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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP039083 Piscirickettsia salmonis strain Psal-110 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP039084 Piscirickettsia salmonis strain Psal-110 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039086 Piscirickettsia salmonis strain Psal-110 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP039081 Piscirickettsia salmonis strain Psal-110 chromosome, complete genome 2 crisprs DinG,cas3,DEDDh 0 0 37 0
NZ_CP039082 Piscirickettsia salmonis strain Psal-110 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 9 0
NZ_CP039085 Piscirickettsia salmonis strain Psal-110 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP039085
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3402 : 19424 21 unidentified_phage(35.71%) terminase,capsid,integrase,tail,transposase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP039084
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2917 : 16713 18 Moraxella_phage(18.18%) head,transposase,capsid,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP039082
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 42185 39 Streptococcus_phage(53.85%) transposase,integrase attL 15447:15506|attR 36451:36740
DBSCAN-SWA_2 48424 : 53195 7 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_3 57331 : 119132 61 Streptococcus_phage(41.18%) transposase,integrase,portal,terminase attL 78607:78666|attR 118249:119169
DBSCAN-SWA_4 125082 : 126704 3 Acinetobacter_phage(50.0%) transposase NA
DBSCAN-SWA_5 133200 : 135618 2 unidentified_phage(50.0%) transposase,portal NA
DBSCAN-SWA_6 140336 : 147304 7 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_7 153339 : 154074 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_8 157284 : 162277 5 Streptococcus_phage(66.67%) transposase NA
DBSCAN-SWA_9 168641 : 174544 9 Staphylococcus_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP039081
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP039081_1 1532291-1532401 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP039081_2 2091575-2091670 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 31805 : 91601 52 Staphylococcus_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_2 123725 : 241661 105 Staphylococcus_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_3 316578 : 358937 54 Chrysochromulina_ericina_virus(20.0%) transposase NA
DBSCAN-SWA_4 376955 : 426638 54 Staphylococcus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_5 497564 : 544532 44 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_6 584038 : 717432 111 Staphylococcus_phage(13.64%) plate,tRNA,transposase NA
DBSCAN-SWA_7 726074 : 772391 51 Staphylococcus_phage(21.43%) transposase,plate NA
DBSCAN-SWA_8 780551 : 834862 49 Prochlorococcus_phage(33.33%) protease,tRNA,transposase NA
DBSCAN-SWA_9 878542 : 941090 53 Staphylococcus_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_10 944992 : 1011955 56 Bacillus_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_11 1017568 : 1080105 57 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_12 1088805 : 1138373 39 Acinetobacter_phage(22.22%) transposase NA
DBSCAN-SWA_13 1163096 : 1219490 51 Staphylococcus_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_14 1235732 : 1283457 42 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_15 1307276 : 1348486 37 Enterobacteria_phage(16.67%) transposase NA
DBSCAN-SWA_16 1379703 : 1433437 46 Bacillus_thuringiensis_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_17 1452372 : 1501791 46 Staphylococcus_phage(23.08%) transposase NA
DBSCAN-SWA_18 1510512 : 1620044 106 Staphylococcus_phage(21.74%) transposase,integrase,protease,tRNA attL 1499363:1499422|attR 1571366:1571976
DBSCAN-SWA_19 1678379 : 1768694 82 Burkholderia_phage(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_20 1779393 : 1829878 46 Vibrio_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_21 1892141 : 1907457 15 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_22 1936130 : 1985002 43 uncultured_Mediterranean_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_23 1989433 : 2038300 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_24 2058000 : 2107535 41 Burkholderia_virus(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_25 2122104 : 2181657 60 unidentified_phage(14.29%) transposase,protease,tRNA NA
DBSCAN-SWA_26 2200719 : 2248942 41 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_27 2261791 : 2322759 47 Staphylococcus_phage(30.0%) integrase,transposase attL 2269644:2269703|attR 2320065:2320825
DBSCAN-SWA_28 2343601 : 2371254 28 Staphylococcus_phage(25.0%) protease,transposase NA
DBSCAN-SWA_29 2410499 : 2482439 53 Staphylococcus_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_30 2493171 : 2548800 53 Burkholderia_virus(28.57%) transposase,tRNA NA
DBSCAN-SWA_31 2552795 : 2598810 50 Bacillus_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_32 2608104 : 2671906 57 Staphylococcus_phage(38.46%) tRNA,transposase NA
DBSCAN-SWA_33 2681408 : 2726565 41 Staphylococcus_phage(21.43%) tRNA,transposase NA
DBSCAN-SWA_34 2764343 : 2817372 45 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_35 2831938 : 2886199 51 Staphylococcus_phage(37.5%) transposase NA
DBSCAN-SWA_36 2893785 : 2943942 43 Bodo_saltans_virus(14.29%) tRNA,transposase NA
DBSCAN-SWA_37 3071625 : 3136874 56 Hokovirus(14.29%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage