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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP038920 Piscirickettsia salmonis strain Psal-010b plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP038922 Piscirickettsia salmonis strain Psal-010b plasmid unnamed4, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP038921 Piscirickettsia salmonis strain Psal-010b plasmid unnamed3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP038918 Piscirickettsia salmonis strain Psal-010b chromosome, complete genome 2 crisprs DinG,cas3,DEDDh 0 0 37 0
NZ_CP038919 Piscirickettsia salmonis strain Psal-010b plasmid unnamed1, complete sequence 0 crisprs NA 0 0 7 0

Results visualization

1. NZ_CP038922
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3344 : 19366 21 unidentified_phage(35.71%) integrase,capsid,tail,transposase,terminase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP038921
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 32440 : 46236 18 Moraxella_phage(18.18%) tail,transposase,head,capsid NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP038918
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038918_1 1537892-1538002 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038918_2 2097206-2097301 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 31805 : 91882 53 Staphylococcus_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_2 123280 : 241348 105 Staphylococcus_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_3 315151 : 357798 54 Chrysochromulina_ericina_virus(20.0%) transposase NA
DBSCAN-SWA_4 375816 : 425499 55 Staphylococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_5 451571 : 499710 42 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_6 504514 : 559197 52 Streptococcus_phage(22.22%) transposase NA
DBSCAN-SWA_7 590988 : 724382 111 Staphylococcus_phage(13.64%) plate,tRNA,transposase NA
DBSCAN-SWA_8 733024 : 779340 52 Staphylococcus_phage(21.43%) transposase,plate NA
DBSCAN-SWA_9 787500 : 841811 49 Prochlorococcus_phage(33.33%) protease,tRNA,transposase NA
DBSCAN-SWA_10 885491 : 948278 53 Staphylococcus_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_11 952180 : 1019143 57 Bacillus_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_12 1024756 : 1087283 57 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_13 1095983 : 1145552 39 Acinetobacter_phage(25.0%) transposase NA
DBSCAN-SWA_14 1170275 : 1226669 52 Staphylococcus_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_15 1242911 : 1290636 42 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_16 1314455 : 1355665 37 Enterobacteria_phage(16.67%) transposase NA
DBSCAN-SWA_17 1386882 : 1435781 40 Bacillus_thuringiensis_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_18 1440079 : 1508970 60 Staphylococcus_phage(20.0%) transposase NA
DBSCAN-SWA_19 1517691 : 1625645 104 Staphylococcus_phage(21.74%) protease,integrase,tRNA,transposase attL 1506542:1506601|attR 1576967:1577577
DBSCAN-SWA_20 1683980 : 1774295 82 Burkholderia_phage(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_21 1784994 : 1835479 46 Vibrio_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_22 1897772 : 1913088 15 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_23 1941761 : 1990633 43 uncultured_Mediterranean_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_24 1995064 : 2043931 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_25 2063631 : 2113166 41 Burkholderia_virus(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_26 2127735 : 2187288 60 unidentified_phage(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_27 2206350 : 2254573 41 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_28 2267422 : 2328390 47 Staphylococcus_phage(30.0%) integrase,transposase attL 2275275:2275334|attR 2325696:2326456
DBSCAN-SWA_29 2349232 : 2376885 28 Staphylococcus_phage(25.0%) protease,transposase NA
DBSCAN-SWA_30 2416129 : 2488069 53 Staphylococcus_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_31 2498801 : 2543593 44 Burkholderia_virus(33.33%) tRNA,transposase NA
DBSCAN-SWA_32 2553314 : 2604728 55 Bacillus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_33 2614022 : 2732483 108 Staphylococcus_phage(29.63%) tRNA,transposase NA
DBSCAN-SWA_34 2770261 : 2823290 45 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_35 2837856 : 2875043 36 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_36 2890796 : 2949331 52 Lake_Baikal_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_37 3077013 : 3142262 56 Hokovirus(14.29%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP038919
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 118633 123 Streptococcus_phage(39.22%) transposase,integrase,terminase,portal attL 11253:11312|attR 118999:120734
DBSCAN-SWA_2 124580 : 126202 3 Acinetobacter_phage(50.0%) transposase NA
DBSCAN-SWA_3 132572 : 134990 2 unidentified_phage(50.0%) transposase,portal NA
DBSCAN-SWA_4 139708 : 146676 7 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_5 152711 : 153446 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_6 156663 : 161656 5 Streptococcus_phage(66.67%) transposase NA
DBSCAN-SWA_7 168020 : 173923 9 Staphylococcus_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage