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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP038930 Piscirickettsia salmonis strain Psal-013 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP038928 Piscirickettsia salmonis strain Psal-013 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 7 0
NZ_CP038927 Piscirickettsia salmonis strain Psal-013 chromosome, complete genome 2 crisprs DinG,cas3,DEDDh 0 0 34 0
NZ_CP038929 Piscirickettsia salmonis strain Psal-013 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP038931 Piscirickettsia salmonis strain Psal-013 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP038930
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3402 : 19424 21 unidentified_phage(35.71%) head,integrase,tail,capsid,terminase,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP038928
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 41340 45 Streptococcus_phage(34.78%) terminase,transposase,portal NA
DBSCAN-SWA_2 45476 : 50247 7 Vibrio_phage(25.0%) NA NA
DBSCAN-SWA_3 56486 : 113323 54 Streptococcus_phage(54.17%) integrase,transposase,portal attL 72798:72857|attR 112440:113360
DBSCAN-SWA_4 119273 : 120895 3 Acinetobacter_phage(50.0%) transposase NA
DBSCAN-SWA_5 127679 : 130097 2 unidentified_phage(50.0%) transposase,portal NA
DBSCAN-SWA_6 134815 : 141783 7 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_7 150650 : 156541 9 Staphylococcus_phage(25.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP038927
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038927_1 1542826-1542936 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038927_2 2112732-2112827 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 31805 : 68058 29 Staphylococcus_phage(60.0%) transposase NA
DBSCAN-SWA_2 124813 : 243982 106 Staphylococcus_phage(11.76%) protease,tRNA,transposase NA
DBSCAN-SWA_3 318065 : 360424 54 Chrysochromulina_ericina_virus(20.0%) transposase NA
DBSCAN-SWA_4 378442 : 428125 54 Staphylococcus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_5 499051 : 546019 44 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_6 585525 : 719485 109 Staphylococcus_phage(13.64%) plate,tRNA,transposase NA
DBSCAN-SWA_7 728127 : 774434 52 Staphylococcus_phage(21.43%) plate,transposase NA
DBSCAN-SWA_8 782594 : 839323 51 Prochlorococcus_phage(30.0%) protease,tRNA,transposase NA
DBSCAN-SWA_9 886410 : 949287 52 Staphylococcus_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_10 953189 : 1020152 57 Bacillus_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_11 1025765 : 1087507 51 Burkholderia_virus(18.18%) transposase NA
DBSCAN-SWA_12 1098543 : 1164241 56 Escherichia_phage(23.08%) transposase NA
DBSCAN-SWA_13 1174087 : 1216314 41 Staphylococcus_phage(28.57%) transposase NA
DBSCAN-SWA_14 1228138 : 1288788 56 Staphylococcus_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_15 1294199 : 1360599 56 Staphylococcus_phage(20.0%) transposase NA
DBSCAN-SWA_16 1391816 : 1440715 39 Bacillus_thuringiensis_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_17 1445013 : 1631931 167 Staphylococcus_phage(19.51%) protease,tRNA,integrase,transposase attL 1552681:1552740|attR 1580434:1581191
DBSCAN-SWA_18 1690554 : 1781157 82 Burkholderia_phage(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_19 1791856 : 1842341 46 Vibrio_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_20 1912722 : 1989258 64 uncultured_Mediterranean_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_21 1996415 : 2059457 55 Klosneuvirus(18.18%) transposase,tRNA NA
DBSCAN-SWA_22 2079157 : 2128980 42 Burkholderia_virus(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_23 2143549 : 2185307 40 unidentified_phage(18.18%) protease,transposase,tRNA NA
DBSCAN-SWA_24 2191367 : 2256706 57 Burkholderia_virus(16.67%) tRNA,transposase NA
DBSCAN-SWA_25 2263511 : 2392432 104 Staphylococcus_phage(23.08%) integrase,protease,transposase attL 2290822:2290881|attR 2341243:2342003
DBSCAN-SWA_26 2431479 : 2464928 23 Burkholderia_virus(33.33%) tRNA,transposase NA
DBSCAN-SWA_27 2500379 : 2553050 52 Burkholderia_virus(33.33%) tRNA,transposase NA
DBSCAN-SWA_28 2562731 : 2612974 50 Bacillus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_29 2627899 : 2660884 32 Staphylococcus_phage(30.0%) tRNA,transposase NA
DBSCAN-SWA_30 2680908 : 2740893 53 Staphylococcus_phage(41.67%) tRNA,transposase NA
DBSCAN-SWA_31 2794407 : 2847448 45 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_32 2862014 : 2899201 36 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_33 2915135 : 2974117 51 Lake_Baikal_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_34 3101799 : 3167048 56 Hokovirus(14.29%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP038929
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 40550 : 48483 8 Moraxella_phage(33.33%) tail,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage