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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP039239 Piscirickettsia salmonis strain BI1 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039237 Piscirickettsia salmonis strain BI1 plasmid unnamed3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039236 Piscirickettsia salmonis strain BI1 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039238 Piscirickettsia salmonis strain BI1 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP039235 Piscirickettsia salmonis strain BI1 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP039234 Piscirickettsia salmonis strain BI1 chromosome, complete genome 0 crisprs csa3,DinG,DEDDh,cas3 0 0 40 0

Results visualization

1. NZ_CP039239
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18294 : 29873 20 Erysipelothrix_phage(18.18%) capsid,head,transposase,portal,protease,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP039237
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7424 : 53649 50 unidentified_phage(35.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP039236
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1560 : 108040 117 Streptococcus_phage(36.59%) integrase,transposase attL 90532:90591|attR 93759:94810
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP039238
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3612 : 41270 50 unidentified_phage(42.86%) integrase,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. NZ_CP039235
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1087 : 91533 116 unidentified_phage(23.26%) transposase,head,tail NA
DBSCAN-SWA_2 96218 : 190947 116 Staphylococcus_phage(14.29%) integrase,transposase attL 134444:134503|attR 163301:164371
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
6. NZ_CP039234
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4062 : 96991 91 unidentified_phage(27.27%) transposase NA
DBSCAN-SWA_2 131633 : 184942 55 Bacillus_phage(22.22%) transposase,protease NA
DBSCAN-SWA_3 196714 : 234171 37 unidentified_phage(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_4 247610 : 305814 57 Acinetobacter_phage(20.0%) tRNA,tail,transposase NA
DBSCAN-SWA_5 311521 : 358948 49 unidentified_phage(33.33%) transposase NA
DBSCAN-SWA_6 368874 : 420599 56 unidentified_phage(50.0%) transposase NA
DBSCAN-SWA_7 447351 : 544934 112 Acinetobacter_phage(13.04%) tRNA,transposase NA
DBSCAN-SWA_8 566093 : 662619 106 unidentified_phage(38.46%) transposase NA
DBSCAN-SWA_9 669439 : 718858 50 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_10 734665 : 787272 49 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_11 805314 : 835281 33 Acinetobacter_phage(25.0%) tRNA,transposase,integrase attL 808912:808971|attR 809918:810310
DBSCAN-SWA_12 852987 : 897779 53 unidentified_phage(25.0%) transposase,integrase attL 875142:875201|attR 896769:897469
DBSCAN-SWA_13 900861 : 1070842 177 unidentified_phage(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_14 1085373 : 1140927 51 Bacillus_phage(42.86%) transposase NA
DBSCAN-SWA_15 1157141 : 1201293 45 Acinetobacter_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_16 1216026 : 1251861 37 unidentified_phage(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_17 1267273 : 1331221 59 unidentified_phage(36.36%) tRNA,transposase,protease NA
DBSCAN-SWA_18 1353468 : 1455276 85 Acinetobacter_phage(36.36%) transposase NA
DBSCAN-SWA_19 1472016 : 1590825 117 unidentified_phage(15.38%) tRNA,transposase,protease,integrase attL 1473111:1473170|attR 1534930:1535739
DBSCAN-SWA_20 1598701 : 1703337 108 unidentified_phage(33.33%) tRNA,transposase,integrase attL 1659745:1659804|attR 1695448:1696562
DBSCAN-SWA_21 1708157 : 1736390 30 unidentified_phage(42.86%) transposase NA
DBSCAN-SWA_22 1762324 : 1815672 58 unidentified_phage(28.57%) transposase NA
DBSCAN-SWA_23 1818775 : 1935561 113 Escherichia_phage(11.76%) tRNA,transposase,protease NA
DBSCAN-SWA_24 1943172 : 2000310 52 unidentified_phage(13.33%) tRNA,transposase NA
DBSCAN-SWA_25 2004001 : 2065996 59 Bacillus_thuringiensis_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_26 2077135 : 2192917 106 unidentified_phage(21.05%) tRNA,transposase NA
DBSCAN-SWA_27 2205118 : 2274625 57 uncultured_Mediterranean_phage(26.67%) tRNA,transposase,integrase attL 2204972:2205031|attR 2209896:2209993
DBSCAN-SWA_28 2280443 : 2332771 55 unidentified_phage(18.18%) transposase NA
DBSCAN-SWA_29 2335939 : 2380565 45 unidentified_phage(37.5%) transposase NA
DBSCAN-SWA_30 2392729 : 2566381 175 unidentified_phage(23.08%) tRNA,transposase,integrase attL 2496518:2496577|attR 2529911:2530149
DBSCAN-SWA_31 2579753 : 2747888 172 unidentified_phage(15.62%) tRNA,transposase,integrase,plate attL 2682152:2682211|attR 2690078:2690728
DBSCAN-SWA_32 2755427 : 2813133 56 Acinetobacter_phage(50.0%) tRNA,plate,transposase NA
DBSCAN-SWA_33 2832896 : 2864887 40 Bacillus_thuringiensis_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_34 2872780 : 3062768 214 unidentified_phage(12.82%) tRNA,transposase,protease,integrase attL 2906984:2907043|attR 2917366:2918326
DBSCAN-SWA_35 3084404 : 3148917 74 unidentified_phage(37.5%) tRNA,transposase,protease NA
DBSCAN-SWA_36 3231600 : 3272493 38 unidentified_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_37 3278842 : 3340032 53 unidentified_phage(18.18%) transposase NA
DBSCAN-SWA_38 3345010 : 3393089 55 unidentified_phage(60.0%) tRNA,transposase NA
DBSCAN-SWA_39 3402743 : 3453197 51 Acinetobacter_phage(80.0%) tRNA,transposase NA
DBSCAN-SWA_40 3457968 : 3513764 58 unidentified_phage(42.86%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage