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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP039113 Piscirickettsia salmonis strain Psal-135 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP039114 Piscirickettsia salmonis strain Psal-135 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP039115 Piscirickettsia salmonis strain Psal-135 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039116 Piscirickettsia salmonis strain Psal-135 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039112 Piscirickettsia salmonis strain Psal-135 chromosome, complete genome 2 crisprs DinG,cas3,DEDDh 0 0 36 0

Results visualization

1. NZ_CP039113
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 52409 58 Streptococcus_phage(47.37%) transposase,terminase,portal NA
DBSCAN-SWA_2 57501 : 183403 120 Streptococcus_phage(31.67%) portal,head,integrase,capsid,tail,transposase attL 70525:70584|attR 122790:123304
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP039115
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2917 : 16713 18 Moraxella_phage(18.18%) capsid,transposase,head,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP039116
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3315 : 19337 21 unidentified_phage(35.71%) transposase,capsid,integrase,head,terminase,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP039112
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP039112_1 1537433-1537543 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP039112_2 2096747-2096842 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 31805 : 91594 52 Staphylococcus_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_2 123076 : 241144 105 Staphylococcus_phage(12.5%) protease,transposase,tRNA NA
DBSCAN-SWA_3 314947 : 357306 54 Chrysochromulina_ericina_virus(20.0%) transposase NA
DBSCAN-SWA_4 366729 : 421642 59 uncultured_Caudovirales_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 451079 : 499218 42 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_6 504022 : 558705 52 Streptococcus_phage(22.22%) transposase NA
DBSCAN-SWA_7 590496 : 723890 111 Staphylococcus_phage(13.64%) transposase,plate,tRNA NA
DBSCAN-SWA_8 732532 : 778848 51 Staphylococcus_phage(21.43%) transposase,plate NA
DBSCAN-SWA_9 787008 : 841319 49 Prochlorococcus_phage(33.33%) protease,transposase,tRNA NA
DBSCAN-SWA_10 884999 : 947519 53 Staphylococcus_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_11 951421 : 1018384 56 Bacillus_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_12 1023997 : 1086524 58 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_13 1095224 : 1144792 39 Acinetobacter_phage(22.22%) transposase NA
DBSCAN-SWA_14 1169515 : 1226210 51 Staphylococcus_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_15 1242452 : 1290177 42 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_16 1313996 : 1355206 37 Enterobacteria_phage(16.67%) transposase NA
DBSCAN-SWA_17 1386423 : 1440157 45 Bacillus_thuringiensis_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_18 1459092 : 1508511 45 Staphylococcus_phage(23.08%) transposase NA
DBSCAN-SWA_19 1517232 : 1576803 57 Staphylococcus_phage(25.0%) protease,transposase,integrase,tRNA attL 1506083:1506142|attR 1576508:1577118
DBSCAN-SWA_20 1582255 : 1625186 41 Staphylococcus_phage(20.0%) transposase NA
DBSCAN-SWA_21 1683521 : 1773836 82 Burkholderia_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_22 1784535 : 1835020 46 Vibrio_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_23 1897313 : 1912629 16 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_24 1941302 : 1983059 39 uncultured_Mediterranean_phage(40.0%) transposase,tRNA NA
DBSCAN-SWA_25 1987402 : 2043472 49 Klosneuvirus(22.22%) transposase,tRNA NA
DBSCAN-SWA_26 2063172 : 2112707 41 Burkholderia_virus(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_27 2127276 : 2254114 116 Staphylococcus_phage(14.81%) protease,transposase,tRNA NA
DBSCAN-SWA_28 2266963 : 2327931 47 Staphylococcus_phage(30.0%) integrase,transposase attL 2274816:2274875|attR 2325237:2325997
DBSCAN-SWA_29 2348773 : 2376426 28 Staphylococcus_phage(25.0%) protease,transposase NA
DBSCAN-SWA_30 2415670 : 2543134 106 Burkholderia_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_31 2552855 : 2604269 55 Bacillus_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_32 2613563 : 2732024 107 Staphylococcus_phage(29.63%) transposase,tRNA NA
DBSCAN-SWA_33 2769802 : 2822831 45 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_34 2837397 : 2891658 51 Staphylococcus_phage(37.5%) transposase NA
DBSCAN-SWA_35 2899244 : 2948945 43 Bodo_saltans_virus(14.29%) transposase,tRNA NA
DBSCAN-SWA_36 3076627 : 3141876 55 Hokovirus(14.29%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage