSNKNTTWFVTRHAGAQEWAFDEGLKVDQVVDHLDTDEVKKGDIVIGSLPVNMVASLNEKGVRYFHLILQIPREMRGKHLSADRMRSFGARIEEYVVVKRTKKIVDNDINENFAR
>NZ_AP021876.1|WP_155308708.1|517048_517939_-|hypothetical-protein
MKTSHAKGPSKKAFRQQHMKAVFLHMFGSRSIFSLFLVCVTLISLNWFGDTIWDILFDIDTFKSIKAWIGFLFFPLIIVSWYCYLIKTFKDTGNLSIHEYSPLPGCRALIVFLSPPTVDIALVDKYLSSSDTKKESENILSIRSEFKRGWRMPLEAIAYHVEKNTLETVIVIPSADTPSTEKKEDGTFRMVGKFTRLFEKSHKFEVLNAGEIHQRWMEGVNYESARDLRDCLHDLYTWLRQKQYADDDIIVDITSGQKVCASVASVMSLSIGRQVQYVSTQDYTVRAYNISYEASA
>NZ_AP021876.1|WP_155321011.1|515832_516909_-|hypothetical-protein
MHISWFFKSSWILQLLVGVGLFLCSFYIEYKILQAFIAPPSMAFFLSLTLEIGKVTAIVWHYHMSHLSVSAYPGSVRLISLLFRLGLVFLSLICSQLFLNDRLDRPNLKNVKAVETAAIEKRLNDDLKILDDQHLSQKETMIARHQAEYADLKAATDRTITKLEALLLAEMDNVVGGVFKGPRYEEFKQRLDDEKIAGQAALEKLQQRQAREIGQLSLNSRRLRQETLSMADKKQRQIIADDFSNDERVNDPYIVALLKVTESLFAATLEPLQFVFLFSLLMSFLMEVGIVLAFSTITVSIAPVLKAQHESALEEEVLMTQMGGEARRDDMAHQAAMDKISKAGKQTMEKAEQSLHAL
>NZ_AP021876.1|WP_155321010.1|515184_515733_-|hypothetical-protein
MTTQYTTDSSTNHVPDEAEERVSENECMVQKAVSRHQEAFIPTVFNRKERKLVRNQLMAELEQGFEHRRKALDLVLETRLHSIREACNHLLVRGKTQLRQQRTAYFSRVYEQVAQDIDQLSTRFLSDIDLRFQKLEQYKTDYVREREKKRLEKSVDDFLDTLDQLMDEFRHIAQENVDYQQV
>NZ_AP021876.1|WP_155308705.1|514849_515134_-|CRISPR-associated-endonuclease-Cas2
MKRKPIIIAYDITSNKRRRKLFRCLRSWKLDAQYSVFECLLTDDEAKELFLQLTNLMDLEEDSLLFTRLDPHREAAALTRCKEIGFKVPVLYEA
>NZ_AP021876.1|WP_173179020.1|514470_514800_-|CRISPR-associated-endonuclease-Cas2
MIAYDIRNEKRLRRLHYYLKKRAVALQKSVFLLHANTAQLKEVEGQIKIRIDDREDDVRRYPIYGPNAIWGAGMQAAALESLYTRSSGKSSKSGGLEGLFRKIFKRKRP
>NZ_AP021876.1|WP_155308703.1|513457_514474_-|CRISPR-associated-endonuclease-Cas1
MMLVIDRRESILLYKGGCLVLQRKGKKDRQIPVKPLEQVVIYGNPQVEAAVLRVLGEAGIPVAILPARGNQPPAFSGGGLAVQLPLRRRQHRLAEHPGRSLKMAKWFVQNKMNSYDLALATLRKLYPEKAEGLVDFCRMRDRTTESLQSAPSHASIMGLEGQLAHAWFSLLSKQLPDKWKFIGRNRRPPRDPVNALLSLGYTLLLSEVTRCVQYAGLDPSLGFLHRDYPGRESCALDFTEVFRSGVDCFVLTWLASDQIDSEGFYYREKTGCRLSKTARPIFYQAWAYYREEWPRPGGLITENAEVHFGSLRECVNGHIAKARKYMKQLEEQNEGIPA
>NZ_AP021876.1|WP_155321008.1|512643_513477_-|Retron-type-reverse-transcriptase
MKASLLDQAMAPETLDAGWRKLRREHTPWSIHVSREQLQQHLLKHILECRSQVLSGRYRPQPLRQFPLQKPDGKQRVLSAQYLKDKFVQRALLTVLEPRSEAIFHDDSFAYRPGRSVAMALAKVRERVRIGQAWLVDADISKFFDTIPHRQLVKLLKGFINDSQAMQLIEKWLSQGAHHRSLLRSPRGISQGAILSPLFCNLYLHTFDMALTKANIPFVRFADDFLLFSRVKKDAIKAMHFAKEVLEELGLELHPGKTRIVRSGKSVVFLGERLPDP
>NZ_AP021876.1|WP_155321007.1|511586_511868_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MQRLKISQDIKPLSEFRTGIANFIKQVHDTKRPVIITQHGKGVAVLLDVHEYETMQEKLELLSDVQISLNQLENGEGVLHEDAKQSILRRIQK
>NZ_AP021876.1|WP_155308698.1|511293_511590_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKIVWSPLAIERASEIAEYIAQDKPSAAEKWLDTIFTKVETLKSAPEIGRVVPEIRNSQFRDLIYGNYRIIYRIEEKQISILTIRHGMQILPIDEILV
>NZ_AP021876.1|WP_155321012.1|520734_521814_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MVLPLYQENSFVSNYASGNMGLVFERFFNKFDAGYNKIQADRKIEWLRQFNKNIGDQKILESFANQQCLLTKALGGEYRVFDTAYHFVTGMGYSHPVENGFAWHPILGVPYLTGSTIKGMVRAWVENWEDDQSDKDRLLQWFGSTSKNPTEISYESQTGDIIFFDAIPTEPVKLVTDIMTPHMGRWYAEGDQINNIDSDAEKIPADWHDPIPIPFLVVEKASFLFSVAPRNPTVMERTNIDQVIESLGLALEWLGAGAKTASGYGQMISNDKHDLVIAGKSLEEQVRIEVDSWSDLKITENIGKNYNKIIKSKGKVWWVIAMKHLSETKADLINGWSKEPKGSLKKKAFNKLKKSHNEL
>NZ_AP021876.1|WP_155321013.1|521817_522192_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MLQTIQQKRAEYALKKVQEAANDLQLKKEKDEFKSYASALPAMIHMNGLGQAAAFYKSQGGRHEHLYNLLSGWLTQDNQPYAGNDNLLDGIVNNNMHTYRLAQAEAQKLMTWVKMLAKAYITGE
>NZ_AP021876.1|WP_155325894.1|522192_523140_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MQKNSAILGLLAQTSIHAGTGQQIGFIDLPIQREGHSGWPCIFGSSVKGALRTNAEQKKIEYLKSNGTVIQTQEEYAEKVQNSEDIAVVFGPSTNNASDHAGALIVSDAKLLLMPVRSLTSHFKWVTCPYGLTRYQQDCLRLGIAGQSFKVPPVNDSEALVHVTATEDSLFLEEYRFQTKRIDFNQGPIKALSNLMTMENATDLLRTQLVLVSNNSFVHLVNHTTPVNAHIAIETQTKTVKEGALWYEETLPPETLLYVSLFANDARNGNSSMPAETILGMATNLFSERPWLQVGGNETVGMGWCGVKTLSQEGV
>NZ_AP021876.1|WP_155321014.1|523145_524342_-|type-III-B-CRISPR-module-associated-protein-Cmr3
MNKKTWRITPLDSWFFRESRPMESIGGSELGSVFPPPTRTLIGAIRTAIGNHHNVDWVSYETDPKFEKLRDQIGVDDDFKSIKVHGVWLSQKKGANWKRLFPAPRNLVYTQKAGKMSEVIRLQVGQARYCDLGQKVRMAVAPNGISGINGVENHWVNEETLASVLNGRDISSGVIISSQELYEEEPRLGIARDNQIRNVEEGRLYQTRHIRMKPGVAVEIDVSGIDESFIPPSGILRLGGEGRGAAFEVIDNTSVNIKLEKEQSQVSGLIVTLLAPMYVEQDQSSYTPFPGFKKMETDKQTVWKGHINGKSYSLHCAVIGKPMREGGWSMQKKQPRQVRSLIPPGSVFYLTPEELDPIEAIDKIHMTQLDGNKIDNALGYGLVAAGIWNESNVAKEEI
>NZ_AP021876.1|WP_155321015.1|524338_526294_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MGKKYFHFTIGPVQGFVAQARRTRDFWAGSFILSLLSAIAVKAVAAQKYSKILFPAADQNFIGWLEGNEMGPRPEQGAVPNRFKAEVDVQIFQPQLVIDTVNAAWCALSEIIYKNDVAEYAATETEQIWNRQVSTFWEMSWVIADNKGDSAILDQRKNWRAHLPPDEPGVKCMMMDGLQELSGAISPVMPHGNHLKQFWKKLREQGKKGMKSDLRADEHLCAIGFIKRRFPRYFEEMNCPMPNGWQLKGWQVDSGRPSAPFMAAVRWLEKVLKKAQQSDTVKTKLEDFHDKAFKLTEEYGEWENNIRCIKETNLPQIWKALDGNVFFESALENKNVFENQEQAKEVKTMLKALRRSADMPQVTPFYAVLVMDGDSLGVQMSSLEKQTPITEGLKTFTTGVSRIVYEKNGFLIYAGGDDVLAVLPLEDSIDCALSIRQFYETCFHGKEVKTTLSGSIVYAHIKMPLARVLKNAHKLLDEVAKDACGRDSLAIQVLKPGGVNVQWAMPWEKAWEDSVDNNIPKRLKLSTIADEFMQDDDKTGQFSSRFFYKIRERFDLLNAGDGSTETILDPLTHGVDLMAADYFSSGLCDKIKNKDQRLFHARKVVAPLIDQCLPRYRDATDPSNPRYEEVGIINPDGAMIVRFLVHKGVLP
>NZ_AP021876.1|WP_155321016.1|526263_527547_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MPEKRRLTAKYEIATPMFIGDANQNAKMVSPSSVKGALRFWWRALHWSEFRNNANSDVDALISLHNKESSLFGRESKVVKNKQLGGQGKFLLRVKTKNIQCKSIADLNQDSPYSLGILSWQSYLLGLGLMEYDRDSKRNKYHRSAIISGSFSVELYFRDKDAIDELKPVLLTWGMLGGLGSRNRKGLGSVNIVSLNGENIPDDRDTYIKYLKQIIKPNSFRDELPPYTAFSKKVKVLVSPEKYSSTWEALGSVGETMQKFRGWGYQNPRDNVHYIRPKVKAIHDSYTNKENDHNLVYQIATGNAPKKYPKSIVFGLPKMYNLSRAGEVKLEPEARDNDGQPDQNNKRSRRASPLFIHIHMFDQKAFIVQVFLPATFLPKNDVIPLGDDVDAKLQKPTDWVAMDEYIAQSDFKGWEVKLWEKNISTLP
>NZ_AP021876.1|WP_155321017.1|527559_528684_-|TIGR02584-family-CRISPR-associated-protein
MKEPHQFSRRILLVIIGKTPQIFTETLYKLSVKNTPLFIPTETHIITTKEGARSANLALLGVGKRHGEFHRFCADFGFTDIRFDSEHIHIIADTEGQFIDDNQSTAHNKVASDFITDKVREFTLDDNSALHLSLAGGRKTMSFYAGYALSLYGRMQDRLSHVLVNEPFQNNPDFFYPRPKPKRIEIGNTYYSTDEAKIILSDIPYVRMRYQVPEGLLNGNAGFQATVDIIQRFAQPETIEIDIVQKRLMLNGIEVPMPNADLAFYLWMCERKKSGEPPLIPDEDAFVPDYLKVYGKIVSDWSGMYERAEEIAKNRDVDEQKNWFQQRKSKVKKRIETVLGERAAKPFLIQTIERNGEVAYEVGVSAETMKIQGR
>NZ_AP021876.1|WP_155321018.1|528826_529132_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLRRVSTILKSYNGGEPPLDYRGLTQRAEVVRTVDSTLHWNNLKRYSNRQKQKTPLDGMMGTITYEGALGEFWPLIEFCEKTNVGAKTAFGLGEITVVKLN
>NZ_AP021876.1|WP_155321019.1|529104_529770_-|hypothetical-protein
MLYGRYEFRCRFQSDARLPLYKGSTIRGAFGHAFKSVVCILKHQACETCLLKSQCIYTKVFETHLAGSPPAGMRIADVPHPFVIRPPLTTRMAFKKGDIFVFSLLLFGDVNHQLPYFFIRILERMGNLGIGKKINDRTGRFTMETVSHNGRIVYSQEDQKLRMDEDLPRLTLSTPPEKANSRNRVMIQLNTPLRLKFKTDMPPSFPFIFSQELCFAGSPPY
>NZ_AP021876.1|WP_155321020.1|529826_529991_-|hypothetical-protein
MSTLASGLSFSLVHETLRFRLCMRTLAVLLPYKGALLLNALGEHLCAPGKTGPA

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Crispr_ID: NZ_AP021876_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_2

531355-531706

TypeIII

Consensus_repeat	Method
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	CRISPRCasFinder
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	CRT
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	PILER-CR

4 spacers

cas6,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7

The CRISPR arrays of NZ_AP021876_2

>merge|NZ_AP021876|2|531355-531706|CRISPRCasFinder,CRT,PILER-CR
ATCCCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACTTCATGACCAGAACGGGAGTAGAATCTCCCCTCTTTGTACGTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACAAAACTGCTCCGCCGGCTTCTGAAGAAGCAATTCAAGTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACCTTTTTGGGTACCGTTCCAGTGTTGCGATGACGCTCTGGGGATGTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACCCAGACGGTCAAGGATACCCTTCAGTACTTTGAAAAGGACATCTCAAAGTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC

>NZ_AP021876|2|2|531355-531706|CRISPRCasFinder
ATCCCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	TTCATGACCAGAACGGGAGTAGAATCTCCCCTCTTTGTAC
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	AAAACTGCTCCGCCGGCTTCTGAAGAAGCAATTCAA
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	CTTTTTGGGTACCGTTCCAGTGTTGCGATGACGCTCTGGGGAT
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	CCAGACGGTCAAGGATACCCTTCAGTACTTTGAAAAGGACATCTCAAA
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC

>NZ_AP021876|2|2|531355-531706|CRT
ATCCCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	TTCATGACCAGAACGGGAGTAGAATCTCCCCTCTTTGTAC
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	AAAACTGCTCCGCCGGCTTCTGAAGAAGCAATTCAA
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	CTTTTTGGGTACCGTTCCAGTGTTGCGATGACGCTCTGGGGAT
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC	CCAGACGGTCAAGGATACCCTTCAGTACTTTGAAAAGGACATCTCAAA
GTCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC

>NZ_AP021876|2|3|531356-531706|PILER-CR
TCCCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACT	TCATGACCAGAACGGGAGTAGAATCTCCCCTCTTTGTACG
TCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACA	AAACTGCTCCGCCGGCTTCTGAAGAAGCAATTCAAG
TCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACC	TTTTTGGGTACCGTTCCAGTGTTGCGATGACGCTCTGGGGATG
TCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAACC	CAGACGGTCAAGGATACCCTTCAGTACTTTGAAAAGGACATCTCAAAG
TCTCAATCGCCCGAAGGCTCTGCTTATCGCTGCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_155321025.1\|539999_540938_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376493
NZ_AP021876.1\|WP_155325894.1\|522192_523140_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_AP021876.1\|WP_155321018.1\|528826_529132_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_AP021876.1\|WP_155308720.1\|534595_535420_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270347
NZ_AP021876.1\|WP_155321015.1\|524338_526294_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_AP021876.1\|WP_155321020.1\|529826_529991_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321016.1\|526263_527547_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
NZ_AP021876.1\|WP_155321012.1\|520734_521814_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_AP021876.1\|WP_155321019.1\|529104_529770_-\|hypothetical-protein	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|187890
NZ_AP021876.1\|WP_155321026.1\|541073_542285_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_AP021876.1\|WP_155321027.1\|542297_545468_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_AP021876.1\|WP_155321022.1\|535599_536610_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_AP021876.1\|WP_155321021.1\|531949_534076_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235930
NZ_AP021876.1\|WP_155321017.1\|527559_528684_-\|TIGR02584-family-CRISPR-associated-protein	csx1	pfam09623_csx1_CAS-III	gnl\|CDD\|187872
NZ_AP021876.1\|WP_155321013.1\|521817_522192_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NZ_AP021876.1\|WP_155321028.1\|545472_546882_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|182103
NZ_AP021876.1\|WP_155321014.1\|523145_524342_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
NZ_AP021876.1\|WP_155321024.1\|538844_539981_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188425
NZ_AP021876.1\|WP_155321023.1\|537321_538650_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240665
NZ_AP021876.1\|WP_155308722.1\|536606_537338_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_155321025.1\|539999_540938_+\|hypothetical-protein	gnl\|CDD\|376493	pfam01208, URO-D, Uroporphyrinogen decarboxylase (URO-D).	8.59459e-13
NZ_AP021876.1\|WP_155321018.1\|528826_529132_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	5.40248e-10
NZ_AP021876.1\|WP_155308720.1\|534595_535420_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270347	cd13629, PBP2_Dsm1740, Amino acid-binding domain of the type 2 periplasmic binding fold superfamily. This subfamily includes the periplasmic binding protein type II (BPBII). This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBPII proteins share the same architecture as periplasmic binding proteins type I (PBPI), but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBPII proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	1.97662e-118
NZ_AP021876.1\|WP_155321015.1\|524338_526294_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.671e-42
NZ_AP021876.1\|WP_155321017.1\|527559_528684_-\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	5.56655e-72
NZ_AP021876.1\|WP_155325894.1\|522192_523140_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	7.89388e-67
NZ_AP021876.1\|WP_155321019.1\|529104_529770_-\|hypothetical-protein	gnl\|CDD\|187890	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex.	0.0003271
NZ_AP021876.1\|WP_155321026.1\|541073_542285_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	6.86301e-115
NZ_AP021876.1\|WP_155321021.1\|531949_534076_-\|6-phosphofructokinase	gnl\|CDD\|235930	PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional.	3.38904e-140
NZ_AP021876.1\|WP_155321022.1\|535599_536610_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.41162e-82
NZ_AP021876.1\|WP_155321012.1\|520734_521814_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.17825e-35
NZ_AP021876.1\|WP_155321027.1\|542297_545468_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_AP021876.1\|WP_155321016.1\|526263_527547_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.57806e-12
NZ_AP021876.1\|WP_155321013.1\|521817_522192_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	2.57086e-29
NZ_AP021876.1\|WP_155321028.1\|545472_546882_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|182103	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein.	8.70431e-101
NZ_AP021876.1\|WP_155321014.1\|523145_524342_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	5.44009e-60
NZ_AP021876.1\|WP_155321024.1\|538844_539981_+\|radical-SAM-protein	gnl\|CDD\|188425	TIGR03910, biotin_synthase, pyrrolysine biosynthesis radical SAM protein. This model describes a radical SAM protein, PylB, that is part of the three-gene cassette sufficient for the biosynthesis of pyrrolysine (the twenty-second amino acid) when expressed heterologously in E. coli. The pyrrolysine next is ligated to its own tRNA and incorporated at special UAG codons. [Amino acid biosynthesis, Other].	1.34282e-112
NZ_AP021876.1\|WP_155321023.1\|537321_538650_-\|hypothetical-protein	gnl\|CDD\|240665	cd12189, LKR_SDH_like, bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme. Bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Along with formate dehydrogenase and similar enzymes, SDH consists paired domains resembling Rossmann folds in which the NAD-binding domain is inserted within the linear sequence of the catalytic domain. In this bifunctional enzyme, the LKR domain is N-terminal of the SDH domain. These proteins have a close match to the active site motif of SDHs, and an NAD-binding site motif that is a partial match to that found in SDH and other FDH-related proteins.	0
NZ_AP021876.1\|WP_155308722.1\|536606_537338_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.66342e-155

>NZ_AP021876.1|WP_155321020.1|529826_529991_-|hypothetical-protein
MSTLASGLSFSLVHETLRFRLCMRTLAVLLPYKGALLLNALGEHLCAPGKTGPA
>NZ_AP021876.1|WP_155321019.1|529104_529770_-|hypothetical-protein
MLYGRYEFRCRFQSDARLPLYKGSTIRGAFGHAFKSVVCILKHQACETCLLKSQCIYTKVFETHLAGSPPAGMRIADVPHPFVIRPPLTTRMAFKKGDIFVFSLLLFGDVNHQLPYFFIRILERMGNLGIGKKINDRTGRFTMETVSHNGRIVYSQEDQKLRMDEDLPRLTLSTPPEKANSRNRVMIQLNTPLRLKFKTDMPPSFPFIFSQELCFAGSPPY
>NZ_AP021876.1|WP_155321018.1|528826_529132_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLRRVSTILKSYNGGEPPLDYRGLTQRAEVVRTVDSTLHWNNLKRYSNRQKQKTPLDGMMGTITYEGALGEFWPLIEFCEKTNVGAKTAFGLGEITVVKLN
>NZ_AP021876.1|WP_155321017.1|527559_528684_-|TIGR02584-family-CRISPR-associated-protein
MKEPHQFSRRILLVIIGKTPQIFTETLYKLSVKNTPLFIPTETHIITTKEGARSANLALLGVGKRHGEFHRFCADFGFTDIRFDSEHIHIIADTEGQFIDDNQSTAHNKVASDFITDKVREFTLDDNSALHLSLAGGRKTMSFYAGYALSLYGRMQDRLSHVLVNEPFQNNPDFFYPRPKPKRIEIGNTYYSTDEAKIILSDIPYVRMRYQVPEGLLNGNAGFQATVDIIQRFAQPETIEIDIVQKRLMLNGIEVPMPNADLAFYLWMCERKKSGEPPLIPDEDAFVPDYLKVYGKIVSDWSGMYERAEEIAKNRDVDEQKNWFQQRKSKVKKRIETVLGERAAKPFLIQTIERNGEVAYEVGVSAETMKIQGR
>NZ_AP021876.1|WP_155321016.1|526263_527547_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MPEKRRLTAKYEIATPMFIGDANQNAKMVSPSSVKGALRFWWRALHWSEFRNNANSDVDALISLHNKESSLFGRESKVVKNKQLGGQGKFLLRVKTKNIQCKSIADLNQDSPYSLGILSWQSYLLGLGLMEYDRDSKRNKYHRSAIISGSFSVELYFRDKDAIDELKPVLLTWGMLGGLGSRNRKGLGSVNIVSLNGENIPDDRDTYIKYLKQIIKPNSFRDELPPYTAFSKKVKVLVSPEKYSSTWEALGSVGETMQKFRGWGYQNPRDNVHYIRPKVKAIHDSYTNKENDHNLVYQIATGNAPKKYPKSIVFGLPKMYNLSRAGEVKLEPEARDNDGQPDQNNKRSRRASPLFIHIHMFDQKAFIVQVFLPATFLPKNDVIPLGDDVDAKLQKPTDWVAMDEYIAQSDFKGWEVKLWEKNISTLP
>NZ_AP021876.1|WP_155321015.1|524338_526294_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MGKKYFHFTIGPVQGFVAQARRTRDFWAGSFILSLLSAIAVKAVAAQKYSKILFPAADQNFIGWLEGNEMGPRPEQGAVPNRFKAEVDVQIFQPQLVIDTVNAAWCALSEIIYKNDVAEYAATETEQIWNRQVSTFWEMSWVIADNKGDSAILDQRKNWRAHLPPDEPGVKCMMMDGLQELSGAISPVMPHGNHLKQFWKKLREQGKKGMKSDLRADEHLCAIGFIKRRFPRYFEEMNCPMPNGWQLKGWQVDSGRPSAPFMAAVRWLEKVLKKAQQSDTVKTKLEDFHDKAFKLTEEYGEWENNIRCIKETNLPQIWKALDGNVFFESALENKNVFENQEQAKEVKTMLKALRRSADMPQVTPFYAVLVMDGDSLGVQMSSLEKQTPITEGLKTFTTGVSRIVYEKNGFLIYAGGDDVLAVLPLEDSIDCALSIRQFYETCFHGKEVKTTLSGSIVYAHIKMPLARVLKNAHKLLDEVAKDACGRDSLAIQVLKPGGVNVQWAMPWEKAWEDSVDNNIPKRLKLSTIADEFMQDDDKTGQFSSRFFYKIRERFDLLNAGDGSTETILDPLTHGVDLMAADYFSSGLCDKIKNKDQRLFHARKVVAPLIDQCLPRYRDATDPSNPRYEEVGIINPDGAMIVRFLVHKGVLP
>NZ_AP021876.1|WP_155321014.1|523145_524342_-|type-III-B-CRISPR-module-associated-protein-Cmr3
MNKKTWRITPLDSWFFRESRPMESIGGSELGSVFPPPTRTLIGAIRTAIGNHHNVDWVSYETDPKFEKLRDQIGVDDDFKSIKVHGVWLSQKKGANWKRLFPAPRNLVYTQKAGKMSEVIRLQVGQARYCDLGQKVRMAVAPNGISGINGVENHWVNEETLASVLNGRDISSGVIISSQELYEEEPRLGIARDNQIRNVEEGRLYQTRHIRMKPGVAVEIDVSGIDESFIPPSGILRLGGEGRGAAFEVIDNTSVNIKLEKEQSQVSGLIVTLLAPMYVEQDQSSYTPFPGFKKMETDKQTVWKGHINGKSYSLHCAVIGKPMREGGWSMQKKQPRQVRSLIPPGSVFYLTPEELDPIEAIDKIHMTQLDGNKIDNALGYGLVAAGIWNESNVAKEEI
>NZ_AP021876.1|WP_155325894.1|522192_523140_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MQKNSAILGLLAQTSIHAGTGQQIGFIDLPIQREGHSGWPCIFGSSVKGALRTNAEQKKIEYLKSNGTVIQTQEEYAEKVQNSEDIAVVFGPSTNNASDHAGALIVSDAKLLLMPVRSLTSHFKWVTCPYGLTRYQQDCLRLGIAGQSFKVPPVNDSEALVHVTATEDSLFLEEYRFQTKRIDFNQGPIKALSNLMTMENATDLLRTQLVLVSNNSFVHLVNHTTPVNAHIAIETQTKTVKEGALWYEETLPPETLLYVSLFANDARNGNSSMPAETILGMATNLFSERPWLQVGGNETVGMGWCGVKTLSQEGV
>NZ_AP021876.1|WP_155321013.1|521817_522192_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MLQTIQQKRAEYALKKVQEAANDLQLKKEKDEFKSYASALPAMIHMNGLGQAAAFYKSQGGRHEHLYNLLSGWLTQDNQPYAGNDNLLDGIVNNNMHTYRLAQAEAQKLMTWVKMLAKAYITGE
>NZ_AP021876.1|WP_155321012.1|520734_521814_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MVLPLYQENSFVSNYASGNMGLVFERFFNKFDAGYNKIQADRKIEWLRQFNKNIGDQKILESFANQQCLLTKALGGEYRVFDTAYHFVTGMGYSHPVENGFAWHPILGVPYLTGSTIKGMVRAWVENWEDDQSDKDRLLQWFGSTSKNPTEISYESQTGDIIFFDAIPTEPVKLVTDIMTPHMGRWYAEGDQINNIDSDAEKIPADWHDPIPIPFLVVEKASFLFSVAPRNPTVMERTNIDQVIESLGLALEWLGAGAKTASGYGQMISNDKHDLVIAGKSLEEQVRIEVDSWSDLKITENIGKNYNKIIKSKGKVWWVIAMKHLSETKADLINGWSKEPKGSLKKKAFNKLKKSHNEL
>NZ_AP021876.1|WP_155321021.1|531949_534076_-|6-phosphofructokinase
MPENTTVRLDKLFDHPAVIDAVADENLELKERVAYRPPVCEVFNRTCTTLQTEPQYQFEIDKEARRQLSHIIGNTVQRVAGTDDPDEAVRAGYTKARNIGIVFSGGPAPGGHNVIAGLFDAAKKANPATRVFGFLMGPDGIIDADYMELTAPLVDRYRNVGGFTMIRTGRTKIDNQKKMSLSRETCKRLDLDALVVVGGDDSNTNAAFLAQEMFNDDIQVIGVPKTIDGDIQVRDACGQVLCAMSFGFHTAARAFSQAIANLCTDSSSDVKYWHVCKVMGRVASHLALEVALQTHANMTLVGEDLADYVDYDRLEKAEKDGQVDYTAYGMTLRHLSRVICDAIMDRAAVGKNYGVLVVPEGVLEFINEIQVFIIKLNTIIGNYNKVHDRDFHTAFPALDDKLEYLRRLVRGIRKDVSYNVWNARDDELFNDIPEFFQEGLLTERDSHGNFQFSQVETEKVLLDLVKDYLGILKEKGRYKIGIEEGQYAKIMQTGGLDPEMYGPILFDNWKQARYLMIKKMIISKKTLKAALVKDGFLGEEDAIPAPIEKIYELSVPKFKTQTHFYGYDGRGSDPTRFDCIYTYNLGRTVFSLIANGATGQMAAILNLEQDFHNWRPIGIPIAPLMHLEERKGRLELVLEKSIVDVNAPAFRVVKAFREKWLAASPDGDHYRHPGPIRFTGTSEEDRPITLLLNALGGHMCAPGESGPA
>NZ_AP021876.1|WP_155308720.1|534595_535420_+|transporter-substrate-binding-domain-containing-protein
MKRGLFTPLAILAALAFCLGPAFGADIELAKKSHIQKILSRGELRVGFESGYMPFEMTNKKGDFIGFDIDFAKRMAKAMGVKFVPVNTSYDGIIPALVTDKFDIIMSGMTITQERNLKVTFADPYIVVGQTILLNNKHAGTVKSYKDLNDPKYTLTSRMGTTGEQSIKRMIPKATYKGFESEAEAGLEVINGKADALVYDLPFIGILYASQGQGRTVFLDKPFTYEPLAWAINPGDPDFLNFLNNFLSQSKGDGFYEKVYNKWILSSDWKKELQ
>NZ_AP021876.1|WP_155321022.1|535599_536610_+|ABC-transporter-permease-subunit
MNETTQQRITAKPANYNRWVVIFCLGVLVFLGLFYYATQKIQYVWRWNRTPIYFAYQDDIDITSTIDGEVSAIAIDGSKARITVLGIGEEETYVVPAKGLRVDQGDFISPGDTLASYKKWKPGLLVVGLWITLKISVLATIVGVIIGIISGLMRISDNPALRWTSIVYVELIRGSPLMVQILVWYFVLGTLINDLLSANGWGQIPALWYGVASLACFAGAYVSEIVRGGIQSIHRGQTEAARSLGMNYAQSMRYIILPQALRRILPPLAGQFISLIKDSSLLGIIAIRELTKAAREAVTATLQPFEVYILLGLLYLVLTFSLSMYVQYLERRMATS
>NZ_AP021876.1|WP_155308722.1|536606_537338_+|ATP-binding-cassette-domain-containing-protein
MIQAKNVFKTFYAPHAINALVDVSANIAAGEVVVVIGPSGSGKSTFLRCLNRLEHATSGHIYIDGLDVLDRRTDINKVRAEVGMVFQSFNLFPHKTVLENVTLAQKVVRKRSGNAARQKAMTLLEKVGISDKINVFPDQLSGGQQQRVAIARALAMEPKVMLFDEPTSALDPEMIGEVLDVMKTLAREGMTMVVVTHEMGFAREVADRVIFMDAGAIVEEGTPEHFFTNPTHDRTKLFLSQIL
>NZ_AP021876.1|WP_155321023.1|537321_538650_-|hypothetical-protein
MKTLLIRAEDKNRWERRAPLVPDDLAKIVTATGVKALVEQSEKRFFSREQYTAAGAEPCQGMGKGEVVLGVKEIPIEKILDRKTYVFFSHTIKGQKANMPLLRRIIDGSCTLIDYEKITDADDRRLIYFGPYAGDAGAIDILSLMGEHWAAKGIDTPFAAFRRAHQYDSVADARAHLTEIGRQIGKDGLPEAICPFSVGILGYGNVSKGAQQIFDCLPTERVEPDAVGAQLRPDRANRHTVYITIFKESDLVQPKAHGAGFDLAEYYHHPERYESRFEPYLPFFTLLVNAVYWESRYPRFVTWAGLKRLAGTRTPPKLCGIADITCDTNGSIECNVKSTDSDMPAYLVDPLTGTTRDGHLGDGIVLLAVDNLPCELPNDSSTFFSNQLRPFIPGLLGADFSKPLEESGLPEALQKAVIVYNGRLTPRFAYLQEHLSSSIISD
>NZ_AP021876.1|WP_155321024.1|538844_539981_+|radical-SAM-protein
MKRDLWAGVQSGSGLRQGREALYAMLDQAAVTAGIPPSAMIRLLDSPTPELLNRLFTAARSQRERHFGTRVYLYGTLNISTHCRQRCSFCYFRKTNRLARRYRQPLPQVVDQARCLAASGVHLINLTGGEDPFFFDDGLHGFDPLVEMVRAVSTDTGLPVMISMGVLPGAVMPRLHAAGAVWYACYQETYNRQRFGQLRVGQDFDQCYQSKMTARQNGLLVEDGVLCGTGETSRDLLDAFTAMARLGASQVRATTFVPLVGTPMHDEAPSSSLRTSIAIALLRITYPDLLIPAPLDWGGMADLREHLNAGANVVAGLVTPGSDAGELPMARSEQRTMEGIACTLRGCGLAPASADTYRDRVLRHSPIETRKASGEVFS
>NZ_AP021876.1|WP_155321025.1|539999_540938_+|hypothetical-protein
MDAAQRVMQVIRRRRGAGIPTGELTMERAFMESLLAWNGDFPAPATLSETRLIIECARLLSHDVICLQSQPPGGGDGDGDPAARAGEIARVADENFFVFWIVNGAFQQVMYSSDFVTFMTAIAVSPDAIAGEMAAVSKQVIATIELGARHGAHGIILADDIAYQKSTYMSPAFGERYLLPLWKQQVAAAKAVGMPVFFHSDGNLNHFLPFIVAAGFDGLQCIESSAGMDIFKIGQTYGDRLCLMGNIDSALLCPTASPDVENGEPLALDRAVNDLNAAFGRSGGLILGTSGGLHSGMSFDLVMRMAALVPNV
>NZ_AP021876.1|WP_155321026.1|541073_542285_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MQPFLVTMRTTLLAVVSGLLLAGCQEQKQSPGGAAPPPPPQISVIAVQPQRVLLTTQLPGRSSAYRVAEIRPQVNGLIQKRMFVEGANVKAGDVLYQIDPASFQAALNNAEAALGRSEANLPAARSRAERYRELLVEKAVSQQDYDDAAAALKKAEADVQYWNAALETARINLAYTRITAPISGRIGRSSVTEGAIVTAYQPVALAIIQQLDPIYVDVPLSTTDLMRMKRSLKNGQLRGTGKTMEAVTLILDNGSSYAHEGTLQFRDVTVDPTTGSVIQRVVFPNPNGLLLPGMFVRAVMREGVAEKAILIPQQSISRDPKGHPVALVAGAGDTVERRMLTLDRAIDDQWLVSDGLAAGDRLIVEGIQKVRPGTVVAAVPYDDGGETKGTTPAAATEAAGPTN
>NZ_AP021876.1|WP_155321027.1|542297_545468_+|efflux-RND-transporter-permease-subunit
MLSKFFLARPVFAWVIAIVMMVAGGLAIYNLPISQYPPIAPPSIAIESFYAGASAETVENSVTQIIEQKMTGFDDMLYLSATSDSSGASRIELTFTPGTDPDLAWAKVQNKLQLAMASLPEAVQSQGVTVSKSTRNYLLIVGLVSEDGSMDGNDLRDYAQSNLEKVLARVPGVGEVTTFGSQYAMRIWLDPDRLTDYRLTIQDVITALRAYNVEISAGQFGGAPAVEGQRLNASIIVQNLLKTPDEFAAIPLRINPDGSVIRVRDVGRTELGTEQYDVQAHHNGQPAGGLAIRQSAGANALATARAIREKLDEMSRYFPEGMKVVYPYDTTPFVAVAIKEVFKTLFEAIILVFLVMYLFMGNIRATLIPTIAVPVVILGTFAVLGLFGFSINMLTMFAMVLAIGLLVDDAIVVVENVERIMSDEGLSPLDATAKSMDQITSALIGIGLVLSAVFGPMAFFPGSTGVIYRQFSITIIASMLLSVLVALILTPVLCASLLKPVPAGHEPADHAIFFMRPFFRWFDRFFFRSRTLYLKLVEHSLRRRLRYVFVFLLIVVAMVVLFRQMPTAYLPEEDQGILFVQAMLPANSTLEQTKAVLERVKTHFLEEQSEAVESLMTVSGYSFSGRGQNVGMAFVRLRDWELRNRPDLKVNAVAGKAMGTFSQIKNAMVFAFPPPAVIELGQANGFDFQLLDRGGAGHASLVAARNQLLGIAGQDTRLTRVRPNGLEDVPQYRIDVDWEKAGALGVPIAQIHRTISAAFGSAYVNDFIQAGRVKRVYIQADAPFRRLPGDLEKLYVRNMSGKMVPFASFASGHWTSGSPKLERFNGFPSINIWGEPVHGKSSGEAMQAMEEAVAQLPRAFGYDWTGLSYQERMAGSQAPILYAFSILVVFLCLAALYESWPIPISILMTLPLGVIGGVLASTMMDLPNDVYFQIGLLTILGLTTKNAILIVQFARARVDEGMRLIDATLEGAKLRLRPIVMTSLAFGFGVLPLALASGAGAGAQQAIGIGVLGGVVTSTFLVTLFAPLFYVIIYKLLGRHRKRERVQPAAVSPAEK
>NZ_AP021876.1|WP_155321028.1|545472_546882_+|efflux-transporter-outer-membrane-subunit
MNRILLILLCSLTLFSGCAVIPPYTPPETLVPDAWPTGPAYRDGSLTDEPVAADLPWPEFYTDARLRAVIETALANNRDLRLAALNVARAQAIYGIQRSALYPALDATANGSKKRIPADISSSGESYTAKQYDVNLGILSWEIDFFGRIRSLKEQALQSYLATEEARRSARILLIASVARAYLTLAADQENLRLAQTTFENQKSAHDLIKRRQEVGLGSELDLNRARTQVDIARVDIARYTRLVAQDRNALNLLAGTLQPLTEAHLPADLASVAPLGGIGAGLSSMVLLNRPDILQAERMLKAANANIGAARAALFPRISLTTTIGTASADLHNLFTAGQDTWLFAPQVSMPIFDARLWAALDATKAEREIAITQYQKAIQTAFREVADALAVEGTVDQQLSAQKALVRSAAETYRLSDARYTKGIDSYLGVLDAQRSLYTAQQALVAMNLVKLTNQVQLYAALGGGAR

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Crispr_ID: NZ_AP021876_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_3

548556-548644

TypeI-C,TypeI-U

Consensus_repeat	Method
GGCCATGGCCGTGGCGGAGAAGGCCC	CRISPRCasFinder

1 spacers

WYL,cas3,cas5,cas8c

The CRISPR arrays of NZ_AP021876_3

>merge|NZ_AP021876|3|548556-548644|CRISPRCasFinder
GGCCATGGCCGTGGCGGAGAAGGCCCGCGAACGGGTTACGGTGGCCAAGCGGATGGCCAAGGCGGCCATGGCCGAGGCGGAGAAGGCCC

>NZ_AP021876|3|3|548556-548644|CRISPRCasFinder
GGCCATGGCCGTGGCGGAGAAGGCCC	GCGAACGGGTTACGGTGGCCAAGCGGATGGCCAAGGC
GGCCATGGCCGAGGCGGAGAAGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_155321029.1\|546980_547664_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380065
NZ_AP021876.1\|WP_155321025.1\|539999_540938_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376493
NZ_AP021876.1\|WP_155308731.1\|549582_550017_+\|iron-sulfur-cluster-assembly-scaffold-protein	unknown	unknown	gnl\|CDD\|143480
NZ_AP021876.1\|WP_155308722.1\|536606_537338_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051
NZ_AP021876.1\|WP_155308735.1\|555955_556159_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP021876.1\|WP_155321035.1\|562173_563949_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_AP021876.1\|WP_155321022.1\|535599_536610_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_AP021876.1\|WP_155308738.1\|561514_562177_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_AP021876.1\|WP_155321026.1\|541073_542285_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_AP021876.1\|WP_155321030.1\|550278_551529_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_AP021876.1\|WP_155321032.1\|554375_555347_+\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP021876.1\|WP_155320792.1\|559230_561393_+\|IS701-family-transposase	unknown	unknown	gnl\|CDD\|372975
NZ_AP021876.1\|WP_155321027.1\|542297_545468_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_AP021876.1\|WP_155321033.1\|556484_558737_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_AP021876.1\|WP_155321031.1\|551572_553699_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321028.1\|545472_546882_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|182103
NZ_AP021876.1\|WP_155321034.1\|558971_559217_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321024.1\|538844_539981_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|188425
NZ_AP021876.1\|WP_155321023.1\|537321_538650_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240665
NZ_AP021876.1\|WP_155308720.1\|534595_535420_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270347

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_155321029.1\|546980_547664_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|380065	pfam17939, TetR_C_30, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in the Pseudomonas aeruginosa PsrA which regulates the fadBA5 beta-oxidation operon. Functional analysis of PsrA indicated its importance in regulating b-oxidative enzymes. It has also been suggested that PsrA, a member of the TetR family of repressors, could affect global gene expression including activation of rpoS.	2.67233e-21
NZ_AP021876.1\|WP_155321025.1\|539999_540938_+\|hypothetical-protein	gnl\|CDD\|376493	pfam01208, URO-D, Uroporphyrinogen decarboxylase (URO-D).	8.59459e-13
NZ_AP021876.1\|WP_155308731.1\|549582_550017_+\|iron-sulfur-cluster-assembly-scaffold-protein	gnl\|CDD\|143480	cd06664, IscU_like, Iron-sulfur cluster scaffold-like proteins. IscU_like and NifU_like proteins. IscU and NifU function as a scaffold for the assembly of [2Fe-2S] clusters before they are transferred to apo target proteins. They are highly conserved and play vital roles in the ISC and NIF systems of Fe-S protein maturation. NIF genes participate in nitrogen fixation in several isolated bacterial species. The NifU domain, however, is also found in bacteria that do not fix nitrogen, so it may have wider significance in the cell. Human IscU interacts with frataxin, the Friedreich ataxia gene product, and incorrectly spliced IscU has been shown to disrupt iron homeostasis in skeletal muscle and cause myopathy.	9.30383e-26
NZ_AP021876.1\|WP_155308722.1\|536606_537338_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.66342e-155
NZ_AP021876.1\|WP_155308735.1\|555955_556159_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.43187e-11
NZ_AP021876.1\|WP_155321035.1\|562173_563949_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_AP021876.1\|WP_155321022.1\|535599_536610_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.41162e-82
NZ_AP021876.1\|WP_155321026.1\|541073_542285_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	6.86301e-115
NZ_AP021876.1\|WP_155321030.1\|550278_551529_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_AP021876.1\|WP_155321032.1\|554375_555347_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.71821e-40
NZ_AP021876.1\|WP_155320792.1\|559230_561393_+\|IS701-family-transposase	gnl\|CDD\|372975	pfam14236, DUF4338, Domain of unknown function (DUF4338). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 206 and 475 amino acids in length.	7.84007e-62
NZ_AP021876.1\|WP_155321027.1\|542297_545468_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_AP021876.1\|WP_155321033.1\|556484_558737_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.09359e-50
NZ_AP021876.1\|WP_155321028.1\|545472_546882_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|182103	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein.	8.70431e-101
NZ_AP021876.1\|WP_155308738.1\|561514_562177_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.65055e-101
NZ_AP021876.1\|WP_155321024.1\|538844_539981_+\|radical-SAM-protein	gnl\|CDD\|188425	TIGR03910, biotin_synthase, pyrrolysine biosynthesis radical SAM protein. This model describes a radical SAM protein, PylB, that is part of the three-gene cassette sufficient for the biosynthesis of pyrrolysine (the twenty-second amino acid) when expressed heterologously in E. coli. The pyrrolysine next is ligated to its own tRNA and incorporated at special UAG codons. [Amino acid biosynthesis, Other].	1.34282e-112
NZ_AP021876.1\|WP_155321023.1\|537321_538650_-\|hypothetical-protein	gnl\|CDD\|240665	cd12189, LKR_SDH_like, bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme. Bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Along with formate dehydrogenase and similar enzymes, SDH consists paired domains resembling Rossmann folds in which the NAD-binding domain is inserted within the linear sequence of the catalytic domain. In this bifunctional enzyme, the LKR domain is N-terminal of the SDH domain. These proteins have a close match to the active site motif of SDHs, and an NAD-binding site motif that is a partial match to that found in SDH and other FDH-related proteins.	0
NZ_AP021876.1\|WP_155308720.1\|534595_535420_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270347	cd13629, PBP2_Dsm1740, Amino acid-binding domain of the type 2 periplasmic binding fold superfamily. This subfamily includes the periplasmic binding protein type II (BPBII). This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBPII proteins share the same architecture as periplasmic binding proteins type I (PBPI), but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBPII proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	1.97662e-118

>NZ_AP021876.1|WP_155321029.1|546980_547664_+|TetR-family-transcriptional-regulator
MTDSHASKPSDTKTRILDVAEALFASNGFRQTSISRLARAAGVNLAAVNYHFGSKDALIRQVIERRLLPVHRLRVQRLEAIRETCTAQGRRPDVAELLRAFVEPSFSLTRGGDGGQRFLLIIGRVMAESDESIRNIFIRSFKPSFMLFFSLMRKSLPGLPKNELFWRLHFVASALGHAMRVHGAAMPSSELFPPKSDVDTVVRILMAFLTAGLKAPSHRESTACPPE
>NZ_AP021876.1|WP_155321028.1|545472_546882_+|efflux-transporter-outer-membrane-subunit
MNRILLILLCSLTLFSGCAVIPPYTPPETLVPDAWPTGPAYRDGSLTDEPVAADLPWPEFYTDARLRAVIETALANNRDLRLAALNVARAQAIYGIQRSALYPALDATANGSKKRIPADISSSGESYTAKQYDVNLGILSWEIDFFGRIRSLKEQALQSYLATEEARRSARILLIASVARAYLTLAADQENLRLAQTTFENQKSAHDLIKRRQEVGLGSELDLNRARTQVDIARVDIARYTRLVAQDRNALNLLAGTLQPLTEAHLPADLASVAPLGGIGAGLSSMVLLNRPDILQAERMLKAANANIGAARAALFPRISLTTTIGTASADLHNLFTAGQDTWLFAPQVSMPIFDARLWAALDATKAEREIAITQYQKAIQTAFREVADALAVEGTVDQQLSAQKALVRSAAETYRLSDARYTKGIDSYLGVLDAQRSLYTAQQALVAMNLVKLTNQVQLYAALGGGAR
>NZ_AP021876.1|WP_155321027.1|542297_545468_+|efflux-RND-transporter-permease-subunit
MLSKFFLARPVFAWVIAIVMMVAGGLAIYNLPISQYPPIAPPSIAIESFYAGASAETVENSVTQIIEQKMTGFDDMLYLSATSDSSGASRIELTFTPGTDPDLAWAKVQNKLQLAMASLPEAVQSQGVTVSKSTRNYLLIVGLVSEDGSMDGNDLRDYAQSNLEKVLARVPGVGEVTTFGSQYAMRIWLDPDRLTDYRLTIQDVITALRAYNVEISAGQFGGAPAVEGQRLNASIIVQNLLKTPDEFAAIPLRINPDGSVIRVRDVGRTELGTEQYDVQAHHNGQPAGGLAIRQSAGANALATARAIREKLDEMSRYFPEGMKVVYPYDTTPFVAVAIKEVFKTLFEAIILVFLVMYLFMGNIRATLIPTIAVPVVILGTFAVLGLFGFSINMLTMFAMVLAIGLLVDDAIVVVENVERIMSDEGLSPLDATAKSMDQITSALIGIGLVLSAVFGPMAFFPGSTGVIYRQFSITIIASMLLSVLVALILTPVLCASLLKPVPAGHEPADHAIFFMRPFFRWFDRFFFRSRTLYLKLVEHSLRRRLRYVFVFLLIVVAMVVLFRQMPTAYLPEEDQGILFVQAMLPANSTLEQTKAVLERVKTHFLEEQSEAVESLMTVSGYSFSGRGQNVGMAFVRLRDWELRNRPDLKVNAVAGKAMGTFSQIKNAMVFAFPPPAVIELGQANGFDFQLLDRGGAGHASLVAARNQLLGIAGQDTRLTRVRPNGLEDVPQYRIDVDWEKAGALGVPIAQIHRTISAAFGSAYVNDFIQAGRVKRVYIQADAPFRRLPGDLEKLYVRNMSGKMVPFASFASGHWTSGSPKLERFNGFPSINIWGEPVHGKSSGEAMQAMEEAVAQLPRAFGYDWTGLSYQERMAGSQAPILYAFSILVVFLCLAALYESWPIPISILMTLPLGVIGGVLASTMMDLPNDVYFQIGLLTILGLTTKNAILIVQFARARVDEGMRLIDATLEGAKLRLRPIVMTSLAFGFGVLPLALASGAGAGAQQAIGIGVLGGVVTSTFLVTLFAPLFYVIIYKLLGRHRKRERVQPAAVSPAEK
>NZ_AP021876.1|WP_155321026.1|541073_542285_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MQPFLVTMRTTLLAVVSGLLLAGCQEQKQSPGGAAPPPPPQISVIAVQPQRVLLTTQLPGRSSAYRVAEIRPQVNGLIQKRMFVEGANVKAGDVLYQIDPASFQAALNNAEAALGRSEANLPAARSRAERYRELLVEKAVSQQDYDDAAAALKKAEADVQYWNAALETARINLAYTRITAPISGRIGRSSVTEGAIVTAYQPVALAIIQQLDPIYVDVPLSTTDLMRMKRSLKNGQLRGTGKTMEAVTLILDNGSSYAHEGTLQFRDVTVDPTTGSVIQRVVFPNPNGLLLPGMFVRAVMREGVAEKAILIPQQSISRDPKGHPVALVAGAGDTVERRMLTLDRAIDDQWLVSDGLAAGDRLIVEGIQKVRPGTVVAAVPYDDGGETKGTTPAAATEAAGPTN
>NZ_AP021876.1|WP_155321025.1|539999_540938_+|hypothetical-protein
MDAAQRVMQVIRRRRGAGIPTGELTMERAFMESLLAWNGDFPAPATLSETRLIIECARLLSHDVICLQSQPPGGGDGDGDPAARAGEIARVADENFFVFWIVNGAFQQVMYSSDFVTFMTAIAVSPDAIAGEMAAVSKQVIATIELGARHGAHGIILADDIAYQKSTYMSPAFGERYLLPLWKQQVAAAKAVGMPVFFHSDGNLNHFLPFIVAAGFDGLQCIESSAGMDIFKIGQTYGDRLCLMGNIDSALLCPTASPDVENGEPLALDRAVNDLNAAFGRSGGLILGTSGGLHSGMSFDLVMRMAALVPNV
>NZ_AP021876.1|WP_155321024.1|538844_539981_+|radical-SAM-protein
MKRDLWAGVQSGSGLRQGREALYAMLDQAAVTAGIPPSAMIRLLDSPTPELLNRLFTAARSQRERHFGTRVYLYGTLNISTHCRQRCSFCYFRKTNRLARRYRQPLPQVVDQARCLAASGVHLINLTGGEDPFFFDDGLHGFDPLVEMVRAVSTDTGLPVMISMGVLPGAVMPRLHAAGAVWYACYQETYNRQRFGQLRVGQDFDQCYQSKMTARQNGLLVEDGVLCGTGETSRDLLDAFTAMARLGASQVRATTFVPLVGTPMHDEAPSSSLRTSIAIALLRITYPDLLIPAPLDWGGMADLREHLNAGANVVAGLVTPGSDAGELPMARSEQRTMEGIACTLRGCGLAPASADTYRDRVLRHSPIETRKASGEVFS
>NZ_AP021876.1|WP_155321023.1|537321_538650_-|hypothetical-protein
MKTLLIRAEDKNRWERRAPLVPDDLAKIVTATGVKALVEQSEKRFFSREQYTAAGAEPCQGMGKGEVVLGVKEIPIEKILDRKTYVFFSHTIKGQKANMPLLRRIIDGSCTLIDYEKITDADDRRLIYFGPYAGDAGAIDILSLMGEHWAAKGIDTPFAAFRRAHQYDSVADARAHLTEIGRQIGKDGLPEAICPFSVGILGYGNVSKGAQQIFDCLPTERVEPDAVGAQLRPDRANRHTVYITIFKESDLVQPKAHGAGFDLAEYYHHPERYESRFEPYLPFFTLLVNAVYWESRYPRFVTWAGLKRLAGTRTPPKLCGIADITCDTNGSIECNVKSTDSDMPAYLVDPLTGTTRDGHLGDGIVLLAVDNLPCELPNDSSTFFSNQLRPFIPGLLGADFSKPLEESGLPEALQKAVIVYNGRLTPRFAYLQEHLSSSIISD
>NZ_AP021876.1|WP_155308722.1|536606_537338_+|ATP-binding-cassette-domain-containing-protein
MIQAKNVFKTFYAPHAINALVDVSANIAAGEVVVVIGPSGSGKSTFLRCLNRLEHATSGHIYIDGLDVLDRRTDINKVRAEVGMVFQSFNLFPHKTVLENVTLAQKVVRKRSGNAARQKAMTLLEKVGISDKINVFPDQLSGGQQQRVAIARALAMEPKVMLFDEPTSALDPEMIGEVLDVMKTLAREGMTMVVVTHEMGFAREVADRVIFMDAGAIVEEGTPEHFFTNPTHDRTKLFLSQIL
>NZ_AP021876.1|WP_155321022.1|535599_536610_+|ABC-transporter-permease-subunit
MNETTQQRITAKPANYNRWVVIFCLGVLVFLGLFYYATQKIQYVWRWNRTPIYFAYQDDIDITSTIDGEVSAIAIDGSKARITVLGIGEEETYVVPAKGLRVDQGDFISPGDTLASYKKWKPGLLVVGLWITLKISVLATIVGVIIGIISGLMRISDNPALRWTSIVYVELIRGSPLMVQILVWYFVLGTLINDLLSANGWGQIPALWYGVASLACFAGAYVSEIVRGGIQSIHRGQTEAARSLGMNYAQSMRYIILPQALRRILPPLAGQFISLIKDSSLLGIIAIRELTKAAREAVTATLQPFEVYILLGLLYLVLTFSLSMYVQYLERRMATS
>NZ_AP021876.1|WP_155308720.1|534595_535420_+|transporter-substrate-binding-domain-containing-protein
MKRGLFTPLAILAALAFCLGPAFGADIELAKKSHIQKILSRGELRVGFESGYMPFEMTNKKGDFIGFDIDFAKRMAKAMGVKFVPVNTSYDGIIPALVTDKFDIIMSGMTITQERNLKVTFADPYIVVGQTILLNNKHAGTVKSYKDLNDPKYTLTSRMGTTGEQSIKRMIPKATYKGFESEAEAGLEVINGKADALVYDLPFIGILYASQGQGRTVFLDKPFTYEPLAWAINPGDPDFLNFLNNFLSQSKGDGFYEKVYNKWILSSDWKKELQ
>NZ_AP021876.1|WP_155308731.1|549582_550017_+|iron-sulfur-cluster-assembly-scaffold-protein
MTQIQSAVPDNTQGVREMLRASGYSEKAIDYYINKPHMGQVSDADISSEMTGSCGDTMGITIKMENGLVSDAKYQVMGCAGAVSAAMAVVDLIKGKDLDYARSINDGAVFKVLQEIPVKKHHCIQLAVKTLHKAIDLQQMKQSA
>NZ_AP021876.1|WP_155321030.1|550278_551529_+|acetyl-CoA-C-acyltransferase
MKDVVIVSACRTAIGAFGGTLKSLNGATLASIVMKAAIQRAGIDPAMIDDVRFGCCLEHHDSLNTTRVAALLAGIPDSVTAVTINRVCISGMEAVISGTAMIQAEMADVILAGGVEHMSGIPFVVPSARWGARLQDQVFVDAMIHALHCGSYIMPLDENAPMDTSKAPASHFLGKPYIMGHTAEFIAQKLGITRQEMDEVALRSQNSAERANNDGSFAEEIVPVPVPRRKQDPLMFDRDEHFRPGLTMEELQKLPPAFVPKTGTVTAGNASGINDGAAAMLIMSAEKAAALGLKPMARIRAMGRGACHPALMGLSPVPAVKDLMQRSGLKLADFELVELNEAFAAQYIGCERELGLNREITNVNGSGIGLGHPVGATGCRIMVTLLHAMQKRGNQLGLATLCGGGGVSMACALEMI
>NZ_AP021876.1|WP_155321031.1|551572_553699_-|hypothetical-protein
MKQLKSKKSVTRNGLFRVVGTIKTADQTALPAGVELSAYAFDIRGQLLGHGPIDAKGSYDITLNLSSPADVQVVVGPTADPQAARRSGGAALKFSARQWEEKDKGFYLQADLTLTPGILQTLFPWRICISGHVRKRLSEESDSACPVPFVKVEIFDVDREWCLWPLIKKWWWHLLDRRVFEIPELLRDPPFPLDPFPGPDPVGPVFEKETVAVARQTVAGMSPIPEPPQTVAMLGPQPEPPDQPQLAKTLTVAQAAFERVGEFRMLDATLASRLDNLTLTAKLPPWVLLPHCFYSRELICDTMTDETGYFRCCFDWWPMHFRRGRLRFDRRPDIIFKITQVIDGVETILYLDPYSSTRWNTTTAHVDLWIDDEEVECGSGESQERPEGAQAFITRIGDTEVYKINQTDGLFAQAPISNLAFGGSLLIYGQFGEDISDGSPIRYYRLSQAKHGSPDEDFVPLTTPLSDTRVNKVTNVSESHALGPMPVNGEPALFEVRNFDDYLWYHPDRLGTWYSWRTEPDTGKYVLRLEVFDENGVKLDSTDIDYRDGTVPPGSVLPAMLNRCDVVVTLDNLAPTVDFDIPAVINSCGVIPWEAVPPLDIDIRVVQENGRLRRWGLQYTKGTVATVHGLDSGVSNNGTPASVTQTVPGAPMLTGLTSTCAFALKLWARSHITDGRITGTSGLPRTIYYRETIKAIVIEKCDPCPPCE
>NZ_AP021876.1|WP_155321032.1|554375_555347_+|WYL-domain-containing-protein
MGTIATLERIFWFDDQARRKRYPNARALAERFELSSKTAQRCIDAMRDRFGAPLEYHPSKRGYYYLDDSLELPHFQIGQEEILSLLLARRLLSSTSGGFISRDIERFSRKLITEAGGLGLAPGDIDRIFSATWTGHAPVSAATFQLISHSLIASRRLRFAYRSPVADQPITRTVEPHHLQYYMASWVLTARCLLRGGWRKFYLSRMDALHLTDETFTPRPADQWRHCMEGAFGIFQGEKTIDVVLHFSPFRAGWIREQCWHPAQQMVPLDDGGLELRLPVADFREIKMKILQFGADVVVVAPEALRSEIVDEIGRLGKIYGEA
>NZ_AP021876.1|WP_155308735.1|555955_556159_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MQTKYKVVLNKTDEGYSVHCPGLPGCWSQGETEAEAIENIKDAVTEYLAALYESIKNADIREIDVAI
>NZ_AP021876.1|WP_155321033.1|556484_558737_+|CRISPR-associated-helicase-Cas3'
MKKSKPKYYAHSLEDKPPEEWQLLEDHLRNVARLAGEFASSFGSDCWAELAGLWHDIGKYSREFQKKLYDANGIECYLETKPGKVIHSQAGGHLAQQCMSNGMERIFCWLIMGHHAGLADFSSDKTGAKALEPKMRNPERSESILENVPDKIKNKLSPDFPQLLKDGADISFFIRILFSCVVDADFLDTEAFMNSEKAALRAEVYPALDDLLIALDKHLDDLCQSAEPTDVNRIRAEVLEQCRQSADLNPAVFTLTVPTGGGKTLSSLAFALRHAKKQSKGRIIYVIPYTSIIEQTAQVFRKIPGFENAVLEHHCNVVSNDESKESIRSRLASENWDAPIIVTTAVQFFESLFACKTSRCRKLHNITHSVIIFDEAQCLPPSYLRPVVFAIRELYRHYGVTPVLCTATQPVLTQTKQFDFKFKEGFDPAEVVPIISNPETLTDNLKRVELTNHADLRPVSYDELVGAIQAENQSVLCIVNKKDDCRTLAKLLPEEYTLHLSTNMCAAHRLQTIENIRKRLKTEAKPLYVVSTSLVEAGVDLDFPVVYRALSGLDSIAQAAGRCNREGRLPNYGKTVIFLPEKQPGYVQAPASLALEYLLKPDQLKTIFLPKTIESYFKQRFFQLGDHALDEKQILRLLGGNLDFYFRTVAERFRLIDDDWQLPVIAPYEEAIFFVDELKRAPHLNRKIIRKLQRYLVNISCKERILLEREGALELISLPEIFQLNAHFYDLKYGVIAEGSININPEELIC
>NZ_AP021876.1|WP_155321034.1|558971_559217_+|hypothetical-protein
MSNNFRMFFKLQELSINLIQAQKTKTIVTHDATNTEIFNESITLELKKFRFEQLISNQHSRQAQLKQITHITLQRKIAVDN
>NZ_AP021876.1|WP_155320792.1|559230_561393_+|IS701-family-transposase
MLPINRAINRSYGVAHCSFVGLKAVLSAAVESRFTVNNTIAAMQIAQKQNDILPPVPPTFNTDAIAGTIKDFGPAKVVPVSGSDWEPLWDRWVRQHHYLGYRRLLGHRLKYLAFLKDRPVAGLSWSAPALKLSARDRFIGWSPEQRKQHLHQLAANSRFLILPWVQLHNLASHVLALNIARLPADWLRHFSHRLLLLETFVDNRYFAGTCYKAANWQHIGPTQGSTKQGKGYRYHGNPKEVYLYVLDPNFRQIIDCRQQPALSCDRPSTQTKVEALVMLLEHCRWHPQLTADLNLDPFDLETIAKELVDFHQCFHDAYGRSEHHRLGLAYFSGLMSNAEAKSVEPIALEFLDQKSVRSLQMFMKNGRWDHDTMLRVHQEMLAPLIAAPDGMITVDPSDFPKKGKESVGVARQYCGPLGKTENCQSGVFIGYSSDKGYGLLNCQLYMPESWFSPEQEKRRRFNMVPEDLVFETKQQIALRLINEIVAAKYYPAKWVGADAAFGSDIEFLNALPKDLLYFAAIKSNTQVFTKKPKVGIPPYKGHGRHPTKEKVLPGQPKPRTVSEIAKSGRLSWKTVVVAEGAKGPIIAKVARIRVYMSRDGLPVGDQQWLFFRQNDDGKIRYAISNAPKKISRSEMVKASTMRWPIEQCFQEGKSQVGMDCYEHRSWPAWHRHMTFVFLALHFMLRMRLRFKKNSVVDGSLGSQNTICSTSSQVAEFRGDV
>NZ_AP021876.1|WP_155308738.1|561514_562177_+|type-I-C-CRISPR-associated-protein-Cas5
MNKSSPFRLKVSGPNACFTRPEMKVERVSYDVMTPSAARGILEAILWKPAIFWKILQIDVMNPIKWESVRRNEVGAVVSARNAKTAMREGSGFLGLYIEKERQQRAGLFLRDVAYVIHAEFELTARAGPEDNVVKFEQMFIRRASQGQCFHRPYFGCREFPVDFEFIPKDASDLPAIAKTHDFGWMLHDIDYSGKEPMPQFFNAKMVNGKIDLRNVEVRS
>NZ_AP021876.1|WP_155321035.1|562173_563949_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILNALSAYYQRLADDPGVDVAPLGFEHKAIDFLIKLDDAGKFVNFHDLREGTGKKRKGRLSLVPKGIKRSSGIAANLLWDTVPYVLGRALPEKGKNIEKSSARAVEQHKAFVEKVEQTLSGCSDRGAMAVLSFLRCGEFNPIFEHTLWDEVEQSGGNITFSLAGDTQLVCQRPEVVAAISEKLKPEGELQACSVSGKKNVPAILHTAIKGVWGAQSSGANIVSFNLDAFRSFGKKQGFNAPVGSSIEFAYTTALNYLLASANQRMQVGDASTVFWARDPCDFEKDLHPILAPKKGEEAVSYNKIRGLLSAVKTGLPLGEEDLPFYVLGLAPNASRIAVRFWCEGNVKKIKERVAEHFLDIEMVRAPHDPEFLSLFQLLVSTATERKADNIPPNLGGEVARSVFTGTAYPRTLFANAIRRCKAEQKVTFARASIIKGVLTRMSRTSNLKDKEVSVALDKSYDNIGYVLGRLFAVLEWIQELAHTPEGKKRQNLNKTIRDTYFGAATSSPLITFKRLDELSVHHLAKIRNSGKGIVWLEQLKQEVFGHIPAKGIPSILDLEDQGRFSVGYYHQRQDFFTSKKTEEIKENTNG

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Crispr_ID: NZ_AP021876_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_4

568020-570436

TypeI

I-C

Consensus_repeat	Method
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	PILER-CR
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CRT

36 spacers

cas2,cas1,cas4,cas7,cas8c,cas5

The CRISPR arrays of NZ_AP021876_4

>merge|NZ_AP021876|4|568020-570436|PILER-CR,CRISPRCasFinder,CRT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAACATATAGTCAATGGATGCGCCTTCAACGTTTTGCGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCGATGTCCCACTCGAATGGCTATGGCTGCCCGTGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATCAAAAGAGTTCAACCGAAAGCTGAACGCAACCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTTAAAATAGTATCGTTGACATTCGGATAGCACTTGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTGGTCGTCATGGTCAACGACAAGGGTTTTCCCGCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTGAGGTACTATAAAATAAGGAGATCTTAGCATGGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATACCAGTCCATACGGATATTTTCTGCCCAATCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCTCACAGGCGGCATGGGAAGATTACGAAAAAACTGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCACTCTTAGTGGGCATCAATATTCATTTTACAGTGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTTGGTGATAGTTCAGGGGCTGTTCCGCTTCTATTCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATTCTTGGCCTGTTGGCGCTGATGGGATTTTTTAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCCTCCAAGTATCTAAAAATGCGCGGTCATCCTCAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACGAGTCGGTATGAAGCGCCATACCACTGCGGTGCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACAGACCTTATTTCATGGACGAAGCAGGCGGTTGATGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTTTTCTTTCACGACACACCCCTTTTTCAGTTTTGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACAGTTGCAATTGATGAACTTGATATGGTCTGTTGTCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATCAGAAAGTAAAGTGATTTCTTATGATTTATTAGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTTACTCTGAGGGTTGGGCGGAGGAAATAATCGACGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCTTTTTGCCCACGACTTATCTCCTTCACGCTTTGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATGAACTTTCAGGTGGGGAAAGGAAAACGAAGAAGGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCATCCACAATATTCCACATCTCCGCCAATATACGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTCTTATCCGCATCCAATCGTTGAAGAAATAACTAAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACAACTCCCAAACTGAATTGACATCAAGTAATCCGGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACGGATCCACATAGGCCAGGGCGTACAATGACCCAGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCGTATAGACATCGATGCCATCATCATCCATGACCGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATGTTTGCGCTCTGGCAGACGGTCTGCTTTTAAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACAATTCGGTCTATAATGGGGATTACGGCATCCATCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTGGTGACGATGAGATATCGATCGCGTTTACGTAAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTTTTCTGATCTGCCGACCGATAACGAAAAAAGAGCGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCATTGTACCCGCCAGCGCTTTGACTACCCCAAAAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACGGTTGGCTACCTTCTCTTCTATCAACCGTCTCAAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACATATTCACAACGGAAAAAAGCGCCGGATTTTCGAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACGGCACCCGTTGGAGTCTTATAGAATCCCATTTTGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTAATACTCTTTCTATTAGTGACACACAGGATGTTAGGTCGCTCCCTTCACGGGAGCGTGGATTGAAACTTATCAGGCCACCGTTTCGGATGGAACCGAAAAGCAGTCGCTCCCTTCACGGGAGCGTGGATTGAAACCTTCAGGTGATGGCAGAACGTGGCATTGCCGATGAGGTCGCTCCCTTCACGGGAGCGTGGATTGAAAC

>NZ_AP021876|4|4|568020-570436|PILER-CR
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATATAGTCAATGGATGCGCCTTCAACGTTTTGCG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CGATGTCCCACTCGAATGGCTATGGCTGCCCGT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATCAAAAGAGTTCAACCGAAAGCTGAACGCAACC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTAAAATAGTATCGTTGACATTCGGATAGCACTT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGGTCGTCATGGTCAACGACAAGGGTTTTCCCGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGAGGTACTATAAAATAAGGAGATCTTAGCATGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATACCAGTCCATACGGATATTTTCTGCCCAATC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTCACAGGCGGCATGGGAAGATTACGAAAAAACT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CACTCTTAGTGGGCATCAATATTCATTTTACAGT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTGGTGATAGTTCAGGGGCTGTTCCGCTTCTATTC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATTCTTGGCCTGTTGGCGCTGATGGGATTTTTTA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CCTCCAAGTATCTAAAAATGCGCGGTCATCCTCA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GAGTCGGTATGAAGCGCCATACCACTGCGGTGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AGACCTTATTTCATGGACGAAGCAGGCGGTTGAT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTTTCTTTCACGACACACCCCTTTTTCAGTTTTG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AGTTGCAATTGATGAACTTGATATGGTCTGTTGTC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATCAGAAAGTAAAGTGATTTCTTATGATTTATTAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTACTCTGAGGGTTGGGCGGAGGAAATAATCGAC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTTTTTGCCCACGACTTATCTCCTTCACGCTTTG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATGAACTTTCAGGTGGGGAAAGGAAAACGAAGAAGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CATCCACAATATTCCACATCTCCGCCAATATACG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TCTTATCCGCATCCAATCGTTGAAGAAATAACTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AACTCCCAAACTGAATTGACATCAAGTAATCCGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGATCCACATAGGCCAGGGCGTACAATGACCCAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CGTATAGACATCGATGCCATCATCATCCATGACCG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATGTTTGCGCTCTGGCAGACGGTCTGCTTTTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AATTCGGTCTATAATGGGGATTACGGCATCCATC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGGTGACGATGAGATATCGATCGCGTTTACGTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTTTCTGATCTGCCGACCGATAACGAAAAAAGAGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CATTGTACCCGCCAGCGCTTTGACTACCCCAAAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGTTGGCTACCTTCTCTTCTATCAACCGTCTCAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATATTCACAACGGAAAAAAGCGCCGGATTTTCGA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGCACCCGTTGGAGTCTTATAGAATCCCATTTT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TAATACTCTTTCTATTAGTGACACACAGGATGTTAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTATCAGGCCACCGTTTCGGATGGAACCGAAAAGCA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTTCAGGTGATGGCAGAACGTGGCATTGCCGATGAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC

>NZ_AP021876|4|4|568020-570436|CRISPRCasFinder
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATATAGTCAATGGATGCGCCTTCAACGTTTTGCG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CGATGTCCCACTCGAATGGCTATGGCTGCCCGT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATCAAAAGAGTTCAACCGAAAGCTGAACGCAACC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTAAAATAGTATCGTTGACATTCGGATAGCACTT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGGTCGTCATGGTCAACGACAAGGGTTTTCCCGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGAGGTACTATAAAATAAGGAGATCTTAGCATGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATACCAGTCCATACGGATATTTTCTGCCCAATC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTCACAGGCGGCATGGGAAGATTACGAAAAAACT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CACTCTTAGTGGGCATCAATATTCATTTTACAGT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTGGTGATAGTTCAGGGGCTGTTCCGCTTCTATTC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATTCTTGGCCTGTTGGCGCTGATGGGATTTTTTA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CCTCCAAGTATCTAAAAATGCGCGGTCATCCTCA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GAGTCGGTATGAAGCGCCATACCACTGCGGTGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AGACCTTATTTCATGGACGAAGCAGGCGGTTGAT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTTTCTTTCACGACACACCCCTTTTTCAGTTTTG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AGTTGCAATTGATGAACTTGATATGGTCTGTTGTC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATCAGAAAGTAAAGTGATTTCTTATGATTTATTAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTACTCTGAGGGTTGGGCGGAGGAAATAATCGAC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTTTTTGCCCACGACTTATCTCCTTCACGCTTTG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATGAACTTTCAGGTGGGGAAAGGAAAACGAAGAAGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CATCCACAATATTCCACATCTCCGCCAATATACG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TCTTATCCGCATCCAATCGTTGAAGAAATAACTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AACTCCCAAACTGAATTGACATCAAGTAATCCGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGATCCACATAGGCCAGGGCGTACAATGACCCAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CGTATAGACATCGATGCCATCATCATCCATGACCG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATGTTTGCGCTCTGGCAGACGGTCTGCTTTTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AATTCGGTCTATAATGGGGATTACGGCATCCATC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGGTGACGATGAGATATCGATCGCGTTTACGTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTTTCTGATCTGCCGACCGATAACGAAAAAAGAGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CATTGTACCCGCCAGCGCTTTGACTACCCCAAAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGTTGGCTACCTTCTCTTCTATCAACCGTCTCAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATATTCACAACGGAAAAAAGCGCCGGATTTTCGA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGCACCCGTTGGAGTCTTATAGAATCCCATTTT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TAATACTCTTTCTATTAGTGACACACAGGATGTTAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTATCAGGCCACCGTTTCGGATGGAACCGAAAAGCA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTTCAGGTGATGGCAGAACGTGGCATTGCCGATGAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC

>NZ_AP021876|4|3|568020-570436|CRT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATATAGTCAATGGATGCGCCTTCAACGTTTTGCG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CGATGTCCCACTCGAATGGCTATGGCTGCCCGT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATCAAAAGAGTTCAACCGAAAGCTGAACGCAACC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTAAAATAGTATCGTTGACATTCGGATAGCACTT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGGTCGTCATGGTCAACGACAAGGGTTTTCCCGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGAGGTACTATAAAATAAGGAGATCTTAGCATGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATACCAGTCCATACGGATATTTTCTGCCCAATC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTCACAGGCGGCATGGGAAGATTACGAAAAAACT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CACTCTTAGTGGGCATCAATATTCATTTTACAGT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTGGTGATAGTTCAGGGGCTGTTCCGCTTCTATTC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATTCTTGGCCTGTTGGCGCTGATGGGATTTTTTA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CCTCCAAGTATCTAAAAATGCGCGGTCATCCTCA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GAGTCGGTATGAAGCGCCATACCACTGCGGTGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AGACCTTATTTCATGGACGAAGCAGGCGGTTGAT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTTTCTTTCACGACACACCCCTTTTTCAGTTTTG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AGTTGCAATTGATGAACTTGATATGGTCTGTTGTC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATCAGAAAGTAAAGTGATTTCTTATGATTTATTAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTACTCTGAGGGTTGGGCGGAGGAAATAATCGAC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTTTTTGCCCACGACTTATCTCCTTCACGCTTTG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATGAACTTTCAGGTGGGGAAAGGAAAACGAAGAAGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CATCCACAATATTCCACATCTCCGCCAATATACG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TCTTATCCGCATCCAATCGTTGAAGAAATAACTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AACTCCCAAACTGAATTGACATCAAGTAATCCGG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGATCCACATAGGCCAGGGCGTACAATGACCCAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CGTATAGACATCGATGCCATCATCATCCATGACCG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATGTTTGCGCTCTGGCAGACGGTCTGCTTTTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	AATTCGGTCTATAATGGGGATTACGGCATCCATC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TGGTGACGATGAGATATCGATCGCGTTTACGTAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTTTCTGATCTGCCGACCGATAACGAAAAAAGAGC
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CATTGTACCCGCCAGCGCTTTGACTACCCCAAAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGTTGGCTACCTTCTCTTCTATCAACCGTCTCAA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	ATATTCACAACGGAAAAAAGCGCCGGATTTTCGA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	GGCACCCGTTGGAGTCTTATAGAATCCCATTTT
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TAATACTCTTTCTATTAGTGACACACAGGATGTTAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	TTATCAGGCCACCGTTTCGGATGGAACCGAAAAGCA
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC	CTTCAGGTGATGGCAGAACGTGGCATTGCCGATGAG
GTCGCTCCCTTCACGGGAGCGTGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_155321035.1\|562173_563949_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_AP021876.1\|WP_155321036.1\|563941_564802_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_AP021876.1\|WP_155320792.1\|559230_561393_+\|IS701-family-transposase	unknown	unknown	gnl\|CDD\|372975
NZ_AP021876.1\|WP_155321041.1\|571743_572895_+\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181526
NZ_AP021876.1\|WP_155321046.1\|579441_581889_+\|hydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|224070
NZ_AP021876.1\|WP_155321042.1\|572894_573743_+\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|237006
NZ_AP021876.1\|WP_173179021.1\|581984_582344_-\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_AP021876.1\|WP_155321039.1\|570633_570888_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|226603
NZ_AP021876.1\|WP_155321038.1\|566484_567516_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_AP021876.1\|WP_155308745.1\|567521_567812_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP021876.1\|WP_155321037.1\|565843_566488_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_AP021876.1\|WP_155321040.1\|571457_571724_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|236597
NZ_AP021876.1\|WP_155308755.1\|582340_582625_-\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259857
NZ_AP021876.1\|WP_155308741.1\|565216_565561_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_AP021876.1\|WP_155321043.1\|573798_574374_+\|2-oxoacid:acceptor-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|181462
NZ_AP021876.1\|WP_155321034.1\|558971_559217_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321045.1\|577812_579402_+\|hydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|223325
NZ_AP021876.1\|WP_155321044.1\|574370_577727_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|237198
NZ_AP021876.1\|WP_155308742.1\|565538_565793_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_AP021876.1\|WP_155308738.1\|561514_562177_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187534

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_155321035.1\|562173_563949_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_AP021876.1\|WP_155321036.1\|563941_564802_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	5.25661e-159
NZ_AP021876.1\|WP_155320792.1\|559230_561393_+\|IS701-family-transposase	gnl\|CDD\|372975	pfam14236, DUF4338, Domain of unknown function (DUF4338). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 206 and 475 amino acids in length.	7.84007e-62
NZ_AP021876.1\|WP_155321041.1\|571743_572895_+\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl\|CDD\|181526	PRK08659, PRK08659, 2-oxoacid:acceptor oxidoreductase subunit alpha.	0
NZ_AP021876.1\|WP_155321046.1\|579441_581889_+\|hydrogenase-iron-sulfur-subunit	gnl\|CDD\|224070	COG1148, HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion].	0
NZ_AP021876.1\|WP_155321042.1\|572894_573743_+\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl\|CDD\|237006	PRK11867, PRK11867, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed.	2.04936e-120
NZ_AP021876.1\|WP_173179021.1\|581984_582344_-\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	9.19263e-06
NZ_AP021876.1\|WP_155321039.1\|570633_570888_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	2.35922e-11
NZ_AP021876.1\|WP_155321038.1\|566484_567516_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_AP021876.1\|WP_155308745.1\|567521_567812_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.64219e-33
NZ_AP021876.1\|WP_155321037.1\|565843_566488_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.79013e-37
NZ_AP021876.1\|WP_155321040.1\|571457_571724_+\|4Fe-4S-binding-protein	gnl\|CDD\|236597	PRK09626, oorD, 2-oxoglutarate-acceptor oxidoreductase subunit OorD; Reviewed.	1.61336e-11
NZ_AP021876.1\|WP_155308755.1\|582340_582625_-\|HU-family-DNA-binding-protein	gnl\|CDD\|259857	cd13835, IHF_A, Alpha subunit of integration host factor (IHFA). This subfamily consists of the alpha subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	1.5637e-42
NZ_AP021876.1\|WP_155308741.1\|565216_565561_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.37462e-12
NZ_AP021876.1\|WP_155321043.1\|573798_574374_+\|2-oxoacid:acceptor-oxidoreductase-family-protein	gnl\|CDD\|181462	PRK08537, PRK08537, 2-oxoacid:ferredoxin oxidoreductase subunit gamma.	1.30446e-67
NZ_AP021876.1\|WP_155321045.1\|577812_579402_+\|hydrogenase-iron-sulfur-subunit	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	3.88519e-55
NZ_AP021876.1\|WP_155321044.1\|574370_577727_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|237198	PRK12771, PRK12771, putative glutamate synthase (NADPH) small subunit; Provisional.	1.99216e-119
NZ_AP021876.1\|WP_155308742.1\|565538_565793_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	0.0038171
NZ_AP021876.1\|WP_155308738.1\|561514_562177_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.65055e-101

>NZ_AP021876.1|WP_155308745.1|567521_567812_+|CRISPR-associated-endonuclease-Cas2
MMVLVSYDVSTIDEEGPGRLRRVAKICKNYGQRVQYSVFECIVDPAQWTVLKQKLTDQIETGTDSLRFYFLGANWKNRIEHVGLEKSFDQEGPLIV
>NZ_AP021876.1|WP_155321038.1|566484_567516_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKHLNTLFVTTQGAYLNKEGETVVVSVDREKKLQLPIHTLDGIVCFGRVLCSPYLMGFCADRDVAISFLSEHGRFLARVQGPVSGNVLLRREQYRRADNMDASAQIAHGVLVGKLANSRTVLQRVVRDHGDKVDAAGINSAANHISALLKSTGSDVPLDSLRGMEGDAARVYFGAFDHLIVNKANGFSFNGRNRRPPLDPVNCLLSFVYTLLLHDVRSALESVGLDSAVGFLHRDRPGRPSLALDMMEEFRPVIADRLVLSLINRGQAAKKDFSTQETGAVTMSDELRKTVLVTYQKRKQDEIFHPFLEEKVTVGLLFSTQALLLARHLCGDLDAYPPFVWR
>NZ_AP021876.1|WP_155321037.1|565843_566488_+|CRISPR-associated-protein-Cas4
MFAELDLLALSALQHICFCERQCALIHIEQVWLENRFTAEGRIMHERVDTGKSEKRRDVRISSAVALRSLRLGLIGKADVVEFHRQQSPGGKTIWQPFPVEYKRGRPKKDNCDKIQLCAQALCLEEMLDCHIEHGALFYGKTRRRQDVAFDDTLRTETMQMAERLHALFDARKTPPPVFDKRCPNCSFISYCMPEKLDGKKRVSRYLESIREGK
>NZ_AP021876.1|WP_155308742.1|565538_565793_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRIIQWRNKALRQLRKIKSKAERVKITNAVRKLEGFPDCQDVKKLKNRDDYRLRVGRWRIIFTEQLEIILIEEIKKRNERTYTS
>NZ_AP021876.1|WP_155308741.1|565216_565561_-|helix-turn-helix-domain-containing-protein
MNAPTLHNVQVISRNGKPEYAVVPYMDYLRLLEKAEDSEAIIPHEVVELVIEKEFNLLKAWRKHLGLTQKEVARRADITQSALSQMERTASNNRTATLEKLAKALGIETNQLVD
>NZ_AP021876.1|WP_155321036.1|563941_564802_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MGEAIKNRYEFVLLFDVKDGNPNGDPDAGNLPRIDPETGNGLVTDVCLKRKVRNYVGLVKGEQPPYEIYVKEKAVLNRAHERAYKAYDLKPEAKKLPKKEEDAKRVTGWMCQNFFDIRTFGAVMSTEINAGQVRGPVQFGFGRSVDRIFTGEHTITRMAVTKEEDLEKERTMGRKFTIPYGLYKVHGFISAPLAKQTGFTEDDLELFWKALINMFDHDRSAARGEMAPQKLIVFKHESELGNAPAQKLFGLVNVEKNCGERPPRSFDDYTVSIDNAPEKVEILEML
>NZ_AP021876.1|WP_155321035.1|562173_563949_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILNALSAYYQRLADDPGVDVAPLGFEHKAIDFLIKLDDAGKFVNFHDLREGTGKKRKGRLSLVPKGIKRSSGIAANLLWDTVPYVLGRALPEKGKNIEKSSARAVEQHKAFVEKVEQTLSGCSDRGAMAVLSFLRCGEFNPIFEHTLWDEVEQSGGNITFSLAGDTQLVCQRPEVVAAISEKLKPEGELQACSVSGKKNVPAILHTAIKGVWGAQSSGANIVSFNLDAFRSFGKKQGFNAPVGSSIEFAYTTALNYLLASANQRMQVGDASTVFWARDPCDFEKDLHPILAPKKGEEAVSYNKIRGLLSAVKTGLPLGEEDLPFYVLGLAPNASRIAVRFWCEGNVKKIKERVAEHFLDIEMVRAPHDPEFLSLFQLLVSTATERKADNIPPNLGGEVARSVFTGTAYPRTLFANAIRRCKAEQKVTFARASIIKGVLTRMSRTSNLKDKEVSVALDKSYDNIGYVLGRLFAVLEWIQELAHTPEGKKRQNLNKTIRDTYFGAATSSPLITFKRLDELSVHHLAKIRNSGKGIVWLEQLKQEVFGHIPAKGIPSILDLEDQGRFSVGYYHQRQDFFTSKKTEEIKENTNG
>NZ_AP021876.1|WP_155308738.1|561514_562177_+|type-I-C-CRISPR-associated-protein-Cas5
MNKSSPFRLKVSGPNACFTRPEMKVERVSYDVMTPSAARGILEAILWKPAIFWKILQIDVMNPIKWESVRRNEVGAVVSARNAKTAMREGSGFLGLYIEKERQQRAGLFLRDVAYVIHAEFELTARAGPEDNVVKFEQMFIRRASQGQCFHRPYFGCREFPVDFEFIPKDASDLPAIAKTHDFGWMLHDIDYSGKEPMPQFFNAKMVNGKIDLRNVEVRS
>NZ_AP021876.1|WP_155320792.1|559230_561393_+|IS701-family-transposase
MLPINRAINRSYGVAHCSFVGLKAVLSAAVESRFTVNNTIAAMQIAQKQNDILPPVPPTFNTDAIAGTIKDFGPAKVVPVSGSDWEPLWDRWVRQHHYLGYRRLLGHRLKYLAFLKDRPVAGLSWSAPALKLSARDRFIGWSPEQRKQHLHQLAANSRFLILPWVQLHNLASHVLALNIARLPADWLRHFSHRLLLLETFVDNRYFAGTCYKAANWQHIGPTQGSTKQGKGYRYHGNPKEVYLYVLDPNFRQIIDCRQQPALSCDRPSTQTKVEALVMLLEHCRWHPQLTADLNLDPFDLETIAKELVDFHQCFHDAYGRSEHHRLGLAYFSGLMSNAEAKSVEPIALEFLDQKSVRSLQMFMKNGRWDHDTMLRVHQEMLAPLIAAPDGMITVDPSDFPKKGKESVGVARQYCGPLGKTENCQSGVFIGYSSDKGYGLLNCQLYMPESWFSPEQEKRRRFNMVPEDLVFETKQQIALRLINEIVAAKYYPAKWVGADAAFGSDIEFLNALPKDLLYFAAIKSNTQVFTKKPKVGIPPYKGHGRHPTKEKVLPGQPKPRTVSEIAKSGRLSWKTVVVAEGAKGPIIAKVARIRVYMSRDGLPVGDQQWLFFRQNDDGKIRYAISNAPKKISRSEMVKASTMRWPIEQCFQEGKSQVGMDCYEHRSWPAWHRHMTFVFLALHFMLRMRLRFKKNSVVDGSLGSQNTICSTSSQVAEFRGDV
>NZ_AP021876.1|WP_155321034.1|558971_559217_+|hypothetical-protein
MSNNFRMFFKLQELSINLIQAQKTKTIVTHDATNTEIFNESITLELKKFRFEQLISNQHSRQAQLKQITHITLQRKIAVDN
>NZ_AP021876.1|WP_155321039.1|570633_570888_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MIQSNINEIKTHLSSYLEKVAQGETVVICKRNVPIAEIKPIKRISIKKRPVGLALKKYPGFELTDDCLAPLPEDLIDAFYGENE
>NZ_AP021876.1|WP_155321040.1|571457_571724_+|4Fe-4S-binding-protein
MEFWRAPLDARIIDITKGIVHIIEDRCKGCGYCIEFCPRNILASSKRFNKKGYHPPEVTDPEGCVNCHYCEIICPEFAIYSISDSTPI
>NZ_AP021876.1|WP_155321041.1|571743_572895_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MNHRPAVLTGTYYMTGDEACAEGALAAGCRFFGAYPITPATEIAEHMSIRLPEVGGTFIQMEDEIGAMASILGAAWSGRKSMTATSGPGFSLMMENIGLGVVTETPCVVVNVQRGGPSTGLPTMTGQADMMQARWGSHGDYEIIALAPASAQEIFYLTITAFDLSETYRTPVFIMTDEVIGHMSEKVVIPEAAAIKPRTRPKPKGRKDRFLLYKPDKNGVAPMPAAGEGYHVHVTGLTHDEKGYPVMAVEAQEQMMTRLTRKILDNHADIIRTEGHQLDDAEIVLVSYGISARTSQAAMVQARARGLKVGLLRLITVWPFCENQIRELAERVRGFVTVEINLGQVHLEVQRCAGARAACHLVGHAGGTVITPEQVIAKIEEAF
>NZ_AP021876.1|WP_155321042.1|572894_573743_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MAGATAHEKQTLDSDTHPLDDLIRTDRIPHIWCPGCGIGTAFSACLRGMRNSGIDLSKTCMVSGIGCSGRAAGYINLDSFHTTHGRAIPFATGLKLGNPQLNVVVFSGDGDLFAIGGNHFIHAARRNMDLTVICLNNLNYGMTGGQVAATTPHQAKTTTTQNGNPEAPFNLPLLAFAAGATFVARWTILHTRELTQSIEKALLKPGFSFIEVLGPCPINYGRRNREKAMDTLRLYQERTIIANHPDVTDLDIDFQKRVTLGEFVDKQRPTCIEDYDRTCRMV
>NZ_AP021876.1|WP_155321043.1|573798_574374_+|2-oxoacid:acceptor-oxidoreductase-family-protein
MQKKIVITGFGGQGVVLAGRIVGKAAAIRDGLESTLVQSYGPESRGGACSAQVTIADSQINYPYIQHPDILVAMSQAGYEKYKALLIPEGILIVDQDLVTPEAGAGGFSVPSTRFAEEMGLKMIANIIMVGFFTAISEAVTLEAARQTVRESVPKGTEEKNLKAFEKGWAYGRSSLKARAKKAAGQIGAFA
>NZ_AP021876.1|WP_155321044.1|574370_577727_+|FAD-dependent-oxidoreductase
MKSPKNRLHSVMVVGATPAGVAATNKLGELGIPVILVDADADINRRLSDDAYRLPSGIPLNFAHRPGLIRILRNPGIRCIMPASVTGVRHNPQGFAVKIETTQTFVDSSRCTLCGRCVAVCPGEAEAGCRPIAFESRMALPGRAVIDKRREPLCQNSCPLGVNAQGYIALARAGRYDKALALIRRDNVLPGICGRVCHHPCEEACRRGEVDGPLAIRDIKRFLADVEARQPQPEDATPSVPSPTRAEKIAIVGSGPAGLAAAADLARQGFAVTIFEKESQAGGLLRYGIGPHRLPRAILDRELDYIRRLGVEIQTGQPIDLGGDFSDLKNRFDAVLLTVGSWADRRLGITGESLGGVDGCLALLRQFYRGTIQALDETVAVIGDGNAAFDLARVLHRLGARVTLISWFPMEMIPADAEEVEAALAEGIPIVHSRQVTAFNGIEGRLKDLTLMPTRPGEADARGIAWPVVVDGGAAERMAVDRAVVAIGQTGAYTEGLTAIASTPGGYLGVDGDGRTRLPGVYAAGDAVSGASSVVQAMAGGRRAAGIIANDLTGAGSGVGRVPTARPPARDFVPIDPATPTCERTPMAEIPLAARQASFAEVACGYTEKQVQLEAARCLQCAACAECLECVSACGEVQAIRHDESVLSTTENVGVMIVADPELIPSIRGEDVIRAYGPAAAKPDVFAMILRGQAAAAKALVLLKGAAAGPKGHGIAFVPPDPGLNPEIRMGVFACRCNDSLGWSEGMDAYLQWLYDRPAIAHAESVNAACTPEGIAHILATVRELGLTRVVLASCVCCPLDFICSACTDQRSRLKVGLFNGTGISRAMVQTVNLRGEVLRLLKQQPELALERFTGFMDRAISQSAHLLPFPAPVRNYNFTTAVIGGNEAALTAATTLAEAGQDVILIGADPQTRQHPNIYALADTRVTGISGTLGNFEVRTHGQSMDRTFTVGGIILGEKTRDLSFYQRHEGHPNHSLHTTAQDGRDNGTPFLYPGMTSISGLFLADPSGVKISKRIKGAAAAVLAAAAMPIGPRHSRGFSVKIKENKCRGCGRCLAVCPYQAIAFRPNAVGGYYAEVDDALCKGCGNCISVCPSDAADSPYRDHVYLEQTVEKLLVS
>NZ_AP021876.1|WP_155321045.1|577812_579402_+|hydrogenase-iron-sulfur-subunit
MPEYKIIVFLCNWGPHAAFQHLQDQGADIPIEIKMIRIPCSGRITKALLLRSFEMGADGVMLLGCQSGTCRYGSGTRSAHGNTSETCRILDLMGIGADRLQLDNFLPDQPQVLLARLQAFVRQIYEMGHSPILPHASVRGEAPAALTPEAIVAAHDVFACQDCGKCTSACSLALAGKPYSPREIANRIIAGRADDPDVRQAVNACLTCGLCYERCPSAVNFPAFIRSMRAYYHHHRLVEAPTHGGFFQSMMRAMTAENLLPRRWRDLPAKIRTRAGAPVLFFGGCAPYFDIFFNRFLGVQTARILEDSLRLLNFFDVEPAVLENEICCGHDLLWTGDRENFLRLARRNARAFADSGAGELVTACPECYHTLAHDYPENGVPLPLTVTHIHEFLEREIDKGAVGFNPLGATVTFQDACRQSRFDGRSDLPRKLLARMTGTELVEMPESGSGAVCCGNSAWTGCDAYSKALQVKRITSARQTGSEVILTACPKCQIHLRCAMEDAMRAEDLQLETMDLTSAIARTIYWEGS
>NZ_AP021876.1|WP_155321046.1|579441_581889_+|hydrogenase-iron-sulfur-subunit
MTTQTTLTASAPSADSTHDALRVGVYVCHCGLNIAQTVDCDGIAERAAGLADVTVAKGIGYACSEPGQREIRDDIAEHGLNRIVVASCSPRLHEPTFRQMLKDAGLNPYLLEMANLREQCSWVHMHDKGAATDKAWDLIKMAVARVRRLSALSETRLPMTQRALVIGGGVAGIQSALDLADNGYEVVMVEKQPSIGGVMAQLDKTFPTMDCSIUILGPKMTDAGRHPRITIHTLSEVVDVNGHVGSFDVRIVKKARYVDETACTACGDCATVCPVVRPDEFNMGLSSRRAIYSPFPQAVPSAYVLNPHECLGNNPTVCTKCLEACEKKCIDFHMSDQTLTERVGTIVVATGLSPFDPRKLDEYGYTRFENVLTSLEFERLVNAGGPTQGELVRPTDRRRPKSVGFVQCVGSRSARRGKSYCSNTCCMNTVKSTLVLKEHYPDMAITVFYIDIRAFGKGFEDLFTRSRRKGAHYVRGLPGNVEQLSDGSLRVAVENTATGRLDYYDLEMLVLAVGMEPAPGTQRLQEMLGLQLTADGFFLEAHPKLQPVDAATRGVFYAGCAEGPKDIKESVTQASAAAVRAIRLMHAGHITAEAITAEVVPELCKACGKCAEVCPYNAISVDVKAKQPARITAAACNGCGTCAAECPFGAIVTNHFTDPQIVDQIDALLEERPEDKILTFACNWCSYAGADYAGVSRLQYPPNARLIRTMCSGRVDDAFIWHAFEKGAPVILVSGCHIGDCHYIDANHWTEKRIQKVRAKMEKRGIRPERLQLEWISAAEGVRFAEVMTRMESLRQSVNAAEIAETVAILTKDRG
>NZ_AP021876.1|WP_173179021.1|581984_582344_-|PilZ-domain-containing-protein
MKAVPHRRQFSRYTAVFSTKYTVKEGTFRDLIQNIGAGGAFISSRRKIIQGRTINIQIPVFAFGRRLSIMGTVVRSHPEGFAVMFKEAMEMRLLKDGRFPANLQDVTQSTIKIDKNSIS
>NZ_AP021876.1|WP_155308755.1|582340_582625_-|HU-family-DNA-binding-protein
MALTKQDIAERICSQLGFPKKQSTEITENLLELIKSTLSAGDDVLVSGFGKFCVREKNERKGRNPATGKDLMLRPRRVVTFKCSGQLRNKVNGK

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Crispr_ID: NZ_AP021876_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_5

855694-855843

Orphan

Consensus_repeat	Method
GTGGGGGGTAAACGATATGGTGTTATATCAACGGATTATGGATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021876_5

>merge|NZ_AP021876|5|855694-855843|CRISPRCasFinder
GTGGGGGGTAAACGATATGGTGTTATATCAACGGATTATGGATCAACCCAAAGCTGGCTTGATCTGATGATCTCATGTTGAAACTTTTCCGAAAGTTTACCTATGGTGGGGGGTAAACGATATGGTGTTATATCAACGGATTATGGATCA

>NZ_AP021876|5|5|855694-855843|CRISPRCasFinder
GTGGGGGGTAAACGATATGGTGTTATATCAACGGATTATGGATCA	ACCCAAAGCTGGCTTGATCTGATGATCTCATGTTGAAACTTTTCCGAAAGTTTACCTATG
GTGGGGGGTAAACGATATGGTGTTATATCAACGGATTATGGATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_155321254.1\|862730_863135_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|224404
NZ_AP021876.1\|WP_155321245.1\|851966_852668_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321250.1\|857338_857779_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321248.1\|854324_855443_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|226077
NZ_AP021876.1\|WP_155321241.1\|847522_847933_-\|endonuclease-I	unknown	unknown	gnl\|CDD\|177267
NZ_AP021876.1\|WP_155321249.1\|856499_857087_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271192
NZ_AP021876.1\|WP_155321256.1\|864826_865018_+\|ferredoxin	unknown	unknown	gnl\|CDD\|379145
NZ_AP021876.1\|WP_155321243.1\|850376_850856_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321240.1\|846767_847499_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321253.1\|862506_862734_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|198034
NZ_AP021876.1\|WP_155321251.1\|857881_859156_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_AP021876.1\|WP_155325906.1\|859152_859962_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|132060
NZ_AP021876.1\|WP_155321255.1\|863362_864013_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225484
NZ_AP021876.1\|WP_155321246.1\|852834_853233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321244.1\|851001_851901_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321257.1\|865064_865640_+\|rubrerythrin-family-protein	unknown	unknown	gnl\|CDD\|224508
NZ_AP021876.1\|WP_155321239.1\|846450_846651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321252.1\|861716_862418_+\|7-cyano-7-deazaguanine-synthase-QueC	unknown	unknown	gnl\|CDD\|284031
NZ_AP021876.1\|WP_155321247.1\|853217_853568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321242.1\|849046_850384_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_155321254.1\|862730_863135_+\|PIN-domain-containing-protein	gnl\|CDD\|224404	COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	3.92506e-12
NZ_AP021876.1\|WP_155321251.1\|857881_859156_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.49707e-27
NZ_AP021876.1\|WP_155325906.1\|859152_859962_+\|AAA-family-ATPase	gnl\|CDD\|132060	TIGR03015, pepcterm_ATPase, putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems. [Protein fate, Protein and peptide secretion and trafficking].	1.68384e-33
NZ_AP021876.1\|WP_155321255.1\|863362_864013_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	7.69673e-23
NZ_AP021876.1\|WP_155321248.1\|854324_855443_-\|IS110-family-transposase	gnl\|CDD\|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.78631e-27
NZ_AP021876.1\|WP_155321241.1\|847522_847933_-\|endonuclease-I	gnl\|CDD\|177267	PHA00159, PHA00159, endonuclease I.	3.90927e-51
NZ_AP021876.1\|WP_155321249.1\|856499_857087_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	2.90692e-53
NZ_AP021876.1\|WP_155321257.1\|865064_865640_+\|rubrerythrin-family-protein	gnl\|CDD\|224508	COG1592, COG1592, Rubrerythrin [Energy production and conversion].	1.7341e-42
NZ_AP021876.1\|WP_155321256.1\|864826_865018_+\|ferredoxin	gnl\|CDD\|379145	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I. Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins.	4.38418e-09
NZ_AP021876.1\|WP_155321252.1\|861716_862418_+\|7-cyano-7-deazaguanine-synthase-QueC	gnl\|CDD\|284031	pfam06508, QueC, Queuosine biosynthesis protein QueC. This family of proteins participate in the biosynthesis of 7-carboxy-7-deazaguanine. They catalyze the conversion of 7-deaza-7-carboxyguanine to preQ0.	3.98776e-111
NZ_AP021876.1\|WP_155321253.1\|862506_862734_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	2.75274e-07

>NZ_AP021876.1|WP_155321248.1|854324_855443_-|IS110-family-transposase
MKKIVKYVGLDVHKDSITIAIADEGRDGNVRVYGKISNDLGQIDNVMRKLISQNAELHCVYEAGPCGYPIYRHLTSKGIDCVVVAPALIPKKTGDRVKNDRRDATHLATLHRSGELTPVYVPDQADEALRDLVRARKDIQISLRKVKQQINAFLLRQGISYPGKSKWGKAHLNWLAELKMQHPAQHIALTEYLDAMEDHEARVKRIEKAIEQCCQTSRLLPVIEALQALRGISLLSAVTVVAELGDLSRFDTPAQLMAYLGLIPSEHSSGGTIKKGPITKTGNTHARRTLIESAQAYRMPARKSKAIRKRQEGLPDDVLDIAWNAQLRLCHRYRRLIAKGKNHNVVITAIARELAGFIWAIARAVPIVAAER
>NZ_AP021876.1|WP_155321247.1|853217_853568_-|hypothetical-protein
MIQIDQKRKRVQLQCKSDHDSRLTFSMDTASRQDLEFCKAFIHQMLNVEASASVLLRRSLSALRHHLEGIAIDSSLEVNKDPERGLEAFMDKLDQERDELFHAAGRKEDQHKWMKR
>NZ_AP021876.1|WP_155321246.1|852834_853233_-|hypothetical-protein
MDEKVKPSDEKVNPEFREQDSFDIDQKREDLLALWSDVFDLCKGIVESAKKGDLTVRASLLKEIVTYLKLSSDVLDKAAQRQREKLLEQEEEDREEEMLEEMDSLESEMMEEFEQVEREMYGPANPQAEPLA
>NZ_AP021876.1|WP_155321245.1|851966_852668_-|hypothetical-protein
MASEQALQRFGQKAGITWGEAFARNESKPCAVKGCPEHRYQISQYCRKHYNTSKRWGHPEGIPIHPWHYHQEIEEVSRIIKRNRDHIGIVDRRAFLRDAIRMGHEILREGRLETENTVPFPQYFDPLYEAEADPEEVLIRLAGIWLYTHRNIGPVAPCKDEKHQLYLLGNALIRFIPGAVPNNFKYHARREIGQYLYRGIGVLLVNITNTIEREIASRERTERIQGANLEVNY
>NZ_AP021876.1|WP_155321244.1|851001_851901_-|hypothetical-protein
MSINDNNNSTTETFTSPKGNNYNLTSLMIGGTDMVQANRADQPAANPDNRPAAAISGFGPGHPSLEVSGGQVREMGVQTFNGSGLKSAFGGDILSTARSAGGVPISDMSKVTDDTIVECKGATLQVKTAIRMGLLAKDAHGNIIDPSANGSIVKTTENTPQQPQRQQVKVDLGQNSRENINAIYRQMGPQLADSTVASLIGAAFRGDTNREEVIYEDTANMMGVSRQNAKAVIKKAFDDVTDRAMEFGEKQLGLPMSAIAEHLDKCSNQFKVDCYLRMFHNDLTVFDDLNKMYRTGNKY
>NZ_AP021876.1|WP_155321243.1|850376_850856_-|hypothetical-protein
MDTTKERLDRLEARIKQASHPIFREGCRYENYADIGKLLEDAINETPHTSRAVFRLMIADRFVKLNGKGIRRYIYAHHTFENLLRYCPPGTMMPRKLRTISYFASRRLAADGHLQAKVWMRFLQENAETMERHAPSLERFGSCYRSLKQIVDEETNQDG
>NZ_AP021876.1|WP_155321242.1|849046_850384_-|hypothetical-protein
MDDQLKVTCIDACMGTGKTTHAEMMFNSAPTDAKFLYITPYLKEVERIEHDCPGFVQPMTMKEANKREKETGKWPEVHPSIRNCMNKGEAIHQLISDGHNITSTHSLFKDVGEDTVELLRIQGYTLVMDEVLTPVEGLDVKAKEVKAMLDADVIRKAESLTEGGKVIKAIPGNQDGFERGYDDLRRIAKNGRLVLVDDTVLVWLLPTDLLSAFREVYLMTYMFDCQPIAAYFKMFGIEVIKKTLWCGKLVDYSEGLANGKLTGVHQKLAIHERGRVNDIGDIPSALSKEWYKRDTKVKAKQIANNLYNFFHNHTDSPLDERMWTTYKDRREAIEKAAGREASRFADGFVSNNVRATNDLDHKSALAFCCNFHMNPYIKKFFKYGGADPHEDDWALSEMLQWIWRSRIRTEKSITVYIPSKRMRSLLKDWLDKVQEWTKGAEVIPR
>NZ_AP021876.1|WP_155321241.1|847522_847933_-|endonuclease-I
MEVSTGANLRSKHIPFEYETVKVPFTQPAKKRTYTPDFILLKNGIIIETKGRFTAKDREKHLWIQKQHPDLDIRFVFTNPNGKLYKGSPTSYAQWCKKHGFQYAKGVIPDEWIREGPREDRMKAVSELPRTKKGQQ
>NZ_AP021876.1|WP_155321240.1|846767_847499_-|hypothetical-protein
MTTNTTNSVKLRETNNQTIDERIDHINTLTTAVKESFFEIAHQMKVIKDECGLKQKDYLALMDERTGYKKTSVYQFLRAHETRGNLIDFCSHVRTFPEEEGVIRPLATKSLNQDPELQAEIWEAVVASAGDNEITAKMVKDAVKEKTTGDSASTPPPPTDPPKLKFWGNSQVEKTMASEAMGNLEDFTQCVKRLPDSEGQGNLIDFCPHVGTFPEAELLHHAHCLKCKSSDAMAVYSIEADAS
>NZ_AP021876.1|WP_155321239.1|846450_846651_-|hypothetical-protein
MTYDTALIAKSLEEAEAEIRALRVHNAVLLRHNRLFAQEYEKLKERFTEYKKMAAHLPPSFSLPEI
>NZ_AP021876.1|WP_155321249.1|856499_857087_+|tyrosine-type-recombinase/integrase
MKGNPNHPKQGDTIKVDPIKEVKDIKAIKRMLQGKPRDLCLFTLGINTNLRASDLLRITAGMVKDLKPGDELTLKEQKTGKHRRITLNKAVIDAIQGLLASRSYQDDESLFVGQRGPLTVPSVNRLVKGWCRSINLKGNYGSHTLRKSFGYHQRITFGVGLPELVDIFNHSSQKQTLTYLCIQPEEVKSVYMNEL
>NZ_AP021876.1|WP_155321250.1|857338_857779_+|hypothetical-protein
MILSVCIKLKDLYEQGRNFVWPKPEGCLRCCSVRVWGHGYVLANFDGFPESLWLRRYRCPDCHCIIRMKPEGYFPRFQAATDTVVHCLRKRLSSGRWNPELSTSRQRHWLAALKRKTMAFFGFEKDWLSAFFRLQEMEQIPVSRAI
>NZ_AP021876.1|WP_155321251.1|857881_859156_+|DDE-type-integrase/transposase/recombinase
MTNSKDEEIAVFRFGVIHEFVGATKLTKNEKRRLLREKCDRKWVIPYSSKTRISENTIYRWIRRYRNSGGRIESLFPGKRCDQGKPRKLDDETINIILVTRQGQMATPVPMLLEGLKQQGVVPASTGLTTIYRLLHWHGLMDRSPKPEDRRKYEAESPNDLWQSDVMHGPQVLVDQKNRKTYLIAFIDDHSRLIVFGGFYLSENLTCFMDAFQRALAKRGLPRKLYVDNGSAYRSHKLEYTCASLAIALIHARPYKPQGKGKIERFFKTVRSQFLPTAELVSLERLNQSFTDWLENTYHQRVHRGTGMTPLSRFSRDLQCMRKAPKNLKDHFRTAVFRKVAKDRTVTLNGNLFEAPVALIGKRIQLLYHEQEPKEVEVFFENVSHGFLVPVDIHVNCRVKRDKNKNTQLEPASKTDYQGGGLWK
>NZ_AP021876.1|WP_155325906.1|859152_859962_+|AAA-family-ATPase
MSTPYTLFFGFEKEPFTSDIAVDEILETDQLTGAKNRFDYSLGLGAIYLITGEIGSGKSTAIRYLVSSLHPSEYKRIYVTATSGSILELYRLIMAELGMQPAGISRAVMTDRIKREVLEQIHGKKRHVVLIIDEASLLRLEVFVELHTLCQFEMDSKPYLPIVMAGQSHLVDHLRYPGCLPLASRIVAKSHFIGSQKNQMQAYLQHHLSIAGINRMLFEDDAVTAIHQGSGGIFRRANHLARGALVAAAMEQHKTVNAEHVRLAASEIL
>NZ_AP021876.1|WP_155321252.1|861716_862418_+|7-cyano-7-deazaguanine-synthase-QueC
MDKQKKAVVLSSGGLDSTTAMAIAKSEGFDVYSLSFSYGQRHSIELEASKRVALALSATTHLVIDIDMKLIGGSALTDEIDVPKDRDESQMTADIPVTYVPARNTIFLSYALAWAEVIGAEDIFIGVNAVDYSGYPDCRPEFIEAFEKLANLATKVGVEGSATIKIRTPLINMTKAQIIKKGTDLGVEYGMTLSCYDPNPDGLACGHCDSCILRKKGFKDAGVSDPTRYATHE
>NZ_AP021876.1|WP_155321253.1|862506_862734_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRVTTKGQITIPRKIREKLGIVPATEIDFVEENGRVYLVKKVGPANRKHTFSKLRGVATVKMTTDEIMALTREDQ
>NZ_AP021876.1|WP_155321254.1|862730_863135_+|PIN-domain-containing-protein
MSGIFIDSNVILDLFLDDPRWAQWSETTLEHYARHGRLYISPIVYGEISIGFERIEDLEQAVGTAGFQMVPIPREALFLAGKAFTTYRQRSGRKTSPLPDFFIGAQAAVLRLPLMTRDVARYRTYFPSLSLIHP
>NZ_AP021876.1|WP_155321255.1|863362_864013_+|helix-turn-helix-domain-containing-protein
MENQFQTFFERVSSALGIRNLSELATILRVNRSSITQARKNNSVPANWLLSLFRSHGLNPDWLEGGHGPKWLKPGDSVRGDFFPVPKVQARLCAGAGSFEVGNQIEDHYSFKTAWLQSKGPKDRMVLMDVFGNSMAPEIKDGDTVLIDQSQTDVFAGSIYAVGVEDTIMVKRIEKHPRKLVLLSDNKEYAPIFLSDEEMDRVRIIGKVLWICRELR
>NZ_AP021876.1|WP_155321256.1|864826_865018_+|ferredoxin
MKVIVTSQCMGDRNCNNLCPEVFEYDEDQLKSTVKFEEIPDQYKEVCRRAAAECGADAIEIVE
>NZ_AP021876.1|WP_155321257.1|865064_865640_+|rubrerythrin-family-protein
MGKFRESQTAKNLLISYAFESQATTRYIFFSNKAKEDGFIQIANIFKEVSDQELEHALRFFKFFNGGDLEVTARFLTGVVKSTYENLIAAADLEKHVHTELYPGFAKMGREEGFNRAADFWDAISVAEVQHEKTFLALADNLETGRIFKRSKDRVWRCSNCGYIHKGAGAPEKCPACVRPIGYFEIFSEAW

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Click the colored protein region to show detailed information

Crispr_ID: NZ_AP021876_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_6

1325428-1325557

Orphan

Consensus_repeat	Method
GCTGCGTTCCTACAAACCTGTTCATCCCCATCTCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021876_6

>merge|NZ_AP021876|6|1325428-1325557|CRISPRCasFinder
GCTGCGTTCCTACAAACCTGTTCATCCCCATCTCCCATTAATTTTATTAAGGCATCTGCGGCCTTATTGGATCCTATTCTACAAAGTGCCACAGCTGCGTTCCTACAAACCTGTTCATCCTCATCTCCCA

>NZ_AP021876|6|6|1325428-1325557|CRISPRCasFinder
GCTGCGTTCCTACAAACCTGTTCATCCCCATCTCCCA	TTAATTTTATTAAGGCATCTGCGGCCTTATTGGATCCTATTCTACAAAGTGCCACA
GCTGCGTTCCTACAAACCTGTTCATCCTCATCTCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_173179106.1\|1338990_1341012_-\|adenosylcobinamide-amidohydrolase	unknown	unknown	gnl\|CDD\|376682
NZ_AP021876.1\|WP_155321552.1\|1323117_1324716_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_AP021876.1\|WP_155321551.1\|1320444_1322709_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223616
NZ_AP021876.1\|WP_155309273.1\|1313960_1314854_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_AP021876.1\|WP_173179104.1\|1334963_1336139_+\|YibE/F-family-protein	unknown	unknown	gnl\|CDD\|377940
NZ_AP021876.1\|WP_155321556.1\|1330371_1332375_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234767
NZ_AP021876.1\|WP_155321554.1\|1327036_1329199_-\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227922
NZ_AP021876.1\|WP_155321549.1\|1316100_1317246_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155309278.1\|1319415_1320429_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223786
NZ_AP021876.1\|WP_155321547.1\|1315134_1315506_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321560.1\|1336376_1337852_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277318
NZ_AP021876.1\|WP_155321561.1\|1337984_1338770_-\|sirohydrochlorin-cobaltochelatase	unknown	unknown	gnl\|CDD\|368778
NZ_AP021876.1\|WP_155325929.1\|1312317_1313904_-\|diguanylate-phosphodiesterase	unknown	unknown	gnl\|CDD\|173885
NZ_AP021876.1\|WP_155321548.1\|1315562_1316078_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155321563.1\|1341112_1341478_-\|DUF2149-domain-containing-protein	unknown	unknown	gnl\|CDD\|378306
NZ_AP021876.1\|WP_155321550.1\|1317256_1319416_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155325930.1\|1341446_1342085_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_AP021876.1\|WP_155321555.1\|1329195_1330326_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_173179102.1\|1332690_1333974_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227625
NZ_AP021876.1\|WP_155309272.1\|1311303_1312302_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223674

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_173179106.1\|1338990_1341012_-\|adenosylcobinamide-amidohydrolase	gnl\|CDD\|376682	pfam01955, CbiZ, Adenosylcobinamide amidohydrolase. This prokaryotic protein family includes CbiZ which converts adenosylcobinamide (AdoCbi) to adenosylcobyric acid (AdoCby), an intermediate of the de novo coenzyme B12 biosynthetic route.	9.90504e-56
NZ_AP021876.1\|WP_155321552.1\|1323117_1324716_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.26419e-27
NZ_AP021876.1\|WP_155321551.1\|1320444_1322709_-\|AAA-family-ATPase	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	3.03938e-27
NZ_AP021876.1\|WP_173179104.1\|1334963_1336139_+\|YibE/F-family-protein	gnl\|CDD\|377940	pfam07907, YibE_F, YibE/F-like protein. The sequences featured in this family are similar to two proteins expressed by Lactococcus lactis, YibE and YibF. Most of the members of this family are annotated as being putative membrane proteins, and in fact the sequences contain a high proportion of hydrophobic residues.	3.00089e-77
NZ_AP021876.1\|WP_155321554.1\|1327036_1329199_-\|NACHT-domain-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	3.58839e-13
NZ_AP021876.1\|WP_173179102.1\|1332690_1333974_+\|hypothetical-protein	gnl\|CDD\|227625	COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism].	4.18043e-50
NZ_AP021876.1\|WP_155309278.1\|1319415_1320429_-\|hypothetical-protein	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.26965e-07
NZ_AP021876.1\|WP_155321561.1\|1337984_1338770_-\|sirohydrochlorin-cobaltochelatase	gnl\|CDD\|368778	pfam06180, CbiK, Cobalt chelatase (CbiK). This family consists of several bacterial cobalt chelatase (CbiK) proteins (EC:4.99.1.-).	9.42112e-63
NZ_AP021876.1\|WP_155325929.1\|1312317_1313904_-\|diguanylate-phosphodiesterase	gnl\|CDD\|173885	cd08520, PBP2_NikA_DppA_OppA_like_21, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_AP021876.1\|WP_155309273.1\|1313960_1314854_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.45769e-11
NZ_AP021876.1\|WP_155321560.1\|1336376_1337852_+\|metallophosphoesterase	gnl\|CDD\|277318	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	8.10664e-15
NZ_AP021876.1\|WP_155325930.1\|1341446_1342085_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	4.82547e-15
NZ_AP021876.1\|WP_155321556.1\|1330371_1332375_-\|hypothetical-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.00352049
NZ_AP021876.1\|WP_155321563.1\|1341112_1341478_-\|DUF2149-domain-containing-protein	gnl\|CDD\|378306	pfam09919, DUF2149, Uncharacterized conserved protein (DUF2149). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.07536e-41
NZ_AP021876.1\|WP_155309272.1\|1311303_1312302_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	9.53664e-107

>NZ_AP021876.1|WP_155321552.1|1323117_1324716_-|HEAT-repeat-domain-containing-protein
MMTCEEKIQLFLSAVIRDPVDQYGEYNYLLAGQCISEMINYKKSSYKIDIGLIPSEFSQLDKDLKLELISEANNEIKNWRYWQDRDLKTKIFPFICEMFRGPFEDCLIESLENRDEKNRKSSSKTLGEIESDKTVDLLIEVLKKDKNEHVRVASAYALGQIGAGRALEALVEALRTDKDIKVRKASAVALGQIGSEQAIKPLIDALKSDKDMYVRHSSAKALGRIGSIKAVDQLIDALHRDQEECVRTASAEALGKINSVIGEWALIDAFRYDKNHWVRKAIIKALGNSGTEYAEHVIIQELICDQDITFKATEIRDEAVKALGKIGSENATDQLINLLRYNLSNHSYIDVSWALGEIGSERAVDPLIEALGFDDEGEVCSALGKIGSKRAVGPLIQYFKNMKGDYPVPRMQAAYALGDIGSEAAVDTLIAALKFDDDGAVREAAAMALGSIGSMQAVDPLIDALEDDKVSAESRWSLIKIGATDRILDLFHEEKWKDFFLDYSHYTRTPFYLKEGKWFYFDQKLHREKAIP
>NZ_AP021876.1|WP_155321551.1|1320444_1322709_-|AAA-family-ATPase
MAKPIDTDTVLQKPWGDAGPSEALDQLAKLAATFMSAAVKRSADRSSFRIEQDHPNAGPGIEALNGRITAANALEIKVRLVTLPDGIRVGDNFVKCLLETSKEFQLAEPPPPGDSANREIWFEFQGKASPLGPSRESAFLKRLETLNDRAKRLQADIPVTVVEPDLDKIYKDHLEYLNPVYPCGADEINGLPTMTDWAQENYDLLAARCSVAIVSPDSVLTDFGLAIMAFVFLKKGSSLGRFVQTQLTTQLLLEMANKAPGIIVVPADRLTMGTNPYSMGRDVQSLFSSLKSMGRTVLFTGTFNELRTALGRGQGGKSDPLEPVVRHIPGIPMETLAQFAVRSEARRYGGLSRSDERKLAKEISDVLAKDRRSAQHRLLSNLVSWTMAEQSKGRAIASGSLRTFLGRLQKPTETLGGLGHRPKTERAPHVQRHFLKVLDDPGLIAFFRSRILGQDRALEQIIGRLLEMVTAEQKLYRPLCYLAQGTTGTGKSESARLLARALGIPLHTINVASMKIPEMANTRLYGSSPGFVGSYESGILEKLAKEHLGVVVEVMDLDHAPPEHRSGIADEFLQVLDDGVAESGSGTIFSCANLIFAFTSNLPEGRDEKLRRSMGFGESPSLDQIESDVRKEVKSLFSPAFLGRVGDPILFGELDHETLAIILEKAVATTIRTIADRHGEAIGQVVLENGLGMAVVSSSRLARAVLGARSFMDLGRSLGAKAYRQFRHSGPGPDGNNLIVSRNNTGELLIEMDQ
>NZ_AP021876.1|WP_155309278.1|1319415_1320429_-|hypothetical-protein
MGENVYDVNSAEDLRKAGPSDLIVLNPAPGANPLYLPKKTTEIFAYGVKNKELMHISGPTGTAKSSFLEAMNMEENFFPICKSLGFNDHKPIKLYTAEMVCFETPGELYQRRALKDGTTYDEPSIIVKALKDAEAYRETHHAVLWIKEMGRAHAPSIQGGLLDLMVKTQIRLPDGAHIDAMDVAWVCDSNYQAENDSVHTLVTFDDALKRRFRLNITLDYLTAEQEEQVLYHLIRRWRLRPELRPLVPKIVRMGQKIRYQKIEGNLQSATVPTIYGYEGLLKMMDALPHLSLRDAVFHTLLGNTNLDDSKTAMATFNEVFGLQAEAEDEVSLSRSMF
>NZ_AP021876.1|WP_155321550.1|1317256_1319416_-|hypothetical-protein
MKRGLKRKFRKKNFQKTRSYPGEYSFRSDRTKTFWKGVCLGDAFSVNHDVQQRLRAQRMFYTTCHQAQKFAAGIALDGLPHDYRPAIQPQLGPCYTNSPANLAVRAAIGLTAFLEFKHWAGDRLLTVHLKDYLENPAEHDDLWVDAASYKQLAQIVTEKVQTRLLLTDLSRYKDLSAIEIYRLFGASQQDLRFASVPEILEAVILYGDVLPDWKALRLHPVTEILIAKVEAVSAAYLLRLPTAKAHRLVELGRNWVFGICRALAPHLPVPDEQENDAKPSETARLHAEGTGWLPRYRKETEPLDLKGRIPPIDEPRAPTLFAPKSAIQQILAEVASPLRTAASGAAKDDGREPSEEVKKALDIIKQFNETLNLSNGQRQGWEDMRSEIVERSLKNSSFAKGPIEGNPTEGHCVNVPLGIGHDVSGEIFDRPVELSSNDLLYRELVREAEPIAQSLKRILYTNVEQIAQTQRICPSGTLDPMRMAMGLFSEAIFKRYRIVEKPDRRGRPVLLIACDGSGSLNRDQMAMLKTMTCAWLNATAKSRIEVLAGLYHSGQIHKNKYGPLVQWMYHPHKTPAVSRQDAARALVSLPDSGTGSQSDAISLAYMLEEAKKIAKGRVVYLVLMTDCVWNKSLRTEMSGIEEVYTFFQATYQEMEDKLHTTLVALGVEKETGFEDLLDKVIQFSHPELSDYIAAADRITRFVAGCIREQRRHTAPSRVG
>NZ_AP021876.1|WP_155321549.1|1316100_1317246_-|hypothetical-protein
MAKNASGTHRSWQTAISRRKYGFDDFGDDPAFGHWYTSGYRSGRIKIDPYEAVKPLIRHLEIYDRLRQKIERQGGIIEELEALIVVLTQKICLEGYFGKTSVALTDPTAVRSALYDIDDTLRLQARELRSGMTGYYICRIVDIYYADFNSLIVEDLYCSPGYPMPDKRFVRLMRGGRETSFLRLSPYRSQIEKRIEAQQDPEHPWEAEPDQLQYDLGRYVLNPAWHEDQYPGMHAADHFELRKFPQAIELLYMELSGELCELRGQLDPKENDILQSTVSHPFLFGFLKMLEELNGTELNELPKEGLIHYINLQKAFSEFLGIEIPWGRHKTKMSLNTLLLSNFSRLDLVGKALKKSETALEAKRQLEATAQKIMRMATQKG
>NZ_AP021876.1|WP_155321548.1|1315562_1316078_-|hypothetical-protein
MLLRIIKTIFRCLIWMTIAFSIIFPLIFFFGAKPFGILEAKYDLFRGRYEIHGYGLIHGEPQYAPILKKYGVRYRHIAGCVITDFIIDSVASYNFAMKDAIERNLGLNLDEIWMSLYGTKCHWPTSEELHTAEEFGKTSSKKPVNGSQEFQTIMQTPIMRAALTFVQICLT
>NZ_AP021876.1|WP_155321547.1|1315134_1315506_-|hypothetical-protein
MIPNAYKQDGVGSHPWIVDLDNDDRPEVILLVRPAEYGEPHADKDYRIFWAELTASGELAGYRLHQTDLDGCAAFVDVLGFLQTRDKHTHLFVNFAYGGTSPACPVLIRCSLDRFQKPPLKMP
>NZ_AP021876.1|WP_155309273.1|1313960_1314854_-|methyltransferase-domain-containing-protein
MTDEHCHFWEERWQSIIDASPLRRRRKGGAGAMGRWDKMAADFAQRTADPTAAEKRRRTVAWMKDRVALPDGARVLDIGAGPGNWSLLLAEAGARVTALEPSGAMVDILKGRMAEQGITGISTDQRTWQAVDLARDGWEGAFDLVFASMTPGIDGPANLRKMMAASKGHCYLSAFSGLGWHQWYGKLWRELFDEALDGHPGDIIHPFNLVYAMGYRPELRFDFWQRENRMPRDKAIADFTTHLEGFTDLTDALRNKVAAFVDQRCENGHFVDERRACQGMMLWSVNQKIQDPTEDLQ
>NZ_AP021876.1|WP_155325929.1|1312317_1313904_-|diguanylate-phosphodiesterase
MACGDKPEEKAPVASGDAKTTALFEVDVLRLAGGDWGYPTPFAHYPRGPGGFKMCLIFDSLLERDEKGLIPWLAESYRIADDGLTYWFVVRRNVLWQDGRPLTADDVAFSLTYANRHAATWSYIFDTIESVTLEGEQTVCVKLKQPHAAMLDNIGRTRIIPRHIWETVDRPKEFIAPEAVVGCGPYRLTDYDKAHGTYRFEAFEKYWGPRQRVGAIEYVPVGEATLAYEKGEIDLTTLSPDVMPRFKDDPTHNIVRSPAFWGYRLLMNMEAVAGLRERPVRQALAYAIDRKELVEKIARGAAVPGRMGILPPDHVMAAQGIHFYSFDPQQAELLLDGAGFRRMDTTGLRQTGDGQPLELTLLCSSQEVRMAELLRQRLGEVGIGVKVISVDGKTRDSRVRAADYQLAILGHGGWGGDPDYLRVRFAGGSMGPNAAPSHSGLVGYNAPVLLDLLNRQQTEIDPARRRQLIGDIQRELAEQVPEIPLFYTTAVSIYRPARYDGWMFMYDHHSLPHGKLSYLTRSGVALKR
>NZ_AP021876.1|WP_155309272.1|1311303_1312302_-|ABC-transporter-permease-subunit
MTLGHGKRFLEYLFTVWVIVTLNFALPRTMPGDPFLYLSADEGDEVARFSQAQQDYYQRQYGLDRPLAVQYGTYLCSLARGDMGYSIYYNQDVSRILFQRLPWTLLLVSLAVGLSSLAGCLLGSLSAYHRGRFVDRWLFPAIVAFSEIPAFLLGLVLLFTLAAGLQWFPLSGAMTHFATFEGMMGKILDIARHAALPVLTLTLVRTGGMTLLARNSMTTVLARDYVRTARAKGLHPLRILTRHTLRNAMLPIVTRIFLSLGGLVGGAILVENVFAYPGLGRLMRDAVLVHDYPMIQGIFLLVTVSVLSANFAADLVYRRLDPRIQHLESLRS
>NZ_AP021876.1|WP_155321554.1|1327036_1329199_-|NACHT-domain-containing-protein
MKIYDSIQAWQRHLHSIRDFINGENIRPRYEKPLSRIAFPIIVGEAFDCFGAMAFFTHGVDCSLQDAGTFNMTVGDRKAKFTSSNTDINIHIASCVERLLGQAYPVSEKFLSFEINPSVNSGITGLDLESPQYRIEGGSYNLAFLMHAMLDPIQNALPSDIALTGKLAQNDCGDFIIDPVEDLEQKIYAVAAYKIDKFFIPQRNINEITAYETPDGKYAIDKGNTRLEIIPVNTPDEVLKTLFGNNWFELPDFRSVYDIKYMLQQEILNSNFVRIKNILGNRDERYVDMGNYVKLQIMADQKATKTPYQTNSKKSDEDNKKPFKKRQGIKNPPILPSSLIGQFGRAKGGEKILIVGGAGSGKSTLIRKLLFQLCNEEFKNEKHLIPVYVEMGHLLEKDINFIDTIIKSFLNHMETEKGPTDFSHPSVYLNYLKKYNQWGNVIFLLDGYDELLESDKIFKIGSLRNVIITSRHLVFDLKDAAKYVVQPLEGKAINALTYNYLKNDEKRKKIDRYLESQEKTGIKNYFNNPLLLSIIVDVLQTDNVDIPREKMTQTQLIASAVKILVEKAEQDQGHYFRIWCGTRTMELANVFFRKLAEKSFYRSAIYEERLGEELDKLIDGKKIHKLGRKATNKIYRELITILTAGIGIIETSGNNEYRFFHQIFHEYFVAKYVVDEISDNPVGFKNWINAHKFDLRYEMVFQFIAGLLDISFFEQRRQEK
>NZ_AP021876.1|WP_155321555.1|1329195_1330326_-|hypothetical-protein
MNSKLMDSMNMSPEDFVFSGNIRHKAMIIDDLIEDGLDFFPRIGDWVAKVLALEVEKENSLWDAPALGPQAEYLIRIVKAVAKDVHREDVREMLGRMYRDSIERSGLHHALEGCMIAGVDDELDDVRQWALENLQAKGRIDASTDLQAFLVDMLTDDAIPYYLKQDTALVLGATGTETAKIALAHLAAKLILDPGKSPYDQIVNNSLKESVAQGLGLTGDEGVVRRLTALQIFCDDMEVKNAARNAIKRIRMAAQKTRRSSEPEQKASAFNPLETSRRYTIAASDFKKSGIIMALDETGSYEFELDVEQAPARIFLHSTTESSVPRQLRITLITNLEDTPEIACTLQRRKDDLEMYGYLDVKLATDSVKRITVDSH
>NZ_AP021876.1|WP_155321556.1|1330371_1332375_-|hypothetical-protein
MQFCYNNPKRWLPIFCQGTDCKSLYLADLIALFQEGSIKDGDREKLLQCLICNSDFVWKKWKSIVSIYSEYENHNLKKKSKDLLQDALQEFLFNCLQEAKKTVIWFKFEEMKSHKNDDFFRVFNNQMGYRLRGRRIKFVKEQVVSVSAFIDTASELDVLSTDEIEAIEALPSEEKKALNIIKILNNKILKDLKFYSRTEGYLSKKNTEFDDFTKDLLIKIKNIKEIELETRVQFLIDEIKTLSDKQRKARLILEILNEIIINNELSAIVTENFDFTKDLSPQTEEWKNKIWVEVYLSLKDTEIDDFTKDLLIKIKNIKEIGTRVRFLIEEIKDLSGEQREARLILERLILDILNEKIVEDEKSYIRIKDKLSVIDTEFYGFTNDLLERLKNSKKEIEFKIRVRFPSVSFFIDMAKVHDILSANEIDEIAGLSGEQRKANRIVIILNEKILNDKNFYIRIKDKLSVIDTEFDDFTEDLLLQMVQWENKFQTFFRPLNERLILEIFDKSVIGLKDLWGIDTGANGIDLDPKIPEASSKLFTILCLLEDGAFLKENQADVDDEISFLRCLLIEYGQRYRFGEFVLESIMEGNAKTTRARRQKARFVDRIKPDVEDGDIDKNHFIFKNCHGHPYTDLLCADEGPAFIVNGIEKALHFKCIELTQHDLEQTR
>NZ_AP021876.1|WP_173179102.1|1332690_1333974_+|hypothetical-protein
MRTGKKAFIHKPNQRLRLYRKKAARLAIGFLMALSSVALWSFDIVMADDIASQSLDGICYSPFRDGDSPNWGTFPNLYEIEEDLSMLSGLTARIRTYGNDDVLFEIPALCDEKGLDAYVGAWISSDAAANDQNISRLIQIADQGYQTTVGLIVGSEVLLRGDATEAELLAYMATVKAATGLPVSTAETYGNYLSHEAIAAAVDFILVHIHPYWDGISVESAAQYVIDRYFQIQEAYPGKEVIIGETGWPTDGDTVGEAVPSEANQKRFLDEFIRLADDNQIPYFIFEAMDEEFKVEDEGTVGGSWGLFYSDRTPKPALDDYWEDNDANNGGSTQNSEGGGGGGCFITSATSRRNLINKEAITIYLESVYTYKPGSGYALADKLTNLVYRLRGFRQKGCKTLKHMWHSVPYFNFYIAPLPGSMLGQSG
>NZ_AP021876.1|WP_173179104.1|1334963_1336139_+|YibE/F-family-protein
MFRNTSAKIQSVASSLKSFSFLVSAALIFFTAIIIISISRMDYTKYSKGMAGATITYEKCRILSILDESLKKSTYSSNILVGNQKLEIKMLTGKHKGETLTASNYLSTYNSVVAQKGQKLTVIVDELDSGKFKIRVYNYDRAPYIYLFAFVFLLTMVVVSGKKGLMSCLSLIYTFVCILLIFLPLIMRGYSPVWVAIGLVILVTSANMIFLNGISKKTFCAIMGTASGVILSGIILIIFSKLMHVSGFNLEEAESLLFIRQKTGLGVENILFAGILIASMGAVMDTALSIVSAINELHANMPNFGAMKLFKAGMNVGKDMIGTMSNTLILAFAGAALSTIIVLHFYSVQYNHLINSNFVAIEIAQALSGSMAVVLTIPLTAAITARILEPV
>NZ_AP021876.1|WP_155321560.1|1336376_1337852_+|metallophosphoesterase
MNKKLMGVGLLLFAVLVLSIPGAVVASDDEYEAYNLTIQPGSNETELNFTWFTATPTDIPQLVVCNEGGLKGGKCTNFASYYKGALRKGNHSKCMNYYEGEYEIVVVEDDTEIYACKVTMTNVKNNTKYTYVVGNGEIFSDIHKFDTQNKNNYNFIFVGDPQIGASRDEESDTAGWVETVTAALTNFENTSFILSAGDQVESSTSDSQYDGFFSPEELTSVPFAPAIGNHDTSELYAYHFNVSNEIVPDGSTDPLGYTNGGGDYWFTYGDTLFMVLNTNNSSALSHDEFMAQAIEANPTAKWRVVVFHHSIYSSARHVDDVNDLRTSMYPVIDQYDIDVVLSGHDHFYARTYQLSGGDVLDKACYTSTGRDGQEQTTCVDLIGEVAEEDLQYIGEGKVLNPEGTVYFTANSASGSKYYDFTYIEGYTNLYLAAYEQLETPTYLNVEVNRSTLTVSAYRVDTGERVDTYSIIKTDDFNRGHHHQGRSSLAKQ
>NZ_AP021876.1|WP_155321561.1|1337984_1338770_-|sirohydrochlorin-cobaltochelatase
MNENTPIVMAAFGTTSRAMETYSFIDTAVKAAFPGHPVKWAYTSRMVRAHMKKRHRANMKNPQQVLDALAEQGNPWAVVQSLHLISGHEFYRLVDDVRQCGVRTSMGLPLLTSPEDYQRTATAILGGVAAGNGTATVLIGHGTDHPAWTAYPALGQILSSAGSNVHVATIEGEADMDTTVDAVLRCGAKRVHLVPLMLVAGVHLQEDIAGDEDSWRSAFEAAGIAVSVETQGLGKNAAIIDIFIRHIRDALAIVPESASLA
>NZ_AP021876.1|WP_173179106.1|1338990_1341012_-|adenosylcobinamide-amidohydrolase
MKIGRCGKRLLLLALSGWLFLNTSAWAKAIDLTDDAGNVIHLDAAPQRIVSLVPSATEIIFAIGGGERVAGITHHSSALRGAADKPVVGGFFSPSRQRIMALKPDLIIASSLNAKRIGAPDNGIPVLVLNIRKMADAFRHIRLMGDILDRKAEAGALVEKNRRQLDLIARKVAGIPPDRRKRVMRLMGGGPIMTPGNDSFQNEMIRAAGGIAPDFGQAGSVVPVSREQWTDFNPQVLYGCGWDLKADDPIFEQEGWNQVDAVRQHRIHGFPCALTCRAGVHLGDFVAWLASLIYSEEFADADHEVLPRRVLDRRPVAIDLNCVASAVVAIDTIHDFPNKSLIIDFKSPRRIVSTLEGERDGILTVGNHYTPPPCWALTPMTGLEGLHQELYPVIDREKASTSFLFTGADMGNLSIQKETYREMTVYALVTAGVRGNAVRMSRDVGNYYEPGTINMIVLTNRRLTSRAMTRAIISATEGKTAALQDLDIRSSYLPLTAAATGTGTDNIIVVQGDGAAVDNAGGHCKMGELIARTAYAGVREAIFKQNGIVGRRNIFQRLVDRHLSVLQLVGKAECDCIDEDRAFAGRVEQALLDPMVAGFLEAALAISDGAEREKVADLKAYQDWCLDMAGRIAGQPVDALITFVADEKIPNALAMALNAVFTGVARAPQLQAN
>NZ_AP021876.1|WP_155321563.1|1341112_1341478_-|DUF2149-domain-containing-protein
MRYLKPRRTTNRGRAFGDAAFRDDDPMTGVANLFDIGLVFIVGLLLTLFSAYRLQDLFDQTSEMTIMKQKASGEMEIITKKGTTIKATRVTREAAKGRGNRLGVAYRLEDGSMVYVPDGKP
>NZ_AP021876.1|WP_155325930.1|1341446_1342085_-|MotA/TolQ/ExbB-proton-channel-family-protein
MDLGAMLKTFIYLISSSLLYPVLLLLVGLTLVIIVYGGSFLAEWLERVRLKSCAPQSLPQLLKSGQPSASVSHRVNRYVRALQQIRRQDGDVEVSVENLLQETSLKLWKSMDRLRILVRAAPSLGLIGTLIPMGTGLAALGQGDMTRLTTDLVIAFTTTVVGLAIGTLAFFLYTVRRRWIEEDIKNMELATDMLMPDEKRSGYEILKTAANH

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Crispr_ID: NZ_AP021876_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021876_7

3000202-3004962

TypeI-B

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CRISPRCasFinder
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CRT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	PILER-CR

65 spacers

cas4,cas3,cas5,cas7,cas8b1,cas6,cas2,cas1

The CRISPR arrays of NZ_AP021876_7

>merge|NZ_AP021876|7|3000202-3004962|CRISPRCasFinder,CRT,PILER-CR
GGTTCAAGCCTTGTTCTTTTGGATCGGTTTCTTCAAGTTGTCCCGGCAAAAGCATCGAGACAACATAGTTGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAAAGGTCCCGGCCGTCCAGGAGTTTGAATTTCCGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAAGTCTGCCCCGGATGTGTGTTTTCCCCACGCTACCAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAGGATTCCCCGAATAAGGAGAATTGGGCTGTTTTCAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCGCGAACCCTTGCCCAGCGCACTTCCGCAAGAAAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTCGCCGGGTGGATGCGGGAGAACGATCCGGAGGGGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCGACGTGGTGGAGCCGGACCCGGAAAACGCGAAAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTGTGTTCGCCGGACGGATCGATCTTTTCCTATGATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTACTGGTGTTGAGTATCATTATTGGGATGGTATTATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGATCCATTTACGGCGGCACCGGACACGTATTATGAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAATAATTTCTCTACGAGACCCAACCTTCCACGCAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAGGATAAATAGACATCGACCCGCCATCATAGATGGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCGCGTCGTATGGGTGATAAAGACGAAACAGCGAACATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGGCTTCTGCAGTCCTCATAACCACCGTCCCATCATCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTTCTTCTGTTAATCCTGTTGCTGATATTTTATCAAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTTGAACTTGAACTTGAAGAACTTGAACTCCCTTCTTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAATTATTGTGGTGATGGAACTGAAATACTCTTGTAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTACCCCTATAGGCAACCGGTTCCTCAGCAGAAGCTTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTGTCCGGCAAGCTCGCTTTTTGCTTCGCTACTAAATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGATTTCGACATTATATGGATGTCTGTAGTATCTTGAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTATCTGCCTCGGCTTCATCTCTTGGTACCAATGCAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTGTCCGGCAAGCTCGCTTTTTGCTTCGCTACCAAGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGTTCTCATCATCGTTATCGACCGTCAACGTTTTTCCAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGTACCTGGCAGTAAGCGTTGAGGAAAGCGTTTTCAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGTACTCGCCGCGTCGATTAAAACGCTATAAATGCCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGCTTTTTCTGACATCGAGATAATTGAGATATACGAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGACGGTGCGGCAGGAGGTAGTGGCACCGACGATCAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTCAGATGTATGGGGGATGTAGATGACTGTTTTAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGACGATATTACTGGTAGCGCATCAGGATTGAGGTGCAAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAACGGCTTCCTTGGCTTGTTTTATAGCCGTAACATTGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTGTATTCTCGAATGCTGTATAGAAAGACTCAGCAGAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCCAGGTTGCGTAGCACGTCGACGAAGCTGCCGGCCAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCCTCCCGCCTATGCACGCTCTAAGACCAACATTGTCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGAAAAAAGGTAATTGCACGGCAAATCGCAAACAGCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTCAGCCGGTCAAATTTATTTTGACTTAGTTGCGAAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAGGGTTCCAGCGCAGATAAGTAAAAAACTCGTTGGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCCAATGCTCACGCAATAGAGGTGCCCTGCCAGTGTTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGATCCTTAGATTTGGCAACCAAAACCGGATGGGCAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAGCGGCTCATCAAGTCTTATGACGAAGATGGGGCTGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTCGAACATGACGATGGGCCATACAGCCAGGAAACCCAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGATTATGGAACCACTTCACCGGAAGGAAGAAATATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTATGGAATCCAAAGCGAAGATGAACCAAATAGATTCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGATATCCTGATGGCTGATACCACCATGAGCAGTGTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCGCTCTGCCCGCCGAACCGGTCGGCCATACCCTCCAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGACTGACTGGCGACGTGTCAAAAGTCGGCACGGTTAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCGAGGATGGCACGGTTACATATGGGCATGTGGTATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTATGCCAACATACACGGATGTTATCAAACGGTCGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGAAACAGAGATCGACGGCACGGCCAGCGGAGGATAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGAGGATTCCAGCGCAGATAAGTAAAAAACTCGCTGGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCCCGAACCGATGGCGGCAGCGGCACGACCCTATAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTATTCCGGCATTCGTCTTGATTCATGCACCTATTGGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGACAGTTGACGGGATCGTCTATACCGTTAGGTCTATGGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTGCGCAACCGGTTGCGCTATTTTTTTTAATCATGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGGTGGGGACCGGTGATTTCCCATCGACGGTGCGCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGACTTCGGTTGAGGATACCGAATCAACCGAAGCGCTGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTTTTCCGCCATGAGTGGAAACCAAGAGTTTGTTGCTCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGTGTTGCTTGGCGGGACGACAACATGATCATCATCAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCTCAAGACAACTCCCAGGACCAAGGCGCTTCTTAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCCCCATGGGAAGTGCTGTGTTGAGATCGATGGTGCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGACCTGGCAACAGCTAACGCACCGGGAGATAGTGACCGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGGGCAGAAATGCAGCTGGCGGCCCGGGCCATGGTCATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCTCAAGGCGACTCCCAGGACCAAGGCGCTTCTCAGGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGTCAGATGTCCGCATGAACACTTACACACATACATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGCAGTTTGGCTATCCCCACCATACCACAACCAAAAAGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAGGGTTGCGGGCGCACCCACCGGGGACGGTGTTCGGAATGTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG

>NZ_AP021876|7|7|3000202-3004962|CRISPRCasFinder
GGTTCAAGCCTTGTTCTTTTGGATCGGTTTCTTCAAG	TTGTCCCGGCAAAAGCATCGAGACAACATAGTTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AAAGGTCCCGGCCGTCCAGGAGTTTGAATTTCCGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AAGTCTGCCCCGGATGTGTGTTTTCCCCACGCTACCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATTCCCCGAATAAGGAGAATTGGGCTGTTTTCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCGAACCCTTGCCCAGCGCACTTCCGCAAGAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCGCCGGGTGGATGCGGGAGAACGATCCGGAGGGGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGACGTGGTGGAGCCGGACCCGGAAAACGCGAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTGTTCGCCGGACGGATCGATCTTTTCCTATGAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TACTGGTGTTGAGTATCATTATTGGGATGGTATTAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATCCATTTACGGCGGCACCGGACACGTATTATGAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AATAATTTCTCTACGAGACCCAACCTTCCACGCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATAAATAGACATCGACCCGCCATCATAGATGGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCGTCGTATGGGTGATAAAGACGAAACAGCGAACAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGCTTCTGCAGTCCTCATAACCACCGTCCCATCATC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTCTTCTGTTAATCCTGTTGCTGATATTTTATCAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTGAACTTGAACTTGAAGAACTTGAACTCCCTTCTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AATTATTGTGGTGATGGAACTGAAATACTCTTGTA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TACCCCTATAGGCAACCGGTTCCTCAGCAGAAGCTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTCCGGCAAGCTCGCTTTTTGCTTCGCTACTAAAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATTTCGACATTATATGGATGTCTGTAGTATCTTGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATCTGCCTCGGCTTCATCTCTTGGTACCAATGCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTCCGGCAAGCTCGCTTTTTGCTTCGCTACCAAGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTTCTCATCATCGTTATCGACCGTCAACGTTTTTCCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTACCTGGCAGTAAGCGTTGAGGAAAGCGTTTTCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTACTCGCCGCGTCGATTAAAACGCTATAAATGCC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GCTTTTTCTGACATCGAGATAATTGAGATATACGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACGGTGCGGCAGGAGGTAGTGGCACCGACGATCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCAGATGTATGGGGGATGTAGATGACTGTTTTAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACGATATTACTGGTAGCGCATCAGGATTGAGGTGCAAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AACGGCTTCCTTGGCTTGTTTTATAGCCGTAACATTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTATTCTCGAATGCTGTATAGAAAGACTCAGCAGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCAGGTTGCGTAGCACGTCGACGAAGCTGCCGGCCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCTCCCGCCTATGCACGCTCTAAGACCAACATTGTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GAAAAAAGGTAATTGCACGGCAAATCGCAAACAGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCAGCCGGTCAAATTTATTTTGACTTAGTTGCGAAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGGTTCCAGCGCAGATAAGTAAAAAACTCGTTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCAATGCTCACGCAATAGAGGTGCCCTGCCAGTGTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ATCCTTAGATTTGGCAACCAAAACCGGATGGGCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGCGGCTCATCAAGTCTTATGACGAAGATGGGGCTG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCGAACATGACGATGGGCCATACAGCCAGGAAACCCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATTATGGAACCACTTCACCGGAAGGAAGAAATAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATGGAATCCAAAGCGAAGATGAACCAAATAGATTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATATCCTGATGGCTGATACCACCATGAGCAGTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCTCTGCCCGCCGAACCGGTCGGCCATACCCTCCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACTGACTGGCGACGTGTCAAAAGTCGGCACGGTTA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGAGGATGGCACGGTTACATATGGGCATGTGGTAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATGCCAACATACACGGATGTTATCAAACGGTCG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GAAACAGAGATCGACGGCACGGCCAGCGGAGGATA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATTCCAGCGCAGATAAGTAAAAAACTCGCTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCCGAACCGATGGCGGCAGCGGCACGACCCTATA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATTCCGGCATTCGTCTTGATTCATGCACCTATTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACAGTTGACGGGATCGTCTATACCGTTAGGTCTATGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGCGCAACCGGTTGCGCTATTTTTTTTAATCATG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGTGGGGACCGGTGATTTCCCATCGACGGTGCGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACTTCGGTTGAGGATACCGAATCAACCGAAGCGCT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTTTCCGCCATGAGTGGAAACCAAGAGTTTGTTGCTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTTGCTTGGCGGGACGACAACATGATCATCATCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CTCAAGACAACTCCCAGGACCAAGGCGCTTCTTAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCCCATGGGAAGTGCTGTGTTGAGATCGATGGTGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACCTGGCAACAGCTAACGCACCGGGAGATAGTGACC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGGCAGAAATGCAGCTGGCGGCCCGGGCCATGGTCAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CTCAAGGCGACTCCCAGGACCAAGGCGCTTCTCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTCAGATGTCCGCATGAACACTTACACACATACAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CAGTTTGGCTATCCCCACCATACCACAACCAAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGTTGCGGGCGCACCCACCGGGGACGGTGTTCGGAAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG

>NZ_AP021876|7|4|3000202-3004962|CRT
GGTTCAAGCCTTGTTCTTTTGGATCGGTTTCTTCAAG	TTGTCCCGGCAAAAGCATCGAGACAACATAGTTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AAAGGTCCCGGCCGTCCAGGAGTTTGAATTTCCGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AAGTCTGCCCCGGATGTGTGTTTTCCCCACGCTACCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATTCCCCGAATAAGGAGAATTGGGCTGTTTTCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCGAACCCTTGCCCAGCGCACTTCCGCAAGAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCGCCGGGTGGATGCGGGAGAACGATCCGGAGGGGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGACGTGGTGGAGCCGGACCCGGAAAACGCGAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTGTTCGCCGGACGGATCGATCTTTTCCTATGAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TACTGGTGTTGAGTATCATTATTGGGATGGTATTAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATCCATTTACGGCGGCACCGGACACGTATTATGAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AATAATTTCTCTACGAGACCCAACCTTCCACGCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATAAATAGACATCGACCCGCCATCATAGATGGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCGTCGTATGGGTGATAAAGACGAAACAGCGAACAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGCTTCTGCAGTCCTCATAACCACCGTCCCATCATC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTCTTCTGTTAATCCTGTTGCTGATATTTTATCAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTGAACTTGAACTTGAAGAACTTGAACTCCCTTCTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AATTATTGTGGTGATGGAACTGAAATACTCTTGTA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TACCCCTATAGGCAACCGGTTCCTCAGCAGAAGCTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTCCGGCAAGCTCGCTTTTTGCTTCGCTACTAAAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATTTCGACATTATATGGATGTCTGTAGTATCTTGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATCTGCCTCGGCTTCATCTCTTGGTACCAATGCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTCCGGCAAGCTCGCTTTTTGCTTCGCTACCAAGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTTCTCATCATCGTTATCGACCGTCAACGTTTTTCCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTACCTGGCAGTAAGCGTTGAGGAAAGCGTTTTCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTACTCGCCGCGTCGATTAAAACGCTATAAATGCC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GCTTTTTCTGACATCGAGATAATTGAGATATACGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACGGTGCGGCAGGAGGTAGTGGCACCGACGATCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCAGATGTATGGGGGATGTAGATGACTGTTTTAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACGATATTACTGGTAGCGCATCAGGATTGAGGTGCAAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AACGGCTTCCTTGGCTTGTTTTATAGCCGTAACATTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTATTCTCGAATGCTGTATAGAAAGACTCAGCAGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCAGGTTGCGTAGCACGTCGACGAAGCTGCCGGCCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCTCCCGCCTATGCACGCTCTAAGACCAACATTGTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GAAAAAAGGTAATTGCACGGCAAATCGCAAACAGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCAGCCGGTCAAATTTATTTTGACTTAGTTGCGAAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGGTTCCAGCGCAGATAAGTAAAAAACTCGTTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCAATGCTCACGCAATAGAGGTGCCCTGCCAGTGTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ATCCTTAGATTTGGCAACCAAAACCGGATGGGCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGCGGCTCATCAAGTCTTATGACGAAGATGGGGCTG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCGAACATGACGATGGGCCATACAGCCAGGAAACCCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATTATGGAACCACTTCACCGGAAGGAAGAAATAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATGGAATCCAAAGCGAAGATGAACCAAATAGATTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATATCCTGATGGCTGATACCACCATGAGCAGTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCTCTGCCCGCCGAACCGGTCGGCCATACCCTCCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACTGACTGGCGACGTGTCAAAAGTCGGCACGGTTA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGAGGATGGCACGGTTACATATGGGCATGTGGTAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATGCCAACATACACGGATGTTATCAAACGGTCG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GAAACAGAGATCGACGGCACGGCCAGCGGAGGATA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATTCCAGCGCAGATAAGTAAAAAACTCGCTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCCGAACCGATGGCGGCAGCGGCACGACCCTATA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATTCCGGCATTCGTCTTGATTCATGCACCTATTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACAGTTGACGGGATCGTCTATACCGTTAGGTCTATGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGCGCAACCGGTTGCGCTATTTTTTTTAATCATG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGTGGGGACCGGTGATTTCCCATCGACGGTGCGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACTTCGGTTGAGGATACCGAATCAACCGAAGCGCT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTTTCCGCCATGAGTGGAAACCAAGAGTTTGTTGCTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTTGCTTGGCGGGACGACAACATGATCATCATCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CTCAAGACAACTCCCAGGACCAAGGCGCTTCTTAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCCCATGGGAAGTGCTGTGTTGAGATCGATGGTGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACCTGGCAACAGCTAACGCACCGGGAGATAGTGACC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGGCAGAAATGCAGCTGGCGGCCCGGGCCATGGTCAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CTCAAGGCGACTCCCAGGACCAAGGCGCTTCTCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTCAGATGTCCGCATGAACACTTACACACATACAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CAGTTTGGCTATCCCCACCATACCACAACCAAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGTTGCGGGCGCACCCACCGGGGACGGTGTTCGGAAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG

>NZ_AP021876|7|5|3000274-3004962|PILER-CR
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AAAGGTCCCGGCCGTCCAGGAGTTTGAATTTCCGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AAGTCTGCCCCGGATGTGTGTTTTCCCCACGCTACCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATTCCCCGAATAAGGAGAATTGGGCTGTTTTCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCGAACCCTTGCCCAGCGCACTTCCGCAAGAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCGCCGGGTGGATGCGGGAGAACGATCCGGAGGGGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGACGTGGTGGAGCCGGACCCGGAAAACGCGAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTGTTCGCCGGACGGATCGATCTTTTCCTATGAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TACTGGTGTTGAGTATCATTATTGGGATGGTATTAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATCCATTTACGGCGGCACCGGACACGTATTATGAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AATAATTTCTCTACGAGACCCAACCTTCCACGCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATAAATAGACATCGACCCGCCATCATAGATGGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCGTCGTATGGGTGATAAAGACGAAACAGCGAACAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGCTTCTGCAGTCCTCATAACCACCGTCCCATCATC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTCTTCTGTTAATCCTGTTGCTGATATTTTATCAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTGAACTTGAACTTGAAGAACTTGAACTCCCTTCTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AATTATTGTGGTGATGGAACTGAAATACTCTTGTA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TACCCCTATAGGCAACCGGTTCCTCAGCAGAAGCTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTCCGGCAAGCTCGCTTTTTGCTTCGCTACTAAAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATTTCGACATTATATGGATGTCTGTAGTATCTTGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATCTGCCTCGGCTTCATCTCTTGGTACCAATGCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTCCGGCAAGCTCGCTTTTTGCTTCGCTACCAAGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTTCTCATCATCGTTATCGACCGTCAACGTTTTTCCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTACCTGGCAGTAAGCGTTGAGGAAAGCGTTTTCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTACTCGCCGCGTCGATTAAAACGCTATAAATGCC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GCTTTTTCTGACATCGAGATAATTGAGATATACGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACGGTGCGGCAGGAGGTAGTGGCACCGACGATCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCAGATGTATGGGGGATGTAGATGACTGTTTTAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACGATATTACTGGTAGCGCATCAGGATTGAGGTGCAAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AACGGCTTCCTTGGCTTGTTTTATAGCCGTAACATTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTATTCTCGAATGCTGTATAGAAAGACTCAGCAGA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCAGGTTGCGTAGCACGTCGACGAAGCTGCCGGCCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCTCCCGCCTATGCACGCTCTAAGACCAACATTGTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GAAAAAAGGTAATTGCACGGCAAATCGCAAACAGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCAGCCGGTCAAATTTATTTTGACTTAGTTGCGAAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGGTTCCAGCGCAGATAAGTAAAAAACTCGTTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCAATGCTCACGCAATAGAGGTGCCCTGCCAGTGTT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ATCCTTAGATTTGGCAACCAAAACCGGATGGGCAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGCGGCTCATCAAGTCTTATGACGAAGATGGGGCTG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TCGAACATGACGATGGGCCATACAGCCAGGAAACCCA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATTATGGAACCACTTCACCGGAAGGAAGAAATAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATGGAATCCAAAGCGAAGATGAACCAAATAGATTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GATATCCTGATGGCTGATACCACCATGAGCAGTGT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGCTCTGCCCGCCGAACCGGTCGGCCATACCCTCCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACTGACTGGCGACGTGTCAAAAGTCGGCACGGTTA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CGAGGATGGCACGGTTACATATGGGCATGTGGTAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATGCCAACATACACGGATGTTATCAAACGGTCG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GAAACAGAGATCGACGGCACGGCCAGCGGAGGATA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	AGGATTCCAGCGCAGATAAGTAAAAAACTCGCTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCCGAACCGATGGCGGCAGCGGCACGACCCTATA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TATTCCGGCATTCGTCTTGATTCATGCACCTATTGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACAGTTGACGGGATCGTCTATACCGTTAGGTCTATGG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGCGCAACCGGTTGCGCTATTTTTTTTAATCATG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGTGGGGACCGGTGATTTCCCATCGACGGTGCGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACTTCGGTTGAGGATACCGAATCAACCGAAGCGCT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TTTTCCGCCATGAGTGGAAACCAAGAGTTTGTTGCTC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	TGTTGCTTGGCGGGACGACAACATGATCATCATCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CTCAAGACAACTCCCAGGACCAAGGCGCTTCTTAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CCCCATGGGAAGTGCTGTGTTGAGATCGATGGTGC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	ACCTGGCAACAGCTAACGCACCGGGAGATAGTGACC
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGGCAGAAATGCAGCTGGCGGCCCGGGCCATGGTCAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CTCAAGGCGACTCCCAGGACCAAGGCGCTTCTCAG
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GTCAGATGTCCGCATGAACACTTACACACATACAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	CAGTTTGGCTATCCCCACCATACCACAACCAAAAA
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG	GGTTGCGGGCGCACCCACCGGGGACGGTGTTCGGAAT
GTTTCAATCCTTGTTTTGTTGGATCGGTTTCTTCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021876.1\|WP_173179391.1\|3009722_3011720_-\|CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|187861
NZ_AP021876.1\|WP_155322660.1\|2988703_2989030_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155310550.1\|3013663_3013963_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP021876.1\|WP_155322668.1\|3008008_3008737_-\|CRISPR-associated-protein-Cas5	cas5	cd09692_cas5_CAS-I-B	gnl\|CDD\|187823
NZ_AP021876.1\|WP_155326001.1\|3013077_3013332_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_AP021876.1\|WP_155322534.1\|2991070_2993338_+\|IS701-family-transposase	unknown	unknown	gnl\|CDD\|372975
NZ_AP021876.1\|WP_155322669.1\|3008749_3009703_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NZ_AP021876.1\|WP_155322665.1\|2998876_2999542_-\|cobalamin-B12-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|239021
NZ_AP021876.1\|WP_155322663.1\|2997114_2997600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021876.1\|WP_155322667.1\|3005717_3008018_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_AP021876.1\|WP_155322664.1\|2997816_2998872_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239548
NZ_AP021876.1\|WP_155322671.1\|3011901_3012564_-\|DNA-repair-protein	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NZ_AP021876.1\|WP_155322661.1\|2993784_2995812_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_AP021876.1\|WP_173179393.1\|3013328_3013667_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|226679
NZ_AP021876.1\|WP_173179388.1\|2996566_2997115_+\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|378467
NZ_AP021876.1\|WP_155322666.1\|3005114_3005699_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_AP021876.1\|WP_155322659.1\|2985796_2987959_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_AP021876.1\|WP_155310533.1\|2990218_2990452_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|237359
NZ_AP021876.1\|WP_155322672.1\|3013965_3014982_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP021876.1\|WP_155310532.1\|2989135_2990200_-\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|376752

Protein	Function_ID	Function_description	E-value
NZ_AP021876.1\|WP_173179391.1\|3009722_3011720_-\|CRISPR-associated-protein	gnl\|CDD\|187861	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as TM1802 family.	1.3459e-14
NZ_AP021876.1\|WP_155310550.1\|3013663_3013963_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.47441e-23
NZ_AP021876.1\|WP_155326001.1\|3013077_3013332_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	6.91846e-07
NZ_AP021876.1\|WP_155322534.1\|2991070_2993338_+\|IS701-family-transposase	gnl\|CDD\|372975	pfam14236, DUF4338, Domain of unknown function (DUF4338). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 206 and 475 amino acids in length.	5.1997e-61
NZ_AP021876.1\|WP_155322664.1\|2997816_2998872_-\|hypothetical-protein	gnl\|CDD\|239548	cd03465, URO-D_like, The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases. Uroporphyrinogen decarboxylase (URO-D) decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, an important branching point of the tetrapyrrole biosynthetic pathway. The methyltransferases represented here are important for ability of methanogenic organisms to use other compounds than carbon dioxide for reduction to methane.	1.69912e-36
NZ_AP021876.1\|WP_155322669.1\|3008749_3009703_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	5.12187e-51
NZ_AP021876.1\|WP_155322665.1\|2998876_2999542_-\|cobalamin-B12-binding-domain-containing-protein	gnl\|CDD\|239021	cd02070, corrinoid_protein_B12-BD, B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.	6.30121e-78
NZ_AP021876.1\|WP_173179393.1\|3013328_3013667_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|226679	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	5.16223e-54
NZ_AP021876.1\|WP_155322667.1\|3005717_3008018_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.13741e-45
NZ_AP021876.1\|WP_155322668.1\|3008008_3008737_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187823	cd09692, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.2566e-19
NZ_AP021876.1\|WP_155322671.1\|3011901_3012564_-\|DNA-repair-protein	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	1.24747e-43
NZ_AP021876.1\|WP_155322661.1\|2993784_2995812_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.22279e-75
NZ_AP021876.1\|WP_173179388.1\|2996566_2997115_+\|DUF4198-domain-containing-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	5.60013e-17
NZ_AP021876.1\|WP_155322666.1\|3005114_3005699_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	8.57308e-33
NZ_AP021876.1\|WP_155322659.1\|2985796_2987959_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	8.93104e-41
NZ_AP021876.1\|WP_155310533.1\|2990218_2990452_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|237359	PRK13352, PRK13352, phosphomethylpyrimidine synthase ThiC.	7.36285e-28
NZ_AP021876.1\|WP_155322672.1\|3013965_3014982_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.18636e-94
NZ_AP021876.1\|WP_155310532.1\|2989135_2990200_-\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	gnl\|CDD\|376752	pfam02277, DBI_PRT, Phosphoribosyltransferase. This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in bacteria. Nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase (CobT) from Salmonella enterica plays a central role in the synthesis of alpha-ribazole-5'-phosphate, an intermediate for the lower ligand of cobalamin.	4.68628e-161

>NZ_AP021876.1|WP_155322665.1|2998876_2999542_-|cobalamin-B12-binding-domain-containing-protein
MVDLKENQTLYQQLSQAVIDYDEALSEQLCKKVIDAGLDPVSAIKQGLTAGMAKVGEYYKAGRYFIPELLLCSDALYAGLDILKPHLNPQNKSQQAGKIIIGVVEGDIHDIGKNLLKAMFIASGWDVYDLGKDVSCQTFVEQTKAVQPDIVALSALMTTSMMVMPMVIESIRDLNPDIKVMVGGAPMSQDVARKFGADGYAPDIVAGVNEAERLMSSTIQE
>NZ_AP021876.1|WP_155322664.1|2997816_2998872_-|hypothetical-protein
MDDWWEKLAATYRFDPMTTMALGSIDTGFTSVAAGLSVADAFKDPEKSFNARLEGEKRFGFAPLPRIIRHTILGAHDFGGDVRLPSSPLDQAMKVVAHPVSDESGVLALKAPDPKTAGGIETAMQFSRLQHRTGGIVWFHHRSPFTMAANICGMEWFGRWMIRKPDLCDHLIDMAFDHIFNVLDYWIETFGSENIAVYNSSPMESNQLISPKHFERFALPSHQKYINRLNRSGITRYFFHICGEQKRNLSYLSGIADWHHPAIISIGHEVEINEAARFFPEDIIYGNVDPQIIQSASLQKVDEICRKSLEQGKNVDAGFILALGCDLPVFAPVENVYAIKHSVTKFRESIF
>NZ_AP021876.1|WP_155322663.1|2997114_2997600_+|hypothetical-protein
MKEVILFFGGLALMLITALGMPAQVDAHGTGHRVLNGEHLVALEFYYSDQTPMRYAEALVFSPNDAEVEHQYARTDQHGKFVFCPDATGQWVVKVSDGMGHAEQATVMVKPEKASGPTTAPSVPASFTGQGSMATWIKAVAGLSLILNACFVFYFVKRRTK
>NZ_AP021876.1|WP_173179388.1|2996566_2997115_+|DUF4198-domain-containing-protein
MIKAVDREGGEIPITRIAEKEKALFRAERPPCLAAVRCEWGGRVETTRGKKLMTRQEAEKQGFKVLKAFTSTQTSKTMFAETTAISNPLGLVFEVVPLKSPYRIGPDEPLEVKLLFDGAPLKHAVVSLNDQTRTETDAQGIARFAVKQSGRQLIAAKHIVPVKDNSEIDYLKFMTFFIFEAK
>NZ_AP021876.1|WP_155322661.1|2993784_2995812_+|TonB-dependent-receptor
MKRGIFYIWIGMIAQIINPVNGLCADEPPDYYKLDEVVISATRSETSVFDAPQSVTVVSEEEIMASPFERLEDILRYTVGFQNFSHYGQQTGGVSSHFSFRGVGRNRTLMLLDGVPLNDNFSNSIAWVAWGLIPKESIARIEIVRGPTSAAYGSEALGGVVHIITKKPAEKRETSLKFTAGSEDTYGGTAFHSQSISRFGYLLSGGYEESDGFYMVDPEGIEDYTLRRYREVGKGLGKMTYTLGDHTDLSLSALYYQHEMGKGREYFYDDLQMDQYRIGLTHRGDRMDWSGLVYLNRAEKTAYQDKLVNSTGSYIPDREETFPENQVWGAEIQNTARLFSSLTLTTGLAYKRIAMDYDVDYLTSDRDVGASGRQETLSPFMDLTSEFLDARLIINAGIRYDYIRNYDGQSWDTSTNSNDTYDSQTWDNFSPKAGIVFRPEGISSLRTSIGTGFRAPSLFDQYKLHVRGGGTSIRFPNPDLDPEKIVTWDIGGERLFFNRLWARLAYYQSWATDYIGSRTLRTYTVGSKTYKESTYDNISDVDIHGVEAELEYDIGYGLTTFFNYNYNISKIAKDEENPELEGKYLSGEPQHKYRAGLTYRNPDLINASIAFRYNVDEYADSENTEKVPDYMTLDLSVWRTFFDMVTLRLNVENVTDEDEYIEDGTLYYGSVQIDF
>NZ_AP021876.1|WP_155322534.1|2991070_2993338_+|IS701-family-transposase
MLPINRAINRSYGVAHCSFVGLKAVLSAAVESRFTVNNTIAAMQIAQKQNDILPPVPPTFNTDAIAGTIKDFGPAKVVPVSGSDWEPLWDRWVRQHHYLGYRRLLGHRLKYLAFLKDRPVAGLSWSAPALKLSARDRFIGWSPEQRKQHLHQLAANSRFLILPWVQLHNLASHVLALNIARLPADWLRHFSHRLLLLETFVDNRYFAGTCYKAANWQHIGPTQGSTKQGKGYRYHGNPKEVYLYVLDPNFRQIIDCRQQPALSCDRPSTQTKVEALVMLLEHCRWHPQLTADLNLDPFDLETIAKELVDFHQCFHDAYGRSEHHRLGLAYFSGLMSNAEAKSVEPIALEFLDQKSVRSLQMFMKNGRWDHDTMLRVHQEMLAPLIAAPDGMITVDPSDFPKKGKESVGVARQYCGPLGKTENCQSGVFIGYSSDKGYGLLNCQLYMPESWFSPEQEKRRRFNMVPEDLVFETKQQIALRLINEIVAAKYYPAKWVGADAAFGSDIEFLNALPKDLLYFAAIKSNTQVFTKKPKVGIPPYKGHGRHPTKEKVLPGQPKPRTVSEIAKSGRLSWKTVVVAEGAKGPIIAKVARIRVYMSRDGLPVGDQQWLFFRQNDDGKIRYAISNAPKKISRSEMVKASTMRWPIEQCFQEGKSQVGMDCYEHRSWPAWHRHMTFVFLALHFMLRMRLRFKKKTPLLTVPLVRKILSVVLPLRSLSSEGMYEIVQYHLRRNLIAYTSHRKKRIMLANSHNINVSL
>NZ_AP021876.1|WP_155310533.1|2990218_2990452_-|phosphomethylpyrimidine-synthase-ThiC
MKTQIELAGEGILSKQMQTVAADENIDAETIRQRVAEGQIVIPNNPYRKMQKVVGIGRGLRTKVNASPCPPRRNSIG
>NZ_AP021876.1|WP_155310532.1|2989135_2990200_-|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase
MNLIEKSIATIKPLNETVYAQARQRLADQARPAGSLGMLEDVSARLAAIFGTLDVHLPHKVIITCAGDHGVTEEGVSLFPQEVTPQMVFNFVNDGASINVLGKHAGARVIAADLGVNYDFDPQLPIFHKKVSKGTANFARVPAMTREQAEQSVSAGIEIVNELMAEGPLDMLGTGDMGIGNTTPSSAVIAAFSGIPVEKLTGRGTGIDDTALANKIRVIEKALDLHRPDPTDPLDVLAKVGGFEIGGLAGLVIGAAAAGIPVVCDGLIATAGALIACELAPAAKAYLFASHRSVEVGHAFMHERLGVEPLIDLRFRLGEGTGAAVAMELLDASTRVLCDIKTFEEVAIADAQKP
>NZ_AP021876.1|WP_155322660.1|2988703_2989030_-|hypothetical-protein
MPGEVDYIGDFILYRGYMKVGWSGLTSAVAWPDRPPEPGSLAIHSDYATRNFHYVCAIMRILIIPCPTSHLGAGEKVYPLGLARLSALVPADAAKQCLNMNLYPNPWP
>NZ_AP021876.1|WP_155322659.1|2985796_2987959_-|TonB-dependent-receptor
MRFQTKSILSTGATCLTLMLLALNVWAADDTQTAESERLKLENVTVTATDNRQVPVTEPEKTVIDFENYEKAAPIHNVVDVLRDSALVDFRGKSDIDVRSERNESPILLRGFGVRRYVNAIDGVTFDQPLHFGQIVDYSLVPLGQIESVEIIPGAHSARYSGKAMGGVINFKTKVPEVKKSAKPDVSIESSYGSFDTWDNKVALEGGYDGFNFATTYHKYTTDGYLRHGASEMENYGWMLGYALSSGGYFKYMGNYVEKDRESYVTNDPSGDYDPTYPEVLTGTSGAGSIASDTKSHIETSVQRFSFLQPTPIGDFSAGLSYTEKKEHYYTYLSAGNLVTYPNSTGKNIAFNVQDELELFDKHTLVMGFDYLAYYASFEPREEDDNRVRNHRSGFVEDTWQITDRLTVRAGLRYEDVKLSINNYSTISGWGSVAGYQVTLDPPQKYIKKDFDEWMPKFFATYKLDDHAAWLRDTSVSIGISKFWNVAPFCLFCPGRYAQVDPEHGMNYDLIVNRRLWRDIQLKVDYSYYKIKDYVAYNWDYAEYYYTDPTAPAGLEGSDMYINLDEVIRHGLEVEINGRLIDSLSFYISYAFQEYDYDGPEPAGMELGDVAKHRVNAGLRYRPLDKTVVMLDYKYQDEQIAHEVTESPDGSGNYVSYDNPMAAYNVFDLGINQTLCSGTRWVKDLAIGFYVKNLFNEEYENSQGYPMTEQSFIAKLSFRY
>NZ_AP021876.1|WP_155322666.1|3005114_3005699_-|CRISPR-associated-protein-Cas4
MISLTATHILEYLYCPRFSYFENVLDIPEHQENRFKVQKGRDVHERVRKTNPNYLRKKIGVVDKQSDVYLSSPSGIRGIVDEILFLDDGTAAPLDYKFAEYKEKLFKTYRMQLVFYGRLIQDNFNVPVNRGFIVYTRSRNKLVEVSLADTDFKELDKTIEGLWNVIGRCRYPQPTRYKRRCPDCCYRNICERNI
>NZ_AP021876.1|WP_155322667.1|3005717_3008018_-|CRISPR-associated-helicase-Cas3'
MVMIQSHQYPYKSLKQHVGEVHKASMAILGSHSEDVRKQVDDCMNYTIQFHDLGKAIPEFQKYIKNPQQYSNQKKYKAHTPVSLILWLLYAQKNHIPNNIILLVSATVWKHHGDFPSLNTMLNESLYEYEDDYKISKYPINQVIHELTIELSNPFEADEFDIQNLIDDTFFENWQIEKAAGYKIKGLLLFSILLEADRTFLALSEYHLKQKLNPMKPITISPEIVDGFLSQKSKSKKQNIKLNRLRTDLRYAIINDSDDIPNIESVTLPTGLGKTMVAAHWALKHRNQAKIARKVIIVLPYLSIIDQTVKEYQNLLEKFDPSSLILEAHSIADRKYVEDSNENQNNKFNDAIDFLADTWSADFVITTFDQFLYTLLSSKNSHLLRFHNLADALIIIDEIQALPSKLWEPLSVALLAISKTINSKVLVMSATQPEFLQARELVSSPDIIFNRQCRYQLLLKHISPINLKTFINDCIRRIDDEDWHLKRVMIVLNTRKSARTVLDSLEGKISCNIFFLSADVTPKERLATILKIKENKPCLVITTQCIEAGVDIDMDFAIRDFAPLDSIVQCAGRCNRNGLKNRADIDIVSLTNENGKKYAGFIYDKTLLEKTSMILTGRSSIHEEDIYQVMKKYFQEIRNSKDTGKIIAGRWAFWRDELNIKKLLRNESAKYCFIVTSQDQPKNDELPLKDSILSAIKTESIWDRKRKIRSLQSRISELTICVWANSNIIPEEIAEPIGCYYLLKDGYYIPGKGINIEDNNVSCKFF
>NZ_AP021876.1|WP_155322668.1|3008008_3008737_-|CRISPR-associated-protein-Cas5
MTSNQCVIFEYKGKFAHFLRAEANASAPSYPFPSRTVLLGLAGAILGLSKDSPQSVLKDSNFAVMDKVETTHWHTANLRKDPPAPLPGKIKKNEKGSSKDQRNTIITQEWLFKPRFTVFAQLPKIFHEKFEYRLKNREWYFTPCLGLSEMMADITFVDSVQPKHLEKATHGVVTLIRKDHVEFNMDSILASNSIIKSIRMPRYVTENREFEHEDYLYEVQGKSLFVKTAGAYMAGGSIIAWL
>NZ_AP021876.1|WP_155322669.1|3008749_3009703_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSNETLLSSRRELFFAYDIKMGNPNGDPDENRPRVLPDGTYYVTDVRLKRFIRDYFKSQGKYILVDTIDSKTTNLTGRVAHFLRTKNKSEVAGSELVDILLESFIDARLFGSSFAFKEQDNWKPKPVPKTLTGALQFNHGEVMHKAEAVDIHGTTTFGSDEDKSQGTFTTYFALRYAFIGFNGVANEHSAKLSKMTDEDYKEVLKAMWKSVRGSGNTRTKVGQVPRILISINYRKGVEYQFGNLSDYIKLVPANGKDEKTWSSPDDYIVDLDLLKKRLDSQKDKIESISYETSPDVKYKDEIPPEWLPLNIDTDKNA
>NZ_AP021876.1|WP_173179391.1|3009722_3011720_-|CRISPR-associated-protein
MLATMQNLALSFLWKELEGNRLPPDDLRKWFVDGKKNDPGKFFSYLVEPEGKIEKYYTICADPNRDDTAILESADIGSLKGQSAVRLPFNKPSGPRSPQIGPVIKRSYNKKKGCGPTLQILNSTLASFQKISESNNVWADYFDQVYNVFSRKKLCYAGEYLVCEKHILHKAVEIIPENKPVFLVFKNKNALLPGDIAEYRKYLSTMLNADNKYTIKEAQPVQMKHCACCGMEDVKCYPAGLSKAGVNIFNIDRDGAFPNITNSNAFLSYAICENCCDLLYVFKFHVIDKYITYIAGQETLMLPELYLDSNLLNKFLSNFQTYVEQLNKASTKTLIIEKKRLVRFLLNEKAICTLDIIWSKDSLKGQSIGNLSGQISDVLPSRLRAVDTANKKFKEIQSVFFPRRQVGDFEFDLNLSFLNELLRRPGGKKAKNINASRKLIELKRMTAEAIYKQNVIPEVRFWQEIMITADWYMRNLLEKDNPEVDCLYEGYSEKKNVSWMSFAGWIKHLSMTIYYFTFMEVMQQMKNKKTYFPVMEGLKSYFSDDCGINTDEKAYAFIIGILYGRVMQIQGAKGVNVGSNALTWLKRLNLTGKDLPELYIKIREKLLAYEAEGNETIRDIIKEIGLLGTKLGNEIDLDQVACCYYILLGQSIAVDLFPKKITNPN
>NZ_AP021876.1|WP_155322671.1|3011901_3012564_-|DNA-repair-protein
MKIATLYFNNVRLKPSQIHKLRGYVGNAFKNHDLIHNHDLTTGKVIYRYPLIQFKLIDNVPAIIAITEHAVKIFGEIFMQLDRIRIEGLEISVHEKNLKVDDVEFGFSNETFMYEFVSPWIGLNQKNYLQYRDANKGEKQKILQSAFIGNILAMAKGVGYWLEKEQRLESELQVRECPVNLKGRTMKGFKGRVQTNFMIPDHMGLGKSVSRGFGVVKGAM
>NZ_AP021876.1|WP_155326001.1|3013077_3013332_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MKRKHQKTLDAIFIRPVGGNIKWRDIEALFVELGAELSEREGSRIGVRLFGERRVFHRPHPSPNTDKGAVASIRKWLADNGVTP
>NZ_AP021876.1|WP_173179393.1|3013328_3013667_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MMNIMEINGYQAVIKYDPEIEMFRGEFIGLNGGADFYAGDIDGLRREGETSLKVFLDMCKEDGVDPRKAFSGKFNLRVSPQLHARIVTRAAAEGKSLNQWVADLLDESISAD
>NZ_AP021876.1|WP_155310550.1|3013663_3013963_-|CRISPR-associated-endonuclease-Cas2
MSSVLVWIVYDIVEDGVRNRVAKQCKKFGLQRVQKSVFLGRLENNRFDELGEICRDMIDEDTDSVYLFPFCQEDFRRINVLGQGFDRKLVNDEILAKFF
>NZ_AP021876.1|WP_155322672.1|3013965_3014982_-|CRISPR-associated-endonuclease-Cas1
MQLVINTPGTLITQKDGIFRLKNQDKRFDVSPLKVESIVITNKAMLSTQAVALSLEHNIDIVFLDGYGDPVGRVWFAKTGSTAMIRRRQLTAEVNGEKGLALVSDMISQKLDNQFQYLKKLMYARPGKEAQFEKPLATINQSIEELKDLEVADENIRNRLMGYEGTAGRAYFQCLSQLFPEKYRFAGRSRQPAKDPFNAVLNYCYGILYSRVEKACILAGLDPYVGFLHTDNYNKKSLVFDLIEPFRIFAEQSAVYLFTGRKIKDDYFDVSENAVSLNTQGKPIVVESMNTHLEESVRYRRKNVKRKHIIQHEAHRLANILLADEDEKRPEWLEIKEF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP021876_7	7.9\|3000820\|36\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3000820-3000855	36	NZ_AP021876.1	5709611-5709646	0	1.0

1. spacer 7.9|3000820|36|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to position: 5709611-5709646, mismatch: 0, identity: 1.0

tactggtgttgagtatcattattgggatggtattat	CRISPR spacer
tactggtgttgagtatcattattgggatggtattat	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP021876_7	7.1\|3000239\|35\|NZ_AP021876\|CRISPRCasFinder,CRT	3000239-3000273	35	NZ_AP021877	Desulfosarcina ovata strain 28bB2T plasmid Do28_1, complete sequence	84621-84655	3	0.914
NZ_AP021876_7	7.4\|3000457\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3000457-3000493	37	NZ_CP036540	Bacteroides fragilis strain DCMOUH0017B plasmid pBFO17_1, complete sequence	58257-58293	5	0.865
NZ_AP021876_1	1.9\|518936\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	518936-518967	32	NZ_CP020443	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence	47207-47238	6	0.812
NZ_AP021876_7	7.15\|3001258\|36\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3001258-3001293	36	MN698242	Pelagibacter phage HTVC103P, complete genome	46868-46903	7	0.806
NZ_AP021876_1	1.16\|519418\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	519418-519449	32	MN871440	UNVERIFIED: Aeromonas phage AsFcp_1, complete genome	195554-195585	8	0.75
NZ_AP021876_1	1.16\|519418\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	519418-519449	32	NC_023688	Aeromonas phage PX29, complete genome	63108-63139	8	0.75
NZ_AP021876_1	1.16\|519418\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	519418-519449	32	MH791407	UNVERIFIED: Aeromonas phage AsFcp_4, partial genome	187893-187924	8	0.75
NZ_AP021876_1	1.16\|519418\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	519418-519449	32	MH791401	UNVERIFIED: Aeromonas phage AsFcp_2, complete genome	12135-12166	8	0.75
NZ_AP021876_4	4.5\|568315\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	568315-568348	34	NZ_CP054610	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed2, complete sequence	11613-11646	8	0.765
NZ_AP021876_1	1.4\|518587\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	518587-518618	32	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	471299-471330	9	0.719
NZ_AP021876_1	1.4\|518587\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	518587-518618	32	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	432959-432990	9	0.719
NZ_AP021876_1	1.4\|518587\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	518587-518618	32	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	163345-163376	9	0.719
NZ_AP021876_1	1.4\|518587\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	518587-518618	32	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	369762-369793	9	0.719
NZ_AP021876_1	1.12\|519143\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	519143-519174	32	MN694424	Marine virus AFVG_250M468, complete genome	5888-5919	9	0.719
NZ_AP021876_1	1.23\|519832\|32\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	519832-519863	32	MK448468	Streptococcus satellite phage Javan395, complete genome	6570-6601	9	0.719
NZ_AP021876_1	1.23\|519832\|32\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	519832-519863	32	MK448466	Streptococcus satellite phage Javan390, complete genome	6570-6601	9	0.719
NZ_AP021876_4	4.8\|568512\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	568512-568545	34	NZ_CP022671	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR6, complete sequence	16427-16460	9	0.735
NZ_AP021876_4	4.19\|569240\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	569240-569273	34	NZ_CP045340	Vibrio sp. THAF190c plasmid pTHAF190c_b, complete sequence	73163-73196	9	0.735
NZ_AP021876_7	7.50\|3003803\|34\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3003803-3003836	34	CP000385	Mycobacterium sp. MCS Plasmid1, complete sequence	153991-154024	9	0.735
NZ_AP021876_7	7.50\|3003803\|34\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3003803-3003836	34	NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	180050-180083	9	0.735
NZ_AP021876_1	1.4\|518587\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	518587-518618	32	NZ_CP046054	Methylocystis heyeri strain H2 plasmid unnamed2, complete sequence	17135-17166	10	0.688
NZ_AP021876_1	1.24\|519900\|31\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	519900-519930	31	AP013940	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5B-MedDCM-OCT-S25-C20, * SEQUENCING IN PROGRESS *	15268-15298	10	0.677
NZ_AP021876_1	1.24\|519900\|31\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	519900-519930	31	AP013941	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5B-MedDCM-OCT-S32-C20, * SEQUENCING IN PROGRESS *	15260-15290	10	0.677
NZ_AP021876_4	4.19\|569240\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	569240-569273	34	MN693615	Marine virus AFVG_250M1187, complete genome	5746-5779	10	0.706
NZ_AP021876_4	4.19\|569240\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	569240-569273	34	MN693624	Marine virus AFVG_250M402, complete genome	5742-5775	10	0.706
NZ_AP021876_4	4.19\|569240\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	569240-569273	34	MN694069	Marine virus AFVG_250M891, complete genome	34620-34653	10	0.706
NZ_AP021876_4	4.19\|569240\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	569240-569273	34	MN693759	Marine virus AFVG_250M56, complete genome	36501-36534	10	0.706
NZ_AP021876_7	7.16\|3001331\|36\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3001331-3001366	36	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	1079780-1079815	10	0.722
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	KM389375	UNVERIFIED: Pseudomonas phage PEV31 clone contig00003 genomic sequence	4682-4718	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	KM389219	UNVERIFIED: Pseudomonas phage PEV32 clone contig00001 genomic sequence	23436-23472	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	MN553584	UNVERIFIED: Pseudomonas phage 4phiC20-2 clone 7, complete genome	56683-56719	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	KM411960	Pseudomonas phage phi176, complete genome	10142-10178	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	MN906996	Pseudomonas phage LY218, complete genome	10148-10184	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	MN553583	UNVERIFIED: Pseudomonas phage 4phiC20-2 clone 5, complete genome	43086-43122	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	KM411958	Pseudomonas phage RWG, complete genome	9806-9842	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	KM411959	Pseudomonas phage Pa2, complete genome	10155-10191	10	0.73
NZ_AP021876_7	7.32\|3002497\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3002497-3002533	37	NC_031063	Pseudomonas phage PEV2, complete genome	9852-9888	10	0.73
NZ_AP021876_1	1.12\|519143\|32\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	519143-519174	32	AP014858	Vibrio phage RYC DNA, complete sequence	67607-67638	11	0.656
NZ_AP021876_4	4.5\|568315\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	568315-568348	34	NZ_CP021918	Sagittula sp. P11 plasmid unnamed6, complete sequence	15778-15811	11	0.676
NZ_AP021876_4	4.31\|570036\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	570036-570069	34	AP013965	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S44-C118, * SEQUENCING IN PROGRESS *	4805-4838	11	0.676
NZ_AP021876_4	4.31\|570036\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	570036-570069	34	AP013962	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S34-C79, * SEQUENCING IN PROGRESS *	6013-6046	11	0.676
NZ_AP021876_4	4.31\|570036\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	570036-570069	34	AP013565	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5F-MedDCM-OCT-S40-C10, * SEQUENCING IN PROGRESS *, 2 ordered pieces	5753-5786	11	0.676
NZ_AP021876_4	4.31\|570036\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	570036-570069	34	AP013958	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S27-C83, * SEQUENCING IN PROGRESS *	22625-22658	11	0.676
NZ_AP021876_4	4.31\|570036\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	570036-570069	34	AP013960	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S31-C64, * SEQUENCING IN PROGRESS *	23334-23367	11	0.676
NZ_AP021876_4	4.31\|570036\|34\|NZ_AP021876\|PILER-CR,CRISPRCasFinder,CRT	570036-570069	34	AP013964	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S38-C88, * SEQUENCING IN PROGRESS *	22637-22670	11	0.676
NZ_AP021876_7	7.44\|3003370\|37\|NZ_AP021876\|CRISPRCasFinder,CRT,PILER-CR	3003370-3003406	37	NZ_CP049039	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_2, complete sequence	14130-14166	12	0.676

1. spacer 7.1|3000239|35|NZ_AP021876|CRISPRCasFinder,CRT matches to NZ_AP021877 (Desulfosarcina ovata strain 28bB2T plasmid Do28_1, complete sequence) position: , mismatch: 3, identity: 0.914

ttgtcccggcaaaagcatcgagacaacatagttgt	CRISPR spacer
ttgtcccggcaaaagcatcgaaacaacatagctat	Protospacer
*********************.*********.*.*

2. spacer 7.4|3000457|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036540 (Bacteroides fragilis strain DCMOUH0017B plasmid pBFO17_1, complete sequence) position: , mismatch: 5, identity: 0.865

aggattccccgaataaggagaattgggctgttttcaa	CRISPR spacer
tcaaatccccgaataaggagcattgggctgttttcaa	Protospacer
  .* *************** ****************

3. spacer 1.9|518936|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020443 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

caccggacccgaagaagtagaaatcaacttcg	CRISPR spacer
cgccggacccgaagaagcagaaatcttctggg	Protospacer
*.***************.*******  **  *

4. spacer 7.15|3001258|36|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to MN698242 (Pelagibacter phage HTVC103P, complete genome) position: , mismatch: 7, identity: 0.806

ttcttctgttaatcctgttgctgatattttatcaaa	CRISPR spacer
atcttctgtaaattctgttgctgatatttttggaat	Protospacer
 ******** ***.****************   **

5. spacer 1.16|519418|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MN871440 (UNVERIFIED: Aeromonas phage AsFcp_1, complete genome) position: , mismatch: 8, identity: 0.75

tccttctctgcaacagcagaagacgacaaagg	CRISPR spacer
tctttccctgcaacagcagaagacttacaatc	Protospacer
**.***.*****************    **

6. spacer 1.16|519418|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NC_023688 (Aeromonas phage PX29, complete genome) position: , mismatch: 8, identity: 0.75

tccttctctgcaacagcagaagacgacaaagg	CRISPR spacer
tctttccctgcaacagcagaagacttacaatc	Protospacer
**.***.*****************    **

7. spacer 1.16|519418|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MH791407 (UNVERIFIED: Aeromonas phage AsFcp_4, partial genome) position: , mismatch: 8, identity: 0.75

tccttctctgcaacagcagaagacgacaaagg	CRISPR spacer
tctttccctgcaacagcagaagacttacaatc	Protospacer
**.***.*****************    **

8. spacer 1.16|519418|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MH791401 (UNVERIFIED: Aeromonas phage AsFcp_2, complete genome) position: , mismatch: 8, identity: 0.75

tccttctctgcaacagcagaagacgacaaagg	CRISPR spacer
tctttccctgcaacagcagaagacttacaatc	Protospacer
**.***.*****************    **

9. spacer 4.5|568315|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054610 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

tggtcgtcatggtcaacgacaagggttttcccgc	CRISPR spacer
ctgtcggcatggtcaacgtcaagggtgtacaggc	Protospacer
. **** *********** ******* * *  **

10. spacer 1.4|518587|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacttcgacaaatccgacatccgcccaga	CRISPR spacer
gacgactacgacaaattcgacatccataatga	Protospacer
  ***** ********.********..   **

11. spacer 1.4|518587|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacttcgacaaatccgacatccgcccaga	CRISPR spacer
gacgactacgacaaattcgacatccataacga	Protospacer
  ***** ********.********..   **

12. spacer 1.4|518587|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacttcgacaaatccgacatccgcccaga	CRISPR spacer
gacgactacgacaaattcgacatccataatga	Protospacer
  ***** ********.********..   **

13. spacer 1.4|518587|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgacttcgacaaatccgacatccgcccaga	CRISPR spacer
gacgactacgacaaattcgacatccataatga	Protospacer
  ***** ********.********..   **

14. spacer 1.12|519143|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MN694424 (Marine virus AFVG_250M468, complete genome) position: , mismatch: 9, identity: 0.719

ataacactaagaaagatgcggctaagtcgatt	CRISPR spacer
gggacaataagaaagatgctgctaagtatctc	Protospacer
. .*** ************ *******   *.

15. spacer 1.23|519832|32|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to MK448468 (Streptococcus satellite phage Javan395, complete genome) position: , mismatch: 9, identity: 0.719

atatagaatagattgaaaggagtgttgccatg	CRISPR spacer
aagctccataaattgaaaggagtgatgccatt	Protospacer
* ..   ***.************* ******

16. spacer 1.23|519832|32|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to MK448466 (Streptococcus satellite phage Javan390, complete genome) position: , mismatch: 9, identity: 0.719

atatagaatagattgaaaggagtgttgccatg	CRISPR spacer
aagctccataaattgaaaggagtgatgccatt	Protospacer
* ..   ***.************* ******

17. spacer 4.8|568512|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022671 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR6, complete sequence) position: , mismatch: 9, identity: 0.735

ctcacaggcggcatgggaagattacgaaaaaact	CRISPR spacer
gactgatggggaatgggaagattacgacaaaacc	Protospacer
  *  * * ** *************** *****.

18. spacer 4.19|569240|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045340 (Vibrio sp. THAF190c plasmid pTHAF190c_b, complete sequence) position: , mismatch: 9, identity: 0.735

ctttttgcccacgacttatctccttc----acgctttg	CRISPR spacer
atttttgctcatgacttatctcctttggtaatgc----	Protospacer
 *******.**.*************.    *.**

19. spacer 7.50|3003803|34|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to CP000385 (Mycobacterium sp. MCS Plasmid1, complete sequence) position: , mismatch: 9, identity: 0.735

cccgaaccgatggcggcagcggcacgaccctata---	CRISPR spacer
cccgaagcgatggtggcagcggc---agctcgtaggt	Protospacer
****** ******.*********   * *...**

20. spacer 7.50|3003803|34|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to NC_008704 (Mycobacterium sp. KMS plasmid pMKMS02, complete sequence) position: , mismatch: 9, identity: 0.735

cccgaaccgatggcggcagcggcacgaccctata---	CRISPR spacer
cccgaagcgatggtggcagcggc---agctcgtaggt	Protospacer
****** ******.*********   * *...**

21. spacer 1.4|518587|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046054 (Methylocystis heyeri strain H2 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgacttcgacaaatccgacatccgcccaga	CRISPR spacer
aacgacgtcgtcaaatccgacatccattcgac	Protospacer
  **** *** **************...*..

22. spacer 1.24|519900|31|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to AP013940 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5B-MedDCM-OCT-S25-C20, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.677

ccacgagtttggcgggtgttgcagactgtgg	CRISPR spacer
atctcggtttggcgcgtgttgcaggctgtac	Protospacer
 . . .******** *********.****.

23. spacer 1.24|519900|31|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to AP013941 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5B-MedDCM-OCT-S32-C20, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.677

ccacgagtttggcgggtgttgcagactgtgg	CRISPR spacer
atctcggtttggcgcgtgttgcaggctgtac	Protospacer
 . . .******** *********.****.

24. spacer 4.19|569240|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MN693615 (Marine virus AFVG_250M1187, complete genome) position: , mismatch: 10, identity: 0.706

ctttttgcccacgacttatctccttcacgctttg	CRISPR spacer
cttcttgctcacgacttatctcctttgaaatcat	Protospacer
***.****.****************.. . *.

25. spacer 4.19|569240|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MN693624 (Marine virus AFVG_250M402, complete genome) position: , mismatch: 10, identity: 0.706

ctttttgcccacgacttatctccttcacgctttg	CRISPR spacer
cttcttgctcacgacttatctcctttgaaatcat	Protospacer
***.****.****************.. . *.

26. spacer 4.19|569240|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MN694069 (Marine virus AFVG_250M891, complete genome) position: , mismatch: 10, identity: 0.706

ctttttgcccacgacttatctccttcacgctttg	CRISPR spacer
cttcttgctcacgacttatctcctttgaagtcat	Protospacer
***.****.****************.. . *.

27. spacer 4.19|569240|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to MN693759 (Marine virus AFVG_250M56, complete genome) position: , mismatch: 10, identity: 0.706

ctttttgcccacgacttatctccttcacgctttg	CRISPR spacer
cttcttgctcacgacttatctcctttgaagtcat	Protospacer
***.****.****************.. . *.

28. spacer 7.16|3001331|36|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.722

ttgaacttgaacttgaagaacttgaactcccttctt	CRISPR spacer
tagaacttgaacttgaagaactagaactagaactag	Protospacer
* ******************** *****    ..

29. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to KM389375 (UNVERIFIED: Pseudomonas phage PEV31 clone contig00003 genomic sequence) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

30. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to KM389219 (UNVERIFIED: Pseudomonas phage PEV32 clone contig00001 genomic sequence) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

31. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to MN553584 (UNVERIFIED: Pseudomonas phage 4phiC20-2 clone 7, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

32. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to KM411960 (Pseudomonas phage phi176, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

33. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to MN906996 (Pseudomonas phage LY218, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

34. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to MN553583 (UNVERIFIED: Pseudomonas phage 4phiC20-2 clone 5, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

35. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to KM411958 (Pseudomonas phage RWG, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

36. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to KM411959 (Pseudomonas phage Pa2, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

37. spacer 7.32|3002497|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to NC_031063 (Pseudomonas phage PEV2, complete genome) position: , mismatch: 10, identity: 0.73

ccaggttgcgtagcacgtcgacgaagctgccggccag	CRISPR spacer
caagcttgcgtagcacgtcgaggaagctctcttcgtc	Protospacer
* ** **************** ****** .*  *

38. spacer 1.12|519143|32|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP014858 (Vibrio phage RYC DNA, complete sequence) position: , mismatch: 11, identity: 0.656

ataacactaagaaagatgcggctaagtcgatt	CRISPR spacer
gacgcaataagaaagaagcggctaagttacaa	Protospacer
.  .** ********* **********..

39. spacer 4.5|568315|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021918 (Sagittula sp. P11 plasmid unnamed6, complete sequence) position: , mismatch: 11, identity: 0.676

tggtcgtcatggtcaacgacaagggttttcccgc	CRISPR spacer
gggtcgtcatcatcaacgacaagggccccgaaga	Protospacer
 ********* .*************....   *

40. spacer 4.31|570036|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP013965 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S44-C118, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.676

ggttggctaccttctcttctatcaaccgtctcaa	CRISPR spacer
taatggctaccttcccttcgatcaacccaactta	Protospacer
 . ***********.**** *******   .. *

41. spacer 4.31|570036|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP013962 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S34-C79, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.676

ggttggctaccttctcttctatcaaccgtctcaa	CRISPR spacer
taatggctaccttcccttcgatcaacccaactta	Protospacer
 . ***********.**** *******   .. *

42. spacer 4.31|570036|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP013565 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5F-MedDCM-OCT-S40-C10, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 11, identity: 0.676

ggttggctaccttctcttctatcaaccgtctcaa	CRISPR spacer
taatggctaccttcccttcgatcaacccaactta	Protospacer
 . ***********.**** *******   .. *

43. spacer 4.31|570036|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP013958 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S27-C83, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.676

ggttggctaccttctcttctatcaaccgtctcaa	CRISPR spacer
taatggctaccttcccttcgatcaacccaactta	Protospacer
 . ***********.**** *******   .. *

44. spacer 4.31|570036|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP013960 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S31-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.676

ggttggctaccttctcttctatcaaccgtctcaa	CRISPR spacer
taatggctaccttcccttcgatcaacccaactta	Protospacer
 . ***********.**** *******   .. *

45. spacer 4.31|570036|34|NZ_AP021876|PILER-CR,CRISPRCasFinder,CRT matches to AP013964 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5F-MedDCM-OCT-S38-C88, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.676

ggttggctaccttctcttctatcaaccgtctcaa	CRISPR spacer
taatggctaccttcccttcgatcaacccaactta	Protospacer
 . ***********.**** *******   .. *

46. spacer 7.44|3003370|37|NZ_AP021876|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049039 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_2, complete sequence) position: , mismatch: 12, identity: 0.676

cgctctgcccgccgaaccggtcggccataccctccag	CRISPR spacer
caaagccgccgccgaaccgggcggccagaccctcggc	Protospacer
*.   .  ************ ****** ****** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

168505 : 282189

114

Virus_Rctr41k(17.65%)

transposase,protease,integrase,tRNA

attL 207690:207705|attR 290108:290122

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325883.1\|168505_169168_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	8.4e-30	38.7
WP_155308494.1\|169232_170018_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_155320741.1\|170040_171465_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155320742.1\|171461_172934_-	histidine kinase	NA	NA	NA	NA
WP_173178972.1\|172911_175524_-	pyruvate, water dikinase	NA	NA	NA	NA
WP_155320744.1\|175712_176399_-	hypothetical protein	NA	NA	NA	NA
WP_155308499.1\|176395_177685_-	TSUP family transporter	NA	NA	NA	NA
WP_155308500.1\|177779_178193_-	response regulator	W8CYM9	Bacillus_phage	3.0e-09	31.0
WP_155308501.1\|178161_178599_-	response regulator	NA	NA	NA	NA
WP_155308502.1\|178606_179038_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	4.7e-05	25.6
WP_155320745.1\|179065_180799_-	GHKL domain-containing protein	A0A1B1IUJ1	uncultured_Mediterranean_phage	5.1e-10	34.3
WP_155320746.1\|181101_182115_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_155308505.1\|183065_183305_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_155320747.1\|183301_184357_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-64	42.4
WP_155308510.1\|184690_184903_+	hypothetical protein	NA	NA	NA	NA
WP_162458720.1\|184899_186090_+\|transposase	transposase	NA	NA	NA	NA
WP_155308512.1\|186086_186314_+	hypothetical protein	NA	NA	NA	NA
WP_155320748.1\|187416_187713_+	hypothetical protein	NA	NA	NA	NA
WP_155320749.1\|187818_188031_+	hypothetical protein	NA	NA	NA	NA
WP_155320750.1\|188027_189218_+\|transposase	transposase	NA	NA	NA	NA
WP_155320751.1\|189345_189750_-	hypothetical protein	NA	NA	NA	NA
WP_155320752.1\|189919_190180_+	hypothetical protein	NA	NA	NA	NA
WP_155320753.1\|190362_191367_+	hypothetical protein	NA	NA	NA	NA
WP_155320754.1\|191561_191819_+	hypothetical protein	NA	NA	NA	NA
WP_155320755.1\|191902_192316_+	hypothetical protein	NA	NA	NA	NA
WP_155320756.1\|192462_193104_+	hypothetical protein	NA	NA	NA	NA
WP_155320757.1\|193235_194165_+	hypothetical protein	NA	NA	NA	NA
WP_155320758.1\|194348_194654_+	hypothetical protein	NA	NA	NA	NA
WP_155320759.1\|194655_195069_-	hypothetical protein	NA	NA	NA	NA
WP_155320760.1\|195203_195959_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	6.5e-18	29.0
WP_155320761.1\|196067_196673_+	hypothetical protein	NA	NA	NA	NA
WP_155320762.1\|196750_197761_+\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_155320763.1\|198128_199064_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320764.1\|199060_200032_-	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320765.1\|200022_200838_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|200834_202220_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|202313_203111_-	hypothetical protein	NA	NA	NA	NA
WP_155320768.1\|203493_204159_+	hypothetical protein	NA	NA	NA	NA
WP_155320769.1\|204299_204677_+	hypothetical protein	NA	NA	NA	NA
WP_155320770.1\|204813_205071_+	hypothetical protein	NA	NA	NA	NA
WP_155320771.1\|205266_206037_+	hypothetical protein	NA	NA	NA	NA
WP_155320772.1\|206169_207072_+	hypothetical protein	NA	NA	NA	NA
WP_155320773.1\|207126_207573_+	hypothetical protein	NA	NA	NA	NA
WP_155320774.1\|207647_207953_+	NIPSNAP family protein	NA	NA	NA	NA
207690:207705	attL	NA	NA	NA	NA
WP_173178977.1\|209534_210812_+	RelA/SpoT domain-containing protein	NA	NA	NA	NA
207690:207705	attL	NA	NA	NA	NA
WP_173178979.1\|211311_211596_+	hypothetical protein	NA	NA	NA	NA
WP_173178981.1\|211706_212510_+	hypothetical protein	NA	NA	NA	NA
WP_155320777.1\|212660_212918_+	hypothetical protein	NA	NA	NA	NA
WP_155320778.1\|213479_213713_+	hypothetical protein	NA	NA	NA	NA
WP_155320779.1\|213755_214223_+	hypothetical protein	NA	NA	NA	NA
WP_173178983.1\|214320_215415_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_155320781.1\|215493_216324_+	hypothetical protein	NA	NA	NA	NA
WP_155320782.1\|216476_217220_+	hypothetical protein	NA	NA	NA	NA
WP_155320783.1\|217354_217714_+	hypothetical protein	NA	NA	NA	NA
WP_155320784.1\|218323_219010_+	hypothetical protein	NA	NA	NA	NA
WP_155320785.1\|219160_219574_+	hypothetical protein	NA	NA	NA	NA
WP_155320786.1\|219914_220664_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	7.9e-08	25.9
WP_155320787.1\|220673_221021_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155320788.1\|222015_222990_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	7.8e-08	27.3
WP_173178985.1\|222986_224222_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_173178987.1\|224303_225137_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155320791.1\|226076_226478_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
226009:226024	attR	NA	NA	NA	NA
WP_155320792.1\|226580_228743_-\|transposase	IS701 family transposase	NA	NA	NA	NA
226009:226024	attR	NA	NA	NA	NA
WP_155320793.1\|228843_229104_+	toxin HicA	A0A2P1A0R7	Gordonia_phage	3.3e-06	68.4
WP_155313726.1\|229087_229417_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_155320794.1\|229599_230430_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155320795.1\|230516_230984_+	C-GCAxxG-C-C family protein	NA	NA	NA	NA
WP_155320796.1\|231126_231402_+	hypothetical protein	NA	NA	NA	NA
WP_155320797.1\|231522_231864_+	hypothetical protein	NA	NA	NA	NA
WP_155320798.1\|232646_233354_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_155320799.1\|233427_233799_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_173178989.1\|233899_234736_+\|transposase	transposase	NA	NA	NA	NA
WP_155320801.1\|234898_236203_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155320802.1\|236570_236759_-	hypothetical protein	NA	NA	NA	NA
WP_155325884.1\|236775_237189_-	peptidoglycan-binding protein	NA	NA	NA	NA
WP_155320803.1\|237715_238285_-	hypothetical protein	NA	NA	NA	NA
WP_155320804.1\|238387_239716_-	hypothetical protein	NA	NA	NA	NA
WP_155320805.1\|239728_240352_-	peptidoglycan-binding protein	NA	NA	NA	NA
WP_155320806.1\|240525_240819_-	hypothetical protein	NA	NA	NA	NA
WP_155320807.1\|240827_241577_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_155320808.1\|241621_242587_-	hypothetical protein	NA	NA	NA	NA
WP_155320809.1\|242610_244836_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_155320810.1\|245142_246630_+	FHA domain-containing protein	NA	NA	NA	NA
WP_155320811.1\|246700_247657_-	FHA domain-containing protein	NA	NA	NA	NA
WP_155320812.1\|247696_249361_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_155320813.1\|249368_250391_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_155320814.1\|250844_251723_+	hypothetical protein	NA	NA	NA	NA
WP_173178991.1\|251818_253408_+	protein kinase	A0A0H4Y184	Salmon_gill_poxvirus	1.8e-17	30.9
WP_155325885.1\|253493_254222_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_155320816.1\|254228_255476_+	protein kinase	S4VYI4	Pandoravirus	1.6e-21	31.3
WP_155320817.1\|255827_256250_+	hypothetical protein	NA	NA	NA	NA
WP_155320818.1\|256285_257134_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_155309708.1\|257293_257674_+	response regulator	NA	NA	NA	NA
WP_155320819.1\|258271_259216_+	RNA polymerase factor sigma-32	A0A248SJA5	Salicola_phage	9.9e-24	30.9
WP_173178993.1\|259328_261002_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_155320821.1\|260998_261814_+	hypothetical protein	NA	NA	NA	NA
WP_155320822.1\|261847_262699_+	P-loop NTPase	NA	NA	NA	NA
WP_155320823.1\|262700_263480_+	RimK family alpha-L-glutamate ligase	A0A1D7SR78	Cyanophage	3.5e-19	32.1
WP_155320824.1\|263466_264645_+	HD domain-containing protein	NA	NA	NA	NA
WP_155314167.1\|264743_265436_+	UPF0280 family protein	NA	NA	NA	NA
WP_155309701.1\|265578_265974_+	hypothetical protein	NA	NA	NA	NA
WP_155320825.1\|266006_268634_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	3.8e-41	23.3
WP_155320826.1\|268651_270676_+	N-acetylmuramoyl-L-alanine amidase	M1HNA7	Bacillus_virus	9.5e-16	32.6
WP_155320827.1\|270716_271508_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_173178995.1\|271694_272996_+	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_155309697.1\|273064_273496_+	ACT domain-containing protein	NA	NA	NA	NA
WP_155309696.1\|273687_273909_+	hypothetical protein	NA	NA	NA	NA
WP_155309695.1\|274009_276322_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_155320828.1\|276354_278196_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_155320829.1\|278223_278793_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_155320830.1\|278789_279473_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_173178997.1\|279469_280087_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_155320832.1\|280190_280886_+	potassium transporter	NA	NA	NA	NA
WP_155320833.1\|281094_282189_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1IRE1	uncultured_Mediterranean_phage	2.4e-13	29.2
290108:290122	attR	NA	NA	NA	NA

DBSCAN-SWA_2

301613 : 334419

Shigella_phage(50.0%)

transposase,integrase

attL 311771:311785|attR 341402:341416

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155320855.1\|301613_303140_+\|transposase	transposase	NA	NA	NA	NA
WP_155320856.1\|303385_304093_-	hypothetical protein	NA	NA	NA	NA
WP_155325887.1\|304338_304860_-	NYN domain-containing protein	NA	NA	NA	NA
WP_155320857.1\|305180_305687_+	hypothetical protein	NA	NA	NA	NA
WP_155320858.1\|305764_307009_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_173179000.1\|306995_307814_+	AAA family ATPase	NA	NA	NA	NA
WP_155320860.1\|307835_308009_+	hypothetical protein	NA	NA	NA	NA
WP_155320861.1\|308788_309205_+	VOC family protein	NA	NA	NA	NA
WP_155320862.1\|309424_311275_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320863.1\|311408_312416_-\|transposase	IS1 family transposase	NA	NA	NA	NA
311771:311785	attL	NA	NA	NA	NA
WP_155320864.1\|312608_312911_-	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	3.4e-10	39.3
WP_155320865.1\|313361_313787_+	hypothetical protein	NA	NA	NA	NA
WP_155320866.1\|313829_314930_+	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_173179001.1\|316151_316547_-\|transposase	transposase	NA	NA	NA	NA
WP_155308342.1\|316732_316906_-	hypothetical protein	NA	NA	NA	NA
WP_173179000.1\|316927_317746_-	AAA family ATPase	NA	NA	NA	NA
WP_155320858.1\|317732_318977_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_155320857.1\|319054_319561_-	hypothetical protein	NA	NA	NA	NA
WP_155320867.1\|320042_320522_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155308342.1\|320825_320999_-	hypothetical protein	NA	NA	NA	NA
WP_162458704.1\|321020_321839_-	AAA family ATPase	NA	NA	NA	NA
WP_155308344.1\|321825_323070_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	1.4e-06	23.9
WP_155320868.1\|323147_323654_-	hypothetical protein	NA	NA	NA	NA
WP_173179002.1\|324734_325964_-	response regulator	NA	NA	NA	NA
WP_155320870.1\|326192_327143_+	GDP-mannose 4,6-dehydratase	A0A2K9KZK0	Tupanvirus	1.9e-83	48.6
WP_155320871.1\|327291_328356_-	glycosyltransferase	NA	NA	NA	NA
WP_155320872.1\|328406_329213_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_155320873.1\|329626_331639_+	cobalamin B12-binding domain-containing protein	A0A2H4N7I5	Lake_Baikal_phage	1.3e-28	27.5
WP_155320767.1\|332142_332940_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|333033_334419_+\|transposase	transposase	NA	NA	NA	NA
341402:341416	attR	NA	NA	NA	NA

DBSCAN-SWA_3

813831 : 859156

uncultured_Caudovirales_phage(15.38%)

integrase,tRNA,transposase,capsid,head

attL 856273:856288|attR 860418:860433

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321195.1\|813831_814839_-\|capsid	major capsid protein	NA	NA	NA	NA
WP_155321196.1\|814872_815244_-\|head	head decoration protein	NA	NA	NA	NA
WP_155321197.1\|815267_816254_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.0e-28	30.7
WP_155321198.1\|816250_817003_-	hypothetical protein	A0A2H4IYU7	uncultured_Caudovirales_phage	3.0e-63	53.8
WP_155321199.1\|817135_818623_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	7.8e-100	42.7
WP_155321200.1\|818812_820300_-	hypothetical protein	M4MHG0	Vibrio_phage	1.1e-114	46.6
WP_155321201.1\|820296_820755_-	hypothetical protein	NA	NA	NA	NA
WP_155321202.1\|820754_821000_-	hypothetical protein	NA	NA	NA	NA
WP_155321203.1\|820996_821401_-	hypothetical protein	NA	NA	NA	NA
WP_155321204.1\|821405_821582_-	hypothetical protein	NA	NA	NA	NA
WP_155321205.1\|821604_822066_-	hypothetical protein	NA	NA	NA	NA
WP_155321206.1\|822238_822556_-	hypothetical protein	A0A0N7AEB9	Bacillus_phage	2.5e-08	32.0
WP_155321207.1\|822555_822945_-	hypothetical protein	NA	NA	NA	NA
WP_155321208.1\|822941_823532_-	DUF1018 domain-containing protein	NA	NA	NA	NA
WP_155321209.1\|823578_823761_-	hypothetical protein	NA	NA	NA	NA
WP_155321210.1\|824106_824556_-	hypothetical protein	NA	NA	NA	NA
WP_155321211.1\|824518_824830_-	hypothetical protein	NA	NA	NA	NA
WP_155321212.1\|824845_825166_-	hypothetical protein	NA	NA	NA	NA
WP_155321213.1\|825879_826464_-	hypothetical protein	NA	NA	NA	NA
WP_155321214.1\|826485_827028_-	hypothetical protein	NA	NA	NA	NA
WP_173179049.1\|827256_827868_-	DUF3164 family protein	A0A219VHC9	Ochrobactrum_phage	3.3e-28	36.6
WP_155321216.1\|827858_828065_-	hypothetical protein	NA	NA	NA	NA
WP_155321217.1\|828079_828496_-	hypothetical protein	NA	NA	NA	NA
WP_155321218.1\|828508_829684_-	AAA family ATPase	Q5ZR05	Pseudomonas_phage	6.7e-46	33.9
WP_155321219.1\|829655_831356_-	hypothetical protein	Q6QIE0	Burkholderia_phage	1.6e-56	29.9
WP_155321220.1\|831357_832074_-	hypothetical protein	NA	NA	NA	NA
WP_155321221.1\|832458_832749_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_155321222.1\|832889_833423_-	hypothetical protein	NA	NA	NA	NA
WP_155321223.1\|833415_833748_-	hypothetical protein	NA	NA	NA	NA
WP_155321224.1\|833800_834388_-	hypothetical protein	NA	NA	NA	NA
WP_155321225.1\|834449_834680_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155321226.1\|834692_835289_+	hypothetical protein	NA	NA	NA	NA
WP_173179050.1\|835378_835909_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155321228.1\|836130_836595_+	hypothetical protein	NA	NA	NA	NA
WP_155321229.1\|836688_837036_+	hypothetical protein	NA	NA	NA	NA
WP_155321230.1\|837140_837539_+	hypothetical protein	NA	NA	NA	NA
WP_155321231.1\|837736_838963_-	type II secretion system inner membrane protein GspF	NA	NA	NA	NA
WP_155321232.1\|838975_840388_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_155325905.1\|840394_841309_-\|tRNA	methionyl-tRNA formyltransferase	NA	NA	NA	NA
WP_155321233.1\|841332_841842_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.1e-20	41.3
WP_155321234.1\|841899_842844_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_155321235.1\|843172_844870_+\|integrase	tyrosine-type recombinase/integrase	A0A059XK29	uncultured_phage	1.5e-09	30.9
WP_155321236.1\|844953_845202_-	hypothetical protein	NA	NA	NA	NA
WP_155321237.1\|845434_845671_-	hypothetical protein	NA	NA	NA	NA
WP_155321238.1\|845681_846413_-	hypothetical protein	NA	NA	NA	NA
WP_155321239.1\|846450_846651_-	hypothetical protein	NA	NA	NA	NA
WP_155321240.1\|846767_847499_-	hypothetical protein	NA	NA	NA	NA
WP_155321241.1\|847522_847933_-	endonuclease I	A0A2D2W4Y6	Ralstonia_phage	2.4e-35	51.6
WP_155321242.1\|849046_850384_-	hypothetical protein	A0A1P8CWT6	Bacillus_phage	5.4e-68	34.7
WP_155321243.1\|850376_850856_-	hypothetical protein	NA	NA	NA	NA
WP_155321244.1\|851001_851901_-	hypothetical protein	NA	NA	NA	NA
WP_155321245.1\|851966_852668_-	hypothetical protein	NA	NA	NA	NA
WP_155321246.1\|852834_853233_-	hypothetical protein	NA	NA	NA	NA
WP_155321247.1\|853217_853568_-	hypothetical protein	NA	NA	NA	NA
WP_155321248.1\|854324_855443_-\|transposase	IS110 family transposase	NA	NA	NA	NA
856273:856288	attL	NA	NA	NA	NA
WP_155321249.1\|856499_857087_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	1.2e-22	40.8
WP_155321250.1\|857338_857779_+	hypothetical protein	NA	NA	NA	NA
WP_155321251.1\|857881_859156_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
860418:860433	attR	NA	NA	NA	NA

DBSCAN-SWA_4

911509 : 916555

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321294.1\|911509_912376_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-40	37.9
WP_155309104.1\|912591_912840_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A9D9X7	Lactobacillus_prophage	2.7e-05	38.4
WP_155321295.1\|912840_913176_+	type II toxin-antitoxin system PemK/MazF family toxin	A9D9Y1	Lactobacillus_prophage	1.7e-18	46.5
WP_155321296.1\|913287_913848_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	9.6e-51	54.1
WP_155309107.1\|913861_914260_-	PIN domain-containing protein	NA	NA	NA	NA
WP_155309108.1\|914289_914520_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_155321297.1\|914588_915479_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	4.4e-98	59.5
WP_155309110.1\|915475_916555_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.9e-89	49.1

DBSCAN-SWA_5

1066635 : 1082008

Shigella_phage(50.0%)

transposase,integrase

attL 1061362:1061375|attR 1076931:1076944

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1061362:1061375	attL	NA	NA	NA	NA
WP_155321396.1\|1066635_1067880_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_173179000.1\|1067866_1068685_+	AAA family ATPase	NA	NA	NA	NA
WP_155320860.1\|1068706_1068880_+	hypothetical protein	NA	NA	NA	NA
WP_155321397.1\|1069105_1069381_-	HU family DNA-binding protein	NA	NA	NA	NA
WP_155321398.1\|1069629_1070562_-	hypothetical protein	NA	NA	NA	NA
WP_155320763.1\|1070766_1071702_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320764.1\|1071698_1072670_-	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320765.1\|1072660_1073476_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|1073472_1074858_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|1074951_1075749_-	hypothetical protein	NA	NA	NA	NA
WP_155321399.1\|1075996_1076449_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_155321400.1\|1076598_1077378_-\|transposase	transposase	NA	NA	NA	NA
1076931:1076944	attR	NA	NA	NA	NA
WP_155321401.1\|1077679_1078696_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155321402.1\|1079184_1080459_-	hypothetical protein	NA	NA	NA	NA
WP_173178989.1\|1080699_1081536_-\|transposase	transposase	NA	NA	NA	NA
WP_155320799.1\|1081636_1082008_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_6

1143138 : 1214829

Hokovirus(10.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321445.1\|1143138_1143786_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_155321446.1\|1143895_1144972_-	c-type cytochrome	NA	NA	NA	NA
WP_155309777.1\|1145330_1146080_+	hypothetical protein	NA	NA	NA	NA
WP_155321447.1\|1146096_1147077_+	hypothetical protein	NA	NA	NA	NA
WP_173179088.1\|1147123_1148974_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_155321449.1\|1150077_1150266_+	hypothetical protein	NA	NA	NA	NA
WP_155321450.1\|1150271_1153085_+	cache domain-containing protein	NA	NA	NA	NA
WP_155320657.1\|1153517_1154486_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155321451.1\|1154578_1157230_+	response regulator	A0A1V0SGX0	Hokovirus	6.1e-71	34.5
WP_173179090.1\|1157272_1158499_+	hypothetical protein	NA	NA	NA	NA
WP_155321453.1\|1158803_1159343_-	hypothetical protein	NA	NA	NA	NA
WP_155321454.1\|1159332_1159497_-	hypothetical protein	NA	NA	NA	NA
WP_155321455.1\|1160146_1160671_-	hypothetical protein	NA	NA	NA	NA
WP_173178989.1\|1160935_1161772_-\|transposase	transposase	NA	NA	NA	NA
WP_155320799.1\|1161872_1162244_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_155321456.1\|1162988_1163441_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_155321457.1\|1163567_1164536_-	hypothetical protein	NA	NA	NA	NA
WP_155321458.1\|1164571_1165957_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155321459.1\|1165995_1168218_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_155321460.1\|1168540_1169461_+	EamA family transporter RarD	NA	NA	NA	NA
WP_155321461.1\|1169665_1170436_+	hypothetical protein	NA	NA	NA	NA
WP_155321462.1\|1170560_1173212_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	7.0e-176	44.1
WP_155321463.1\|1173215_1174055_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_155321464.1\|1174051_1175026_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_155325920.1\|1175874_1178931_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_155321465.1\|1179032_1179800_+	hydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_155321466.1\|1179820_1180738_-	DUF2156 domain-containing protein	NA	NA	NA	NA
WP_155309165.1\|1180734_1181148_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_155309166.1\|1181262_1182177_-	diguanylate cyclase	W8CYM9	Bacillus_phage	5.1e-09	31.6
WP_155309167.1\|1182338_1184135_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	4.8e-27	27.4
WP_155321467.1\|1184156_1185443_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_155309169.1\|1185457_1185982_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_155321468.1\|1186009_1187803_+	hypothetical protein	NA	NA	NA	NA
WP_155321469.1\|1188009_1188663_+	peptidoglycan-binding protein	NA	NA	NA	NA
WP_155321470.1\|1188704_1191509_+	metallophosphoesterase	NA	NA	NA	NA
WP_173179092.1\|1191517_1192729_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_155321472.1\|1193188_1196377_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_155321473.1\|1196428_1197022_-	HD domain-containing protein	NA	NA	NA	NA
WP_155321474.1\|1197195_1200009_+\|tRNA	isoleucine--tRNA ligase	A0A2K9L260	Tupanvirus	5.6e-83	25.4
WP_155325921.1\|1200133_1200589_+	signal peptidase II	NA	NA	NA	NA
WP_155321475.1\|1200599_1202033_+	hypothetical protein	NA	NA	NA	NA
WP_155321476.1\|1202063_1202273_+	hypothetical protein	NA	NA	NA	NA
WP_155321477.1\|1202432_1203605_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155321478.1\|1203733_1204699_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_155325922.1\|1204757_1206065_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_155321479.1\|1206066_1206840_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-09	20.7
WP_155309183.1\|1206839_1207556_+	ATP-binding cassette domain-containing protein	A0A2H4UU96	Bodo_saltans_virus	2.9e-07	26.8
WP_155321480.1\|1207682_1208720_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_155309185.1\|1208909_1209818_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	9.8e-29	33.0
WP_155321481.1\|1209976_1210945_+	peptidoglycan DD-metalloendopeptidase family protein	G9BW84	Planktothrix_phage	1.4e-20	44.8
WP_155325923.1\|1211204_1213733_+	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_155321482.1\|1213739_1214219_+	YfcE family phosphodiesterase	NA	NA	NA	NA
WP_155321483.1\|1214520_1214829_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	9.7e-13	42.4

DBSCAN-SWA_7

1467508 : 1496170

Brucella_phage(25.0%)

transposase,integrase

attL 1463268:1463282|attR 1496949:1496963

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1463268:1463282	attL	NA	NA	NA	NA
WP_155321248.1\|1467508_1468627_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155321641.1\|1468717_1469185_+	hypothetical protein	NA	NA	NA	NA
WP_155321642.1\|1469349_1469670_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	7.7e-13	48.1
WP_155321643.1\|1469678_1469987_+	transcriptional regulator	A0A2I7QLH8	Vibrio_phage	3.6e-07	56.0
WP_155321644.1\|1470378_1472067_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_155321250.1\|1472207_1472648_+	hypothetical protein	NA	NA	NA	NA
WP_155321251.1\|1472750_1474025_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_155325906.1\|1474021_1474831_+	AAA family ATPase	NA	NA	NA	NA
WP_155321645.1\|1475961_1476390_-	hotdog fold thioesterase	NA	NA	NA	NA
WP_155321646.1\|1476547_1477768_-	MFS transporter	NA	NA	NA	NA
WP_155321647.1\|1477808_1478408_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_155321648.1\|1478716_1479883_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_173179130.1\|1481414_1483127_+	thrombospondin type 3 repeat-containing protein	E5ERA2	Bathycoccus_sp._RCC1105_virus	9.7e-62	41.1
WP_155321650.1\|1484129_1484537_-	hypothetical protein	NA	NA	NA	NA
WP_155321651.1\|1485242_1485947_+	single-stranded DNA-binding protein	L7TJL2	Pseudomonas_virus	3.2e-11	35.6
WP_155321652.1\|1486016_1486796_+	hypothetical protein	NA	NA	NA	NA
WP_173179132.1\|1486876_1487716_+	DUF932 domain-containing protein	NA	NA	NA	NA
WP_173179134.1\|1487867_1488386_+	JAB domain-containing protein	NA	NA	NA	NA
WP_155321655.1\|1488412_1488766_+	hypothetical protein	NA	NA	NA	NA
WP_173179136.1\|1489188_1490151_+\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_155321657.1\|1491000_1491153_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_155321658.1\|1491156_1491561_+	hypothetical protein	NA	NA	NA	NA
WP_155321659.1\|1491687_1491903_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_155321660.1\|1491899_1492325_+	PIN domain-containing protein	NA	NA	NA	NA
WP_155321661.1\|1492339_1492621_+	hypothetical protein	NA	NA	NA	NA
WP_155321662.1\|1492964_1494125_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_155321663.1\|1494185_1494689_+	hypothetical protein	NA	NA	NA	NA
WP_155321664.1\|1494728_1494950_+	hypothetical protein	NA	NA	NA	NA
WP_155321665.1\|1495129_1496170_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1496949:1496963	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1500889 : 1551406

Lactococcus_phage(16.67%)

transposase,integrase

attL 1499331:1499346|attR 1561181:1561196

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1499331:1499346	attL	NA	NA	NA	NA
WP_155320762.1\|1500889_1501900_+\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_155321672.1\|1502024_1502822_+	transglutaminase family protein	NA	NA	NA	NA
WP_155321673.1\|1503436_1503637_+	cold shock domain-containing protein	A0A1X9IGI9	Lactococcus_phage	1.4e-17	61.9
WP_155321674.1\|1503847_1504210_+	hypothetical protein	NA	NA	NA	NA
WP_155321675.1\|1506057_1507050_+	hypothetical protein	NA	NA	NA	NA
WP_155321676.1\|1507070_1508303_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.9e-53	33.2
WP_173179138.1\|1508772_1508925_+	hypothetical protein	NA	NA	NA	NA
WP_155321677.1\|1508956_1509298_+	hypothetical protein	NA	NA	NA	NA
WP_155320657.1\|1509468_1510437_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155321678.1\|1510528_1511380_+	transglutaminase family protein	NA	NA	NA	NA
WP_155321248.1\|1511896_1513015_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155321679.1\|1514250_1514490_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_155321680.1\|1514479_1514764_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_155321681.1\|1514973_1515261_-	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_155321682.1\|1515436_1516399_-	TSUP family transporter	NA	NA	NA	NA
WP_155321683.1\|1516426_1516915_-	hypothetical protein	NA	NA	NA	NA
WP_155320792.1\|1517079_1519242_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155321684.1\|1519175_1519832_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	6.9e-16	31.2
WP_155321685.1\|1519828_1520605_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_155321686.1\|1520601_1521471_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173179139.1\|1521791_1522376_+	excisionase family DNA-binding protein	NA	NA	NA	NA
WP_155321688.1\|1522422_1522686_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320792.1\|1522801_1524964_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155321689.1\|1525042_1525675_-	hypothetical protein	NA	NA	NA	NA
WP_155320764.1\|1525671_1526643_-	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320765.1\|1526633_1527449_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|1527445_1528831_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|1528924_1529722_-	hypothetical protein	NA	NA	NA	NA
WP_155321690.1\|1530811_1531048_+	hypothetical protein	NA	NA	NA	NA
WP_155321691.1\|1531347_1532385_+	hypothetical protein	NA	NA	NA	NA
WP_155321692.1\|1532482_1533253_-	hydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_155321693.1\|1533308_1536092_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA
WP_155321694.1\|1536392_1537331_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155321695.1\|1538069_1538321_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_155320855.1\|1538910_1540437_+\|transposase	transposase	NA	NA	NA	NA
WP_155321696.1\|1540682_1541027_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_173179141.1\|1541380_1543684_-	PAS domain S-box protein	NA	NA	NA	NA
WP_173179143.1\|1543650_1544673_-	cache domain-containing protein	NA	NA	NA	NA
WP_173179145.1\|1544783_1545497_-	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_155325937.1\|1545499_1545886_-	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_173179147.1\|1546193_1547243_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_173179149.1\|1547472_1548426_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	7.4e-19	26.9
WP_155321701.1\|1548403_1551406_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	7.0e-39	22.3
1561181:1561196	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1571641 : 1625934

Enterobacteria_phage(11.11%)

transposase,integrase

attL 1574354:1574368|attR 1621010:1621024

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321648.1\|1571641_1572808_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155321720.1\|1572880_1574185_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	4.4e-30	25.9
WP_155321721.1\|1574215_1574389_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
1574354:1574368	attL	NA	NA	NA	NA
WP_155320962.1\|1574462_1576367_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_155321703.1\|1576555_1576780_+	type II toxin-antitoxin system HicA family toxin	A0A0A7RWW9	Clostridium_phage	4.4e-07	48.3
WP_155321722.1\|1577182_1577548_-	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_155321723.1\|1577547_1577796_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_155321724.1\|1577813_1580786_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_155321725.1\|1580789_1581731_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJP1	Virus_Rctr41k	1.1e-17	29.0
WP_155320763.1\|1582468_1583404_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320764.1\|1583400_1584372_-	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320765.1\|1584362_1585178_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|1585174_1586560_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|1586653_1587451_-	hypothetical protein	NA	NA	NA	NA
WP_155321726.1\|1587698_1587971_-	hypothetical protein	NA	NA	NA	NA
WP_155321727.1\|1588233_1589103_-	hypothetical protein	NA	NA	NA	NA
WP_155321728.1\|1589208_1590885_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_155321729.1\|1590771_1592493_-	DGQHR domain-containing protein	NA	NA	NA	NA
WP_173179153.1\|1593506_1594211_+	single-stranded DNA-binding protein	L7TJL2	Pseudomonas_virus	8.4e-12	36.2
WP_173179155.1\|1594289_1595060_+	hypothetical protein	NA	NA	NA	NA
WP_173179132.1\|1595140_1595980_+	DUF932 domain-containing protein	NA	NA	NA	NA
WP_173179134.1\|1596131_1596650_+	JAB domain-containing protein	NA	NA	NA	NA
WP_155321655.1\|1596676_1597030_+	hypothetical protein	NA	NA	NA	NA
WP_173179157.1\|1597452_1597962_+\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_173179159.1\|1598554_1600468_+	hypothetical protein	A0A0U4J920	Pseudomonas_phage	2.1e-28	28.6
WP_173179161.1\|1600539_1600974_+\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_155320855.1\|1601248_1602775_+\|transposase	transposase	NA	NA	NA	NA
WP_155321735.1\|1603030_1604392_-	HD domain-containing protein	NA	NA	NA	NA
WP_155321736.1\|1604384_1605935_-	glycogen/starch synthase	NA	NA	NA	NA
WP_155321737.1\|1606020_1606413_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_054700164.1\|1606583_1606892_-	isoamylase early set domain-containing protein	NA	NA	NA	NA
WP_155321738.1\|1607022_1608213_-	phospholipase A	NA	NA	NA	NA
WP_155321739.1\|1608297_1609419_-	ABC transporter permease	NA	NA	NA	NA
WP_173180153.1\|1609421_1612166_-	ribosome-associated ATPase/putative transporter RbbA	A0A2H4PQG7	Staphylococcus_phage	4.6e-21	28.8
WP_155321741.1\|1612186_1613260_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155321742.1\|1613256_1613595_-	hypothetical protein	NA	NA	NA	NA
WP_155321743.1\|1613777_1614731_-	universal stress protein	NA	NA	NA	NA
WP_155321744.1\|1614799_1616206_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_155321745.1\|1616210_1619387_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_155321746.1\|1619386_1620730_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155321747.1\|1620832_1621411_-	hypothetical protein	NA	NA	NA	NA
1621010:1621024	attR	NA	NA	NA	NA
WP_155321748.1\|1621407_1621713_-	hypothetical protein	NA	NA	NA	NA
WP_155321749.1\|1621918_1623469_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155325939.1\|1623716_1624286_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.0e-28	37.5
WP_155321750.1\|1624449_1625934_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	3.8e-38	34.8

DBSCAN-SWA_10

1829367 : 1912269

Staphylococcus_phage(15.38%)

integrase,transposase,capsid,protease,head

attL 1820480:1820496|attR 1911275:1911290

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1820480:1820496	attL	NA	NA	NA	NA
WP_173179217.1\|1829367_1829565_+\|transposase	transposase	NA	NA	NA	NA
1820480:1820496	attL	NA	NA	NA	NA
WP_155321905.1\|1829595_1830711_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_083455770.1\|1830899_1831076_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_155321906.1\|1831324_1832137_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_155321907.1\|1832133_1832955_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	3.6e-30	39.0
WP_173179219.1\|1832948_1833971_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173179221.1\|1833967_1835023_+	hypothetical protein	NA	NA	NA	NA
WP_155321910.1\|1835135_1835579_-	hypothetical protein	NA	NA	NA	NA
WP_155321911.1\|1835575_1836460_-	DUF4338 domain-containing protein	NA	NA	NA	NA
WP_155321912.1\|1836501_1836858_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_155321913.1\|1836854_1837262_-	hypothetical protein	NA	NA	NA	NA
WP_155321914.1\|1837468_1838263_-	S-methyl-5'-thioadenosine phosphorylase	NA	NA	NA	NA
WP_155321915.1\|1838743_1838950_+	hypothetical protein	NA	NA	NA	NA
WP_155321916.1\|1838985_1840120_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.7e-22	29.2
WP_155320792.1\|1840398_1842561_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_173179223.1\|1843400_1843559_-	hypothetical protein	NA	NA	NA	NA
WP_173179225.1\|1844421_1844934_-	DUF4277 domain-containing protein	NA	NA	NA	NA
WP_155321918.1\|1845298_1845538_-	hypothetical protein	NA	NA	NA	NA
WP_155321919.1\|1846100_1846670_+	DNA methylase	NA	NA	NA	NA
WP_155321920.1\|1846656_1848336_+\|integrase	integrase	NA	NA	NA	NA
WP_155321921.1\|1848311_1848980_+	ATP-binding protein	NA	NA	NA	NA
WP_155321922.1\|1849645_1851226_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	2.6e-29	31.6
WP_155321923.1\|1851268_1852825_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.2e-34	25.6
WP_155321924.1\|1854091_1854901_-	ATPase	NA	NA	NA	NA
WP_155321925.1\|1854922_1855882_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_155321926.1\|1855902_1856346_-	amino acid-binding protein	NA	NA	NA	NA
WP_155321927.1\|1856504_1856936_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	8.5e-15	34.7
WP_155321928.1\|1857571_1859191_+	sodium/solute symporter	NA	NA	NA	NA
WP_155321929.1\|1859292_1861101_+	indolepyruvate ferredoxin oxidoreductase subunit alpha	NA	NA	NA	NA
WP_155321930.1\|1861127_1861718_+	indolepyruvate oxidoreductase subunit beta	NA	NA	NA	NA
WP_155321752.1\|1862489_1862939_+	hypothetical protein	NA	NA	NA	NA
WP_155321751.1\|1863014_1863395_+	hypothetical protein	NA	NA	NA	NA
WP_155321750.1\|1863396_1864881_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	3.8e-38	34.8
WP_173179227.1\|1864933_1865380_+	ATP-binding protein	NA	NA	NA	NA
WP_173179229.1\|1865526_1866771_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155321933.1\|1866767_1867763_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.5e-06	28.3
1867587:1867603	attR	NA	NA	NA	NA
WP_155321934.1\|1867759_1868485_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1867587:1867603	attR	NA	NA	NA	NA
WP_155325953.1\|1868521_1868779_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155321935.1\|1869461_1870565_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_155321936.1\|1870809_1871028_-	hypothetical protein	NA	NA	NA	NA
WP_155321937.1\|1871008_1871287_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_155321938.1\|1871357_1872158_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_173179231.1\|1872161_1872644_-	TolC family protein	NA	NA	NA	NA
WP_155321844.1\|1872699_1873746_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	3.0e-05	23.0
WP_155321845.1\|1873749_1874103_+	hypothetical protein	NA	NA	NA	NA
WP_155321846.1\|1874219_1875608_+	hypothetical protein	NA	NA	NA	NA
WP_155321940.1\|1875641_1876601_-	DUF1302 family protein	NA	NA	NA	NA
WP_155321941.1\|1877219_1878026_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_155321942.1\|1878070_1879258_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_155325954.1\|1879869_1880817_+	amidohydrolase family protein	NA	NA	NA	NA
WP_155321921.1\|1882717_1883386_-	ATP-binding protein	NA	NA	NA	NA
WP_155321920.1\|1883361_1885041_-\|integrase	integrase	NA	NA	NA	NA
WP_155321919.1\|1885027_1885597_-	DNA methylase	NA	NA	NA	NA
WP_155321918.1\|1886159_1886399_+	hypothetical protein	NA	NA	NA	NA
WP_155321943.1\|1886756_1887170_-	OB-fold domain-containing protein	NA	NA	NA	NA
WP_155321944.1\|1887166_1888348_-	hypothetical protein	NA	NA	NA	NA
WP_155321945.1\|1888669_1889860_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_155321946.1\|1890328_1891492_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_173179234.1\|1891639_1893646_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_155321948.1\|1893911_1894310_+	universal stress protein	NA	NA	NA	NA
WP_155321949.1\|1894724_1895501_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_155321250.1\|1896616_1897057_+	hypothetical protein	NA	NA	NA	NA
WP_155321251.1\|1897159_1898434_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_155325906.1\|1898430_1899240_+	AAA family ATPase	NA	NA	NA	NA
WP_155321950.1\|1900155_1900719_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155321951.1\|1901124_1901307_+	hypothetical protein	NA	NA	NA	NA
WP_155321952.1\|1901293_1902328_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	1.9e-20	34.1
WP_155321953.1\|1902764_1903319_+	hypothetical protein	NA	NA	NA	NA
WP_155309537.1\|1903375_1903738_+	hypothetical protein	NA	NA	NA	NA
WP_155321954.1\|1903742_1904102_+	transcriptional regulator	NA	NA	NA	NA
WP_155321955.1\|1904994_1906317_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155321956.1\|1906313_1906952_+	hypothetical protein	NA	NA	NA	NA
WP_155321957.1\|1907052_1907247_+	monooxygenase	NA	NA	NA	NA
WP_155321958.1\|1907249_1907486_+	hypothetical protein	NA	NA	NA	NA
WP_155321959.1\|1907513_1909688_+	hypothetical protein	A0A2H4JF22	uncultured_Caudovirales_phage	1.8e-12	35.2
WP_155321960.1\|1909687_1910113_+	HNH endonuclease	A8B112	Xanthomonas_virus	6.2e-10	42.3
WP_155321961.1\|1910356_1910971_+\|head,protease	HK97 family phage prohead protease	Q8LTC1	Lactobacillus_phage	1.4e-26	46.0
WP_155321962.1\|1910973_1912269_+\|capsid	phage major capsid protein	A0A142K632	Streptomyces_phage	4.0e-84	41.7

DBSCAN-SWA_11

1957231 : 1985318

Burkholderia_phage(33.33%)

transposase,integrase

attL 1966918:1966977|attR 1990929:1992353

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321993.1\|1957231_1958218_-\|transposase	transposase	NA	NA	NA	NA
WP_155325956.1\|1959649_1959922_+	hypothetical protein	NA	NA	NA	NA
WP_155321994.1\|1960080_1960452_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_155321995.1\|1960402_1960792_-	HEPN domain-containing protein	NA	NA	NA	NA
WP_155321996.1\|1960876_1961128_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_155321997.1\|1961625_1961880_+	hypothetical protein	NA	NA	NA	NA
WP_155321998.1\|1961873_1962218_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_155321999.1\|1962374_1964054_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_155322000.1\|1964064_1964931_+	DUF4338 domain-containing protein	NA	NA	NA	NA
WP_155322001.1\|1965685_1965958_+	toxin	NA	NA	NA	NA
WP_155322002.1\|1965954_1966254_+	antitoxin	NA	NA	NA	NA
WP_155322003.1\|1966575_1966941_+	DUF4338 domain-containing protein	NA	NA	NA	NA
1966918:1966977	attL	NA	NA	NA	NA
WP_155321603.1\|1967028_1968339_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.5e-35	28.0
WP_173179249.1\|1968393_1970169_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155322005.1\|1970313_1971249_-	hypothetical protein	NA	NA	NA	NA
WP_155322006.1\|1971373_1971670_-	DUF2442 domain-containing protein	NA	NA	NA	NA
WP_155322007.1\|1971697_1972144_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_173179251.1\|1972136_1972562_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_155322009.1\|1972784_1973033_+	hypothetical protein	NA	NA	NA	NA
WP_173180155.1\|1973028_1973364_+	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	4.3e-06	30.8
WP_173178944.1\|1973418_1973631_-	hypothetical protein	NA	NA	NA	NA
WP_155322012.1\|1973923_1974232_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_155322013.1\|1974224_1974605_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_155314172.1\|1975407_1975632_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_155322014.1\|1975624_1975870_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_155325957.1\|1976062_1976278_+	type II toxin-antitoxin system YoeB family toxin	NA	NA	NA	NA
WP_155322015.1\|1976621_1977296_+	HEPN domain-containing protein	NA	NA	NA	NA
WP_155320860.1\|1977579_1977753_-	hypothetical protein	NA	NA	NA	NA
WP_173179000.1\|1977774_1978593_-	AAA family ATPase	NA	NA	NA	NA
WP_155322017.1\|1978579_1979038_-	hypothetical protein	NA	NA	NA	NA
WP_155320767.1\|1979364_1980162_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|1980255_1981641_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|1981637_1982453_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|1982443_1983415_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320763.1\|1983411_1984347_+	toprim domain-containing protein	NA	NA	NA	NA
WP_155322018.1\|1984529_1985318_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
1990929:1992353	attR	NA	NA	NA	NA

DBSCAN-SWA_12

1989566 : 2031201

Brucella_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321603.1\|1989566_1990877_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.5e-35	28.0
WP_155322023.1\|1990914_1991916_-\|transposase	transposase	NA	NA	NA	NA
WP_155322024.1\|1992342_1993275_-\|transposase	transposase	NA	NA	NA	NA
WP_155325958.1\|1993309_1993564_+	ATP-binding protein	NA	NA	NA	NA
WP_173179253.1\|1993556_1993802_+	ATP-binding protein	NA	NA	NA	NA
WP_155322019.1\|1994433_1994733_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	3.1e-16	42.6
WP_155322020.1\|1994736_1995009_+	putative addiction module antidote protein	A0A141GEX5	Brucella_phage	3.1e-15	49.4
WP_155322026.1\|1995174_1995510_+	HEPN domain-containing protein	NA	NA	NA	NA
WP_155322027.1\|1995479_1995788_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_155322028.1\|1996616_1998065_-	DUF362 domain-containing protein	NA	NA	NA	NA
WP_155322029.1\|1998042_1998441_-	GtrA family protein	NA	NA	NA	NA
WP_155322030.1\|1998458_1999208_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_155325959.1\|1999204_2000554_-	FAD-binding protein	NA	NA	NA	NA
WP_155322031.1\|2000572_2002009_-	UbiA family prenyltransferase	NA	NA	NA	NA
WP_173179255.1\|2002154_2003258_-	acyltransferase	NA	NA	NA	NA
WP_155322033.1\|2003656_2005348_-	hypothetical protein	NA	NA	NA	NA
WP_155322034.1\|2005508_2005937_-	VOC family protein	NA	NA	NA	NA
WP_155322035.1\|2005984_2006575_-	acyltransferase	NA	NA	NA	NA
WP_155322036.1\|2006973_2008419_-	hypothetical protein	NA	NA	NA	NA
WP_155322037.1\|2008781_2010083_+	hypothetical protein	NA	NA	NA	NA
WP_155322038.1\|2010418_2011225_-\|transposase	transposase	NA	NA	NA	NA
WP_155322039.1\|2011577_2012438_-	hypothetical protein	NA	NA	NA	NA
WP_155322040.1\|2012437_2013460_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_155322041.1\|2013477_2013960_-	hypothetical protein	NA	NA	NA	NA
WP_155322042.1\|2013956_2014433_-	hypothetical protein	NA	NA	NA	NA
WP_155322043.1\|2016817_2017663_-	glycosyltransferase	NA	NA	NA	NA
WP_155322044.1\|2017696_2018653_-	glycosyltransferase	NA	NA	NA	NA
WP_155322045.1\|2018671_2019847_-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain	NA	NA	NA	NA
WP_155322046.1\|2020454_2020940_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155325960.1\|2021765_2023253_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_155322048.1\|2023464_2024796_-	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_155322049.1\|2024788_2025382_-	hypothetical protein	NA	NA	NA	NA
WP_155322050.1\|2025590_2026199_-	antibiotic acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	4.9e-24	35.4
WP_155322051.1\|2026272_2027277_-	glycosyltransferase	A0A1V0SAH6	Catovirus	9.2e-12	32.0
WP_155322052.1\|2027291_2028752_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_155322053.1\|2028803_2029937_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_173179257.1\|2030051_2030399_-	exosortase-associated EpsI family protein	NA	NA	NA	NA
WP_155322054.1\|2030376_2031201_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

2114138 : 2125006

uncultured_Mediterranean_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325964.1\|2114138_2116868_+	CBS domain-containing protein	R4T733	Halovirus	2.1e-10	29.9
WP_155309931.1\|2117006_2117765_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.5e-11	23.5
WP_155322121.1\|2117765_2118404_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.6e-23	41.0
WP_155322122.1\|2118524_2119247_+	mobilization protein	A0A1X9SH03	Bradyrhizobium_phage	1.7e-12	25.2
WP_155322123.1\|2120242_2120710_-	hypothetical protein	NA	NA	NA	NA
WP_155322124.1\|2120710_2121001_-	hypothetical protein	A0A2N9QVZ6	Dishui_lake_phycodnavirus	9.1e-05	33.7
WP_155322125.1\|2121337_2122630_-	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	4.1e-73	37.0
WP_155322126.1\|2122692_2123157_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	4.4e-09	40.3
WP_173179271.1\|2123320_2124268_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155322128.1\|2124271_2125006_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.3e-20	34.8

DBSCAN-SWA_14

2250739 : 2295564

Streptococcus_phage(20.0%)

transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155322198.1\|2250739_2251780_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_155322199.1\|2251743_2253549_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_155322200.1\|2253554_2254019_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_155322201.1\|2254038_2254521_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_155322202.1\|2254644_2256135_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_155322203.1\|2256219_2256729_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_155322204.1\|2256821_2258129_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_155322205.1\|2258125_2258944_-	hypothetical protein	NA	NA	NA	NA
WP_155310047.1\|2259128_2259884_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_155322206.1\|2259868_2263357_-	type VI secretion system protein ImpL	NA	NA	NA	NA
WP_155322207.1\|2263353_2264034_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_155322208.1\|2264036_2265422_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_155310051.1\|2265427_2265976_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_155322209.1\|2265986_2266715_-	hypothetical protein	NA	NA	NA	NA
WP_155322210.1\|2266723_2269357_-	hypothetical protein	NA	NA	NA	NA
WP_155322211.1\|2269569_2269770_-	hypothetical protein	NA	NA	NA	NA
WP_155322212.1\|2269772_2271056_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_155325969.1\|2271336_2272038_-	AAA family ATPase	NA	NA	NA	NA
WP_155322213.1\|2272186_2274274_-	elongation factor G	E4ZFJ7	Streptococcus_phage	2.0e-48	26.8
WP_155322214.1\|2274702_2276796_+	PAS domain S-box protein	W8CYM9	Bacillus_phage	7.1e-06	32.1
WP_155310059.1\|2276868_2277279_-	hypothetical protein	NA	NA	NA	NA
WP_155310060.1\|2277395_2278976_+	methylenetetrahydrofolate reductase C-terminal domain-containing protein	NA	NA	NA	NA
WP_155310061.1\|2278972_2279284_+	MTH1187 family thiamine-binding protein	NA	NA	NA	NA
WP_155310062.1\|2279481_2279700_-	hypothetical protein	NA	NA	NA	NA
WP_155322215.1\|2279947_2281354_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_155322216.1\|2281696_2282188_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_155322217.1\|2282384_2283584_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.1e-30	27.2
WP_155322218.1\|2283629_2284547_+	ornithine carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	1.6e-18	27.7
WP_155310067.1\|2284665_2285613_+	carbamate kinase	NA	NA	NA	NA
WP_155322219.1\|2285701_2286637_+	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	3.5e-74	49.8
WP_173179291.1\|2286964_2290576_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_155322221.1\|2290720_2291875_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_173179293.1\|2292133_2293192_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_155322223.1\|2293209_2294130_-	hypothetical protein	NA	NA	NA	NA
WP_173179295.1\|2294253_2295564_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

2303107 : 2332800

Brucella_phage(40.0%)

transposase,integrase

attL 2329557:2329571|attR 2338174:2338188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155322230.1\|2303107_2303902_-\|transposase	transposase	NA	NA	NA	NA
WP_155322231.1\|2304924_2308137_-	hypothetical protein	NA	NA	NA	NA
WP_155313818.1\|2308349_2308676_-	putative addiction module antidote protein	A0A141GEX5	Brucella_phage	1.3e-12	47.1
WP_155313817.1\|2308685_2308976_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	1.9e-26	58.3
WP_155322232.1\|2309137_2310034_-	hypothetical protein	NA	NA	NA	NA
WP_155322233.1\|2310197_2311145_-	radical SAM protein	NA	NA	NA	NA
WP_155321248.1\|2311735_2312854_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155322234.1\|2313275_2313740_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_155320857.1\|2314193_2314700_+	hypothetical protein	NA	NA	NA	NA
WP_155320858.1\|2314777_2316022_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_173179000.1\|2316008_2316827_+	AAA family ATPase	NA	NA	NA	NA
WP_155320860.1\|2316848_2317022_+	hypothetical protein	NA	NA	NA	NA
WP_155322235.1\|2317215_2318016_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_155314093.1\|2318267_2318540_-	hypothetical protein	NA	NA	NA	NA
WP_155322236.1\|2319592_2320216_-	hypothetical protein	NA	NA	NA	NA
WP_155325971.1\|2320343_2320583_-	hypothetical protein	NA	NA	NA	NA
WP_155322237.1\|2320668_2321106_-	hypothetical protein	NA	NA	NA	NA
WP_155322238.1\|2321805_2322210_-\|transposase	IS200/IS605 family transposase	W0UUZ0	Sulfolobus_monocaudavirus	2.9e-17	35.9
WP_155322239.1\|2322325_2322598_-	hypothetical protein	NA	NA	NA	NA
WP_155322240.1\|2323040_2323790_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_155322241.1\|2323779_2324433_-	hypothetical protein	NA	NA	NA	NA
WP_155322242.1\|2324583_2326848_-	hypothetical protein	NA	NA	NA	NA
WP_155322230.1\|2327010_2327805_-\|transposase	transposase	NA	NA	NA	NA
WP_155322243.1\|2327951_2329217_-	TIR domain-containing protein	NA	NA	NA	NA
WP_155322244.1\|2329219_2329720_-	hypothetical protein	NA	NA	NA	NA
2329557:2329571	attL	NA	NA	NA	NA
WP_155322245.1\|2329911_2330256_-	hypothetical protein	NA	NA	NA	NA
WP_155313729.1\|2331918_2332800_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-22	28.3
2338174:2338188	attR	NA	NA	NA	NA

DBSCAN-SWA_16

2501503 : 2566382

Klosneuvirus(13.33%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325982.1\|2501503_2502307_-\|transposase	transposase	NA	NA	NA	NA
WP_155322354.1\|2502721_2503378_-	hypothetical protein	NA	NA	NA	NA
WP_155322355.1\|2504258_2505911_-	hypothetical protein	R9TRQ8	Vibrio_phage	4.9e-10	23.5
WP_155322356.1\|2505925_2507848_-	hypothetical protein	NA	NA	NA	NA
WP_155322357.1\|2508113_2508368_-\|transposase	transposase	NA	NA	NA	NA
WP_155325983.1\|2508451_2509036_-	hypothetical protein	NA	NA	NA	NA
WP_155322358.1\|2511145_2511709_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_155322359.1\|2511774_2512419_-	fructose-6-phosphate aldolase	R9TM64	Synechococcus_phage	2.5e-50	49.5
WP_155310233.1\|2512535_2512796_-	YHS domain-containing protein	NA	NA	NA	NA
WP_155322360.1\|2512792_2513335_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_155322361.1\|2513322_2514150_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_155322362.1\|2514152_2514653_-	hypothetical protein	NA	NA	NA	NA
WP_155322363.1\|2514656_2516048_-	argininosuccinate lyase	NA	NA	NA	NA
WP_155322364.1\|2516056_2517265_-	argininosuccinate synthase	NA	NA	NA	NA
WP_155322365.1\|2517291_2518476_-	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	4.3e-32	28.7
WP_155322366.1\|2518561_2519458_-	acetylglutamate kinase	NA	NA	NA	NA
WP_155322367.1\|2519567_2520935_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	2.2e-40	27.8
WP_155322368.1\|2520927_2521497_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_155322369.1\|2521529_2522459_-	tyrosine recombinase	A0A2K9VF00	Mycobacterium_phage	5.2e-17	32.6
WP_155310244.1\|2522455_2523064_-	haloacid dehalogenase	NA	NA	NA	NA
WP_155310245.1\|2523172_2523925_-	SPFH domain-containing protein	A0A2K9KZA2	Tupanvirus	3.9e-31	34.6
WP_155322370.1\|2523935_2525231_-	nodulation protein NfeD	NA	NA	NA	NA
WP_155325984.1\|2525276_2526059_-	uracil-DNA glycosylase	NA	NA	NA	NA
WP_155322371.1\|2526063_2527314_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.8e-41	33.2
WP_155322372.1\|2527343_2527631_-	hypothetical protein	NA	NA	NA	NA
WP_173179315.1\|2527632_2527932_-	septum formation initiator family protein	NA	NA	NA	NA
WP_155322374.1\|2527928_2529536_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_155310252.1\|2529645_2529909_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_162458875.1\|2529992_2530508_-	LptE family protein	NA	NA	NA	NA
WP_155322375.1\|2530524_2533122_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	7.3e-202	44.4
WP_155322376.1\|2533357_2534857_+	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_155322377.1\|2535006_2535369_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_155322378.1\|2535516_2537094_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_155322379.1\|2537149_2538184_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.5e-44	37.2
WP_155322380.1\|2538184_2539348_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	5.6e-29	41.0
WP_155322381.1\|2539340_2541632_+	type I DNA topoisomerase	E3T4K4	Cafeteria_roenbergensis_virus	6.2e-96	38.7
WP_155325985.1\|2541887_2544152_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_155322382.1\|2544164_2544605_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_155310262.1\|2544688_2545477_-	hypothetical protein	NA	NA	NA	NA
WP_155322383.1\|2545799_2547359_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155322384.1\|2547513_2548884_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155322385.1\|2549143_2550529_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_155322386.1\|2550999_2551962_+	P-loop NTPase	NA	NA	NA	NA
WP_155322387.1\|2552115_2553567_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	8.8e-56	30.5
WP_155322388.1\|2553643_2554885_-	CinA family nicotinamide mononucleotide deamidase-related protein	B5TK85	Pseudomonas_phage	1.5e-16	46.4
WP_155322389.1\|2555354_2557172_+	Hsp70 family protein	NA	NA	NA	NA
WP_155325986.1\|2557208_2560022_+	Hsp70 family protein	A0A1V0SI81	Klosneuvirus	1.6e-08	22.7
WP_155322390.1\|2560149_2560290_+	hypothetical protein	NA	NA	NA	NA
WP_155322391.1\|2560519_2560786_+	hypothetical protein	NA	NA	NA	NA
WP_155322392.1\|2561127_2561502_+	hypothetical protein	NA	NA	NA	NA
WP_155320855.1\|2561817_2563344_-\|transposase	transposase	NA	NA	NA	NA
WP_155322393.1\|2563718_2564585_-	DUF4338 domain-containing protein	NA	NA	NA	NA
WP_155321603.1\|2565071_2566382_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.5e-35	28.0

DBSCAN-SWA_17

3102663 : 3165162

Feldmannia_irregularis_virus(20.0%)

tail,protease,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155322727.1\|3102663_3103590_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_155322728.1\|3103997_3104999_+	hypothetical protein	NA	NA	NA	NA
WP_155322729.1\|3105003_3105921_+	hypothetical protein	NA	NA	NA	NA
WP_155322730.1\|3106061_3106655_-\|protease	archaemetzincin family Zn-dependent metalloprotease	NA	NA	NA	NA
WP_155322731.1\|3106651_3107995_-	sigma 54-interacting transcriptional regulator	Q6XM27	Feldmannia_irregularis_virus	1.0e-05	27.9
WP_155322732.1\|3108189_3109749_-	PAS domain-containing protein	NA	NA	NA	NA
WP_155322733.1\|3110317_3114757_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_173179403.1\|3114815_3115016_+	hydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_173180157.1\|3115037_3115247_+	hydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_155310630.1\|3115248_3116196_+	4Fe-4S ferredoxin	NA	NA	NA	NA
WP_155322734.1\|3116298_3117363_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155322735.1\|3117536_3118382_+	heterodisulfide reductase subunit F	NA	NA	NA	NA
WP_155310633.1\|3118522_3118840_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_155310634.1\|3119096_3119489_+	YjbQ family protein	NA	NA	NA	NA
WP_155326006.1\|3119488_3120328_+	nitrilase	NA	NA	NA	NA
WP_155310635.1\|3120482_3121163_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_155322736.1\|3121159_3121807_-	DUF4276 family protein	NA	NA	NA	NA
WP_155322737.1\|3121797_3123312_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	5.5e-08	20.8
WP_155322738.1\|3123550_3126721_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_155322739.1\|3126713_3127976_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155322740.1\|3127982_3129410_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_155314230.1\|3129804_3130035_+	KH domain-containing protein	NA	NA	NA	NA
WP_173179405.1\|3130333_3131539_-	TIGR03790 family protein	NA	NA	NA	NA
WP_173179407.1\|3131947_3133390_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_155322743.1\|3133405_3134875_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_155322744.1\|3134889_3135654_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_155322745.1\|3135646_3136873_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_155322746.1\|3136865_3137597_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_155322747.1\|3137595_3137775_+	hypothetical protein	NA	NA	NA	NA
WP_155322748.1\|3137875_3138223_-	DNA-binding protein	NA	NA	NA	NA
WP_155326007.1\|3138203_3138500_-	hypothetical protein	NA	NA	NA	NA
WP_173179409.1\|3138899_3139505_-	GerMN domain-containing protein	NA	NA	NA	NA
WP_155322750.1\|3139519_3140206_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_155322751.1\|3140324_3142250_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_155322752.1\|3142349_3145106_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_155322753.1\|3145163_3148028_-	hypothetical protein	NA	NA	NA	NA
WP_155322754.1\|3148066_3150130_-	hypothetical protein	NA	NA	NA	NA
WP_155322755.1\|3150163_3153538_-\|plate	baseplate J/gp47 family protein	NA	NA	NA	NA
WP_155322756.1\|3153534_3154701_-	hypothetical protein	NA	NA	NA	NA
WP_155322757.1\|3154713_3155091_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_155322758.1\|3155121_3155934_-\|tail	phage tail protein	A0A1D8EXK2	Campylobacter_phage	1.6e-09	29.4
WP_155322759.1\|3155979_3157119_-	hypothetical protein	NA	NA	NA	NA
WP_155322760.1\|3157119_3157410_-	hypothetical protein	NA	NA	NA	NA
WP_155322761.1\|3157410_3158049_-	hypothetical protein	NA	NA	NA	NA
WP_155322762.1\|3158078_3158357_-	hypothetical protein	NA	NA	NA	NA
WP_155322763.1\|3158350_3159688_-	AAA family ATPase	A0A2D2W2A9	Stenotrophomonas_phage	1.2e-11	38.2
WP_155322764.1\|3159684_3160716_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_155322765.1\|3160719_3161316_-	hypothetical protein	NA	NA	NA	NA
WP_155322766.1\|3161415_3161778_+	hypothetical protein	NA	NA	NA	NA
WP_155322767.1\|3161896_3162721_-	hypothetical protein	NA	NA	NA	NA
WP_155310666.1\|3162720_3163230_-\|tail	phage tail protein	NA	NA	NA	NA
WP_155322768.1\|3163242_3165162_-\|tail	phage tail sheath subtilisin-like domain-containing protein	D5GV45	Campylobacter_virus	3.2e-05	29.1

DBSCAN-SWA_18

3455459 : 3507783

Virus_Rctr41k(25.0%)

transposase,integrase,tRNA

attL 3476232:3476246|attR 3497160:3497174

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155322957.1\|3455459_3456899_-\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_155326030.1\|3457531_3458539_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_155322958.1\|3458541_3459408_+	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	5.5e-05	24.4
WP_173179471.1\|3459385_3460384_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155322960.1\|3460379_3461774_+	cobyrinate a,c-diamide synthase	NA	NA	NA	NA
WP_155322961.1\|3461798_3462419_+	precorrin-8X methylmutase	NA	NA	NA	NA
WP_155322962.1\|3462547_3463273_+	precorrin-2 C(20)-methyltransferase	NA	NA	NA	NA
WP_155312818.1\|3463375_3464422_-	GAF domain-containing protein	NA	NA	NA	NA
WP_155312817.1\|3464446_3465700_-	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC	NA	NA	NA	NA
WP_155322963.1\|3465703_3466600_-	hypothetical protein	NA	NA	NA	NA
WP_155322964.1\|3469408_3470419_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA
WP_155312815.1\|3470490_3471171_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_155322965.1\|3471193_3473425_-	response regulator	NA	NA	NA	NA
WP_155314400.1\|3473726_3474059_+	HIT domain-containing protein	D7NW73	Streptomyces_phage	6.1e-29	51.8
WP_155322966.1\|3474293_3476057_+	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	4.2e-60	35.7
3476232:3476246	attL	NA	NA	NA	NA
WP_155322967.1\|3476324_3479396_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	4.2e-07	23.2
WP_155322968.1\|3479392_3480055_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155326031.1\|3480087_3481098_-	transglutaminase	NA	NA	NA	NA
WP_155322969.1\|3481356_3482103_+	hypothetical protein	NA	NA	NA	NA
WP_162459123.1\|3482122_3482941_+	nitroreductase family protein	NA	NA	NA	NA
WP_155312809.1\|3482976_3483819_-	polyphosphate kinase 2	NA	NA	NA	NA
WP_155322970.1\|3483815_3485783_-	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA
WP_155322971.1\|3486424_3487048_-	repressor LexA	E5DV74	Deep-sea_thermophilic_phage	7.2e-15	36.8
WP_155322972.1\|3487181_3488225_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	3.8e-61	41.1
WP_155322973.1\|3488505_3488748_-	hypothetical protein	NA	NA	NA	NA
WP_155313729.1\|3489033_3489915_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-22	28.3
WP_155320749.1\|3491600_3491813_+	hypothetical protein	NA	NA	NA	NA
WP_155320750.1\|3491809_3493000_+\|transposase	transposase	NA	NA	NA	NA
WP_155322974.1\|3492996_3493224_+	hypothetical protein	NA	NA	NA	NA
WP_155322975.1\|3493387_3493654_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2P1N333	Gordonia_phage	9.9e-14	45.8
WP_155322976.1\|3493650_3493902_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_155321404.1\|3494094_3495435_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_155308510.1\|3496171_3496384_+	hypothetical protein	NA	NA	NA	NA
WP_162458720.1\|3496380_3497571_+\|transposase	transposase	NA	NA	NA	NA
3497160:3497174	attR	NA	NA	NA	NA
WP_155308512.1\|3497567_3497795_+	hypothetical protein	NA	NA	NA	NA
WP_173179473.1\|3497863_3498451_-	hypothetical protein	NA	NA	NA	NA
WP_155308510.1\|3499187_3499400_+	hypothetical protein	NA	NA	NA	NA
WP_162458720.1\|3499396_3500587_+\|transposase	transposase	NA	NA	NA	NA
WP_155308512.1\|3500583_3500811_+	hypothetical protein	NA	NA	NA	NA
WP_155321404.1\|3500911_3502252_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_155321404.1\|3502990_3504331_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_155326033.1\|3505069_3506359_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_155314210.1\|3506412_3507783_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

4186195 : 4241281

Pseudomonas_phage(16.67%)

transposase,protease,integrase

attL 4192870:4192884|attR 4199856:4199870

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155323387.1\|4186195_4187353_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155323388.1\|4187624_4187747_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_155323389.1\|4188524_4189964_+	radical SAM protein	NA	NA	NA	NA
WP_155323390.1\|4189932_4190766_+	amidohydrolase family protein	NA	NA	NA	NA
WP_155323391.1\|4191246_4191696_-\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_173179570.1\|4191695_4193666_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	2.8e-28	28.3
4192870:4192884	attL	NA	NA	NA	NA
WP_155323393.1\|4194258_4194768_-\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_155323394.1\|4195203_4195548_-	hypothetical protein	NA	NA	NA	NA
WP_173179572.1\|4195544_4196087_-	JAB domain-containing protein	NA	NA	NA	NA
WP_173179574.1\|4196243_4197044_-	DUF932 domain-containing protein	NA	NA	NA	NA
WP_155323397.1\|4197163_4197943_-	hypothetical protein	NA	NA	NA	NA
WP_155323398.1\|4198012_4198717_-	single-stranded DNA-binding protein	L7TJL2	Pseudomonas_virus	2.9e-12	37.6
WP_155323399.1\|4199447_4199855_+	hypothetical protein	NA	NA	NA	NA
WP_155323400.1\|4199959_4200193_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
4199856:4199870	attR	NA	NA	NA	NA
WP_155323401.1\|4200638_4200962_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155323402.1\|4201580_4201877_-	hypothetical protein	NA	NA	NA	NA
WP_155323403.1\|4202274_4202691_-	hypothetical protein	NA	NA	NA	NA
WP_155323404.1\|4203009_4203144_-	HU family DNA-binding protein	NA	NA	NA	NA
WP_155323405.1\|4203238_4203514_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	4.0e-10	40.4
WP_155323406.1\|4204466_4205318_-	transglutaminase family protein	NA	NA	NA	NA
WP_155326059.1\|4205401_4206094_-	hemolysin III family protein	NA	NA	NA	NA
WP_155323407.1\|4206193_4206571_-	hypothetical protein	NA	NA	NA	NA
WP_155323408.1\|4206682_4208047_-	lysine 2,3-aminomutase	NA	NA	NA	NA
WP_155323409.1\|4208383_4208746_-	hypothetical protein	NA	NA	NA	NA
WP_155323410.1\|4208933_4209134_-	cold shock domain-containing protein	A0A1X9IGI9	Lactococcus_phage	2.5e-17	60.3
WP_173179576.1\|4209557_4210028_-	hypothetical protein	NA	NA	NA	NA
WP_173179578.1\|4211427_4213134_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_155323413.1\|4213229_4214711_-	glycosidase	NA	NA	NA	NA
WP_173180171.1\|4214891_4215827_-	glycosidase	NA	NA	NA	NA
WP_155323415.1\|4215829_4216849_-	glycosyltransferase	NA	NA	NA	NA
WP_155323416.1\|4216861_4219168_-	glycosyltransferase	NA	NA	NA	NA
WP_155323417.1\|4219177_4219423_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_155323418.1\|4219576_4219900_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_155323419.1\|4219934_4220165_-	KH domain-containing protein	NA	NA	NA	NA
WP_155323420.1\|4220438_4221920_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155326060.1\|4222153_4223176_-	AAA family ATPase	R4TQL5	Phaeocystis_globosa_virus	1.8e-18	32.4
WP_155323421.1\|4223507_4223750_-	hypothetical protein	NA	NA	NA	NA
WP_173179580.1\|4224025_4224142_-	hypothetical protein	NA	NA	NA	NA
WP_155326062.1\|4224524_4224827_-	hypothetical protein	NA	NA	NA	NA
WP_155323422.1\|4225324_4225609_-	CoA-binding protein	NA	NA	NA	NA
WP_173179582.1\|4225577_4226777_-	diguanylate cyclase	NA	NA	NA	NA
WP_155323424.1\|4226692_4227157_-	response regulator	NA	NA	NA	NA
WP_155323425.1\|4227909_4229091_+\|transposase	ISAzo13 family transposase	NA	NA	NA	NA
WP_173179584.1\|4229110_4229572_-	response regulator	NA	NA	NA	NA
WP_173179586.1\|4229712_4230864_-	hypothetical protein	NA	NA	NA	NA
WP_155323428.1\|4230844_4233868_-	PAS domain-containing protein	NA	NA	NA	NA
WP_155323429.1\|4234055_4234283_-	YHS domain-containing protein	NA	NA	NA	NA
WP_155323430.1\|4234367_4235633_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155323431.1\|4235661_4236837_-	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_155323432.1\|4236833_4238786_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5ESM9	Bathycoccus_sp._RCC1105_virus	1.5e-111	42.3
WP_155323433.1\|4238813_4239104_-	hypothetical protein	NA	NA	NA	NA
WP_155323434.1\|4239257_4240235_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_155323435.1\|4240231_4241281_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA

DBSCAN-SWA_20

4296093 : 4426655

116

uncultured_Caudovirales_phage(12.5%)

transposase,integrase,protease

attL 4404650:4404709|attR 4408440:4410085

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155323482.1\|4296093_4297917_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5ESM9	Bathycoccus_sp._RCC1105_virus	9.2e-111	45.9
WP_155321248.1\|4298126_4299245_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155323483.1\|4299840_4300119_-	hypothetical protein	NA	NA	NA	NA
WP_155323484.1\|4300272_4301250_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_155323485.1\|4301246_4302296_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_155323486.1\|4302390_4303869_-	DUF4070 domain-containing protein	A0A0M4R1U9	Streptomyces_phage	6.7e-11	28.3
WP_155323487.1\|4304073_4304571_-	hypothetical protein	NA	NA	NA	NA
WP_173179604.1\|4305148_4305598_+	universal stress protein	NA	NA	NA	NA
WP_155323489.1\|4305654_4306350_-	hemolysin III family protein	NA	NA	NA	NA
WP_155323490.1\|4306487_4306712_-	hypothetical protein	NA	NA	NA	NA
WP_155323491.1\|4306780_4307578_-	transglutaminase family protein	NA	NA	NA	NA
WP_173179606.1\|4307993_4308953_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155323493.1\|4309185_4310121_-	DUF4118 domain-containing protein	A0A218MLZ2	uncultured_virus	2.8e-26	32.7
WP_155323494.1\|4310184_4310670_-	hypothetical protein	NA	NA	NA	NA
WP_155323495.1\|4310792_4313900_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
WP_155323496.1\|4313896_4315306_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155323497.1\|4315491_4317015_-	TolC family protein	NA	NA	NA	NA
WP_155326068.1\|4317011_4318316_-	TolC family protein	NA	NA	NA	NA
WP_155323498.1\|4318733_4318976_-	hypothetical protein	NA	NA	NA	NA
WP_155323499.1\|4319391_4319721_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_155323500.1\|4319717_4320509_+	IS66 family insertion sequence element accessory protein TnpB	S5VTP8	Leptospira_phage	1.0e-37	51.0
WP_155326069.1\|4320858_4323225_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_155326070.1\|4323777_4324122_-	transcriptional regulator	NA	NA	NA	NA
WP_155326071.1\|4324141_4324504_-	hypothetical protein	NA	NA	NA	NA
WP_173179608.1\|4324557_4325499_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_155323502.1\|4325491_4326250_-	AAA family ATPase	Q8JL10	Natrialba_phage	5.2e-15	28.5
WP_155323503.1\|4326279_4327611_-	TraM recognition domain-containing protein	NA	NA	NA	NA
WP_155323504.1\|4327610_4328342_-	hypothetical protein	NA	NA	NA	NA
WP_155323505.1\|4328378_4328600_-	hypothetical protein	NA	NA	NA	NA
WP_155323506.1\|4328632_4329256_-	hypothetical protein	NA	NA	NA	NA
WP_155323507.1\|4329270_4329636_-	hypothetical protein	NA	NA	NA	NA
WP_155323508.1\|4329652_4330366_-	hypothetical protein	NA	NA	NA	NA
WP_155323509.1\|4330421_4330673_-	hypothetical protein	NA	NA	NA	NA
WP_155323510.1\|4330736_4333895_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA
WP_155323511.1\|4333891_4335307_-	conjugal transfer protein TraH	NA	NA	NA	NA
WP_173179610.1\|4335320_4336076_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_155323513.1\|4336113_4336578_-	S26 family signal peptidase	NA	NA	NA	NA
WP_155323514.1\|4336574_4337249_-	hypothetical protein	NA	NA	NA	NA
WP_173179612.1\|4337261_4338197_-	TraU family protein	NA	NA	NA	NA
WP_173179614.1\|4338168_4338753_-	hypothetical protein	NA	NA	NA	NA
WP_155323517.1\|4338712_4341208_-	TraC family protein	NA	NA	NA	NA
WP_155323518.1\|4341212_4341665_-	TraV family lipoprotein	NA	NA	NA	NA
WP_155323519.1\|4341666_4342938_-	hypothetical protein	NA	NA	NA	NA
WP_155323520.1\|4342947_4343727_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_155323521.1\|4343716_4344277_-	hypothetical protein	NA	NA	NA	NA
WP_155323522.1\|4344273_4344546_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_155323523.1\|4344572_4344887_-	hypothetical protein	NA	NA	NA	NA
WP_155323524.1\|4344891_4345068_-	hypothetical protein	NA	NA	NA	NA
WP_155323525.1\|4345064_4346483_-	hypothetical protein	H0USU2	Bacillus_phage	1.5e-23	47.7
WP_155323526.1\|4346794_4347613_-	hypothetical protein	NA	NA	NA	NA
WP_155323527.1\|4347907_4349800_-	EAL domain-containing protein	G3MA91	Bacillus_virus	2.9e-22	33.9
WP_155326072.1\|4349796_4351938_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_173179616.1\|4352039_4352855_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_155326073.1\|4352947_4354402_-	TolC family protein	NA	NA	NA	NA
WP_173179620.1\|4354492_4356271_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	1.5e-09	26.8
WP_173179621.1\|4356330_4358628_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-10	56.1
WP_155326075.1\|4359157_4360357_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_155312491.1\|4361091_4361655_-	hypothetical protein	NA	NA	NA	NA
WP_155326076.1\|4362001_4362127_-	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	1.8e-05	65.0
WP_155323530.1\|4362439_4363246_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_155326077.1\|4363175_4363535_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155326078.1\|4363650_4364031_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.3e-14	33.9
WP_155323531.1\|4364209_4366000_-	VCBS repeat-containing protein	NA	NA	NA	NA
WP_155323532.1\|4366123_4367560_-	hypothetical protein	NA	NA	NA	NA
WP_173179623.1\|4367939_4368407_+\|transposase	transposase	Q9JMN8	Wolbachia_phage	3.3e-28	64.8
WP_155323534.1\|4368508_4368775_-	DUF997 domain-containing protein	NA	NA	NA	NA
WP_155323535.1\|4369324_4370512_-	hypothetical protein	NA	NA	NA	NA
WP_155323536.1\|4370527_4370974_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_155323537.1\|4370998_4372105_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-08	60.7
WP_155323538.1\|4372858_4373944_+	GDP-mannose 4,6-dehydratase	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	2.0e-137	66.4
WP_155323539.1\|4373936_4375103_+	NAD-dependent epimerase/dehydratase family protein	M4R1H4	Synechococcus_phage	2.2e-89	46.6
WP_155323540.1\|4375407_4375674_-	hypothetical protein	NA	NA	NA	NA
WP_155323541.1\|4376510_4379813_+	PAS domain S-box protein	NA	NA	NA	NA
WP_173179625.1\|4379829_4380675_+	response regulator	NA	NA	NA	NA
WP_173179627.1\|4381032_4382733_+	PAS domain S-box protein	NA	NA	NA	NA
WP_155323543.1\|4382729_4383719_+	response regulator	NA	NA	NA	NA
WP_155323544.1\|4384303_4385077_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_155323545.1\|4385076_4385847_+	type III pantothenate kinase	NA	NA	NA	NA
WP_155323546.1\|4385926_4386967_-	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_155323547.1\|4387062_4387896_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_155323548.1\|4388000_4389260_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	6.1e-29	36.9
WP_155323549.1\|4389256_4389757_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_155323550.1\|4389806_4390112_+	hypothetical protein	NA	NA	NA	NA
WP_155323551.1\|4390181_4391555_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_173179629.1\|4391778_4393137_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_155323553.1\|4393724_4395158_+	adenosylhomocysteinase	S4W1G4	Pandoravirus	5.7e-47	30.3
WP_155323554.1\|4395177_4395669_-	hypothetical protein	NA	NA	NA	NA
WP_173179631.1\|4396067_4397858_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_155323556.1\|4397854_4398487_+	response regulator	NA	NA	NA	NA
WP_173179633.1\|4398752_4399169_+	response regulator transcription factor	NA	NA	NA	NA
WP_155312460.1\|4399152_4399590_+	universal stress protein	NA	NA	NA	NA
WP_155323558.1\|4399601_4400369_+	hypothetical protein	NA	NA	NA	NA
WP_155323559.1\|4400372_4402886_+	plasma-membrane proton-efflux P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	4.2e-53	26.7
WP_155313729.1\|4403767_4404649_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-22	28.3
4404650:4404709	attL	NA	NA	NA	NA
WP_155323560.1\|4406329_4407274_+	hypothetical protein	NA	NA	NA	NA
WP_155313729.1\|4407557_4408439_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-22	28.3
WP_173179634.1\|4410245_4412135_-	hypothetical protein	NA	NA	NA	NA
4408440:4410085	attR	NA	NA	NA	NA
WP_155323562.1\|4412426_4412978_-	hypothetical protein	NA	NA	NA	NA
WP_155323563.1\|4413035_4413584_-	hypothetical protein	NA	NA	NA	NA
WP_155323564.1\|4413641_4414178_-	hypothetical protein	NA	NA	NA	NA
WP_155323565.1\|4414197_4414740_-	hypothetical protein	NA	NA	NA	NA
WP_155323566.1\|4414880_4415051_-	hypothetical protein	NA	NA	NA	NA
WP_155320767.1\|4415319_4416117_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|4416210_4417596_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|4417592_4418408_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|4418398_4419370_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155323567.1\|4419366_4419813_+	hypothetical protein	NA	NA	NA	NA
WP_155323568.1\|4420066_4421356_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155323569.1\|4422281_4422683_-	PIN domain-containing protein	NA	NA	NA	NA
WP_155323570.1\|4422682_4422910_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_155323571.1\|4423080_4423464_+	hypothetical protein	NA	NA	NA	NA
WP_155323572.1\|4423671_4423962_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	5.5e-26	57.3
WP_155313818.1\|4423971_4424298_+	putative addiction module antidote protein	A0A141GEX5	Brucella_phage	1.3e-12	47.1
WP_155323573.1\|4424675_4424912_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
WP_155323574.1\|4424908_4425169_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_155321603.1\|4425344_4426655_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.5e-35	28.0

DBSCAN-SWA_21

5657667 : 5670799

Staphylococcus_phage(44.44%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155324345.1\|5657667_5659188_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	6.1e-84	35.2
WP_155326138.1\|5659201_5660317_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_155324346.1\|5660493_5661144_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_155324347.1\|5661140_5661602_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_155324348.1\|5661605_5662079_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.4e-34	50.3
WP_155324349.1\|5662097_5663324_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.5e-96	48.0
WP_155324350.1\|5663444_5664110_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	6.3e-33	38.9
WP_155324351.1\|5664151_5665252_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.1e-50	37.0
WP_155324352.1\|5665321_5665783_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_155324353.1\|5665846_5666356_-	cytidine deaminase	A0A285PY53	Cedratvirus	7.4e-50	59.6
WP_155324354.1\|5666381_5667629_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	5.7e-96	50.8
WP_155326139.1\|5667709_5668147_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_155324355.1\|5668414_5669656_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_155311936.1\|5669720_5669948_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.4e-05	31.9
WP_155324356.1\|5670052_5670799_-	3-oxoacyl-[acyl-carrier-protein] reductase	F2NZ40	Diadromus_pulchellus_ascovirus	1.3e-15	33.9

DBSCAN-SWA_22

5722017 : 5729838

Pseudomonas_phage(16.67%)

capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155321193.1\|5722017_5722557_-	phage virion morphogenesis protein	A0A2D1GNX5	Pseudomonas_phage	8.7e-09	26.9
WP_155324390.1\|5722559_5722991_-	DUF1320 family protein	NA	NA	NA	NA
WP_155324391.1\|5722994_5723294_-	hypothetical protein	NA	NA	NA	NA
WP_155324392.1\|5723364_5724372_-\|capsid	major capsid protein	NA	NA	NA	NA
WP_155324393.1\|5724405_5724777_-\|head	head decoration protein	R9TP46	Rhizobium_phage	1.1e-05	39.6
WP_155324394.1\|5724807_5725794_-	hypothetical protein	A4JWJ9	Burkholderia_virus	4.5e-27	30.4
WP_155324395.1\|5725790_5726543_-	hypothetical protein	A0A2H4IYU7	uncultured_Caudovirales_phage	1.3e-63	54.7
WP_155324396.1\|5726673_5728161_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	1.6e-97	42.3
WP_155324397.1\|5728350_5729838_-	hypothetical protein	M4MHG0	Vibrio_phage	3.3e-114	46.2

DBSCAN-SWA_23

6209708 : 6277891

Escherichia_phage(28.57%)

transposase,integrase

attL 6250767:6250781|attR 6278669:6278683

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155320858.1\|6209708_6210953_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_155320857.1\|6211030_6211537_-	hypothetical protein	NA	NA	NA	NA
WP_155324663.1\|6211862_6212534_+	DUF4384 domain-containing protein	NA	NA	NA	NA
WP_155324664.1\|6212699_6215729_+	CHAT domain-containing protein	NA	NA	NA	NA
WP_155326158.1\|6215961_6216561_+	DUF3786 domain-containing protein	NA	NA	NA	NA
WP_155324665.1\|6217387_6218416_+	molybdopterin-binding protein	NA	NA	NA	NA
WP_155324666.1\|6218492_6221213_+	molybdopterin-dependent oxidoreductase	A0A0P0IVM8	Acinetobacter_phage	3.4e-16	39.1
WP_155324667.1\|6221348_6223631_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155324668.1\|6223627_6223840_+	DNA-binding protein	NA	NA	NA	NA
WP_173179855.1\|6224006_6224708_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_155324670.1\|6224712_6225159_+	C-GCAxxG-C-C family protein	NA	NA	NA	NA
WP_173179857.1\|6225145_6225475_+	hypothetical protein	NA	NA	NA	NA
WP_155324672.1\|6225681_6226731_+	XdhC family protein	NA	NA	NA	NA
WP_155324673.1\|6226884_6228963_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	1.1e-30	25.1
WP_155324674.1\|6229347_6232113_+	formate dehydrogenase subunit alpha	A0A077SK27	Escherichia_phage	5.5e-22	24.9
WP_155324675.1\|6232234_6232996_+	hypothetical protein	NA	NA	NA	NA
WP_173179859.1\|6233469_6234213_+	hypothetical protein	NA	NA	NA	NA
WP_173179861.1\|6234290_6234773_-	cache domain-containing protein	NA	NA	NA	NA
WP_155324678.1\|6234915_6236931_-	transketolase	NA	NA	NA	NA
WP_155324679.1\|6237144_6238014_-	radical SAM protein	NA	NA	NA	NA
WP_155324680.1\|6238509_6239403_+	hypothetical protein	NA	NA	NA	NA
WP_155324681.1\|6239433_6245682_+	hypothetical protein	A0A2P0VP35	Tetraselmis_virus	2.1e-05	24.0
WP_155324682.1\|6245692_6246589_+	hypothetical protein	NA	NA	NA	NA
WP_155324683.1\|6246589_6261262_+	RHS domain-containing protein	A0A2H4JHK7	uncultured_Caudovirales_phage	2.4e-23	49.5
6250767:6250781	attL	NA	NA	NA	NA
WP_155324684.1\|6261287_6261671_+	hypothetical protein	NA	NA	NA	NA
WP_155320767.1\|6262974_6263772_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|6263865_6265251_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|6265247_6266063_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|6266053_6267025_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155321689.1\|6267021_6267654_+	hypothetical protein	NA	NA	NA	NA
WP_155320792.1\|6267732_6269895_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155321688.1\|6270010_6270274_+	toprim domain-containing protein	NA	NA	NA	NA
WP_155320860.1\|6271213_6271387_-	hypothetical protein	NA	NA	NA	NA
WP_173179000.1\|6271408_6272227_-	AAA family ATPase	NA	NA	NA	NA
WP_155324685.1\|6272213_6272816_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_155320792.1\|6272918_6275081_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155324686.1\|6275094_6275775_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155320857.1\|6275853_6276360_-	hypothetical protein	NA	NA	NA	NA
WP_173178989.1\|6277054_6277891_-\|transposase	transposase	NA	NA	NA	NA
6278669:6278683	attR	NA	NA	NA	NA

DBSCAN-SWA_24

6303939 : 6355670

Bacillus_virus(33.33%)

transposase,holin,integrase,tRNA

attL 6314037:6314061|attR 6355853:6355877

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155324706.1\|6303939_6305130_+\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.3e-25	33.0
WP_155324707.1\|6305311_6306901_+	diguanylate cyclase	G3MA91	Bacillus_virus	7.5e-24	39.2
WP_155324708.1\|6307096_6307798_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.0e-17	26.7
WP_155324709.1\|6307785_6308550_-	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	1.3e-13	27.9
WP_155326161.1\|6308542_6309526_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_155324710.1\|6309573_6310488_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_155324711.1\|6310497_6311670_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155324712.1\|6312082_6312496_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_155326162.1\|6312620_6312986_+	translation initiation factor Sui1	NA	NA	NA	NA
WP_155324713.1\|6313149_6313833_+	HAD-IA family hydrolase	NA	NA	NA	NA
6314037:6314061	attL	NA	NA	NA	NA
WP_155326163.1\|6314098_6315625_-	radical SAM protein	NA	NA	NA	NA
WP_155324714.1\|6315636_6317499_-	ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	2.3e-56	29.2
WP_155324715.1\|6317495_6318239_-	NAD-dependent protein deacylase	A0A2I7S9Y2	Vibrio_phage	7.8e-16	31.9
WP_155324716.1\|6318723_6319650_+	hypothetical protein	NA	NA	NA	NA
WP_155324717.1\|6319760_6320099_+	hypothetical protein	NA	NA	NA	NA
WP_173179863.1\|6320091_6320397_+	hypothetical protein	NA	NA	NA	NA
WP_155324718.1\|6321027_6321510_-	hypothetical protein	NA	NA	NA	NA
WP_155326165.1\|6322104_6322704_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
WP_173179865.1\|6322613_6322916_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_155322046.1\|6323576_6324062_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155324719.1\|6324721_6325393_+	hypothetical protein	NA	NA	NA	NA
WP_155326167.1\|6325428_6325611_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_155324720.1\|6325721_6326351_+	hypothetical protein	NA	NA	NA	NA
WP_155324721.1\|6326879_6327350_-	RES domain-containing protein	NA	NA	NA	NA
WP_173179867.1\|6327346_6327757_-	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_155312586.1\|6328366_6328696_+	DUF134 domain-containing protein	NA	NA	NA	NA
WP_155312587.1\|6328736_6329081_+	DUF5320 family protein	NA	NA	NA	NA
WP_155312588.1\|6329185_6329467_-	hypothetical protein	NA	NA	NA	NA
WP_155324723.1\|6329687_6330983_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_173179869.1\|6330984_6331899_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_155312591.1\|6333206_6333650_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_155324725.1\|6333694_6334045_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_173179016.1\|6334077_6335733_-	hypothetical protein	NA	NA	NA	NA
WP_155320949.1\|6335748_6335985_+	hypothetical protein	NA	NA	NA	NA
WP_155320948.1\|6335981_6336674_-	hypothetical protein	NA	NA	NA	NA
WP_155324726.1\|6336997_6337270_+	hypothetical protein	NA	NA	NA	NA
WP_173179871.1\|6337665_6339213_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_155324728.1\|6339618_6340353_-	hypothetical protein	NA	NA	NA	NA
WP_155324729.1\|6340673_6342437_-	chloride channel protein	NA	NA	NA	NA
WP_155324730.1\|6342838_6343774_-	EamA family transporter	NA	NA	NA	NA
WP_173179873.1\|6344367_6345762_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_155326168.1\|6345814_6346087_+	hypothetical protein	NA	NA	NA	NA
WP_155324732.1\|6346313_6347075_-	hypothetical protein	NA	NA	NA	NA
WP_155321248.1\|6347644_6348763_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155324733.1\|6349153_6353446_-	hypothetical protein	NA	NA	NA	NA
WP_155324734.1\|6354016_6354187_-	hypothetical protein	NA	NA	NA	NA
WP_155314210.1\|6354299_6355670_+\|transposase	IS4 family transposase	NA	NA	NA	NA
6355853:6355877	attR	NA	NA	NA	NA

DBSCAN-SWA_25

6380250 : 6417727

uncultured_Mediterranean_phage(40.0%)

transposase,integrase

attL 6387297:6387319|attR 6422728:6422750

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173178975.1\|6380250_6381636_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|6381729_6382527_-	hypothetical protein	NA	NA	NA	NA
WP_155324752.1\|6382775_6383774_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1IVT4	uncultured_Mediterranean_phage	1.4e-07	24.7
WP_155324753.1\|6383770_6384745_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155324754.1\|6384731_6385943_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155324755.1\|6385948_6386353_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155324756.1\|6386492_6386747_-	hypothetical protein	NA	NA	NA	NA
6387297:6387319	attL	NA	NA	NA	NA
WP_155324757.1\|6387607_6388093_+	metallophosphoesterase	NA	NA	NA	NA
WP_155320792.1\|6390051_6392214_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_173179879.1\|6392343_6392676_+\|transposase	transposase	NA	NA	NA	NA
WP_155324759.1\|6392739_6392895_-	hypothetical protein	NA	NA	NA	NA
WP_155324760.1\|6392899_6393592_-	hypothetical protein	NA	NA	NA	NA
WP_155326172.1\|6393689_6393992_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_155324761.1\|6394151_6394436_+	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	8.9e-13	44.0
WP_155324762.1\|6394484_6394796_+	EthD family reductase	NA	NA	NA	NA
WP_155324763.1\|6394879_6395824_+	hypothetical protein	NA	NA	NA	NA
WP_155324764.1\|6395933_6396590_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_155324765.1\|6397073_6397424_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_155324766.1\|6397501_6397846_-	hypothetical protein	NA	NA	NA	NA
WP_155326129.1\|6398661_6399594_+\|transposase	transposase	NA	NA	NA	NA
WP_155324767.1\|6399916_6400528_+	hypothetical protein	NA	NA	NA	NA
WP_155324768.1\|6401598_6402861_+	hypothetical protein	NA	NA	NA	NA
WP_155324769.1\|6403629_6404649_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1IVT4	uncultured_Mediterranean_phage	1.8e-07	24.7
WP_155324753.1\|6404645_6405620_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155324770.1\|6405606_6405825_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155320763.1\|6406081_6407017_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155324771.1\|6407013_6407826_-	AAA family ATPase	A0A2I6PI97	Pseudomonas_phage	4.2e-07	28.1
WP_155320657.1\|6407904_6408873_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_155324772.1\|6408903_6409059_-	hypothetical protein	NA	NA	NA	NA
WP_155320765.1\|6409049_6409865_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|6409861_6411247_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|6411340_6412138_-	hypothetical protein	NA	NA	NA	NA
WP_155324773.1\|6412373_6413387_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155324755.1\|6413392_6413797_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155324756.1\|6413936_6414191_-	hypothetical protein	NA	NA	NA	NA
WP_155321603.1\|6414611_6415922_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.5e-35	28.0
WP_173179881.1\|6416353_6417727_+\|transposase	IS110 family transposase	NA	NA	NA	NA
6422728:6422750	attR	NA	NA	NA	NA

DBSCAN-SWA_26

6654911 : 6660686

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155324920.1\|6654911_6656420_+	chorismate-binding protein	S4VT78	Pandoravirus	4.0e-43	30.8
WP_155312931.1\|6656416_6656998_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A0P0IKJ1	Acinetobacter_phage	2.4e-49	48.9
WP_155324921.1\|6657016_6658033_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	6.8e-63	40.5
WP_155324922.1\|6658044_6658857_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.7e-38	39.4
WP_155324923.1\|6658853_6659564_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_155326186.1\|6659577_6659808_+	YheU family protein	A0A2H4J8A7	uncultured_Caudovirales_phage	6.3e-09	47.1
WP_155324924.1\|6659843_6660686_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	7.5e-23	33.1

DBSCAN-SWA_27

7204399 : 7305825

Bacillus_phage(25.0%)

transposase,integrase,protease

attL 7303004:7303030|attR 7309422:7309448

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325223.1\|7204399_7204927_-\|protease	protease complex subunit PrcB family protein	NA	NA	NA	NA
WP_155325224.1\|7204923_7207947_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	1.6e-27	35.0
WP_162459172.1\|7208165_7208801_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_155325226.1\|7209670_7211152_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_155325227.1\|7211157_7212474_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_173180197.1\|7212508_7213198_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-33	38.8
WP_155314451.1\|7213197_7214409_+	ABC transporter permease	NA	NA	NA	NA
WP_173179978.1\|7214470_7215181_+	response regulator transcription factor	NA	NA	NA	NA
WP_155325229.1\|7215223_7218901_-	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	2.1e-13	23.8
WP_173179980.1\|7219446_7221474_+	TonB-dependent receptor	NA	NA	NA	NA
WP_173179982.1\|7221448_7223536_+	ATP-binding cassette domain-containing protein	A0A285PWH2	Cedratvirus	1.5e-11	30.2
WP_155325232.1\|7223541_7224066_+	hypothetical protein	NA	NA	NA	NA
WP_155325233.1\|7224093_7224810_+	hypothetical protein	NA	NA	NA	NA
WP_155325234.1\|7224997_7225309_+	hypothetical protein	NA	NA	NA	NA
WP_155325235.1\|7225408_7227148_-	aldehyde ferredoxin oxidoreductase	NA	NA	NA	NA
WP_155325236.1\|7227158_7227443_-	glutaredoxin family protein	NA	NA	NA	NA
WP_155325237.1\|7227562_7228729_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_155325238.1\|7229152_7230295_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_155325239.1\|7230294_7231506_+	PAS domain-containing protein	W8CYF6	Bacillus_phage	2.8e-15	29.4
WP_155325240.1\|7231502_7232840_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_155325241.1\|7233029_7234844_+	acyl-CoA dehydrogenase C-terminal domain-containing protein	NA	NA	NA	NA
WP_155325242.1\|7235104_7235401_+	hypothetical protein	NA	NA	NA	NA
WP_155313480.1\|7235468_7235687_+	DNA-binding protein	NA	NA	NA	NA
WP_155325243.1\|7235693_7236416_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_155313482.1\|7236408_7236846_+	C-GCAxxG-C-C family protein	NA	NA	NA	NA
WP_155325244.1\|7236826_7238242_+	radical SAM protein	NA	NA	NA	NA
WP_155325245.1\|7238238_7239549_+	AMP-binding protein	NA	NA	NA	NA
WP_155325246.1\|7239622_7239934_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_155325247.1\|7239912_7240269_-	hypothetical protein	NA	NA	NA	NA
WP_155325248.1\|7240242_7241052_+	DUF2914 domain-containing protein	NA	NA	NA	NA
WP_155320855.1\|7241175_7242702_+\|transposase	transposase	NA	NA	NA	NA
WP_155325249.1\|7243085_7244039_-	universal stress protein	NA	NA	NA	NA
WP_155325250.1\|7244119_7245526_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_155326209.1\|7245527_7248701_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_173179984.1\|7248700_7250029_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155325251.1\|7250271_7250577_-	hypothetical protein	NA	NA	NA	NA
WP_155325252.1\|7250791_7252342_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_173179986.1\|7252705_7253461_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_155325254.1\|7253618_7254086_-	PaaI family thioesterase	NA	NA	NA	NA
WP_155320767.1\|7254612_7255410_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|7255503_7256889_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|7256885_7257701_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|7257691_7258663_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320763.1\|7258659_7259595_+	toprim domain-containing protein	NA	NA	NA	NA
WP_155313494.1\|7259960_7260236_+	hypothetical protein	NA	NA	NA	NA
WP_155325255.1\|7260928_7261153_-	hypothetical protein	NA	NA	NA	NA
WP_155325256.1\|7261235_7261811_+	hypothetical protein	NA	NA	NA	NA
WP_155325257.1\|7261879_7262236_+	hypothetical protein	NA	NA	NA	NA
WP_155325258.1\|7262673_7263369_+	restriction endonuclease	NA	NA	NA	NA
WP_155322534.1\|7263532_7265800_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155325259.1\|7266183_7266936_+	hypothetical protein	NA	NA	NA	NA
WP_155325260.1\|7267418_7268369_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155325261.1\|7268453_7269254_+\|transposase	transposase	NA	NA	NA	NA
WP_155325262.1\|7269324_7269732_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325263.1\|7270500_7271772_+	hypothetical protein	NA	NA	NA	NA
WP_155325264.1\|7271982_7272705_+	hypothetical protein	NA	NA	NA	NA
WP_155325265.1\|7272867_7274103_+	hypothetical protein	NA	NA	NA	NA
WP_155325266.1\|7274864_7275446_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155308342.1\|7275688_7275862_-	hypothetical protein	NA	NA	NA	NA
WP_173179000.1\|7275883_7276702_-	AAA family ATPase	NA	NA	NA	NA
WP_155320858.1\|7276688_7277933_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_155320857.1\|7278010_7278517_-	hypothetical protein	NA	NA	NA	NA
WP_155325267.1\|7278807_7279311_-\|transposase	transposase	NA	NA	NA	NA
WP_155325268.1\|7279446_7279971_+	hypothetical protein	NA	NA	NA	NA
WP_155325269.1\|7280129_7280387_+	hypothetical protein	NA	NA	NA	NA
WP_155325270.1\|7280580_7280847_+	hypothetical protein	NA	NA	NA	NA
WP_155326211.1\|7280974_7281172_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155325271.1\|7281328_7281703_+	hypothetical protein	NA	NA	NA	NA
WP_155325272.1\|7281857_7282304_+	hypothetical protein	NA	NA	NA	NA
WP_155325273.1\|7282359_7282740_+	hypothetical protein	NA	NA	NA	NA
WP_155320855.1\|7282836_7284363_+\|transposase	transposase	NA	NA	NA	NA
WP_155322534.1\|7284667_7286935_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155325274.1\|7287175_7287601_+	GNAT family acetyltransferase	NA	NA	NA	NA
WP_155325275.1\|7287762_7288128_+	hypothetical protein	NA	NA	NA	NA
WP_155324023.1\|7288295_7288562_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2P1N333	Gordonia_phage	5.8e-14	45.8
WP_155322976.1\|7288558_7288810_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_155325276.1\|7289021_7289450_+	hypothetical protein	NA	NA	NA	NA
WP_155325277.1\|7289660_7289966_+	hypothetical protein	NA	NA	NA	NA
WP_155325278.1\|7290022_7290919_+	hypothetical protein	NA	NA	NA	NA
WP_155325279.1\|7291061_7291466_+	hypothetical protein	NA	NA	NA	NA
WP_155325280.1\|7291706_7292084_+	hypothetical protein	NA	NA	NA	NA
WP_155325281.1\|7292339_7292783_+	hypothetical protein	NA	NA	NA	NA
WP_155325283.1\|7293074_7293866_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_155325284.1\|7294006_7295557_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_155320799.1\|7295609_7295981_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_173178989.1\|7296081_7296918_+\|transposase	transposase	NA	NA	NA	NA
WP_155325285.1\|7297050_7297464_-	hypothetical protein	NA	NA	NA	NA
WP_155325286.1\|7297915_7298269_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155326212.1\|7298265_7299573_+	HipA domain-containing protein	NA	NA	NA	NA
WP_155320948.1\|7300370_7301063_+	hypothetical protein	NA	NA	NA	NA
WP_155320949.1\|7301059_7301296_-	hypothetical protein	NA	NA	NA	NA
WP_173179988.1\|7301431_7302967_+	hypothetical protein	NA	NA	NA	NA
7303004:7303030	attL	NA	NA	NA	NA
WP_155326213.1\|7303744_7304539_-	AAA family ATPase	NA	NA	NA	NA
WP_155325288.1\|7304550_7305825_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
7309422:7309448	attR	NA	NA	NA	NA

DBSCAN-SWA_28

7398283 : 7426139

Shigella_phage(20.0%)

transposase,integrase

attL 7397704:7397717|attR 7428482:7428495

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
7397704:7397717	attL	NA	NA	NA	NA
WP_155321396.1\|7398283_7399528_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_173179000.1\|7399514_7400333_+	AAA family ATPase	NA	NA	NA	NA
WP_155308342.1\|7400354_7400528_+	hypothetical protein	NA	NA	NA	NA
WP_155320767.1\|7400866_7401664_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|7401757_7403143_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|7403139_7403955_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|7403945_7404917_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320763.1\|7404913_7405849_+	toprim domain-containing protein	NA	NA	NA	NA
WP_155325349.1\|7406190_7409004_-	hypothetical protein	NA	NA	NA	NA
WP_173180002.1\|7409063_7410608_-	flippase	NA	NA	NA	NA
WP_155321603.1\|7410900_7412211_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.5e-35	28.0
WP_155325351.1\|7412249_7412858_-	adenylyl-sulfate kinase	A0A2P1ELS9	Moumouvirus	7.8e-22	39.1
WP_155322046.1\|7413685_7414171_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155325352.1\|7414591_7414984_-	type II toxin-antitoxin system death-on-curing family toxin	D0R0D2	Streptococcus_phage	1.0e-11	33.3
WP_155325353.1\|7414980_7415205_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_155320799.1\|7416946_7417318_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_173178989.1\|7417418_7418255_+\|transposase	transposase	NA	NA	NA	NA
WP_155325354.1\|7418914_7419139_+	hypothetical protein	NA	NA	NA	NA
WP_155325355.1\|7419496_7419772_+	hypothetical protein	NA	NA	NA	NA
WP_155325356.1\|7419850_7420588_-	hypothetical protein	NA	NA	NA	NA
WP_155325357.1\|7420616_7421852_-	cytoplasmic protein	NA	NA	NA	NA
WP_155325358.1\|7421855_7423010_-	hypothetical protein	NA	NA	NA	NA
WP_155325359.1\|7423006_7423924_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_155325360.1\|7423925_7424522_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
WP_155325361.1\|7424969_7426139_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
7428482:7428495	attR	NA	NA	NA	NA

DBSCAN-SWA_29

7632707 : 7700594

Bacillus_phage(20.0%)

transposase,integrase,protease

attL 7684493:7684552|attR 7703445:7708936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325497.1\|7632707_7633571_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_155325498.1\|7633564_7634524_-	aldo/keto reductase	NA	NA	NA	NA
WP_155325499.1\|7634770_7637110_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_155325500.1\|7638183_7638861_-	response regulator	NA	NA	NA	NA
WP_173180044.1\|7638829_7640866_-	PAS domain S-box protein	NA	NA	NA	NA
WP_155313688.1\|7640905_7641154_+	hypothetical protein	NA	NA	NA	NA
WP_155313689.1\|7641169_7641427_+	hypothetical protein	NA	NA	NA	NA
WP_173180046.1\|7641721_7642126_-	GatB/YqeY domain-containing protein	NA	NA	NA	NA
WP_155325503.1\|7642109_7642709_-	hypothetical protein	NA	NA	NA	NA
WP_155313692.1\|7642948_7643626_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155325504.1\|7643603_7645028_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.3e-23	28.1
WP_155325505.1\|7645315_7647670_+	response regulator	A0A1V0SGX0	Hokovirus	4.4e-12	26.4
WP_173180048.1\|7647858_7649301_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	8.9e-24	28.8
WP_173180050.1\|7649577_7650210_-	DUF2284 domain-containing protein	NA	NA	NA	NA
WP_155313696.1\|7650226_7650514_-	transcriptional regulator	NA	NA	NA	NA
WP_155313697.1\|7650715_7650886_+	hypothetical protein	NA	NA	NA	NA
WP_155313698.1\|7650958_7651672_-	hypothetical protein	NA	NA	NA	NA
WP_155326225.1\|7651851_7654035_+	RNA degradosome polyphosphate kinase	NA	NA	NA	NA
WP_155325507.1\|7654053_7654554_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_155313700.1\|7654641_7654821_+	hypothetical protein	NA	NA	NA	NA
WP_155325508.1\|7654864_7655299_-	NUDIX domain-containing protein	S5VM37	Pseudomonas_phage	7.5e-11	35.0
WP_155313702.1\|7655295_7655775_-	adenylate cyclase	NA	NA	NA	NA
WP_155325509.1\|7655764_7656529_-	AAA family ATPase	A0A240F4U1	Ochrobactrum_phage	2.8e-13	29.0
WP_155325510.1\|7656580_7658110_-	CHAD domain-containing protein	NA	NA	NA	NA
WP_155325511.1\|7658256_7659156_-	exopolyphosphatase	NA	NA	NA	NA
WP_155325512.1\|7659187_7659496_-	hypothetical protein	NA	NA	NA	NA
WP_155325513.1\|7659910_7660936_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173180203.1\|7661943_7662795_+	hypothetical protein	W8CYF6	Bacillus_phage	1.9e-13	27.9
WP_155325515.1\|7662903_7663362_+	response regulator	NA	NA	NA	NA
WP_155325516.1\|7663358_7666046_+	response regulator	NA	NA	NA	NA
WP_155325517.1\|7666076_7666346_+	response regulator	A0A1V0SGR9	Hokovirus	4.3e-09	37.3
WP_173180052.1\|7666682_7666973_+	hypothetical protein	NA	NA	NA	NA
WP_162459201.1\|7667579_7669274_+	alkaline phosphatase	NA	NA	NA	NA
WP_155325519.1\|7669386_7669818_-	TonB family protein	NA	NA	NA	NA
WP_155325520.1\|7669858_7671043_-	hypothetical protein	NA	NA	NA	NA
WP_162459202.1\|7671116_7671992_-	hypothetical protein	NA	NA	NA	NA
WP_155325521.1\|7672061_7674053_-	hypothetical protein	NA	NA	NA	NA
WP_155325522.1\|7674049_7675924_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.9e-83	32.6
WP_155325523.1\|7676154_7679019_-	metallophosphoesterase	NA	NA	NA	NA
WP_155313718.1\|7679046_7679361_-	hypothetical protein	NA	NA	NA	NA
WP_155325524.1\|7679926_7680217_-	hypothetical protein	NA	NA	NA	NA
WP_155325525.1\|7680769_7681546_+	hypothetical protein	NA	NA	NA	NA
WP_155323907.1\|7682136_7682835_-	hypothetical protein	NA	NA	NA	NA
WP_173180175.1\|7682771_7683326_-\|transposase	transposase	NA	NA	NA	NA
7684493:7684552	attL	NA	NA	NA	NA
WP_155320763.1\|7684696_7685632_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320764.1\|7685628_7686600_-	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320765.1\|7686590_7687406_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|7687402_7688788_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|7688881_7689679_-	hypothetical protein	NA	NA	NA	NA
WP_155325526.1\|7690617_7691220_+	hypothetical protein	NA	NA	NA	NA
WP_173180205.1\|7691600_7692995_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_155325528.1\|7693191_7694007_+	hypothetical protein	NA	NA	NA	NA
WP_155325529.1\|7694008_7695151_+	hypothetical protein	NA	NA	NA	NA
WP_155325530.1\|7695185_7695626_+	hypothetical protein	NA	NA	NA	NA
WP_155325531.1\|7695776_7696004_+	hypothetical protein	NA	NA	NA	NA
WP_155320860.1\|7696181_7696355_-	hypothetical protein	NA	NA	NA	NA
WP_173179000.1\|7696376_7697195_-	AAA family ATPase	NA	NA	NA	NA
WP_155325532.1\|7697181_7698012_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	3.1e-05	26.7
WP_155320767.1\|7698317_7699115_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|7699208_7700594_+\|transposase	transposase	NA	NA	NA	NA
7703445:7708936	attR	NA	NA	NA	NA

DBSCAN-SWA_30

7704538 : 7749327

Microbacterium_phage(50.0%)

transposase,integrase

attL 7742072:7742098|attR 7745485:7745511

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155322534.1\|7704538_7706806_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155325534.1\|7707388_7708420_+	hypothetical protein	NA	NA	NA	NA
WP_155325535.1\|7708379_7708796_+	hypothetical protein	NA	NA	NA	NA
WP_155325536.1\|7708961_7709543_+	hypothetical protein	NA	NA	NA	NA
WP_173180054.1\|7709753_7711025_+	dGTPase	NA	NA	NA	NA
WP_155325538.1\|7712717_7713362_+	hypothetical protein	NA	NA	NA	NA
WP_155322230.1\|7713580_7714375_+\|transposase	transposase	NA	NA	NA	NA
WP_155325539.1\|7714576_7714969_+	hypothetical protein	NA	NA	NA	NA
WP_155325540.1\|7715082_7715340_+	hypothetical protein	NA	NA	NA	NA
WP_173180207.1\|7715669_7715894_+	NIPSNAP family protein	NA	NA	NA	NA
WP_155325541.1\|7716572_7716938_-	hypothetical protein	NA	NA	NA	NA
WP_155320855.1\|7717193_7718720_-\|transposase	transposase	NA	NA	NA	NA
WP_155325542.1\|7718816_7719464_-	hypothetical protein	NA	NA	NA	NA
WP_155325543.1\|7719632_7720631_+\|transposase	transposase	NA	NA	NA	NA
WP_155325544.1\|7720695_7721469_-	DUF4277 domain-containing protein	NA	NA	NA	NA
WP_155313729.1\|7721749_7722631_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.7e-22	28.3
WP_173180056.1\|7722614_7723202_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_155320763.1\|7723337_7724273_-	toprim domain-containing protein	NA	NA	NA	NA
WP_155320764.1\|7724269_7725241_-	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320765.1\|7725231_7726047_-	AAA family ATPase	NA	NA	NA	NA
WP_173178975.1\|7726043_7727429_-\|transposase	transposase	NA	NA	NA	NA
WP_155320767.1\|7727522_7728320_-	hypothetical protein	NA	NA	NA	NA
WP_173180058.1\|7728627_7729350_+\|transposase	transposase	NA	NA	NA	NA
WP_155325547.1\|7729853_7730519_+	hypothetical protein	NA	NA	NA	NA
WP_155320767.1\|7731131_7731929_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|7732022_7733408_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|7733404_7734220_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|7734210_7735182_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155320763.1\|7735178_7736114_+	toprim domain-containing protein	NA	NA	NA	NA
WP_155325548.1\|7736372_7736603_+	hypothetical protein	NA	NA	NA	NA
WP_155325549.1\|7737381_7737576_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_155325550.1\|7737572_7737950_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_155326226.1\|7738189_7738519_+	calcium-binding protein	NA	NA	NA	NA
WP_155325551.1\|7738688_7739045_+	hypothetical protein	NA	NA	NA	NA
WP_155312879.1\|7739305_7739536_+	addiction module protein	NA	NA	NA	NA
WP_155325552.1\|7739746_7740088_-	hypothetical protein	NA	NA	NA	NA
WP_173180209.1\|7740656_7742027_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.4e-31	33.2
7742072:7742098	attL	NA	NA	NA	NA
WP_155325553.1\|7742198_7743449_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325554.1\|7743445_7744399_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325555.1\|7744391_7745408_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325556.1\|7745615_7746248_+	methyltransferase domain-containing protein	NA	NA	NA	NA
7745485:7745511	attR	NA	NA	NA	NA
WP_155325557.1\|7746370_7746763_+	PIN domain-containing protein	NA	NA	NA	NA
WP_155325558.1\|7746764_7746983_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_155325559.1\|7747085_7747433_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_155325560.1\|7747401_7747674_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_155326129.1\|7748394_7749327_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_31

7803317 : 7844068

Tetraselmis_virus(25.0%)

transposase,integrase

attL 7803929:7803942|attR 7845014:7845027

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325593.1\|7803317_7804286_+\|transposase	transposase	NA	NA	NA	NA
7803929:7803942	attL	NA	NA	NA	NA
WP_155325594.1\|7804343_7804643_+	hypothetical protein	NA	NA	NA	NA
WP_173180211.1\|7805477_7806197_+	PAS domain S-box protein	NA	NA	NA	NA
WP_155325596.1\|7806322_7807072_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_173180066.1\|7807106_7807589_-	DUF2062 domain-containing protein	NA	NA	NA	NA
WP_155325598.1\|7807595_7808648_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_155325599.1\|7808664_7809672_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_155325600.1\|7809643_7812106_-	hypothetical protein	NA	NA	NA	NA
WP_155325601.1\|7812569_7813193_+	hypothetical protein	NA	NA	NA	NA
WP_155325602.1\|7813961_7814285_+	hypothetical protein	NA	NA	NA	NA
WP_155325603.1\|7814626_7816012_+	hypothetical protein	NA	NA	NA	NA
WP_155325604.1\|7816611_7816854_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_040874629.1\|7816838_7817177_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_155325605.1\|7817432_7817918_+	hypothetical protein	NA	NA	NA	NA
WP_155325555.1\|7818168_7819185_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325554.1\|7819177_7820131_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325606.1\|7820127_7821378_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155325607.1\|7822409_7824371_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_173180068.1\|7824621_7826082_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_155325609.1\|7826178_7826553_-	hypothetical protein	NA	NA	NA	NA
WP_155325610.1\|7827125_7828508_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_155314477.1\|7828783_7829164_+	DUF1992 domain-containing protein	NA	NA	NA	NA
WP_155313836.1\|7829176_7829668_+	SHOCT domain-containing protein	NA	NA	NA	NA
WP_155326231.1\|7829896_7830850_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_155325611.1\|7831068_7832841_+	phosphoribosylamine--glycine ligase	A0A2P0VNU7	Tetraselmis_virus	3.6e-19	44.7
WP_155326232.1\|7832851_7833469_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	6.5e-16	30.9
WP_173180070.1\|7834289_7834961_+	alpha/beta hydrolase	A0A2R8FCZ0	Brazilian_cedratvirus	3.4e-10	26.4
WP_155325613.1\|7835036_7835489_-	hypothetical protein	NA	NA	NA	NA
WP_155325614.1\|7835485_7837105_-	hypothetical protein	NA	NA	NA	NA
WP_155320857.1\|7837629_7838136_+	hypothetical protein	NA	NA	NA	NA
WP_155321396.1\|7838214_7839459_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_173179000.1\|7839445_7840264_+	AAA family ATPase	NA	NA	NA	NA
WP_155308342.1\|7840285_7840459_+	hypothetical protein	NA	NA	NA	NA
WP_155323901.1\|7840716_7841409_-	hypothetical protein	NA	NA	NA	NA
WP_155324756.1\|7842052_7842307_+	hypothetical protein	NA	NA	NA	NA
WP_155324755.1\|7842446_7842851_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155324754.1\|7842856_7844068_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
7845014:7845027	attR	NA	NA	NA	NA

DBSCAN-SWA_32

7977608 : 8033500

Bacillus_phage(16.67%)

transposase,integrase,tRNA

attL 7997307:7997324|attR 8018923:8018940

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155325703.1\|7977608_7979684_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_155325704.1\|7979785_7980661_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_155326239.1\|7980854_7981922_-	galactokinase	NA	NA	NA	NA
WP_155313944.1\|7981914_7982712_-	DNA repair protein RecO	NA	NA	NA	NA
WP_155325705.1\|7982716_7984069_-	magnesium transporter	NA	NA	NA	NA
WP_155313946.1\|7984068_7984791_-	DUF4115 domain-containing protein	NA	NA	NA	NA
WP_155325706.1\|7984840_7985830_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_173180090.1\|7985829_7986522_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_155325708.1\|7986609_7990080_-	transcription-repair coupling factor	NA	NA	NA	NA
WP_173180092.1\|7990457_7992317_+	ATP-dependent helicase	A7KV33	Bacillus_phage	1.4e-90	34.1
WP_155313951.1\|7992638_7992971_+	hypothetical protein	NA	NA	NA	NA
WP_155313952.1\|7993030_7993177_+	hypothetical protein	NA	NA	NA	NA
WP_155313953.1\|7993213_7993495_+	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	1.0e-08	41.7
WP_155325710.1\|7993643_7993916_-	hypothetical protein	NA	NA	NA	NA
WP_155325711.1\|7994113_7994674_+	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_155325712.1\|7994751_7995729_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA
WP_155314485.1\|7995866_7996346_+	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_155325713.1\|7996342_7997623_+	TRAP transporter large permease subunit	NA	NA	NA	NA
7997307:7997324	attL	NA	NA	NA	NA
WP_155325714.1\|7997671_7999732_-	PAS domain S-box protein	NA	NA	NA	NA
WP_173178951.1\|7999860_8000016_+	hypothetical protein	NA	NA	NA	NA
WP_155325715.1\|7999951_8000290_+	hypothetical protein	NA	NA	NA	NA
WP_155313964.1\|8000626_8003014_+	PAS domain S-box protein	NA	NA	NA	NA
WP_155325716.1\|8003388_8003754_-	response regulator	A0A1J0GWE0	Alteromonas_phage	5.2e-05	33.3
WP_155325717.1\|8003955_8004687_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_173180094.1\|8004853_8005495_+	hypothetical protein	NA	NA	NA	NA
WP_155325719.1\|8005464_8005740_+	AMP-binding protein	NA	NA	NA	NA
WP_155325720.1\|8005942_8008213_-	TonB-dependent receptor	NA	NA	NA	NA
WP_155325721.1\|8008697_8009861_-	diguanylate cyclase	NA	NA	NA	NA
WP_155320857.1\|8010229_8010736_+	hypothetical protein	NA	NA	NA	NA
WP_155320858.1\|8010813_8012058_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	4.7e-05	26.7
WP_173179000.1\|8012044_8012863_+	AAA family ATPase	NA	NA	NA	NA
WP_155320860.1\|8012884_8013058_+	hypothetical protein	NA	NA	NA	NA
WP_155325722.1\|8013225_8013651_-	hypothetical protein	NA	NA	NA	NA
WP_155325723.1\|8013792_8013945_-	hypothetical protein	NA	NA	NA	NA
WP_155321404.1\|8014706_8016047_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_155313972.1\|8016437_8016782_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_173180096.1\|8016889_8017780_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_155313973.1\|8018190_8018583_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_155325725.1\|8018606_8019410_+	TSUP family transporter	NA	NA	NA	NA
8018923:8018940	attR	NA	NA	NA	NA
WP_155325726.1\|8019569_8019746_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_155326240.1\|8020297_8021692_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_155320767.1\|8021998_8022796_+	hypothetical protein	NA	NA	NA	NA
WP_173178975.1\|8022889_8024275_+\|transposase	transposase	NA	NA	NA	NA
WP_155320765.1\|8024271_8025087_+	AAA family ATPase	NA	NA	NA	NA
WP_155320764.1\|8025077_8026049_+	AAA family ATPase	A0A2R4A1S8	Microbacterium_phage	2.3e-15	28.2
WP_155323084.1\|8026045_8026981_+	toprim domain-containing protein	NA	NA	NA	NA
WP_155322534.1\|8028272_8030540_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155325727.1\|8030585_8031875_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_155325728.1\|8032365_8033500_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.3e-22	28.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP021877

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18783 : 79199

Salmonella_phage(21.43%)

integrase,transposase

attL 11690:11706|attR 47982:47998

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
11690:11706	attL	NA	NA	NA	NA
WP_155326268.1\|18783_19833_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_155326269.1\|20016_21744_-	VCBS repeat-containing protein	NA	NA	NA	NA
WP_173180230.1\|21877_23377_-	glycosyltransferase	NA	NA	NA	NA
WP_155326271.1\|23569_24523_+\|integrase	tyrosine-type recombinase/integrase	A0A2P1A0S4	Gordonia_phage	2.2e-07	30.0
WP_155326272.1\|24500_27506_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.3e-40	22.4
WP_155326273.1\|27517_27727_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_155326274.1\|27727_27952_+	type II toxin-antitoxin system HicA family toxin	A0A0A7RWW9	Clostridium_phage	3.4e-07	50.0
WP_155326275.1\|28149_28536_-	VOC family protein	NA	NA	NA	NA
WP_155326276.1\|28539_28875_-	cupin domain-containing protein	NA	NA	NA	NA
WP_155326277.1\|29005_29566_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_155326278.1\|29620_31918_-	cbb3-type cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_155326279.1\|32093_33662_+	nitric oxide reductase transcriptional regulator NorR	NA	NA	NA	NA
WP_155326375.1\|33662_33923_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155326280.1\|33962_35363_-	hydroxylamine oxidoreductase	NA	NA	NA	NA
WP_155326281.1\|35417_35981_-	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_173180232.1\|36013_36901_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_155326283.1\|37101_37800_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A2K9L2L9	Tupanvirus	3.1e-06	32.0
WP_155326376.1\|38067_38760_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155326284.1\|38919_39651_+	ZIP family metal transporter	NA	NA	NA	NA
WP_173180234.1\|39687_39915_+	DUF1858 domain-containing protein	NA	NA	NA	NA
WP_155326286.1\|39946_40975_+	hypothetical protein	NA	NA	NA	NA
WP_155326287.1\|41054_41660_+	CBS domain-containing protein	NA	NA	NA	NA
WP_155326288.1\|41672_42209_+	HPP family protein	NA	NA	NA	NA
WP_155326289.1\|42250_43429_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_155326290.1\|43504_45151_+	hydroxylamine reductase	NA	NA	NA	NA
WP_155326291.1\|45325_46438_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_173180236.1\|46434_49557_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.9e-71	23.2
47982:47998	attR	NA	NA	NA	NA
WP_155326293.1\|49715_50255_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_155326294.1\|50251_53221_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	64.1
WP_155326295.1\|53223_53784_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.9e-51	90.2
WP_155326296.1\|53989_54268_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2L1IV28	Escherichia_phage	3.3e-20	48.9
WP_155326297.1\|54279_54567_+	HigA family addiction module antidote protein	I6ZVM3	Aeromonas_phage	3.4e-12	45.1
WP_155326298.1\|54684_55524_-	hypothetical protein	NA	NA	NA	NA
WP_155326299.1\|55596_55944_-	hypothetical protein	NA	NA	NA	NA
WP_155326300.1\|56023_56590_-	hypothetical protein	NA	NA	NA	NA
WP_155326301.1\|56642_57233_-	hypothetical protein	NA	NA	NA	NA
WP_155326302.1\|57507_57777_+	hypothetical protein	NA	NA	NA	NA
WP_155326303.1\|57996_58437_+	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_155326304.1\|58812_59067_-	hypothetical protein	NA	NA	NA	NA
WP_155326377.1\|59961_63075_-	DNA polymerase III subunit alpha	A0A291AVA6	Streptomyces_phage	6.2e-99	28.3
WP_155326306.1\|64263_65070_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_155326307.1\|65104_65737_-	repressor LexA	A0A2K9V3G4	Faecalibacterium_phage	6.9e-13	37.1
WP_155326378.1\|65862_66054_+	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	NA	NA	NA
WP_173180238.1\|66310_67693_-	phosphoribosyltransferase	NA	NA	NA	NA
WP_155326309.1\|67843_68248_-\|transposase	IS200/IS605 family transposase	W0UUZ0	Sulfolobus_monocaudavirus	5.0e-17	35.9
WP_155326310.1\|68377_68845_-	hypothetical protein	NA	NA	NA	NA
WP_155326311.1\|68892_73788_-	Ti-type conjugative transfer relaxase TraA	A0A0C5AUY4	Spodoptera_frugiperda_granulovirus	5.5e-09	22.0
WP_155326312.1\|74264_74552_+	mobilization protein	NA	NA	NA	NA
WP_155326313.1\|74908_75349_-	hypothetical protein	NA	NA	NA	NA
WP_173180240.1\|75437_77123_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.5e-14	28.6
WP_155326315.1\|77196_77490_-	antirestriction protein	NA	NA	NA	NA
WP_155320855.1\|77672_79199_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP021876

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP021877

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection