CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046246	Tetragenococcus halophilus strain YJ1 chromosome, complete genome	4 crisprs	DinG,RT,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,cas14j,cas2,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	0	29	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046246_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046246_1

51209-51317

Orphan

Consensus_repeat	Method
TAGTTTTCTTAAAATTTAGAGCTAGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046246_1

>merge|NZ_CP046246|1|51209-51317|CRISPRCasFinder
TAGTTTTCTTAAAATTTAGAGCTAGTCTGGCAAAGTAACTTTAGTTTTCTTAATTTCTAGAGTTAGTCTGACAAAGTAGCTTTAGTTTTCTTAAAATTTAGAGTTAGTC

>NZ_CP046246|1|1|51209-51317|CRISPRCasFinder
TAGTTTTCTTAAAATTTAGAGCTAGTC	TGGCAAAGTAACTTTAGTTTTCTTAATTTCTAGAGTTAGTCTGACAAAGTAGCTT
TAGTTTTCTTAAAATTTAGAGTTAGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046246.1\|WP_155224119.1\|45133_45397_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181490
NZ_CP046246.1\|WP_041591949.1\|48614_49946_+\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
NZ_CP046246.1\|WP_155224122.1\|58620_60081_+\|amidase	unknown	unknown	gnl\|CDD\|180608
NZ_CP046246.1\|WP_061840429.1\|51328_52705_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP046246.1\|WP_155224120.1\|45634_46726_+\|ArgE/DapE-family-deacylase	unknown	unknown	gnl\|CDD\|181490
NZ_CP046246.1\|WP_014124641.1\|61796_62993_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|234948
NZ_CP046246.1\|WP_155224121.1\|55849_58438_-\|vitamin-B12-dependent-ribonucleotide-reductase	unknown	unknown	gnl\|CDD\|236152
NZ_CP046246.1\|WP_103892303.1\|54220_54910_+\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|183656
NZ_CP046246.1\|WP_094243614.1\|43692_44985_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP046246.1\|WP_155224118.1\|42304_43681_+\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|225343
NZ_CP046246.1\|WP_069028863.1\|41368_42151_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP046246.1\|WP_103103717.1\|52701_53913_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP046246.1\|WP_069028875.1\|63227_63551_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP046246.1\|WP_155224794.1\|38878_39106_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178991
NZ_CP046246.1\|WP_155224123.1\|60144_60963_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP046246.1\|WP_061840435.1\|40737_41064_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|369571
NZ_CP046246.1\|WP_061840426.1\|55203_55833_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
NZ_CP046246.1\|WP_061840423.1\|61026_61779_-\|esterase-family-protein	unknown	unknown	gnl\|CDD\|227283
NZ_CP046246.1\|WP_069028867.1\|50087_50849_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP046246.1\|WP_155224117.1\|36250_38218_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919

Protein	Function_ID	Function_description	E-value
NZ_CP046246.1\|WP_155224119.1\|45133_45397_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181490	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed.	7.27233e-17
NZ_CP046246.1\|WP_041591949.1\|48614_49946_+\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP046246.1\|WP_155224122.1\|58620_60081_+\|amidase	gnl\|CDD\|180608	PRK06529, PRK06529, amidase; Provisional.	1.76686e-175
NZ_CP046246.1\|WP_061840429.1\|51328_52705_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP046246.1\|WP_155224120.1\|45634_46726_+\|ArgE/DapE-family-deacylase	gnl\|CDD\|181490	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed.	2.88524e-149
NZ_CP046246.1\|WP_014124641.1\|61796_62993_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|234948	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed.	3.29331e-11
NZ_CP046246.1\|WP_155224121.1\|55849_58438_-\|vitamin-B12-dependent-ribonucleotide-reductase	gnl\|CDD\|236152	PRK08115, PRK08115, vitamin B12-dependent ribonucleotide reductase.	0
NZ_CP046246.1\|WP_103892303.1\|54220_54910_+\|fructose-6-phosphate-aldolase	gnl\|CDD\|183656	PRK12656, PRK12656, fructose-6-phosphate aldolase; Reviewed.	5.56982e-117
NZ_CP046246.1\|WP_094243614.1\|43692_44985_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	2.20767e-124
NZ_CP046246.1\|WP_155224118.1\|42304_43681_+\|family-1-glycosylhydrolase	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	2.02686e-160
NZ_CP046246.1\|WP_069028863.1\|41368_42151_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.76088e-25
NZ_CP046246.1\|WP_103103717.1\|52701_53913_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP046246.1\|WP_069028875.1\|63227_63551_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	4.90066e-20
NZ_CP046246.1\|WP_155224794.1\|38878_39106_+\|hypothetical-protein	gnl\|CDD\|178991	PRK00373, PRK00373, V-type ATP synthase subunit D; Reviewed.	4.45738e-14
NZ_CP046246.1\|WP_155224123.1\|60144_60963_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	6.28921e-37
NZ_CP046246.1\|WP_061840435.1\|40737_41064_-\|cupin-domain-containing-protein	gnl\|CDD\|369571	pfam07883, Cupin_2, Cupin domain. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel).	1.9608e-09
NZ_CP046246.1\|WP_061840426.1\|55203_55833_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	4.14651e-79
NZ_CP046246.1\|WP_061840423.1\|61026_61779_-\|esterase-family-protein	gnl\|CDD\|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	1.28657e-90
NZ_CP046246.1\|WP_069028867.1\|50087_50849_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	5.09637e-43
NZ_CP046246.1\|WP_155224117.1\|36250_38218_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0

>NZ_CP046246.1|WP_069028867.1|50087_50849_+|MurR/RpiR-family-transcriptional-regulator
MSIEALINEHYDYLNENDQHISQYIIKHEEECKRLSITQLAEATLTSKSSILRFTQKLGLSGYSEFKYALKQQHTYRKEESSFVAMQQEDLLQTAKLFNQQNIIPALQTFDQAKSIYCYGTGWGQRDVLQSFIRSVIPLQRFPIHLQSQKELSLVLNGSITEKDLMIILSLSGENKPQENVLNRMKLKNIPILSITNMSRNRLASKATYNLYYQSTEIGQSSDEIFSMMPLFQIMDLFYRAYVDYKQIDLEQL
>NZ_CP046246.1|WP_041591949.1|48614_49946_+|6-phospho-alpha-glucosidase
MKKQSIVVAGGGSTFTPGIVMMLLENLDKFPIRSLKFYDNDKERQKQIADATEVIIKERAPEIEFKATTDPEEAFTDVDFVMAHIRVGKYAMREKDEKIPMKYGVIGQETCGPGGIAYGMRSIPGVLEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNSKIINICDMPVGIEIRMAEVLGLASRKDMEVRYYGLNHFGWWTDIRDKDGNDLMPQLTDWVKEHGYITPKELEAGTDEEPSWEYTFGKAKEVQWLDPNTLPNTYLKYYFYPQDEAEHSDINYTRANEVMDNREKHVFSECNRISNIKTAEDAKLVADDHASYIVDLARAIAYNTKERMLLIVPNHGAVENFDSEGMVEVPCIVGSQGAEPMTQGSIPRFQKGLMEQQVAVEKLVVDAWATKSYQKLWQALTLSRIVPNARVAKQILDDLIEANKEYWPELK
>NZ_CP046246.1|WP_155224120.1|45634_46726_+|ArgE/DapE-family-deacylase
MLPFGDNRANLVATLGQGHPVLTVSGHMDVVEVDKENWATDPFKLVEKDDMFYGRGVTDMKAGLAALVIAMIELKEAGTQLNGTIKLLATGGEEVGQPGAEKLTEQGYMKDVDALLIAEPSGYRCVYANKGELNITIDSKGQAAHSSMPKAGVNAVEHLLHVLNTIENKVKQATDGIENEVLGDTVFNIDVIHGGNQINAIPASAQAQINMRTIPEFTNDQLESIFKETIADYNQDTDAQIDYTVTMNTIAITGNKDSSLIRLIQKIGTPYLQNQGMSEEEIKQAKKSAELTGMKFSADEILTMGVSGGTDGSKFLINQPNGFDYTMFGPGNDTMHKDNESLSKPMYFDYIEMYKQLFSQYLK
>NZ_CP046246.1|WP_155224119.1|45133_45397_+|M20/M25/M40-family-metallo-hydrolase
MSAEEIKAAENSAKLMGMKFSSEEILTMGMSAGTDGSKFLIDQPNGFDYAMFGPGNDTMHKDNESLSKAMYFDFIEIFKQLFTEYLS
>NZ_CP046246.1|WP_094243614.1|43692_44985_+|PTS-sugar-transporter-subunit-IIC
MNSKFMDKFVEMASKIGNQVHLRSLRDAFATIIPMFILAGLAVLINNVLFPFIFSGETLAVAQDFGNSINNGTLNIAGLLLCPTIAYFLSSNKGFANPISAAVVSLATYITIMPLAVEVPFNEDTIETTGALTYANLGTEAMFVGIIIGLLATELLLSLNKSKALQINLGEQVPPAVSKSFSTMLPAIITVSLFAALSLLLQITVNMDLITLIVTLIQQPLRSVGTSLIGWLFLYSFGNLLFTFGIHQSVINGPFTEPFLTQNINENMIAYSQGTEPPNILTISFQTSFAQMGGTGATFCLLIAILIFSRMKPYREVAKLSLAPGLFEINEPMIFGLPIVFNIPMIIPFVIVPIVQALIAYVVTAIGLVSKTVVFIPWVTPPVISGYLATAGDWRAPILQILLIAIGVMIYLPFLKVSERVLKRQAEMNS
>NZ_CP046246.1|WP_155224118.1|42304_43681_+|family-1-glycosylhydrolase
MKLREDFYWGNSVSSMQTEGAWNEGGKGKSVYDTREASENASDWKVATDSYHRYLEDFDYMQDLGMNMYRFQISWSRVNPAGNGEWNEEGIAFYDQFIDELISRGIEPMICLYHFDMPLHLAETYNGFICKEVVDAFVRYGKEMVDRFGHKVKHWLTFNEQNIFSMPEESFIVSGYLTGEKTLEKLYQIQHNTMVCHASIANYIHETTDAQISGMLAYQEVYPATSHPEDVRLARELDEFMNHHYLEMYTYGKRSDSYLQFIKNRQFDLAITENELAEISKLRSDYLTFSYYSSTTIDHKLVPQSAAPNEYIQFGKKDNPYIDTTEWNWQIDPNGFRDILNKIYQRYNLPVFPIENGIGVIEEWNGKDPIEDDYRIDYHKEHLLALLRAVNEDGVEVLGYLGWGLIDILSSQGDMRKRYGVVYVNRENHDLKDLKRVPKKSYDWFKKVIQTNGDYLLK
>NZ_CP046246.1|WP_069028863.1|41368_42151_-|MurR/RpiR-family-transcriptional-regulator
MSGGLILSLQDILNHYQTKDTEYLIAQYLLKNLYQKTITITDIAKSCHLSEASVTRFAKKLGYTGFSEFKKDYFLIQLEENELELDLLARNEKQSTSQLLLNELQTVGQEFHAFIDNFDAKQVEKVSNKIHECRRVYLFSTLIPGNITMVLQTILLNCGKEAIYPVDNRKQHEIIPQLEKNDLAIVVSLEGSLVMQKDLTLSIINSKASNILITQNSHMKLSSLFDTVVTLGDHDLERTGKYKLLAFVELLGNYYILKNK
>NZ_CP046246.1|WP_061840435.1|40737_41064_-|cupin-domain-containing-protein
MHLKPTLKSNINHFFDPTNQPNSNVTMGLITLQPGEKHPKQGYSYHKQDEFSYIISGLAHTILENGEDILGKAGDAQLIEKNEGHINYNDSKEPAVVVWFLVERKEEK
>NZ_CP046246.1|WP_155224794.1|38878_39106_+|hypothetical-protein
MEKTRRRVNTLEYMTISELEETIYYIRMKLEEDERAGVTRMIKVKICEMIKQYKKLRSDEKCLSAIFYFKFLRRT
>NZ_CP046246.1|WP_155224117.1|36250_38218_+|PTS-transporter-subunit-EIIC
MSKDNYDELARDIIDHVGGEENVAGVRHCITRLRFNLKDENKADTDYLKNRDGVVTVMKSAGQYQVVIGEQVAEVYEAIVNQTSIGGDTSASETSEGGNENDNRNVLDKFIDFISGVFQPFLMALAATGMIKGLVALLGTVGVDPESGVYQVLNFAGDGFFQFLPVMVAITAARKLKMNEFTALAIAVAFLHPEINNLMTGDVMYTLFSGTAFESPIYSTFLGIPIIMPPNGYYSAIIPILVSVWLGSVVEKWIKNIIPSVVRSFLTPFFTVMIVFVISLIVIGPIANWASALVGQFFLVVQGFSPLLFGALLAVAWQLLVIFGLHWGIVPIMFILLAEQGYESIGPAMVSSTFGVLGVVIALLIKSKAKKVRDIALPGAISLVFGVSEPTIYGLMLPMKRSFLYALIGNAVGGAYIGAMSVVGYRTGGLGVFSIFNTINPSGSLDMNFWNVIIGFTLCTVVGFVLQMMFPVPSIDGNGNEGQSENIKSDEQGLASKEELQESAKEDIIASPMQGQLVPMSEVSDEVFSSEALGKGVAIKPEIGEVRAPANGIISTLFPTGHAVGMTTDEGTEILIHIGLDTVELEGKYYEISAEQGQQVKAGDLLIKFDKEGVESENYDTITPVVITNSAEFQTIDVTEETQVTPGDYLLTAVK
>NZ_CP046246.1|WP_061840429.1|51328_52705_-|argininosuccinate-lyase
MKKLWSGRFTGENEDWVDTFGASISFDYQMAKQDILGSLAHVKMLGHCGIISEDERQQIKAGLKSLQEKLDRNELTFTIQNEDIHLNIEVLLYEEIGPVAGKLHTARSRNDQVATDMHLYLKETVALIIKKIHQLRNVLVDKAEENIETIMPGYTHMQHAQPISFGHHLLAYYQMLTRDQERMQESLSRIDVSPLGTAALAGTTFPIDRQMTADELGFSDIYDNSLDAVSDRDFILEFLNNASLLMMHLSRFCEEIISWSSYEFQFVELTDTFSTGSSIMPQKKNPDMAELVRGKTGRVYGNLTQLLTVMKSLPLAYNKDFQEDKEGMFDTSETVITSLEIMSDMIKTMKINTTNMQQATEKDFSNATELADYLANKGIPFRQAHEIVGKLVLECIQQGSYLQDIPLKKYQEISSVIEADVYDKLSATTAVKSRNSAGGTGFDQVKAQIEKARKELQN
>NZ_CP046246.1|WP_103103717.1|52701_53913_-|argininosuccinate-synthase
MKEKVVLAYSGGLDTSVSVRWLTDQGYDVVACCLDIGEGKDIQAIRDKALMVGASQSYAIDAKEEFLQDFALIALQGNTLYENSYPLVSALSRPLIAKKLVELAQQTNAKTIAHGCTGKGNDQVRFEVAIAALDPTLKVIAPVRQWQWSREEEIAYAQANDVPIPADLDNPYSIDQNLWGRACECGALEDPWATPPEGAYNLTNELSNTPDDPDIIELTFEKGVPTAINGEKMNLTTITSTLNTLAGKHGIGRIDHVENRLVGIKSREVYECPAALTMIHAHKELEDLVFVRELAHVKPIIENQLAQTIYDGLWFNPLNEALIAFVKSTQKDVNGIVRLKLFKGNIICEGKKSSNSLYNENLATYTSADTFDQEAAVGFIKLWGFPSKVYAEVQAQENKEDIE
>NZ_CP046246.1|WP_103892303.1|54220_54910_+|fructose-6-phosphate-aldolase
MEILLDTANIETIKKYETILPLAGVTTNPSIIKKEGKIDFFAHMKAIREVIGEKRSLHIQVVAKDKVGMLKDVEAILEQLGREIYFKIPVSSEGLNVIKTLKKEGLNVTATAIYTKFQAYLAIAAGADYIAPYFNRMENLNIDAREAMKAMADEIQASNSQTKIVAASFKNVGQVTTALEQGAQAVTIAPDIIAQALAMPSIAQAVDDFTGDWESIFGENSTIADLNES
>NZ_CP046246.1|WP_061840426.1|55203_55833_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MQIYTRTGDQGTTKLIGGFEVTKDDPRIEAYGTIDELNSLVGYIASLPELTANFKEELVYIQHYLFDCGNDLATPTFKEIGKISPRTRNASDPLYPYVVKKEDIEWLEARIDFYADIPAEINYFILPGGTPESAQLHMARTVARRAEREIVSFQKQGQVNPFALKFVNRLSDYFFALARVVNSQAGTEDIRYERSKKVFHTDLTKDDIQ
>NZ_CP046246.1|WP_155224121.1|55849_58438_-|vitamin-B12-dependent-ribonucleotide-reductase
MSVQIKEPELDIEKLNQDIKQFPQVSPITDDMYTTRQGVSRLVMLDRYAYKDVQQRTLAVGDLIVLTVKSDPNYPARGVGIVQKIDDQQQEADILVEEAYRFSIEDPDEQALGIVTRNLNEIDKPLEVFYEQITKRVAHALADVDQTIGSKTMIEEGFYQQLKEMNFVPAGRVLYGAGSGANVTYFNCYVMPFVPDSRSGIAEHRKKVMEIMSRGGGVGSNGSALRPRNAIVRGVNGKSSGSVSWLDDIAKLTHLVEQGGSRRGAQMIMLADWHPDIIEFIVSKMQNARILRYLLENTNDSQIKQAVHEKLNFTPLLQSEHEMYQFIANQENQTEAVSSATIKEAQTKLNDGGTYSVNNPEFLSGANISLTLTDDFMQAVKNNEEWPLRFPDLFNYSQEEMDDYDNKWPEIGDVRQWEDLGYQVATYRTIKARELWKLINICATYSAEPGIFFIDNANNKTNAIAYGQKVVATNPCGEQPLAPNSVCNLGAINLANMANKDTAEVDYDKLMETVKIAVQMQDDVIDSTPYFLEENKKQALGERRVGLGVMGLADLLIYTHHRYGSKEGNHVVDKIFETIATTAYRESIRLAKLKGSFPFLIGETEEETQKLRQRFIQTGYMKDMPQDIREDVLAHGIRNSHLLTVAPTGSTGTMVGVATGLEPYFAFKYYRSGRLGKFMEVNAEIVQEYLNEHPESDASHLPEFFVSSMELAPEEHVDVQTTIQRWVDSSISKTVNAPKGYTVEQVATIYERLYDGNAKGGTVYVDGSRDSQVLTLQSEKETEKQTSLFETEDIRIVDDSDELEQLVEQAENDHIQQEGHTDDVIYGSDVGNTCTICRQGIVKDIGGCNTCTNCQAQLRCGL
>NZ_CP046246.1|WP_155224122.1|58620_60081_+|amidase
MIHDALYWAEQLKKQKISFEELLTLIENRVEKDNQKINALVTFAKEDAKKQYEASKNIEKSPFAGLPLPLKMLGQDKKGWLSTAGSHLLKTNRAPVSNHFVQALETAGLIPLGQTNAPEFGFKNVTDPTLYGNTRNPWNLDYSPGGSSGGAAASVASGMFPLAAASDGGGSIRIPASFSGLIGLKPTRGTMLVGPAGFRAWQGASISFALNVSMRDTKTLFYAIRGTEKAAPYQAPKVEWEHTRSANKKGLKIAFVTTSPVDSEVSEEAMTAVKNAVSFLTKEGHRIEEISLPIEGKKLMQSYYHMNGAETAAMIEELSYNLARPIEKEDMELMSWGLYQYGMKQSAASYIHNLNTWDQAAAQMEELFENYDLLLTPTTAYSAPKITDDLQSNTIRTQLAQIQNYSLKQAGDLVYEMFDKSLRFSPFTQLANLTGQPAISLPTHLTNEGLPLGIQFMAAKGREDLLFEVGELFENNQQFHLPAYYQ
>NZ_CP046246.1|WP_155224123.1|60144_60963_+|alpha/beta-hydrolase
MNSDYLALHEHSLEVPYMQEKRRVRVLLPSNYESGTTHYPVVYMHDGQNIFFSRESYSGYSWKLIPLLKKSENLPPVIIVGIDNSEEKRFDEYMPWGISVEDEEQKISAGGMGKDYAKWLVETVKPFIDKHYRTKKERKDTILAGSSLGAVITAYTGAAYPDTFGGLGIFSLASWLCEEAFINYLSANPINSKSKVYIQSGTNEGNEEDQMLTTKDTDQAYIDSSIRYYNTLLGNGHDLDNLSLRIFSGEYHFEKYWAEHFGEFLAFAFNVD
>NZ_CP046246.1|WP_061840423.1|61026_61779_-|esterase-family-protein
MHFEQRSFYSNQLEKEMPFNVYGHAGKAVLVFPSSGGSQNEYADFGMIASCSSFIEKGLLRFYTAASYDNESWLANNKSPHEMAEAHRCYENYIIQELIPLITYETNSPQVIATGCSMGGFHTLNFALKHPDIFTTAIALSGVYDIRFFTGDYYNDLAVYFNSPIDYLPSLKDPWFIDRYRQNTYITCVGQGDWELPHLLQTKNLQKIFEAKELPAWFDYWGEDSAHDWQWWSKQIVYFMNELNKQKTLI
>NZ_CP046246.1|WP_014124641.1|61796_62993_-|ATP-grasp-domain-containing-protein
MKQPKNFIIISPHFPENFSTFAVCLRERGFNTLGIADIAYDQLSDTLKNALTEYYRVDDMNDYDQMYRAVAFFAHKYGRIDRIESHNEHWLELDAQLRTDFNVVGYNLTDLEPIKKKSSMKKQFRMLDLPVAEGRVFSDEEDAFFLAEELGYPVIVKPDSGVGAGDTYKIKSPDELTKLFNENDMTNDFIMEEFIPGDVVTFDGLCDQEGQIVFYSSLDYNIAVLETVENDSDMYFYLPREIPEDLIEMGSKIVEGFQVKERFFHFEFFRTYPNSELLPLEVNMRPPGGPTIDMFNYVNEFNIFAEYANIVKENQFKAPINRLYNCAYISRKANKIFNYTHDNEAIRQKLGESLVGIQSIPDIFSTILGTEGYIVRCPELEELFDHINYISQRQEAVS
>NZ_CP046246.1|WP_069028875.1|63227_63551_+|PadR-family-transcriptional-regulator
MSIRSQLLKGILEGCILALLDRQVVYGYELSVKLQSYGLFVSEGSIYPILLRLQKEQLITGEMKKSPAGPNRKYYYLTKEGTKALVDFKANWETIKLPVDRLLDKEE

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Crispr_ID: NZ_CP046246_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046246_2

513280-517286

TypeI-E

Consensus_repeat	Method
GGATCACCCCCGCTTATGCGGGAAAGAC	CRISPRCasFinder
GGATCACCCCCGCTTATGCGGGAAAGAC	CRT
GGATCACCCCCGCTTATGCGGGAAAGAC	PILER-CR
GGATCACCCCCGCTTATGCGGGAAAGAC	PILER-CR

65 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP046246_2

>merge|NZ_CP046246|2|513280-517286|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GAATCACCCCCGCTTATGCGGGAAAGACGATCGCCAGCCATTGACTTGAGACCCTTCATAAGGATCACCCCCGCTTATGCGGGAAAGACCTGATATAAGATAGCCAATCGTAACCATTGATGGGATCACCCCCGCTTATGCGGGAAAGACATGGTCTGATATAAAAGCTAATACATCTAGCAAGGATCACCCCCGCTTATGCGGGAAAGACGCTTGTTCATTCGAGGTCGTAGAACGATTGTCAGGATCACCCCCGCTTATGCGGGAAAGACTGTTGTGTGCTAGCAGATTGGCCACCGCCACTAGGATCACCCCCGCTTATGCGGGAAAGACGGATGCGCAGGCAACACAGGCACATCATCAATGGGATCACCCCCGCTTATGCGGGAAAGACTTAGCAAGTTTAGTCAGGAAGGGAGTGTTGTAGGGATCACCCCCGCTTATGCGGGAAAGACGTAACGCAATCAAGTCCGCATCATCATAGCTAGGGATCACCCCCGCTTATGCGGGAAAGACCCTTGTTTAAAGTCTATGCTCTCGCCTTTGCTAGGATCACCCCCGCTTATGCGGGAAAGACTTAGTCAGAGCATAGGTATTATGCGCGGAACAGGGATCACCCCCGCTTATGCGGGAAAGACAAAAGCCAACCCTCTTTCGTTAAATTTCGCGCGGGATCACCCCCGCTTATGCGGGAAAGACTTAAAATCTTTAATTTGTAAATCAACATTACCGGGATCACCCCCGCTTATGCGGGAAAGACTCGAAGAAGATAGAAGCACGAGAGTGACATCCAAGGATCACCCCCGCTTATGCGGGAAAGACGAGGTTGAAAGAACTAAGAAAATCAAAACCGCAGGATCACCCCCGCTTATGCGGGAAAGACACAATGTAGAAACATTAAAGAGCTTGCAAAATAGGATCACCCCCGCTTATGCGGGAAAGACTAAAAGAAATTATAATACCAATTCTCAATCTTAGGATCACCCCCGCTTATGCGGGAAAGACGGAAGCTGCACCAGCAACAGCACCTATAGATAGGGATCACCCCCGCTTATGCGGGAAAGACACGGGTCTTAAAGATGAGCAATTAACGAATTTAGGATCACCCCCGCTTATGCGGGAAAGACTTAGATTTTAAATTGAAAGTAATTGATGGTGATGGGATCACCCCCGCTTATGCGGGAAAGACAATTCAGACGTCCTTTTTATATGGATGATGTCAGGATCACCCCCGCTTATGCGGGAAAGACTTTGTACAACCATTAAAGCCCCGTTTATGGGGGGATCACCCCCGCTTATGCGGGAAAGACAAAGCTGTTATTTCACCTAATAAGTTTTTAACAGGATCACCCCCGCTTATGCGGGAAAGACTTATTATTTTTGCAAGTGTTAGCACTTGTTTTAGGATCACCCCCGCTTATGCGGGAAAGACTCACACTATTGATTTGATCATCTGTTAAACCTAAGGATCACCCCCGCTTATGCGGGAAAGACTCATCCAGTTGGGGCTGAATTTCCTCTTGAATAGGATCACCCCCGCTTATGCGGGAAAGACTTTCGTAACACCATATACCTATTATCTTTATCGGGATCACCCCCGCTTATGCGGGAAAGACAACGAATTGCTGGCACAACACATGACGGTTTCAGGATCACCCCCGCTTATGCGGGAAAGACCGAGATTATAGTGGATTACAGCAATACAGAGAAAGGATCACCCCCGCTTATGCGGGAAAGACCAGACGTTGCAGCTGGTGCAATGGCTGCAGGCGGGATCACCCCCGCTTATGCGGGAAAGACTCGCCCTTGTGAACGACTTCCGCCCAAATATCGGGATCACCCCCGCTTATGCGGGAAAGACTTTGTAGTCGTCAATCAATTGATTAGGTAGCTCAGGATCACCCCCGCTTATGCGGGAAAGACTTATACCACCAATGAGTATGTGAATATCAATGAGGATCACCCCCGCTTATGCGGGAAAGACTTGAGTTCAACAAGATTACTAGCCCCGTTGTCAGGATCACCCCCGCTTATGCGGGAAAGACTTAATCACTTGAATGAATCAGAAATGACCTATAGGATCACCCCCGCTTATGCGGGAAAGACTAGCCATCTATGATTAATCTCACTCATCGACTAGGATCACCCCCGCTTATGCGGGAAAGACTTTTAGACCTTGTTCCGTTAGCGCTTGTCTGTAGGATCACCCCCGCTTATGCGGGAAAGACTAATCATTGTGTGGTCAGCTATTAAAAACACCGGGATCACCCCCGCTTATGCGGGAAAGACGTCCTCATCTTCGGTTAAAACATCGTCACCTAAGGATCACCCCCGCTTATGCGGGAAAGACAAGTGCAGTTACAGATCCGGAACGTATTAAATAGGATCACCCCCGCTTATGCGGGAAAGACTGTGGCCAAGGAAAAGATGGATAACTTTAAAAAGGGATCACCCCCGCTTATGCGGGAAAGACTCTATTAGGTCCGAATTTATTCGGTCCTTTTAAGGATCACCCCCGCTTATGCGGGAAAGACTGAAACGTGGATTGTCTGTCTTCGAGTCCGAAGGGATCACCCCCGCTTATGCGGGAAAGACACAATCATTGATATTTATTATCTCCACAGCTGGGGATCACCCCCGCTTATGCGGGAAAGACCTATCTGTATTATATTTATAACGTATCGGCTCGGGATCACCCCCGCTTATGCGGGAAAGACCTTTCGGCGCTATCGGCTCAGGTATGCAAACCGGGATCACCCCCGCTTATGCGGGAAAGACGCATTAAATTTATTATATAAAGAATACAAAGAAGGATCACCCCCGCTTATGCGGGAAAGACCCCGTGCGGATGACTTAACTTCTGTTTCTTTTGGGATCACCCCCGCTTATGCGGGAAAGACACGATGGAAAGCATTGACTCCACGCTAAGAGAGGGATCACCCCCGCTTATGCGGGAAAGACTTTATCCAATGTTGATTTAGGCAATCGGTTTGAGGATCACCCCCGCTTATGCGGGAAAGACTTAATATGTTGTAATAGAGCGTCTTCGGCTTTAGGATCACCCCCGCTTATGCGGGAAAGACTGACTTGCGCCAATATGAGCATTTTTCTGTGCGGGATCACCCCCGCTTATGCGGGAAAGACTCGCATAGAAACCCGTTCAAGATCATCTCTGTCAGGATCACCCCCGCTTATGCGGGAAAGACCTCCGGTTTTTATACCGTTCCACACCGCCATCGGGATCACCCCCGCTTATGCGGGAAAGACAGAAAAGAATTCCCCAAAAGGGGGTGATGACAGGGATCACCCCCGCTTATGCGGGAAAGACCTGAAATCAAAGCTGCAGTCCATAATGCACTTGGGATCACCCCCGCTTATGCGGGAAAGACTTAAAGACGGATGAGCCTTTCGGTAGATAAGTAGGGATCACCCCCGCTTATGCGGGAAAGACTCAGATTCCGTGAATTTATGATACTGTTCTAACGGGATCACCCCCGCTTATGCGGGAAAGACGGCTCTCTAACGATTTGTTATTCGCTCCAGGCGGGATCACCCCCGCTTATGCGGGAAAGACTTGATTGTCATACCTACAATGCGCAAATCCTCAGGATCACCCCCGCTTATGCGGGAAAGACTTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGAGGATCACCCCCGCTTATGCGGGAAAGACTTAAAATCTTTAATTTGTAAATCCACATTACCGGGATCACCCCCGCTTATGCGGGAAAGACTGCAAAGTGTAGGATCTGCATTTACTAGTCATAGGATCACCCCCGCTTATGCGGGAAAGACACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAAGGATCACCCCCGCTTATGCGGGAAAGACGTTGGTGATGATACAGACGCCCCATATTGCGCTGGGATCACCCCCGCTTATGCGGGAAAGACCTGTTACAAAGCTGTTTACAATACCATCAATCAGGATCACCCCCGCTTATGCGGGAAAGAC

>NZ_CP046246|2|2|513280-517286|CRISPRCasFinder
GAATCACCCCCGCTTATGCGGGAAAGAC	GATCGCCAGCCATTGACTTGAGACCCTTCATAA
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGATATAAGATAGCCAATCGTAACCATTGATG
GGATCACCCCCGCTTATGCGGGAAAGAC	ATGGTCTGATATAAAAGCTAATACATCTAGCAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GCTTGTTCATTCGAGGTCGTAGAACGATTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGTTGTGTGCTAGCAGATTGGCCACCGCCACTA
GGATCACCCCCGCTTATGCGGGAAAGAC	GGATGCGCAGGCAACACAGGCACATCATCAATG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAGCAAGTTTAGTCAGGAAGGGAGTGTTGTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	GTAACGCAATCAAGTCCGCATCATCATAGCTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	CCTTGTTTAAAGTCTATGCTCTCGCCTTTGCTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAGTCAGAGCATAGGTATTATGCGCGGAACAG
GGATCACCCCCGCTTATGCGGGAAAGAC	AAAAGCCAACCCTCTTTCGTTAAATTTCGCGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAATCTTTAATTTGTAAATCAACATTACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGAAGAAGATAGAAGCACGAGAGTGACATCCAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GAGGTTGAAAGAACTAAGAAAATCAAAACCGCA
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAATGTAGAAACATTAAAGAGCTTGCAAAATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TAAAAGAAATTATAATACCAATTCTCAATCTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	GGAAGCTGCACCAGCAACAGCACCTATAGATAG
GGATCACCCCCGCTTATGCGGGAAAGAC	ACGGGTCTTAAAGATGAGCAATTAACGAATTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAGATTTTAAATTGAAAGTAATTGATGGTGATG
GGATCACCCCCGCTTATGCGGGAAAGAC	AATTCAGACGTCCTTTTTATATGGATGATGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTGTACAACCATTAAAGCCCCGTTTATGGGG
GGATCACCCCCGCTTATGCGGGAAAGAC	AAAGCTGTTATTTCACCTAATAAGTTTTTAACA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTATTATTTTTGCAAGTGTTAGCACTTGTTTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TCACACTATTGATTTGATCATCTGTTAAACCTAA
GGATCACCCCCGCTTATGCGGGAAAGAC	TCATCCAGTTGGGGCTGAATTTCCTCTTGAATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTCGTAACACCATATACCTATTATCTTTATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	AACGAATTGCTGGCACAACACATGACGGTTTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	CGAGATTATAGTGGATTACAGCAATACAGAGAAA
GGATCACCCCCGCTTATGCGGGAAAGAC	CAGACGTTGCAGCTGGTGCAATGGCTGCAGGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGCCCTTGTGAACGACTTCCGCCCAAATATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTGTAGTCGTCAATCAATTGATTAGGTAGCTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTATACCACCAATGAGTATGTGAATATCAATGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTGAGTTCAACAAGATTACTAGCCCCGTTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAATCACTTGAATGAATCAGAAATGACCTATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TAGCCATCTATGATTAATCTCACTCATCGACTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTTAGACCTTGTTCCGTTAGCGCTTGTCTGTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TAATCATTGTGTGGTCAGCTATTAAAAACACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	GTCCTCATCTTCGGTTAAAACATCGTCACCTAA
GGATCACCCCCGCTTATGCGGGAAAGAC	AAGTGCAGTTACAGATCCGGAACGTATTAAATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGTGGCCAAGGAAAAGATGGATAACTTTAAAAAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCTATTAGGTCCGAATTTATTCGGTCCTTTTAA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGAAACGTGGATTGTCTGTCTTCGAGTCCGAAG
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAATCATTGATATTTATTATCTCCACAGCTGG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTATCTGTATTATATTTATAACGTATCGGCTCG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTTTCGGCGCTATCGGCTCAGGTATGCAAACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	GCATTAAATTTATTATATAAAGAATACAAAGAA
GGATCACCCCCGCTTATGCGGGAAAGAC	CCCGTGCGGATGACTTAACTTCTGTTTCTTTTG
GGATCACCCCCGCTTATGCGGGAAAGAC	ACGATGGAAAGCATTGACTCCACGCTAAGAGAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTATCCAATGTTGATTTAGGCAATCGGTTTGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAATATGTTGTAATAGAGCGTCTTCGGCTTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGACTTGCGCCAATATGAGCATTTTTCTGTGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGCATAGAAACCCGTTCAAGATCATCTCTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	CTCCGGTTTTTATACCGTTCCACACCGCCATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	AGAAAAGAATTCCCCAAAAGGGGGTGATGACAG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGAAATCAAAGCTGCAGTCCATAATGCACTTG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAGACGGATGAGCCTTTCGGTAGATAAGTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCAGATTCCGTGAATTTATGATACTGTTCTAACG
GGATCACCCCCGCTTATGCGGGAAAGAC	GGCTCTCTAACGATTTGTTATTCGCTCCAGGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTGATTGTCATACCTACAATGCGCAAATCCTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAATCTTTAATTTGTAAATCCACATTACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TGCAAAGTGTAGGATCTGCATTTACTAGTCATA
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GTTGGTGATGATACAGACGCCCCATATTGCGCTG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGTTACAAAGCTGTTTACAATACCATCAATCA
GGATCACCCCCGCTTATGCGGGAAAGAC

>NZ_CP046246|2|1|513280-517286|CRT
GAATCACCCCCGCTTATGCGGGAAAGAC	GATCGCCAGCCATTGACTTGAGACCCTTCATAA
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGATATAAGATAGCCAATCGTAACCATTGATG
GGATCACCCCCGCTTATGCGGGAAAGAC	ATGGTCTGATATAAAAGCTAATACATCTAGCAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GCTTGTTCATTCGAGGTCGTAGAACGATTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGTTGTGTGCTAGCAGATTGGCCACCGCCACTA
GGATCACCCCCGCTTATGCGGGAAAGAC	GGATGCGCAGGCAACACAGGCACATCATCAATG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAGCAAGTTTAGTCAGGAAGGGAGTGTTGTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	GTAACGCAATCAAGTCCGCATCATCATAGCTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	CCTTGTTTAAAGTCTATGCTCTCGCCTTTGCTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAGTCAGAGCATAGGTATTATGCGCGGAACAG
GGATCACCCCCGCTTATGCGGGAAAGAC	AAAAGCCAACCCTCTTTCGTTAAATTTCGCGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAATCTTTAATTTGTAAATCAACATTACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGAAGAAGATAGAAGCACGAGAGTGACATCCAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GAGGTTGAAAGAACTAAGAAAATCAAAACCGCA
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAATGTAGAAACATTAAAGAGCTTGCAAAATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TAAAAGAAATTATAATACCAATTCTCAATCTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	GGAAGCTGCACCAGCAACAGCACCTATAGATAG
GGATCACCCCCGCTTATGCGGGAAAGAC	ACGGGTCTTAAAGATGAGCAATTAACGAATTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAGATTTTAAATTGAAAGTAATTGATGGTGATG
GGATCACCCCCGCTTATGCGGGAAAGAC	AATTCAGACGTCCTTTTTATATGGATGATGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTGTACAACCATTAAAGCCCCGTTTATGGGG
GGATCACCCCCGCTTATGCGGGAAAGAC	AAAGCTGTTATTTCACCTAATAAGTTTTTAACA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTATTATTTTTGCAAGTGTTAGCACTTGTTTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TCACACTATTGATTTGATCATCTGTTAAACCTAA
GGATCACCCCCGCTTATGCGGGAAAGAC	TCATCCAGTTGGGGCTGAATTTCCTCTTGAATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTCGTAACACCATATACCTATTATCTTTATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	AACGAATTGCTGGCACAACACATGACGGTTTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	CGAGATTATAGTGGATTACAGCAATACAGAGAAA
GGATCACCCCCGCTTATGCGGGAAAGAC	CAGACGTTGCAGCTGGTGCAATGGCTGCAGGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGCCCTTGTGAACGACTTCCGCCCAAATATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTGTAGTCGTCAATCAATTGATTAGGTAGCTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTATACCACCAATGAGTATGTGAATATCAATGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTGAGTTCAACAAGATTACTAGCCCCGTTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAATCACTTGAATGAATCAGAAATGACCTATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TAGCCATCTATGATTAATCTCACTCATCGACTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTTAGACCTTGTTCCGTTAGCGCTTGTCTGTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TAATCATTGTGTGGTCAGCTATTAAAAACACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	GTCCTCATCTTCGGTTAAAACATCGTCACCTAA
GGATCACCCCCGCTTATGCGGGAAAGAC	AAGTGCAGTTACAGATCCGGAACGTATTAAATA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGTGGCCAAGGAAAAGATGGATAACTTTAAAAAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCTATTAGGTCCGAATTTATTCGGTCCTTTTAA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGAAACGTGGATTGTCTGTCTTCGAGTCCGAAG
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAATCATTGATATTTATTATCTCCACAGCTGG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTATCTGTATTATATTTATAACGTATCGGCTCG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTTTCGGCGCTATCGGCTCAGGTATGCAAACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	GCATTAAATTTATTATATAAAGAATACAAAGAA
GGATCACCCCCGCTTATGCGGGAAAGAC	CCCGTGCGGATGACTTAACTTCTGTTTCTTTTG
GGATCACCCCCGCTTATGCGGGAAAGAC	ACGATGGAAAGCATTGACTCCACGCTAAGAGAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTTATCCAATGTTGATTTAGGCAATCGGTTTGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAATATGTTGTAATAGAGCGTCTTCGGCTTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGACTTGCGCCAATATGAGCATTTTTCTGTGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGCATAGAAACCCGTTCAAGATCATCTCTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	CTCCGGTTTTTATACCGTTCCACACCGCCATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	AGAAAAGAATTCCCCAAAAGGGGGTGATGACAG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGAAATCAAAGCTGCAGTCCATAATGCACTTG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAGACGGATGAGCCTTTCGGTAGATAAGTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCAGATTCCGTGAATTTATGATACTGTTCTAACG
GGATCACCCCCGCTTATGCGGGAAAGAC	GGCTCTCTAACGATTTGTTATTCGCTCCAGGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTGATTGTCATACCTACAATGCGCAAATCCTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAATCTTTAATTTGTAAATCCACATTACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TGCAAAGTGTAGGATCTGCATTTACTAGTCATA
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GTTGGTGATGATACAGACGCCCCATATTGCGCTG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGTTACAAAGCTGTTTACAATACCATCAATCA
GGATCACCCCCGCTTATGCGGGAAAGAC

>NZ_CP046246|2|1|513282-517286|PILER-CR
ATCACCCCCGCTTATGCGGGAAAGACGA	TCGCCAGCCATTGACTTGAGACCCTTCATAAGG
ATCACCCCCGCTTATGCGGGAAAGACCT	GATATAAGATAGCCAATCGTAACCATTGATGGG
ATCACCCCCGCTTATGCGGGAAAGACAT	GGTCTGATATAAAAGCTAATACATCTAGCAAGG
ATCACCCCCGCTTATGCGGGAAAGACGC	TTGTTCATTCGAGGTCGTAGAACGATTGTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTG	TTGTGTGCTAGCAGATTGGCCACCGCCACTAGG
ATCACCCCCGCTTATGCGGGAAAGACGG	ATGCGCAGGCAACACAGGCACATCATCAATGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AGCAAGTTTAGTCAGGAAGGGAGTGTTGTAGGG
ATCACCCCCGCTTATGCGGGAAAGACGT	AACGCAATCAAGTCCGCATCATCATAGCTAGGG
ATCACCCCCGCTTATGCGGGAAAGACCC	TTGTTTAAAGTCTATGCTCTCGCCTTTGCTAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AGTCAGAGCATAGGTATTATGCGCGGAACAGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	AAGCCAACCCTCTTTCGTTAAATTTCGCGCGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AAAATCTTTAATTTGTAAATCAACATTACCGGG
ATCACCCCCGCTTATGCGGGAAAGACTC	GAAGAAGATAGAAGCACGAGAGTGACATCCAAGG
ATCACCCCCGCTTATGCGGGAAAGACGA	GGTTGAAAGAACTAAGAAAATCAAAACCGCAGG
ATCACCCCCGCTTATGCGGGAAAGACAC	AATGTAGAAACATTAAAGAGCTTGCAAAATAGG
ATCACCCCCGCTTATGCGGGAAAGACTA	AAAGAAATTATAATACCAATTCTCAATCTTAGG
ATCACCCCCGCTTATGCGGGAAAGACGG	AAGCTGCACCAGCAACAGCACCTATAGATAGGG
ATCACCCCCGCTTATGCGGGAAAGACAC	GGGTCTTAAAGATGAGCAATTAACGAATTTAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AGATTTTAAATTGAAAGTAATTGATGGTGATGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	TTCAGACGTCCTTTTTATATGGATGATGTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TGTACAACCATTAAAGCCCCGTTTATGGGGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	AGCTGTTATTTCACCTAATAAGTTTTTAACAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	ATTATTTTTGCAAGTGTTAGCACTTGTTTTAGG
ATCACCCCCGCTTATGCGGGAAAGACTC	ACACTATTGATTTGATCATCTGTTAAACCTAAGG
ATCACCCCCGCTTATGCGGGAAAGACTC	ATCCAGTTGGGGCTGAATTTCCTCTTGAATAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TCGTAACACCATATACCTATTATCTTTATCGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	CGAATTGCTGGCACAACACATGACGGTTTCAGG
ATCACCCCCGCTTATGCGGGAAAGACCG	AGATTATAGTGGATTACAGCAATACAGAGAAAGG
ATCACCCCCGCTTATGCGGGAAAGACCA	GACGTTGCAGCTGGTGCAATGGCTGCAGGCGGG
ATCACCCCCGCTTATGCGGGAAAGACTC	GCCCTTGTGAACGACTTCCGCCCAAATATCGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TGTAGTCGTCAATCAATTGATTAGGTAGCTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	ATACCACCAATGAGTATGTGAATATCAATGAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	GAGTTCAACAAGATTACTAGCCCCGTTGTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AATCACTTGAATGAATCAGAAATGACCTATAGG
ATCACCCCCGCTTATGCGGGAAAGACTA	GCCATCTATGATTAATCTCACTCATCGACTAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TTAGACCTTGTTCCGTTAGCGCTTGTCTGTAGG
ATCACCCCCGCTTATGCGGGAAAGACTA	ATCATTGTGTGGTCAGCTATTAAAAACACCGGG
ATCACCCCCGCTTATGCGGGAAAGACGT	CCTCATCTTCGGTTAAAACATCGTCACCTAAGG
ATCACCCCCGCTTATGCGGGAAAGACAA	GTGCAGTTACAGATCCGGAACGTATTAAATAGG
ATCACCCCCGCTTATGCGGGAAAGACTG	TGGCCAAGGAAAAGATGGATAACTTTAAAAAGGG
ATCACCCCCGCTTATGCGGGAAAGACTC	TATTAGGTCCGAATTTATTCGGTCCTTTTAAGG
ATCACCCCCGCTTATGCGGGAAAGACTG	AAACGTGGATTGTCTGTCTTCGAGTCCGAAGGG
ATCACCCCCGCTTATGCGGGAAAGACAC	AATCATTGATATTTATTATCTCCACAGCTGGGG
ATCACCCCCGCTTATGCGGGAAAGACCT	ATCTGTATTATATTTATAACGTATCGGCTCGGG
ATCACCCCCGCTTATGCGGGAAAGACCT	TTCGGCGCTATCGGCTCAGGTATGCAAACCGGG
ATCACCCCCGCTTATGCGGGAAAGACGC	ATTAAATTTATTATATAAAGAATACAAAGAAGG
ATCACCCCCGCTTATGCGGGAAAGACCC	CGTGCGGATGACTTAACTTCTGTTTCTTTTGGG
ATCACCCCCGCTTATGCGGGAAAGACAC	GATGGAAAGCATTGACTCCACGCTAAGAGAGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TATCCAATGTTGATTTAGGCAATCGGTTTGAGGATCACCCCCGCTTATGCGGGAAAGACTTAATATGTTGTAATAGAGCGTCTTCGGCTTTAGGATCACCCCCGCTTATGCGGGAAAGACTGACTTGCGCCAATATGAGCATTTTTCTGTGCGGGATCACCCCCGCTTATGCGGGAAAGACTCGCATAGAAACCCGTTCAAGATCATCTCTGTCAGGATCACCCCCGCTTATGCGGGAAAGACCTCCGGTTTTTATACCGTTCCACACCGCCATCGGGATCACCCCCGCTTATGCGGGAAAGACAGAAAAGAATTCCCCAAAAGGGGGTGATGACAGGGATCACCCCCGCTTATGCGGGAAAGACCTGAAATCAAAGCTGCAGTCCATAATGCACTTGGGATCACCCCCGCTTATGCGGGAAAGACTTAAAGACGGATGAGCCTTTCGGTAGATAAGTAGGGATCACCCCCGCTTATGCGGGAAAGACTCAGATTCCGTGAATTTATGATACTGTTCTAACGGGATCACCCCCGCTTATGCGGGAAAGACGGCTCTCTAACGATTTGTTATTCGCTCCAGGCGGGATCACCCCCGCTTATGCGGGAAAGACTTGATTGTCATACCTACAATGCGCAAATCCTCAGGATCACCCCCGCTTATGCGGGAAAGACTTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGAGGATCACCCCCGCTTATGCGGGAAAGACTTAAAATCTTTAATTTGTAAATCCACATTACCGGGATCACCCCCGCTTATGCGGGAAAGACTGCAAAGTGTAGGATCTGCATTTACTAGTCATAGGATCACCCCCGCTTATGCGGGAAAGACACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAAGGATCACCCCCGCTTATGCGGGAAAGACGTTGGTGATGATACAGACGCCCCATATTGCGCTGGGATCACCCCCGCTTATGCGGGAAAGACCTGTTACAAAGCTGTTTACAATACCATCAATCAGG
	TTAATATGTTGTAATAGAGCGTCTTCGGCTTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGACTTGCGCCAATATGAGCATTTTTCTGTGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGCATAGAAACCCGTTCAAGATCATCTCTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	CTCCGGTTTTTATACCGTTCCACACCGCCATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	AGAAAAGAATTCCCCAAAAGGGGGTGATGACAG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGAAATCAAAGCTGCAGTCCATAATGCACTTG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAGACGGATGAGCCTTTCGGTAGATAAGTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCAGATTCCGTGAATTTATGATACTGTTCTAACG
GGATCACCCCCGCTTATGCGGGAAAGAC	GGCTCTCTAACGATTTGTTATTCGCTCCAGGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTGATTGTCATACCTACAATGCGCAAATCCTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAATCTTTAATTTGTAAATCCACATTACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TGCAAAGTGTAGGATCTGCATTTACTAGTCATA
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GTTGGTGATGATACAGACGCCCCATATTGCGCTG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGTTACAAAGCTGTTTACAATACCATCAATCA
GGATCACCCCCGCTTATGCGGGAAAGAC

>NZ_CP046246|2|2|516274-517286|PILER-CR
	TCGCCAGCCATTGACTTGAGACCCTTCATAAGG
ATCACCCCCGCTTATGCGGGAAAGACCT	GATATAAGATAGCCAATCGTAACCATTGATGGG
ATCACCCCCGCTTATGCGGGAAAGACAT	GGTCTGATATAAAAGCTAATACATCTAGCAAGG
ATCACCCCCGCTTATGCGGGAAAGACGC	TTGTTCATTCGAGGTCGTAGAACGATTGTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTG	TTGTGTGCTAGCAGATTGGCCACCGCCACTAGG
ATCACCCCCGCTTATGCGGGAAAGACGG	ATGCGCAGGCAACACAGGCACATCATCAATGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AGCAAGTTTAGTCAGGAAGGGAGTGTTGTAGGG
ATCACCCCCGCTTATGCGGGAAAGACGT	AACGCAATCAAGTCCGCATCATCATAGCTAGGG
ATCACCCCCGCTTATGCGGGAAAGACCC	TTGTTTAAAGTCTATGCTCTCGCCTTTGCTAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AGTCAGAGCATAGGTATTATGCGCGGAACAGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	AAGCCAACCCTCTTTCGTTAAATTTCGCGCGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AAAATCTTTAATTTGTAAATCAACATTACCGGG
ATCACCCCCGCTTATGCGGGAAAGACTC	GAAGAAGATAGAAGCACGAGAGTGACATCCAAGG
ATCACCCCCGCTTATGCGGGAAAGACGA	GGTTGAAAGAACTAAGAAAATCAAAACCGCAGG
ATCACCCCCGCTTATGCGGGAAAGACAC	AATGTAGAAACATTAAAGAGCTTGCAAAATAGG
ATCACCCCCGCTTATGCGGGAAAGACTA	AAAGAAATTATAATACCAATTCTCAATCTTAGG
ATCACCCCCGCTTATGCGGGAAAGACGG	AAGCTGCACCAGCAACAGCACCTATAGATAGGG
ATCACCCCCGCTTATGCGGGAAAGACAC	GGGTCTTAAAGATGAGCAATTAACGAATTTAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AGATTTTAAATTGAAAGTAATTGATGGTGATGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	TTCAGACGTCCTTTTTATATGGATGATGTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TGTACAACCATTAAAGCCCCGTTTATGGGGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	AGCTGTTATTTCACCTAATAAGTTTTTAACAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	ATTATTTTTGCAAGTGTTAGCACTTGTTTTAGG
ATCACCCCCGCTTATGCGGGAAAGACTC	ACACTATTGATTTGATCATCTGTTAAACCTAAGG
ATCACCCCCGCTTATGCGGGAAAGACTC	ATCCAGTTGGGGCTGAATTTCCTCTTGAATAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TCGTAACACCATATACCTATTATCTTTATCGGG
ATCACCCCCGCTTATGCGGGAAAGACAA	CGAATTGCTGGCACAACACATGACGGTTTCAGG
ATCACCCCCGCTTATGCGGGAAAGACCG	AGATTATAGTGGATTACAGCAATACAGAGAAAGG
ATCACCCCCGCTTATGCGGGAAAGACCA	GACGTTGCAGCTGGTGCAATGGCTGCAGGCGGG
ATCACCCCCGCTTATGCGGGAAAGACTC	GCCCTTGTGAACGACTTCCGCCCAAATATCGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TGTAGTCGTCAATCAATTGATTAGGTAGCTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	ATACCACCAATGAGTATGTGAATATCAATGAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	GAGTTCAACAAGATTACTAGCCCCGTTGTCAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	AATCACTTGAATGAATCAGAAATGACCTATAGG
ATCACCCCCGCTTATGCGGGAAAGACTA	GCCATCTATGATTAATCTCACTCATCGACTAGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TTAGACCTTGTTCCGTTAGCGCTTGTCTGTAGG
ATCACCCCCGCTTATGCGGGAAAGACTA	ATCATTGTGTGGTCAGCTATTAAAAACACCGGG
ATCACCCCCGCTTATGCGGGAAAGACGT	CCTCATCTTCGGTTAAAACATCGTCACCTAAGG
ATCACCCCCGCTTATGCGGGAAAGACAA	GTGCAGTTACAGATCCGGAACGTATTAAATAGG
ATCACCCCCGCTTATGCGGGAAAGACTG	TGGCCAAGGAAAAGATGGATAACTTTAAAAAGGG
ATCACCCCCGCTTATGCGGGAAAGACTC	TATTAGGTCCGAATTTATTCGGTCCTTTTAAGG
ATCACCCCCGCTTATGCGGGAAAGACTG	AAACGTGGATTGTCTGTCTTCGAGTCCGAAGGG
ATCACCCCCGCTTATGCGGGAAAGACAC	AATCATTGATATTTATTATCTCCACAGCTGGGG
ATCACCCCCGCTTATGCGGGAAAGACCT	ATCTGTATTATATTTATAACGTATCGGCTCGGG
ATCACCCCCGCTTATGCGGGAAAGACCT	TTCGGCGCTATCGGCTCAGGTATGCAAACCGGG
ATCACCCCCGCTTATGCGGGAAAGACGC	ATTAAATTTATTATATAAAGAATACAAAGAAGG
ATCACCCCCGCTTATGCGGGAAAGACCC	CGTGCGGATGACTTAACTTCTGTTTCTTTTGGG
ATCACCCCCGCTTATGCGGGAAAGACAC	GATGGAAAGCATTGACTCCACGCTAAGAGAGGG
ATCACCCCCGCTTATGCGGGAAAGACTT	TATCCAATGTTGATTTAGGCAATCGGTTTGAGGATCACCCCCGCTTATGCGGGAAAGACTTAATATGTTGTAATAGAGCGTCTTCGGCTTTAGGATCACCCCCGCTTATGCGGGAAAGACTGACTTGCGCCAATATGAGCATTTTTCTGTGCGGGATCACCCCCGCTTATGCGGGAAAGACTCGCATAGAAACCCGTTCAAGATCATCTCTGTCAGGATCACCCCCGCTTATGCGGGAAAGACCTCCGGTTTTTATACCGTTCCACACCGCCATCGGGATCACCCCCGCTTATGCGGGAAAGACAGAAAAGAATTCCCCAAAAGGGGGTGATGACAGGGATCACCCCCGCTTATGCGGGAAAGACCTGAAATCAAAGCTGCAGTCCATAATGCACTTGGGATCACCCCCGCTTATGCGGGAAAGACTTAAAGACGGATGAGCCTTTCGGTAGATAAGTAGGGATCACCCCCGCTTATGCGGGAAAGACTCAGATTCCGTGAATTTATGATACTGTTCTAACGGGATCACCCCCGCTTATGCGGGAAAGACGGCTCTCTAACGATTTGTTATTCGCTCCAGGCGGGATCACCCCCGCTTATGCGGGAAAGACTTGATTGTCATACCTACAATGCGCAAATCCTCAGGATCACCCCCGCTTATGCGGGAAAGACTTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGAGGATCACCCCCGCTTATGCGGGAAAGACTTAAAATCTTTAATTTGTAAATCCACATTACCGGGATCACCCCCGCTTATGCGGGAAAGACTGCAAAGTGTAGGATCTGCATTTACTAGTCATAGGATCACCCCCGCTTATGCGGGAAAGACACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAAGGATCACCCCCGCTTATGCGGGAAAGACGTTGGTGATGATACAGACGCCCCATATTGCGCTGGGATCACCCCCGCTTATGCGGGAAAGACCTGTTACAAAGCTGTTTACAATACCATCAATCAGG
	TTAATATGTTGTAATAGAGCGTCTTCGGCTTTA
GGATCACCCCCGCTTATGCGGGAAAGAC	TGACTTGCGCCAATATGAGCATTTTTCTGTGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCGCATAGAAACCCGTTCAAGATCATCTCTGTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	CTCCGGTTTTTATACCGTTCCACACCGCCATCG
GGATCACCCCCGCTTATGCGGGAAAGAC	AGAAAAGAATTCCCCAAAAGGGGGTGATGACAG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGAAATCAAAGCTGCAGTCCATAATGCACTTG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAGACGGATGAGCCTTTCGGTAGATAAGTAG
GGATCACCCCCGCTTATGCGGGAAAGAC	TCAGATTCCGTGAATTTATGATACTGTTCTAACG
GGATCACCCCCGCTTATGCGGGAAAGAC	GGCTCTCTAACGATTTGTTATTCGCTCCAGGCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TTGATTGTCATACCTACAATGCGCAAATCCTCA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTCTTCCCTTAAAGACACCGCCGTTTTCACTTCGTTGA
GGATCACCCCCGCTTATGCGGGAAAGAC	TTAAAATCTTTAATTTGTAAATCCACATTACCG
GGATCACCCCCGCTTATGCGGGAAAGAC	TGCAAAGTGTAGGATCTGCATTTACTAGTCATA
GGATCACCCCCGCTTATGCGGGAAAGAC	ACAAGCGTAAGTTTAGAAACGCTAGGGGAAAAA
GGATCACCCCCGCTTATGCGGGAAAGAC	GTTGGTGATGATACAGACGCCCCATATTGCGCTG
GGATCACCCCCGCTTATGCGGGAAAGAC	CTGTTACAAAGCTGTTTACAATACCATCAATCA
GGATCACCCCCGCTTATGCGGGAAAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046246.1\|WP_131471581.1\|517315_518215_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP046246.1\|WP_155224252.1\|519799_520501_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP046246.1\|WP_155224253.1\|522194_523895_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP046246.1\|WP_103099925.1\|527764_528940_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226925
NZ_CP046246.1\|WP_014123848.1\|504968_506075_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP046246.1\|WP_155224254.1\|529034_530288_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP046246.1\|WP_155224250.1\|506725_508144_-\|ISLre2-family-transposase	unknown	unknown	gnl\|CDD\|284250
NZ_CP046246.1\|WP_130706165.1\|521590_522181_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP046246.1\|WP_094243479.1\|502710_503571_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046246.1\|WP_130706153.1\|518214_519159_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP046246.1\|WP_130706152.1\|519162_519798_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|378050
NZ_CP046246.1\|WP_155224251.1\|511326_512688_+\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_CP046246.1\|WP_155224249.1\|503656_504400_-\|DUF1275-family-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP046246.1\|WP_155224248.1\|501456_502221_-\|peptidase-S66-family-protein	unknown	unknown	gnl\|CDD\|132882
NZ_CP046246.1\|WP_061840831.1\|500775_501216_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP046246.1\|WP_130706164.1\|523881_526647_-\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP046246.1\|WP_014123528.1\|508684_510007_+\|IS1380-family-transposase	unknown	unknown	gnl\|CDD\|379340
NZ_CP046246.1\|WP_130706150.1\|520502_521588_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP046246.1\|WP_061840830.1\|500430_500688_-\|DUF3290-family-protein	unknown	unknown	unknown
NZ_CP046246.1\|WP_130706155.1\|512957_513239_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102

Protein	Function_ID	Function_description	E-value
NZ_CP046246.1\|WP_131471581.1\|517315_518215_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	3.0471e-41
NZ_CP046246.1\|WP_155224252.1\|519799_520501_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.23525e-44
NZ_CP046246.1\|WP_155224253.1\|522194_523895_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	6.53227e-91
NZ_CP046246.1\|WP_103099925.1\|527764_528940_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	3.20545e-49
NZ_CP046246.1\|WP_014123848.1\|504968_506075_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	6.6948e-19
NZ_CP046246.1\|WP_155224254.1\|529034_530288_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	5.40451e-140
NZ_CP046246.1\|WP_155224250.1\|506725_508144_-\|ISLre2-family-transposase	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	2.52956e-20
NZ_CP046246.1\|WP_130706165.1\|521590_522181_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	2.21884e-32
NZ_CP046246.1\|WP_130706153.1\|518214_519159_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	5.81579e-127
NZ_CP046246.1\|WP_130706152.1\|519162_519798_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.65211e-64
NZ_CP046246.1\|WP_155224251.1\|511326_512688_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.95531e-16
NZ_CP046246.1\|WP_155224249.1\|503656_504400_-\|DUF1275-family-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	1.13226e-29
NZ_CP046246.1\|WP_155224248.1\|501456_502221_-\|peptidase-S66-family-protein	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	1.18744e-45
NZ_CP046246.1\|WP_061840831.1\|500775_501216_-\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	6.34046e-24
NZ_CP046246.1\|WP_130706164.1\|523881_526647_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	4.46447e-85
NZ_CP046246.1\|WP_014123528.1\|508684_510007_+\|IS1380-family-transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	0
NZ_CP046246.1\|WP_130706150.1\|520502_521588_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.71711e-151
NZ_CP046246.1\|WP_130706155.1\|512957_513239_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	2.55886e-10

>NZ_CP046246.1|WP_130706155.1|512957_513239_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MSVKDNKTVQVKIDKKVTDKVGQILDELGLTTTAAITMYFKRIVADGKIPFDVSLSEQERERIKNNIVRNEELLSLKEYITDESIEKWLDNED
>NZ_CP046246.1|WP_155224251.1|511326_512688_+|transposase
MSIITQTTPNSEKISTSVSDFFHQFHVASALKKSNAVHRKGFSVSVIFSFLLASIFTNGSTYRFYQKQKEQLSFSDKTFRNVLNDPHTHWQKLLILVAKSVITFLRPLTDDARKTTFIVDDSVYSRLNAKKVECAALQYDHAKKKYFKGFRYLQLGWSDGNSFVPVAFSLLSGKRKLQSDLDIGDQRTNRGKRKAQALRKGTEVTLELLRSALNQGIHADYVLFDTWFSSPKMFQQIRDLKCHCVAMVKRSQKIYYRYQGQKMDVKEIFKRNKKRRGRSRYLLSVQVEAVVEGEVLPIKLVYIRNRNKRNDYLVLASTDIDLTEDEIIQLYARRWSVEVYFKMCKQYLKLAKYQGISYDGIFAHTTLVAIGYMILAVQERESKDDRTLGELFYLLIDELSELSVSEAILQLLVLFQEAFADEYVLDEAVLNNIIEQFLEKLPSSIQKQLKQAG
>NZ_CP046246.1|WP_014123528.1|508684_510007_+|IS1380-family-transposase
MSFTLQQKPLMFNSQKKISIANDGGALTNDAGMVLVAEFLKKIHFDQLLNERIYINDGRKFSHHSWLEILKQWLYQLIAGYSRDRDANKVQYDRLFQEALQQENLSSQSMLSTFLHTLTTENVSQLSQVAKDLADLWLDHDNTQHLVLDFDSTACPTYGEQEEAEFIYHYGINGYHPFVTFEGLTGLALDVRHRHGKSYTSTHAEDYLEEMLDRYQQRSSDPLIMVRGDSGFAKPEIFSHCEDRQVRYVIKLKSNARLLDHIQHQVLYQDDTDYTKTEQQYFLMDYRANKWRQSRRVAMKATRLAGSLLFSDFQFIVTNFENLDPKTIFQLYQKRGNMENFIKEMKGGFFAEKTDSASFTANQARLALSFMAYNIIHLMKHLTFPSTEKATVIDTIRFKLFHIAGRMTAHARQIQIHLSNTNVYDTLFWDVLARIQRLNL
>NZ_CP046246.1|WP_155224250.1|506725_508144_-|ISLre2-family-transposase
MDSIVTDLVEVMKKETNFLARERAMMIFFTQLIATITQLAFQTLDEEICAQCKKEGFRVDRKSERTITFLFGPVTYVRRRMKNQANDIRYPLDEFLGIRKGLRYSSLVLRNVAQLGSNMVYRHVSQAIDCLTSWQMSHQNVQQLVVKTGEFIQARSTHESRYDGVITKKKVPYLYLEGDGVKINGQKKQSLEVHRFQVCEGSQKVGNRSEMIAPHFVSHLNRQKAYKEMMAYLQAYYDLSHTVVISNSDGGSGYEKAVFDELALGCLRHEHFRDRYHVHRKIKERMAFVPQLQHRMIRAIEHYNWQEVQLVLDTSESLIEEKEAEDFEHLRLLHHYLQRSWPYLKSLKARGIKDPKACIGTIESTHRKITYRMKRQGRLWTKTGAQAMIRVIDSLRNQEFEGWLNQYEALPNDVVAQEKRWQAMKRWVQKKPRFQAHEGAFKGQIGEGKAKSAPLGQFAKGLNQLIMTPNVL
>NZ_CP046246.1|WP_014123848.1|504968_506075_+|IS4-family-transposase
MDKYKTISAFNKWFSNINFKKLPFSIREKISQADKYHKKFAFEHFLKVFLYGIDHECESLREMDTAFVSPDLQQTMALDAISHSQLSRELAQMDDEILWAIFAQLLEKARSKTPVTKRNALYLVDSSTFPLNTTRYPWADFRSTKAGIKLHLKLCFMDKEHLYPDQFEVTNAVEHDDNHLEVFVNQPEATYIFDRGYIDYERLDEMEADGYFFVTRVKKNTKIHVRETYDTSQSKNILRDQMVVLGTQVYLTSPFRLVTIQDEKGKQLRFVTNRFDVTAQEVADMYKARWQIELFFKHIKQHMTIKKLFSHSEKGVSNQIILAMIASLLTYLLKVETGSKKSPFQIKRLLKHLLFQPFEELWVLLVPT
>NZ_CP046246.1|WP_155224249.1|503656_504400_-|DUF1275-family-protein
MKSIFSNTKHLDVYIHYIIALCGGFFGMYAITSRMGNFGQAQTANLIEIVRNILGKNMSEGALRIVAALLFMGGIISATIMERKTKIDLRYFSISFDLIAAILIGFFPLSMNPVVALYPVFFATAFQWCIFKGAKGYPSATVFCTNNLKQATISIIDYFLMPQDNPERRGKIEKAKLYGGTCVNFYLGVLISYLLWYFFGVHSIWFITFPLLINFVLVVLDSKRHAFYLNVEKNTVHENLSYNTTKL
>NZ_CP046246.1|WP_094243479.1|502710_503571_+|hypothetical-protein
MKKRTLLATSLVISGVSLIGCSVDSGNKNSVSDADVSTEISTSTPINDSSETNSLTETSETTTVEDSSVSNKEKATNSTEETTSSQKEDETAENEDQRESPQGTVPVRKYSEEEKEEASQEFLDWAVSRAEEGNMAVTDFFLGHGASGPGDWFAVTEDGEIQLQQHRTSEDLPGYDAYDIHALGGVVFYVSASDVTGYDEAPKEAATVEGFSEIVDADYPMHRYLLGDNGIVYELIASVDEIGSFSGSYGMYAEDGKKKEREPEFTFKVSDDVDAQKEWTHILEGY
>NZ_CP046246.1|WP_155224248.1|501456_502221_-|peptidase-S66-family-protein
MSIKPEDKRKVVLVGNSDPRTSLQEVYDIKEILEKLGLDVILSPSLQENTLFNAGEKAEIMNQYYADNSIEAIFDISGGDIANGVLDKLDYSLIRKQKKKFYGYSDLTTVLNSLISQSEQKIELFQVATLLWDVSGKQIDKFKSSFFDGSKDLYQTSWEFFQGSEIKGEVIGGNIRCFLKLAGTKYMPDLTNKILFLESQGGGKESLYSMFYQIKGLEDFDKVAGILLGTFTFYQKNYEQPIMLCQVKYYDTAY
>NZ_CP046246.1|WP_061840831.1|500775_501216_-|OsmC-family-protein
MAVELTKAEVTLESGLKVSCKSRGFEITLDEPEADGGTNTGMNPVEALLNSLGACLTIVAKSFARVKKINLKSFKVDLEGELDSDGYLGKNPNAKKGFSKIKTTFHVEADNTAEEIKDFIEFVIQTCPVHDTIVNTPDFETEIVTK
>NZ_CP046246.1|WP_061840830.1|500430_500688_-|DUF3290-family-protein
MNALLGTLFLLGIIGTWYFVKKRPNKQYRNISLGIALVAAVLIWFVPSSYFYFVSDNNMTKQPVEKVIKNGLKNENLSQNFVGEN
>NZ_CP046246.1|WP_131471581.1|517315_518215_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MPFTVITLKKVPNSLRGDLTKWMQEIATGVYVGNFNTKVRSQLWERVIQSVGTGEATMSYVYRNEIGYQFETLNTQRQVADYDGIPLVILPKLNDEISKTNYVKGYSNAAKFQKAKKYSKKHSPTNKPNYKYVVIDIETDGLNYNDNQIIEIGAVKMDGGELTNFHRLIKYDKELPSDITKLTGITQDLLAKNGQPLKNSLVEFVDFIEDFPIVGYGIDFDLRFLNKYLKDFDLFQLSNKPHDLIRYVKREKMLLTDYKLKTALISYGFDDYVPHRALEDAKIIYQLSTKVNKFLKAMN
>NZ_CP046246.1|WP_130706153.1|518214_519159_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MKKHNGAKKTELNELPRIGDRVTFIYVEHAKINRQDSAITVLDSKGIVRIPASMVGVLLLGPGTDVSHRAIELIGDTGTSMVWVGERGVRHYAHGRALAHSSRLLERQANLVSNTRSRLSVARKMYQMRFPNEDVTDLTMQQLRGREGARVREVYRKQSKLHDVEWTKREYNPDDFESGTPINQALSAAHVSLYGLAYSIIVALGMSAGLGFVHTGHDLSFVYDIADLYKADLTIPIAFEIAGDSLPDEDIGRKTRLRVRDAFVDGKIMKKIVKDLQYLMDIEADEEMFIDVINLWDDKEELVKHGVNYEEVPQ
>NZ_CP046246.1|WP_130706152.1|519162_519798_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSQVEVDTNNRYKIQDLTHLGAYHNWVEQSFPNEMSLKERSRKLWRIDQLKGKKYLLVVSPERPDLNLLETYGVEGSARTKEYDSFLNTLNVSTKARFKVVLNPVISKKQEGKVRGRVLPYLSEEDQLNFLFNRAEKNGFLLNAEDFFITERSFEVLKKSHQKDLRLSKVTYEGILEVSNVNTFRKTLTEGFGKKKAYGFGMMTVIPGV
>NZ_CP046246.1|WP_155224252.1|519799_520501_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTLLLKFSGPLQSWGTSSHFETRQTDRYPSKSAVIGMIAASLGYRRHEDEKIQELNDLNFGVRIDQAGENLRDYHIARKYKNNGAIDRTYVTDRYYLEDAIFIVAIGHEDEQFVEKIERGLKEPYFQPFMGRRSLPLPVDFFIESRKKDVVESLQQLPWKAAKWYKRTNSNQLTAYVDSDLVTSETIQMRQDRVKSFSQKNRLFGFRGEAQIKIDVENRFSDEHNAFDALGG
>NZ_CP046246.1|WP_130706150.1|520502_521588_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTNQHLFLDIHAIQTLPPSNINRDDTGSPKTAQYGGVRRARVSSQSWKKAMREYFHKNSAQSNVGVRTLEIVRYIADKIKSYDSSKEDSEAMELAERVLNEAKVKTKEQRAKALFFLGDTQAEKLAEAAVSGEKDKKQLQEILRDKPAVDIALFGRMVADDPSLNEDASSQVAHAISTHAVQTEFDFYTAVDDLAPEDNAGAGMLGTLEFNSSTLYRYANVAVHELLRQLNNKETAINTLRLFIEAFSNSMPTGKVNSYANQTLPQAIVVNLRTDRPVNLVSAFEEPVKASNGNVSVSIQKLFNELRKVEKFVKEPEYTFYLTMEDVENHDVDGVNEESLNTLLEHFAEVTNNLMPAEVGE
>NZ_CP046246.1|WP_130706165.1|521590_522181_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSTENSVFATIGKIIGKLDELRNNSSGKAALANLRNSIGRPLSETIDIWPIVFEQMPDSFLGRNGRLTNEERAILTTLQIYALHQQSRTESVNKRSEKGQWDNIGISLKFLRTGSETVAIDRRFNTMITSSSFEELTHHLRQLLRLLKAKNPEITVNYAQLGNDLYWYLRNKEEKVRLDWAKAFYSRREESDKGED
>NZ_CP046246.1|WP_155224253.1|522194_523895_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MGKFNLIDEPWVPVMTNDKGETQEVSLAEIFQNAQQYKALAGDSPTQDFAVLRVLLAILHTVFSRFDAEGNAYNYFEIDEQLRQITVIDEDDNDIEDYADALHDTWVELWEKKQCPSIVEEYLEQWHEHFYLFDDEYPFFQVTEKMMEPQNINKVKPSSVSGKNINRLISESGNKIALFSPKYEARKKKNKELLTAPEIARWLITFQGYSGLSDKVIFGDEKYKSSKGWLFDIGGTYLEGENLYDTLLLNLVLIDSQEIQLKKIQKPSWEYSDEELIKWYFSERKIDNIAELYTNWSRAIYINPEIDVNKPFEFNIVKLPDIDHQNQFVESMTTWRFNKSGENKNTYTPRKHQINQSMWRSFGLITLPHSDTEEQRRPGVMDWLDKIDKNIEEFEVKIQTVSMQDDGNATSWVPVNEINDSLKINDLVLTDVAQAGWLPRINEVIETTKTVIGYTYRTFMEDIRDIRQLSSNHQFVSRSVEELYYAVDLPFRNWLSSLQPSDSKVEQIFKWHAILKKIVDHQAEKTLENATYRDYVGIETDGEVENIITTYNRFKYYLNKRLEEGD
>NZ_CP046246.1|WP_130706164.1|523881_526647_-|CRISPR-associated-helicase-Cas3'
MVNINPYLWAKKIEKNGRLLWLPLSQHLEDTHRVSERLWELWLNNGQRKLIIDSLSYPTEEKAKQLVQFLGAIHDIAKATPAFQIKKGFANSTDLDIQLLERLERDGFNGITQLKLPSSNKSHHALAGETLLSWYGVNEDIHSIISGHHGKPVDKKKEYEQQSSYLENYFQEESPNSSIYQKWEEVQYEIFQWALKSSGFAHINDLPKITQQGQVILSGLLIMSDWIASNEEFFPLLTIDELETEDQEVRFANGWKKWFKSLPWEEKLYSEPEELYTKRFGFNTPRDVQKKLTNTIEETEDPGIFILEAPMGIGKTEASLVGVEQLAAKTGRNGLFFGLPTQATSNGIFPRINSWLTSIKDEIGENLPIRLAHGKAALNKEFSSLARNVDIDGEDNGSVFVNEWFSGRKTSALDDFVVGTVDQFLLLALKQKHLALRHLGFSKKVVIIDEVHAYDAHMGQYLMRAIQWMGTYGVPVLILSATLPAKSRKKLVKSYLRGKNEKVQKNQLETNFFQTDAYPLITYTDGKEIKQLQDFEKDKTKQVMVHRCDEDDLGQLLDNLTQGNGVIGIIVNTVRRAQKLARQCVEKYGSEYVELLHSNFIATDRMKKENELIEMIGKGAARPKQKIIIGTQVMEQSLDIDFDVLISDLAPMDLLIQRIGRLHRHDIQRPKPFTKAALYILGTNQELEFEDGAEFIYGGYLLTRTQHYLPDTLVLPDQISTLVQKVYGENVIEISAELEQKYTEMKNKHEENLKNKKDKANTYKLGGPARKTSRRKNTLIGWLDFSAKDKGEEHASAQVRDSQDTLEVIALKKIGDGYGTFDELYDLSNKIDDFNTAKEIAKHTLRLPYALSYPSIIDSTIEILEKENKKYLSVWQNQSWLKGSLGIVFNENNEYYLNGYTLHYDPKFGLIYDKEGKNGEI
>NZ_CP046246.1|WP_103099925.1|527764_528940_-|GNAT-family-N-acetyltransferase
MTIKKLQEENFTESYQLAHYAFRFADDQQHQEGFTTLFNHSNVYAAFNEQELASQMIATPLKVQLYNQLFDMAGIGFVSSDPSFRGQGNIDQLMQKMLVDCYENGILLSYLDPFSYPFYRKYGYELTFERICYDVESSAWPDSPKPKGYVRRKTWAQAKEAIKQIDQASSKHKHGGILREGWWYEYKFNISHSYYFAIYYNEEDRPEGYLVYKIKDGKFHCVRWVNLTESAYRGINRYISSHKDSTQRIIYEKGYAKNEDFFLNDNPIGKAEIRPEMMARIVDVESFLNKRLLKDVKKSFAITIEKDHYAPWNEGTFEIVNKKQVNIVKKEVNQTQLPQLKISIQRLTQLLFGYCSIDTLIFYDLVEIDEEIIETIRQLTPQQAPILEDYF
>NZ_CP046246.1|WP_155224254.1|529034_530288_-|PTS-transporter-subunit-EIIC
MDTFVRFMEEKFVPVASKIGAQRHLVAIRDSFMVTMPLMILGGLATMINNLPIPGFQELMNSIFANESWKGFGDSVWEGTFAVLSVMIAYLVAHNLSKGYGKDPVATGVVSVASFFALGGATGMSSTGLFVAIIVAIISTELFVRLIGNEKLVIKMPDGVPPAVAKSFAALLPAMIVISIFGLITAIFAAFGFDDIINSFYEAVQQPFMGMANTYWSALLLAFITPFLWFFGLHGANMIDPFMQTINAPAIEANINAISNGDVAPYIVNKPFIDSFVNLGGTGATLGLIIAIYLVGRRNKAYKVVNNLSVAPGLFNINEPMLFGLPIVLNPIMFIPFIIVPMVLVSVAYFATSIGLVPVSTVMPPWVTPPVIGGFLATQSFSGAVLAAVNLILSVVMYIPFVKMGVDQALKKIAEEE

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Crispr_ID: NZ_CP046246_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046246_3

745214-745302

Orphan

Consensus_repeat	Method
AGCCATTCATGTTGGGCGAGGGCACGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046246_3

>merge|NZ_CP046246|3|745214-745302|CRISPRCasFinder
AGCCATTCATGTTGGGCGAGGGCACGATTAAAAATGGAGAATTAGTTAAAGAAGAGAAAGAAGCCATTCATGTTGGGCGAGGGCACGAT

>NZ_CP046246|3|3|745214-745302|CRISPRCasFinder
AGCCATTCATGTTGGGCGAGGGCACGAT	TAAAAATGGAGAATTAGTTAAAGAAGAGAAAGA
AGCCATTCATGTTGGGCGAGGGCACGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046246.1\|WP_061841424.1\|743262_743784_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|377129
NZ_CP046246.1\|WP_069029375.1\|741550_742132_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP046246.1\|WP_061841426.1\|740715_741198_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|369157
NZ_CP046246.1\|WP_041591787.1\|735256_735883_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP046246.1\|WP_082786926.1\|745612_745735_-\|DUF2273-domain-containing-protein	unknown	unknown	unknown
NZ_CP046246.1\|WP_014124400.1\|735896_738140_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|223256
NZ_CP046246.1\|WP_155224310.1\|749465_750164_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235274
NZ_CP046246.1\|WP_155224308.1\|745748_746303_-\|alkaline-shock-response-membrane-anchor-protein-AmaP	unknown	unknown	gnl\|CDD\|380217
NZ_CP046246.1\|WP_094243722.1\|748058_748898_-\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP046246.1\|WP_103100343.1\|751323_751764_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP046246.1\|WP_061841427.1\|738921_740544_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200472
NZ_CP046246.1\|WP_061841425.1\|742270_743155_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP046246.1\|WP_155224309.1\|747326_747938_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046246.1\|WP_014124402.1\|734393_735227_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP046246.1\|WP_162302197.1\|751916_752348_+\|LytTR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197918
NZ_CP046246.1\|WP_069028772.1\|748944_749463_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NZ_CP046246.1\|WP_162302196.1\|750338_751265_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_CP046246.1\|WP_014124399.1\|738337_738841_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215180
NZ_CP046246.1\|WP_061841039.1\|746399_746894_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|377129
NZ_CP046246.1\|WP_014124403.1\|733900_734368_-\|tryptophan-rich-sensory-protein	unknown	unknown	gnl\|CDD\|320706

Protein	Function_ID	Function_description	E-value
NZ_CP046246.1\|WP_061841424.1\|743262_743784_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	1.30004e-32
NZ_CP046246.1\|WP_069029375.1\|741550_742132_-\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	9.6488e-50
NZ_CP046246.1\|WP_061841426.1\|740715_741198_-\|VOC-family-protein	gnl\|CDD\|369157	pfam06983, 3-dmu-9_3-mt, 3-demethylubiquinone-9 3-methyltransferase. This family represents a conserved region approximately 100 residues long within a number of bacterial and archaeal 3-demethylubiquinone-9 3-methyltransferases (EC:2.1.1.64). Note that some family members contain more than one copy of this region, and that many members are hypothetical proteins.	3.47799e-57
NZ_CP046246.1\|WP_041591787.1\|735256_735883_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.8477e-05
NZ_CP046246.1\|WP_162302197.1\|751916_752348_+\|LytTR-family-transcriptional-regulator	gnl\|CDD\|197918	smart00850, LytTR, LytTr DNA-binding domain. This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern.	2.40304e-19
NZ_CP046246.1\|WP_014124400.1\|735896_738140_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0
NZ_CP046246.1\|WP_155224310.1\|749465_750164_-\|triose-phosphate-isomerase	gnl\|CDD\|235274	PRK04302, PRK04302, triosephosphate isomerase; Provisional.	1.22029e-64
NZ_CP046246.1\|WP_155224308.1\|745748_746303_-\|alkaline-shock-response-membrane-anchor-protein-AmaP	gnl\|CDD\|380217	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP. The founding member of this family, AmaP (Asp23 membrane anchoring protein), is related to Asp23 through part of its length, but includes a highly hydrophobic N-terminal region that should make it an integral membrane protein. Asp23 (alkaline shock protein of 23 kDa), described in PMID:7864904, is a cytosolic protein in Staphylococcus aureus, strongly induced by a pH shift from 7 to 10, and also recruited to the membrane. AmaP appears to be the partner protein with an integral membrane segment and the ability to anchor Asp23 to the membrane. This model was built to identify full-length homologs of AmaP, while excluding Asp23. Some but not all members of this family score above the cutoffs of Pfam model version PF03780.11, but full-length homologs of Asp23 score considerably higher. Asp23 family members previously were known as DUF322.	1.1397e-40
NZ_CP046246.1\|WP_094243722.1\|748058_748898_-\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	3.77905e-105
NZ_CP046246.1\|WP_103100343.1\|751323_751764_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.81031e-06
NZ_CP046246.1\|WP_061841427.1\|738921_740544_-\|alpha-glucosidase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP046246.1\|WP_061841425.1\|742270_743155_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.01575e-46
NZ_CP046246.1\|WP_014124402.1\|734393_735227_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.88989e-23
NZ_CP046246.1\|WP_069028772.1\|748944_749463_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	8.16742e-38
NZ_CP046246.1\|WP_162302196.1\|750338_751265_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	1.42888e-80
NZ_CP046246.1\|WP_014124399.1\|738337_738841_-\|hypothetical-protein	gnl\|CDD\|215180	PLN02316, PLN02316, synthase/transferase.	0.00119567
NZ_CP046246.1\|WP_061841039.1\|746399_746894_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	6.47263e-30
NZ_CP046246.1\|WP_014124403.1\|733900_734368_-\|tryptophan-rich-sensory-protein	gnl\|CDD\|320706	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family. This family contains tryptophan-rich translocator protein (TSPO), an integral membrane protein that is highly conserved from bacteria to mammals. In eukaryotes, it is mainly found in the outer mitochondrial membranes of steroid-synthesizing cells of the nervous system where it transports cholesterol into mitochondria. It is known to be highly expressed in metastatic cancer, steriodogenic tissues, as well as inflammatory and neurological diseases such as Alzheimer's and Parkinson's. TSPO is also known as the peripheral benzodiazepine receptor (MBR) and its ligands include benzodiazepine drugs, implicated in regulating apoptosis. In human, a single polymorphism A147T is associated with psychiatric disorders; the mutation causes structural changes in a region implicated in cholesterol binding. TSPO is homologous to bacterial tryptophan-rich sensory proteins, and their tryptophan residues are believed to be functionally important. In bacteria, TSPO acts as a negative regulator of expression of specific photosynthesis genes in response to oxygen/light; it catalyzes a photooxidative degradation of Proto porphyrine (PpIX). R. sphaeroides TSPO (RsTSPO) is involved in porphyrin transport, similar to human, while Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism.	2.21879e-35

>NZ_CP046246.1|WP_061841424.1|743262_743784_-|Asp23/Gls24-family-envelope-stress-response-protein
MENKTNNSTTTTQQISGELTFADKVIQKIIGLALADIDGLLTIDGGFFSNIAEKLVNTNDVTTGIHTEVGTKQVAVDMDIVVEFGKDVRKIYDEVKKIISSEVSEMTHLEVIEVNVNVVDIKSQEQYQEESETVQDKVSGAASSTGRYLSKQTNKATKKAKNEVQSRTEPRVE
>NZ_CP046246.1|WP_061841425.1|742270_743155_+|LysR-family-transcriptional-regulator
MEIRLLRYFVAVASQQTISAAAQQLHLSQPTLSRQLSDLENELDTTLFIRGNRKISLTADGQYLLKKAQEIIQLTDKTTANFKQKDETLSGEIYIGAGETKGIQVVAQALKKLLQNYPAIQFHLYSGNADDIMNKLDSGLLDFGIVIEPADKQKYDYMHLPESDTWGVLMHKDSPLASKEEIRPEDLHNKALIISRQTTVDSELSSWLGQEITNLNIVGTYNLLYNAAQMAKEKLGYVLCLDRLIDTSIDSSLVFKPLTPNLEASLNIIWKKNQFFSTAAQEFLQELRKTIENE
>NZ_CP046246.1|WP_069029375.1|741550_742132_-|acetyltransferase
MELTELLSRFAKEQVIYPNTEVHRAMTKVSSEARYLSTKLNNGVYTDEQIKAQMTQITGQELDEGFSLFLPFTSDFGKNIKIGKNVFINSGCRFQDQGGITIGDQCLIGHNVVLAIINHDYHPEKRGIMHLRPIVLKEKTWIGSNATILPGVTVGENSVVAAEAVVTKDVPANTIVGGNPAKFLSNLADKIEE
>NZ_CP046246.1|WP_061841426.1|740715_741198_-|VOC-family-protein
MQKIVTNLWFDTQAEEAAKFYTSLFEEGSIHNITYYGSSGAKVSDMPEGTVLTVEFSLADQEYIAINGGPMFKFTPAISLMVNCDSQEEIDRLWEGFCEEGQPEECGWLTDKYGLSWQIVPSELNELLSNPEPEKEENINRALFSMKKLDIEQLRKAVLE
>NZ_CP046246.1|WP_061841427.1|738921_740544_-|alpha-glucosidase
MVQHWWQEIVVYQIYPRSFNDSNGDGIGDLQGIIEKLDYLKELGIGAIWLSPVYQSPNDDNGYDISNYEAIMDEFGSMDDMEELLAQANQRGIKIIMDLVVNHTSDEHAWFIEARKDKNSPYRDYYIWANPAADGTTPNDLTSFFSGSAWKFDEETGQYYLHFFSKKQPDLNWENEKVREEVYHMMNFWIDKGIGGFRMDVIDLIGKVPQEKISTNGPKLHDYLQEMNQKTFGKYDLLTVGETMAATPENAKLYSKPERKELSMVFQFQHMNLDIQANGEKWDLAPLDVAKLKEVLAKWQKELGDEGWNSLYWNNHDQPRIVSRWGDDDKYRVQSAKMLAILLHMMKGTPYIYQGEEIGMTNTPISDISEAADIESINMYHERLAKGYDKKDILASINAKGRDNARRPMAWDSSTNAGFTSGKPWLALNDNYKDINVELALKGPNSIFYTYQKLIQLRKENPIMIWGSFQLVDTVDEVFSYYRKYKGQRWLVVTNFSSEVQPFSSEDEMKKVIIQNTVDEFTTLENINLQPWQAFVVEVE
>NZ_CP046246.1|WP_014124399.1|738337_738841_-|hypothetical-protein
MKSLKVTTLVLISTMLLAGCTQQTSTENNEDKEVAATSETAESTEQTSTETEQSSSISSEAMEESTEETEEASTEEETAETSTDESQNSDAENDVADFEEGDILQDTIDLEGLTMETATDNPNKRVLLFSNDEGQKEYKSVFIKRTNRLKIIDTANDDLLLNEELDI
>NZ_CP046246.1|WP_014124400.1|735896_738140_-|excinuclease-ABC-subunit-UvrA
MEYIKIKNAKQNNLKDVTVEIPKHQLTVVTGVSGSGKSSLVFDTLAAESRRELNDTFNSYVQAYLPKYGRPEVEKIENLPVSIMIEQQKVSANSRSTVGTYTDIYTFLRLLFSRVGKPFIGYSDTFSFNHPDGKCPTCDGLGKVTEIHLHQLVDFNKSLNEDPIDFPTFHKGKWRWKRYANSGLFDLDEKIKDYTPEEQDLLFYAPRQQIKNAPAEWPHTALYEGIVPRVQRSIIHSDEGRRHQKQLDRFVTVKECPDCHGSRVNEKVRSCKISGKNIADVVSMSLEQLKEFVTAISDPLAVNVKSEIMLRVQALIDIGLSYLTLERATGTLSGGEAQRIKIAKYINSSLNDIMYILDEPSAGLHPQDIERVSQALIAIKNKGNTVVLVEHHPQLIQMADYIIDIGPKAGENGGAVQFAGPYSEFLQSNTITSRALHEKVPLNDSPRTSENTLSIKNADLHNLKNLSVDIPLGVLAVICGVAGSGKSSLASVIYQKIMQQDKEMVYISQKNIGVNLRSTPMTYLNIFDKIRSLFAKENNVSPAWFSYNSKGACPRCKGKGIIVSDMSFMEDVTTVCELCHGARYNEEATQYFYQGKTIVDVLDMNVNESFAFFKDQPFAQELKQLLDVGLGYLKLNQSLTTLSGGELQRLKLADNLHREGTIYLLDEPTDGLHLDDIQQLLDLFEQMVDEGNSIILLEHHISVIKRADWVIEIGPEGGDKGGYLTFSGTVQDLAKTDNTVTAPYLVN
>NZ_CP046246.1|WP_041591787.1|735256_735883_-|GNAT-family-N-acetyltransferase
MPKNRLTFHTVRGLDGELEQALKLFVETFKTEAITAHTYNFNHELTEKQYYKASLLNAKLYIEQGHDIMVAKIDDTIVGVSIMKKTSQKSLIHTLRFVFPEVFELLPLLTKIKYRNAFSMSKTMKLTHPLKENYVTLAAIAVTSNYQGKGVGKQFLNEIHQRYKKDFESIYLYTADEKNKNLYSHIGYEMVEHKQASHFSVYHMIYRF
>NZ_CP046246.1|WP_014124402.1|734393_735227_-|class-I-SAM-dependent-methyltransferase
MFYNLKESLEKPALYTKSKEAFWDDEYISKQMLKAHLDPDFSGASRKFSFIEQSVSWIKEKIPAQTYPKLLDIGCGPGIYAEKFALENYQVTGVDFSKRSIDYAKKSAQQHGLANIYYYQDYLAMDLKQSFDLATLIYCDYGALSTKDRQTLLDNIYQHLKPGGKLLLDVFSQKFYQQFQEEQKWENCENGGFWRPDEYIALYGNYKYSNDVTLEQTTIVSDTEITPYYVWNTCFTKDALIKEMQEAGFEFCEIFSDVTGRAYNEENKTMAIIIEKN
>NZ_CP046246.1|WP_014124403.1|733900_734368_-|tryptophan-rich-sensory-protein
MRKWVVWLISVVGIELTGIISGFFAGDIQSVYQQLQKPPLSPPGSIIGTIWTIIYALMGTALFLLIVSKVSKKMKASAITLFAIQQILNFSWSILFFGGNHYWIATLVIIVLIALIIFCMRVFYYINKAASFLFAPYLIWCLYAGYLCLGLAILN
>NZ_CP046246.1|WP_082786926.1|745612_745735_-|DUF2273-domain-containing-protein
MQGLFQRYRYGIIGGGIGLILAVLLLTIGFSETLLLLNDL
>NZ_CP046246.1|WP_155224308.1|745748_746303_-|alkaline-shock-response-membrane-anchor-protein-AmaP
MGKIRKLLFSIVLLGLLITFFFVLIENQQAIYLPVYFISMDNYPLVGPYIQIILFCLSVFFIGLAILLMLVTIFYPKKSNTLVIKGKNGRLSVRKSVVENFVLETLKKEPSIEDPRVKVKMSKKKIKIKIVGALRKTMRTTEKQNELVEQIRHEVSDLLATDAIKTEVYLKDEQENAGPRNRVE
>NZ_CP046246.1|WP_061841039.1|746399_746894_-|Asp23/Gls24-family-envelope-stress-response-protein
MEDRSQASGELTFNDKVIQKIIGIAMEQIDGLLNVQGGFFSSVADRISNTENVTAGIDTEVGKKQVAVDMQIICEYGRDISAIYEQIKQVITTEVKKMTRLDVIEINVNVADIQTQEEYEQNKETLEDKANEIADYTSEKTEQAAGKINEGLEKSETKNKPEVE
>NZ_CP046246.1|WP_155224309.1|747326_747938_-|hypothetical-protein
MDIVSILNAVGSIGTLIMAFFYFVSVSIQLYQMRLGFYPALGFEQTFIIHENGKFKLQNAVDLLKIGEESIDYFSLYNLGGGTAKNINIDIYLDNEQLQNKYVHILPGNESYLLPVNDRVHDGLKQALIEKEQTTELTIDMQYKSSIRQKWQHATLVAQFDAFNDNDAQKTIFEVQFVNTDSEDYNDNDNAQQNTESTNGSQS
>NZ_CP046246.1|WP_094243722.1|748058_748898_-|class-II-fructose-bisphosphate-aldolase
MLVNSKNALLTAKDENFAIPATNFIDLDSARSYVKIAEEKGLPLILAYAQSHSEILAIEEAALIGKFFAEKSHVPIILHLDHGEDTDFIFKAIELGFTSVMIDASRESFADNIAITKRVVEYAHQFDVTVEAELGHVGSNDFSESPTLTDSIYTEVEDVLAFVDQTNVDSLAISIGTAHGIYKGAPTINFERLEEIDEMTTIPLVLHGGSSSGDSNLNRCATHGISKVNIFSDFINDAFYAIQKKQPEDYLQLKNIANQTMLAVLNHYYDVFATRPISV
>NZ_CP046246.1|WP_069028772.1|748944_749463_-|YjbQ-family-protein
MKIEHGSLKVESNGSKVTYSDITDQVRQEIQEAGVQDGLCVVSSQHTTCSVIFEEFVHDKDWNGDELLQVDLNRILDKLIPRQLTESDYLYPGQDHVQFLEELSQQTPEYPNDLTTILNADAHLRASLFGSSQTLIIKDGQPLIGSVGYIYFVDWDQNRKRHRTCNLLIMGN
>NZ_CP046246.1|WP_155224310.1|749465_750164_-|triose-phosphate-isomerase
MKLQAPFFTFNPKSYFYGKKLLELAQKADTLAQKYPHLTILITAPYADLANIASHTQHIIVTAQHMDGIDPGRGMGAVLPESIYQAGTRAVFLNHAEHPLQLTELIQSMKKAKELGIKTIVCANYLEEARSIALLKPDVLLCEPTELIGTGQASDESYIQETNHAIKEIDPDIYILQAAGISTPEDVYRTLKLGADGTGCTSGITEADLPSQMLEEMIESVQRVYEEGKDGR
>NZ_CP046246.1|WP_162302196.1|750338_751265_+|winged-helix-turn-helix-transcriptional-regulator
MNNRNKMIVQAALLFYKENVNQTEIAKQLNVSRPTVATLLKEAVDRGIVKISIQDSEIMNFEQQEILAKKYGLKTVLISSATASEEEAKQEVGNLCATFVENNLKRIKNLGIGWGSTLNKFAEAASYHHFEDLSIVPLIGGVDVSNVKNQSNHLAFILSQKYNCHIDYFYAPAIAESLEMKEAFDQSQFIRDIIQKGKNVDMAITAVGNPIESSSYRKLGYFSEEDAHEMKEKNVIGDILATFFNKNGERVPTNISKKMIGVNLDDLMNVPEVVVVASGKEKAPSIQHLLKQPIIDHLIIDSEIATTL
>NZ_CP046246.1|WP_103100343.1|751323_751764_+|GNAT-family-N-acetyltransferase
MTKVWNDVLKDGDAFPGEELFTEEEFETYVAEQTIVRCMIIKEKLAGFYVLHPNNIGRCSHVANASYCIDKSYRGRKIFSNLVEDSLIQAKAQGFIGMQYNAVVTSNLPAIHTYQKNGFTTVGTIPAGFRLKDGRYSDMYIMYKDL
>NZ_CP046246.1|WP_162302197.1|751916_752348_+|LytTR-family-transcriptional-regulator
MKVKLELDQDLDKEMIILKTKKQSSEIKEIVAYIEQKSTPLVGKKQDKNYRIAINDFVNFYSSQKKVFGHTKDQEYIISYRLYELEEQLPHSFVRISNTEIINLNYVQHFQLSKSGLILIRLSNGHMTSSSKRYLKKVKERLL

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Crispr_ID: NZ_CP046246_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046246_4

1032915-1034309

TypeIII

Consensus_repeat	Method
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	CRISPRCasFinder
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	CRT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	PILER-CR

19 spacers

cas1,cas2,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6

The CRISPR arrays of NZ_CP046246_4

>merge|NZ_CP046246|4|1032915-1034309|CRISPRCasFinder,CRT,PILER-CR
TTCTCAGTCCCCTAATGATGGAGTTAGGTATCTATTTGATAACTGGCAACGAATTAAAGCAAAGCAACACATAGGTTCTCGCCCCCTAATAGTGGGATTAGGTATCTATTGTTTTTCCAATAGCTGCAATTTCATTTTGGTTTCGTTCTCGTCTCCTAATGATGGAGTTGGATATTTATTCAAAGCTACCCAGTATTATATTATTTAAAGAAGCCGTTATCGTCCCCTAATGATGGGGTTAGGTATCTATTATGCTGTTAGGCACAACTTATGGCCAGCTCAGAAAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTGAACTAAATAATGAATAGCATAAAAGAAACACTAAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTGACAAAATTAAAGACTTGTTAGCCAGTGATTTAACGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTATGACGTTGAAAGTAGCTAGTGAATTAATGAAAATCATGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTTTAGTCACGCTGCTTCTGATGGTTCAATTGATAAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTGCTGCTTTTGCAAATAAAGAAGACGCACCAAAAACAGGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTTTATATCATGGTGCTTTATAAAGGAAAATGTTTGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTATTATGACGCTATTCCCATTACACGTCGAAATGTGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTAAAAGATTGTATGAACGAATTGCTTCTGACATGGAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTGCAATTATTGTGTCGGTCGTTTCTCCATTATCTTTGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTTTGCTTTTCAACCACTGGCAGTAAATGGACTTGTGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTAAGAGAAAAACCAACTGAATATAAAAATATGGTGTAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTGACTTTATTTAAAGTATTTAACGCTGATCAAGAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTTCCTACTTATACAGTCGGGAAGTTATTCCCTTATGAGGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTATACCTAGACGGAGACGGGCAAAGGTCAGGGCTAAAGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATTACACAAAAAATAAATTAATGGAAAAAGTCAACTGGGTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT

>NZ_CP046246|4|4|1032915-1034309|CRISPRCasFinder
TTCTCAGTCCCCTAATGATGGAGTTAGGTATCTATT	TGATAACTGGCAACGAATTAAAGCAAAGCAACACATAG
GTTCTCGCCCCCTAATAGTGGGATTAGGTATCTATT	GTTTTTCCAATAGCTGCAATTTCATTTTGGTTTC
GTTCTCGTCTCCTAATGATGGAGTTGGATATTTATT	CAAAGCTACCCAGTATTATATTATTTAAAGAAGCC
GTTATCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATGCTGTTAGGCACAACTTATGGCCAGCTCAGAAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GAACTAAATAATGAATAGCATAAAAGAAACACTAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GACAAAATTAAAGACTTGTTAGCCAGTGATTTAAC
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATGACGTTGAAAGTAGCTAGTGAATTAATGAAAATCAT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTAGTCACGCTGCTTCTGATGGTTCAATTGATAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TGCTGCTTTTGCAAATAAAGAAGACGCACCAAAAACAG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTATATCATGGTGCTTTATAAAGGAAAATGTTT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATTATGACGCTATTCCCATTACACGTCGAAATGT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TAAAAGATTGTATGAACGAATTGCTTCTGACATGGA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GCAATTATTGTGTCGGTCGTTTCTCCATTATCTTT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTGCTTTTCAACCACTGGCAGTAAATGGACTTGT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	AAGAGAAAAACCAACTGAATATAAAAATATGGTGTA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TGACTTTATTTAAAGTATTTAACGCTGATCAAGA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TCCTACTTATACAGTCGGGAAGTTATTCCCTTATGAG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATACCTAGACGGAGACGGGCAAAGGTCAGGGCTAAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ACACAAAAAATAAATTAATGGAAAAAGTCAACTGG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT

>NZ_CP046246|4|2|1032915-1034309|CRT
TTCTCAGTCCCCTAATGATGGAGTTAGGTATCTATT	TGATAACTGGCAACGAATTAAAGCAAAGCAACACATAG
GTTCTCGCCCCCTAATAGTGGGATTAGGTATCTATT	GTTTTTCCAATAGCTGCAATTTCATTTTGGTTTC
GTTCTCGTCTCCTAATGATGGAGTTGGATATTTATT	CAAAGCTACCCAGTATTATATTATTTAAAGAAGCC
GTTATCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATGCTGTTAGGCACAACTTATGGCCAGCTCAGAAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GAACTAAATAATGAATAGCATAAAAGAAACACTAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GACAAAATTAAAGACTTGTTAGCCAGTGATTTAAC
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATGACGTTGAAAGTAGCTAGTGAATTAATGAAAATCAT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTAGTCACGCTGCTTCTGATGGTTCAATTGATAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TGCTGCTTTTGCAAATAAAGAAGACGCACCAAAAACAG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTATATCATGGTGCTTTATAAAGGAAAATGTTT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATTATGACGCTATTCCCATTACACGTCGAAATGT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TAAAAGATTGTATGAACGAATTGCTTCTGACATGGA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GCAATTATTGTGTCGGTCGTTTCTCCATTATCTTT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTGCTTTTCAACCACTGGCAGTAAATGGACTTGT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	AAGAGAAAAACCAACTGAATATAAAAATATGGTGTA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TGACTTTATTTAAAGTATTTAACGCTGATCAAGA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TCCTACTTATACAGTCGGGAAGTTATTCCCTTATGAG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATACCTAGACGGAGACGGGCAAAGGTCAGGGCTAAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ACACAAAAAATAAATTAATGGAAAAAGTCAACTGG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT

>NZ_CP046246|4|3|1033130-1034309|PILER-CR
GTTATCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATGCTGTTAGGCACAACTTATGGCCAGCTCAGAAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GAACTAAATAATGAATAGCATAAAAGAAACACTAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GACAAAATTAAAGACTTGTTAGCCAGTGATTTAAC
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATGACGTTGAAAGTAGCTAGTGAATTAATGAAAATCAT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTAGTCACGCTGCTTCTGATGGTTCAATTGATAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TGCTGCTTTTGCAAATAAAGAAGACGCACCAAAAACAG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTATATCATGGTGCTTTATAAAGGAAAATGTTT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATTATGACGCTATTCCCATTACACGTCGAAATGT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TAAAAGATTGTATGAACGAATTGCTTCTGACATGGA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	GCAATTATTGTGTCGGTCGTTTCTCCATTATCTTT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TTTGCTTTTCAACCACTGGCAGTAAATGGACTTGT
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	AAGAGAAAAACCAACTGAATATAAAAATATGGTGTA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TGACTTTATTTAAAGTATTTAACGCTGATCAAGA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	TCCTACTTATACAGTCGGGAAGTTATTCCCTTATGAG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ATACCTAGACGGAGACGGGCAAAGGTCAGGGCTAAA
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT	ACACAAAAAATAAATTAATGGAAAAAGTCAACTGG
GTTCTCGTCCCCTAATGATGGGGTTAGGTATCTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046246.1\|WP_155224383.1\|1020477_1022655_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|372509
NZ_CP046246.1\|WP_155224390.1\|1031964_1032873_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP046246.1\|WP_155224388.1\|1030415_1030742_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775
NZ_CP046246.1\|WP_094243904.1\|1025874_1026360_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046246.1\|WP_155224387.1\|1027805_1028264_-\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP046246.1\|WP_155224389.1\|1031658_1031964_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09638_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_CP046246.1\|WP_155224384.1\|1022897_1024328_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319
NZ_CP046246.1\|WP_155224386.1\|1026484_1027591_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP046246.1\|WP_083207540.1\|1041032_1041779_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|273848
NZ_CP046246.1\|WP_014123593.1\|1018881_1020240_-\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_CP046246.1\|WP_069028523.1\|1043238_1044561_-\|IS1380-family-transposase	unknown	unknown	gnl\|CDD\|379340
NZ_CP046246.1\|WP_155224396.1\|1038751_1041040_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP046246.1\|WP_155224392.1\|1035704_1036718_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_CP046246.1\|WP_155224397.1\|1045129_1046074_-\|acetamidase	unknown	unknown	gnl\|CDD\|225279
NZ_CP046246.1\|WP_155224395.1\|1038314_1038743_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_CP046246.1\|WP_155224398.1\|1046353_1047715_+\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_CP046246.1\|WP_155224393.1\|1036735_1037632_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|380071
NZ_CP046246.1\|WP_069028523.1\|1028467_1029790_+\|IS1380-family-transposase	unknown	unknown	gnl\|CDD\|379340
NZ_CP046246.1\|WP_162302199.1\|1034455_1035703_-\|type-III-A-CRISPR-associated-protein-Csm6	csm6	cd09699_csm6_CAS-III-A	gnl\|CDD\|187830
NZ_CP046246.1\|WP_155224394.1\|1037628_1038303_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815

Protein	Function_ID	Function_description	E-value
NZ_CP046246.1\|WP_155224383.1\|1020477_1022655_-\|AAA-family-ATPase	gnl\|CDD\|372509	pfam13166, AAA_13, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.	6.10784e-112
NZ_CP046246.1\|WP_155224390.1\|1031964_1032873_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.5911e-91
NZ_CP046246.1\|WP_155224388.1\|1030415_1030742_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.93757e-15
NZ_CP046246.1\|WP_155224387.1\|1027805_1028264_-\|PTS-transporter-subunit-EIIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	9.54705e-37
NZ_CP046246.1\|WP_155224392.1\|1035704_1036718_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.72943e-17
NZ_CP046246.1\|WP_155224384.1\|1022897_1024328_-\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	5.35014e-19
NZ_CP046246.1\|WP_155224386.1\|1026484_1027591_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	6.75919e-19
NZ_CP046246.1\|WP_083207540.1\|1041032_1041779_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	2.71686e-14
NZ_CP046246.1\|WP_014123593.1\|1018881_1020240_-\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.58106e-14
NZ_CP046246.1\|WP_069028523.1\|1043238_1044561_-\|IS1380-family-transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	0
NZ_CP046246.1\|WP_155224396.1\|1038751_1041040_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP046246.1\|WP_155224389.1\|1031658_1031964_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	1.08766e-14
NZ_CP046246.1\|WP_155224397.1\|1045129_1046074_-\|acetamidase	gnl\|CDD\|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	1.13526e-97
NZ_CP046246.1\|WP_155224395.1\|1038314_1038743_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	4.01481e-23
NZ_CP046246.1\|WP_155224398.1\|1046353_1047715_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.4319e-16
NZ_CP046246.1\|WP_155224393.1\|1036735_1037632_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|380071	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain. Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interference complexes with CRISPR-associated (Cas) proteins to target the invading nucleic acid for degradation. The interference complex of the type III-A CRISPR-Cas system is composed of five Cas proteins (Csm1-Csm5) and a crRNA, and targets invading DNA. This entry represents the C-terminal domain found in Csm4. Csm4 structurally resembles Cmr3, a component of the type III-B CRISPR-Cas interference complex. Studies indicate that Csm3-Csm4 complex binds single-stranded RNA in a non-sequence-specific manner. Structural analysis show, Csm3 and Csm4 have one and two ferredoxin-like folds (also known as an RRM-like fold), respectively. The long beta-hairpin inserted into the C-terminal ferredoxin-like fold of Csm4, is well-conserved in the Cmr3 structure. The corresponding beta-hairpin of Cmr3 binds the D1 domain of Cmr2, as observed in the Cmr2-Cmr3 complex structure. Furthermore, it is suggested that the hairpin of Csm4 is responsible for the interaction with Csm1 (ortholog of Cmr2).	1.38694e-34
NZ_CP046246.1\|WP_069028523.1\|1028467_1029790_+\|IS1380-family-transposase	gnl\|CDD\|379340	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	0
NZ_CP046246.1\|WP_162302199.1\|1034455_1035703_-\|type-III-A-CRISPR-associated-protein-Csm6	gnl\|CDD\|187830	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems.	8.33177e-72
NZ_CP046246.1\|WP_155224394.1\|1037628_1038303_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.88215e-80

>NZ_CP046246.1|WP_155224390.1|1031964_1032873_-|type-II-CRISPR-associated-endonuclease-Cas1
MRDCIYVEHQNFVSVVTNSFKFVNVVSKETTYIPFSEVECLIFENELSYFSKKLVSKCMEENIALLFCDKKHSPVTMLTNDFGHSNRLKRLNLQMSLGNKVKKRLWRKIVIGKINNQAVNLQLLTENNDMGKMLVLASKQVDEGDTKNREAYAARRYFTTLFGPNFKRGRYDDVVNASLNYGYALIRAMIRREIAVHGLEASVGIHHQSIENAFNLSDDLIEPFRPFVDSYVYENIFNEGALTLELGEKKALLNILLENCIIDEKVCTVTDAIKVAVTSFVSCLDKNSSSPLKLPSFIEVGK
>NZ_CP046246.1|WP_155224389.1|1031658_1031964_-|CRISPR-associated-endonuclease-Cas2
MMLLVCFDLPRTTRVERKQANKYQKKLVELGFTRKQFSLYEREIKQKKTREKVIEVLRTELPSTGMITLYLLPNEVNDKQITILGENAVKRTIRKPRIVFL
>NZ_CP046246.1|WP_155224388.1|1030415_1030742_+|helix-turn-helix-domain-containing-protein
MKLSQLDKVGPHVAAYRNKAGLTQQQLATETGLSPQFIGFIENGNRNISLQTLIKITNVFGVDVITFLSPFEQQDENLGQLIQKIEHSSKKDSYIQMFNNILDTADNE
>NZ_CP046246.1|WP_069028523.1|1028467_1029790_+|IS1380-family-transposase
MSFTLQQNSLTFNKQKAILIANDGGTLTNDAGLVLLSEFLNQIRFDSLLAQYVHIPEYRAFAQHEWLDVVKQWLYQLIAGYSRDRDANILQYDRLFKEALKQERLSSQFMMSTLLHTLTEENVNQLLQVAKKLGDLGMDQQNSQQLVLDLDSTCCPTYGKQEAGEYIYHYGLNGYHPFVAFEGLTGLALDVRHRHGKSYTSTHAEDYLVEMLAHYQQRSSDPTMLVRGDSGFAKPEIYKQCECRGAHYVIKLKNNVRLIHYAQHLVQYTNGTDYTKSEHQYFKMAYQADSWDRSRTVAIKATRKAETLLFSEFQFVVTDFAHLSPQTIFQLYQKRGNMENFIKEMKTGFFADKTDSPSFLANKVRLALSFIAYNIIHLMKQLTFPQEKKTTVIDTIRFQLFHIAGKVTEHARQVQIHLSSTNVYNTLFWEVLTRIQRLNL
>NZ_CP046246.1|WP_155224387.1|1027805_1028264_-|PTS-transporter-subunit-EIIA
MFDFSFLPELIIPNLAVNNKEEAITYLSKLLEDSRLVERNYKNDVLSREKEFSTGLPVKNGAIAIPHAKSTHVFNNGVAVGTLKKSVYFNSMEDSNLEIPVDMVMLLAISESDKQLKMLQAIMRLLSNEEIIDTLKNKKGSKDIAKQFTKLI
>NZ_CP046246.1|WP_155224386.1|1026484_1027591_+|IS4-family-transposase
MDKYKTISAFNKWFSNINFKKLPFSIREKISQVDKYHKKFAFEHFLKVFLYGIDHECESLREMDTAFVSPDLQQTMALDAISHSQLSRELAQMDDEILWAIFAQLLEKARSKTPVTKRNALYLVDSSTFPLNTTRYPWADFRSTKAGIKLHLKLCFMDKEHLYPDQFEVTNAVEHDDNHLEVFVNQPEATYIFDRGYIDYERLDEMEADGYFFVTRVKKNTKIHVRETYDTSQSKNILRDQMVVLGTQVYLTSPFRLVTIQDEKGKQLRFVTNRFDVTAQEVADMYKARWQIELFFKHIKQHMTIKKLFSHSEKGVSNQIILAMIASLLTYLLKVETGSKKSPFQIKRLLKHLLFQPFEELWVLLVPT
>NZ_CP046246.1|WP_094243904.1|1025874_1026360_+|hypothetical-protein
MFLPMLISFFGNQSKAIKAAEIEMSKRIIELSENQIEFNMDDAIKIIKSVSFEKEIDVTKVRQRFERAGHIAFDKINIRKHTDFLAGLLTVMEKMPGLPDKIKLYDIIAFVSEIATCIISFVWIFSNTSTLYISIPLSMIAGCQVGVLLNNFSNLLKKRIV
>NZ_CP046246.1|WP_155224384.1|1022897_1024328_-|IS5-family-transposase
MYKSQPYVQISFEDFNQPLGLHMNPENRWVKKAEQIPWGQLEKDYAKNFPNPKGNVAKSLRMALGALLIQKEYHYSDEETVAQIQENPYLQFFVGLPGYQEEAPFEASSMVHFRKRLDEVTLMQINEKILSYNQKDDDDPTPPTDGSNSGTLTLDATCAPQNIKYPTDTELLNDARTHAEKIVDSLCQDYQWKKPRIYRQLAQKVYLNIVRRKKKAKKWLRKQIRKMLGFVKRDIQVIQKFLDRGAQLIEQQAIWWTTIQNIYEQQRYMYDNHTHSVQDRIVSFHQPWLRPIVRGKAKASVEFGAKFDMSLDQGIARLEYSSFDAYNESDILISTIRRYHDRHGNYPERVLADKIYRNRKNLNYCKQRGIRLSGPALGRPKKNEVRDKTIDEQDNADRVAVERGFSQLKGCFGADLITTKRKDTTLSSIALSVLALNLSKLTADALRQILSNVFKSRQIKNWTLYFSFFTKFTIIQ
>NZ_CP046246.1|WP_155224383.1|1020477_1022655_-|AAA-family-ATPase
MVSIVNLSETNFLSSEEEVLELKRINFFYGKNGTGKSTLCTIIREQLKNKFDVRIFQGFESVLGENRKLNAVILGEENNKIQEQIDEKEGSIKKIDKQINDKVNILNGLNGEESTEKNPLLLNYEKISQDLESKAKEISLFCTDSARKLTKQFNLGRTYDKNKFYKEIPEAQKLTDEEKDKLEKTINETAKEKNGYISLPKANLELFLKSVNEILQKKVEPKIIVEELENDGEKQEFAKKGLELHEGEDFCTFCGGKITESRRNELKTYFEADEVVELQERVEKGMSKIKQLLEEVKNIKTIDQKQFYAQFDVKDLNQELEEKKREYTDFLIQCKNKLDIKQKNLFKTVDSLNIETPNNFMGIQKQINDFIDRNNNFTQNIDGQKEDAERRLRLNSVSVFCEQGNYDSLTAEQTTLSDMLKKAKENLDNEIGKIKSEKKKIEEYRSNEYAAIKELQTKIKNPEIITQRINSKLKDSGHSNLRLKYNNQEKHYQILNDDETTRDITEISTGEKNIISFLYFIASLDSLDLETGAPKLIIFDDPMSSNDDTMQYLIITEIEKLYNKKNFYEHFILLTHNSHFYLKASFDRKRRRDGKNPYEIDNFVRMNSDGKSTTFKYLTDEKEDFSTQYGSLWKELKFLFDHDKKDFMCNTIRRIIETYTVFNGVKGNKHAESKLLFNTNSHSTEVGDLETDTNGYTREQIIEFLKQYFKQHNAEVHFNSYWKSK
>NZ_CP046246.1|WP_014123593.1|1018881_1020240_-|transposase
MIHLKAIKNQLPNEVKATFSELKVPSFLRQAHIHKQKGYSVAVIFTFLFSLVFKGKSLHQVLSGREADQWMKKDTVYRLMNDPHNNWRTFLLRFSTSVIEKIHRLTDPQTHLRTLILDDSTFYRNRSQKVPGLARLWDHALQKGYKGYRMLTLGFSDGYSFLPIDFSLLSGNKKVQPTISVQDQRTVGARRFKEAQRPMPEVAVEMVARALDQGIYATHVLMDKWFTCPKMIDRLHDLGIHTIGMMKNGKTKYLYQGRFYKLSELYQKSTEEVTAEAILSSIIVQPCAGQHPVKIVFVKNHSKQSAWLAIMTDDLTLSSQEIVKTYSLRWDIETFFKASKSLLHLAQETQTRNYQALLCHTTIVFTRYILLSWQQRCANDERTLGGLFYELADQMKELDWSVALLELVKIIQAVSEKAESTLQDFIESQLQHWIDTLPNYIKGYLPNLVCET
>NZ_CP046246.1|WP_162302199.1|1034455_1035703_-|type-III-A-CRISPR-associated-protein-Csm6
MQTLISCVGDTDPIRNFYDSPLLHIARGIRPEKIVIVHSERSQEKHDNIVQALNSIPDYYPEIVTDKRTIKNTDIFLFDKMFEVLSKIIQEYARSEEEIILNLTSATPQIISAMFSINRISGLNVRAYQVATPSNTSNEGIKHNNQQDIQQLIESNKDNRKDYNNRLIEDKAEKFQQLLVRKTFLDLIREYDYEGAVQVISGNDLMLSKKKKGKLHHELDNLIKSIKTQNLLPEVENSEFDVSQKTILNAYLLISLQAKRELNTEVLIRVKNFAEFIVEMYLDKNYNGLIVRYDGKPYLNTEGFEDVILKLQYSLKKAGNELNTDRYLSLPLYAEIIRIIQPDSSLLKLIDKVNGVNTFRNQVAHGFKSINMKNSRVKDLAETCWMLLLIVNDVDEKWRSYFEDKNKVFKEMISY
>NZ_CP046246.1|WP_155224392.1|1035704_1036718_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MEKRKRYELTLRTMAPLHIGSGTTYTQKEYIYENGYYYFPDMGILYKKLQKQGEKKDRIFEDFLMKNGHTNSRRPRLVQFLNDQQIRERNFSGYQIKETGFELEKKKSARGNLNDISAFVKDAYGYPYIPGSSLKGAIRTILVNEYFRRDDIPWGPKQQDIFHQIRVSDSEPININQLILAQKWDFSPKKLTARSLPIHRESLKPMSVATFIITAVGEQAIELMDQLPQFAKEYYQKYTNQFLSDFPSRYIQKYFWSPLYLGAGSGFWTKTNIDKADNSRHKKGGKMAMKGKGVLKLTKAPITKFRLNGKPRQLIENSENLYEMGKCVFNLKEREEN
>NZ_CP046246.1|WP_155224393.1|1036735_1037632_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MTLKIYKMKFQHAHFGEGILSESASSFDASRLYSALFLEAKKMDVVDEFMNLTQNANFVLSDAFPFIDDQPFLPKPIGYPKVEQDNADDNLKKVRQTAKKLKKIFYLPLNQLELFLKQQANIEELAEYQAQLAEHSYTTQKGVDPFEVGVTVYNSALYVLASQSPLFDQLMDSLQYSGVGGKRSSGLGQYSLEILSLPDELAENLTTNKQQRVMALSTCLPMNQEMLTCLDGANYLLKKSSGFAYSETAGALLRKQDLYKFKAGSTFQTSFTGDIVDVRPDNFPHPVWNFAKGIFYQL
>NZ_CP046246.1|WP_155224394.1|1037628_1038303_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MSQFTKIKIEGKIELLSGLHIGGSTAFAAIGAVDSPVIKDPVNNLPMIPGSSIKGKIRFLLAQAMNQKVAEDPNQDDSKITRLFGASMGGGEKGDQIIRGRLLFRDSLLTNKAVLDELGVRTYTETKFENTIDRRTAEASPRQIERAIRGSQFSFELIYELDNQEEAEEDFETILTGLQLLELDYLGGNGSRGYGRVRFKDITANIVYGKYDVTQFNERLKELL
>NZ_CP046246.1|WP_155224395.1|1038314_1038743_-|type-III-A-CRISPR-associated-protein-Csm2
MNHGKSRQQTVRWEQPKIHFTDRTYVSDAEAVIKELKDKRFKVGRDILTTSQIRNLLSLTSTVYDEALSSGVENVMDQVAYLRVQFVYQSGRNEAVKKLVELSRILDILKIIQKHQKKQDLIRFCRYMEALVAYFKYHGGRD
>NZ_CP046246.1|WP_155224396.1|1038751_1041040_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MDKQSVDLFYGSLLHDIGKIVQRATQEKKRHTEIGAQFMKDYLSSKNILDQIKFHHYKELSNANIEDQSQAYIAYIADNIASGLDRREHNDEVKRKWNSQMNLEDIFSKFGSKPTKRFIQPRILDLDVNNIFPSENYQEFTSGEYAGILQKIKEAFTRIEFTENYMQSTLNLLEATASFIPSSTNMQEAVDISLYDHLKMTAGFSQAIFQYLTDQSRLNFKQELFENSRSFYKEKAFLLVSFDISGIQDFIYTITSKGAHKQLRSRSFYLDMISEWIIDDLLENCSLTRANLLYSGGGHAYLFLPNTKEMLNEIEKIESGFNQFFLKNFGTQLYVIFGHTAFCANEIMEGNSPKDYQAIFHRVSNQISQKKLQRYSADEIKSLNQGGKRSGRECAICHNTSQLVEDEGQDKCELCYRLEHFSRNIQEDDFFEINDQDTQYSLPIGPNAFLHQTSRKNIENHHFSGKVYAKNQLYTGLDQATHLWVADYSDLDRNEFSHYAQREWTQQGAGASIGIKRTAVLRCDVDDLGFGFMAGFSEQDGGRYNTFSRTATFSRNMSIFFKCYINQFAEEKHLTIVYAGGDDVFIIGAWDDIIEFSVQLREYFIRWTNGKLTLSTGIGLFADKTPINIMARQTGELEDAAKDSGKDSIACFSDYFTFGYDTFIQEIYYGKLAIIRDFFAQENERGKSFIYKLLSLIRERDETDRITFARLAYYLARLEDTARNKENFRIFKQKMHDWFEDSEQIRQTELALLLYVYEIRKD
>NZ_CP046246.1|WP_083207540.1|1041032_1041779_-|CRISPR-associated-endoribonuclease-Cas6
MQQIKLNCSVEGKVENHLGTYFHGWLMQQLQPELVDELHSMKTNPFAIYVERRHDRLQFVVSLLNAEVIEIFSPILLSSKLTVITLEASRQKIFPIHNREISDLSEKDLADIFYRESARNTFDISFITPIAFKSGGDYVFFPDLRLFYQSLMRKYSYTFERDEKVDPEMLERLCESTQIVSYHIMSSYYKVHQSFIPGFKGTIRIRCRGNQTLMNFLEMLLKFGEYSGVGIKTGMGMGALQLKGESHG
>NZ_CP046246.1|WP_069028523.1|1043238_1044561_-|IS1380-family-transposase
MSFTLQQNSLTFNKQKAILIANDGGTLTNDAGLVLLSEFLNQIRFDSLLAQYVHIPEYRAFAQHEWLDVVKQWLYQLIAGYSRDRDANILQYDRLFKEALKQERLSSQFMMSTLLHTLTEENVNQLLQVAKKLGDLGMDQQNSQQLVLDLDSTCCPTYGKQEAGEYIYHYGLNGYHPFVAFEGLTGLALDVRHRHGKSYTSTHAEDYLVEMLAHYQQRSSDPTMLVRGDSGFAKPEIYKQCECRGAHYVIKLKNNVRLIHYAQHLVQYTNGTDYTKSEHQYFKMAYQADSWDRSRTVAIKATRKAETLLFSEFQFVVTDFAHLSPQTIFQLYQKRGNMENFIKEMKTGFFADKTDSPSFLANKVRLALSFIAYNIIHLMKQLTFPQEKKTTVIDTIRFQLFHIAGKVTEHARQVQIHLSSTNVYNTLFWEVLTRIQRLNL
>NZ_CP046246.1|WP_155224397.1|1045129_1046074_-|acetamidase
MAETHKCTTDTVHYTWHKEHEPILTIDSGDTVVFETREVSDNQFNFHSTTEAISELDWDYVYPLSGPVYINGAEPGDTLAVEILDLKTKHWGRTAVLPGLDLLAEDYPDAYLRTFDLSDGKYIHFSDDIKVPIEPFLGTMGVCPKDGDGTPIMPPGNFGGNLDVRQLTIGTKLYLPVQQAGALFSCGDGHAAQGDGKVCVSALECPMYASLKFTVIKASKKSIPSPQFQTKGGLTQKVNHDDFYGTTGVGPDLMTGAQEALRTMIDYVSETYNIKKIDAYLLASLCVDLKISEIVDAGQYVVSALLPLSIFNDS
>NZ_CP046246.1|WP_155224398.1|1046353_1047715_+|transposase
MSIITQTTPNSEKISTSVSDFFHQFHVASALKKSNAVHRKGFSVSVIFSFLLASIFTNGSTYRFYQKQKEQLSFSDKTFRNVLNDPHIHWQKLLILVAKSVITFLRTLTDDARKTTFIVDDSMYSRLNAKKVACAALQYDHAKKKYFKGFRYLQLGWSDGNSFVPVAFSLLSGKRKLQSDLDIGDQRTNRGKRKAQALRKGTEVTLELLRSALNQGIHADYVLFDTWFSSPKMFQQIRDLKCHCVAMVKRSQKIYYRYQGQKMDVKEIFKRNKKRRGRSRYLLSVQVEAVVEGKILPIKLVYIRNRNKRNDYLVLASTDIDLTEDEIIQLYARRWSVEVYFKMCKQYLKLAKYQGISYDGIFAHTTLVAIGYMILAVQERESKDDRTLGELFYLLIDELSELSVSEAILQLLVLFQEAFADEYVLDEAVLNNIIEQFLEKLPSSIQKQLKQAG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046246_4	4.15\|1033952\|36\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033952-1033987	36	MH972261	Staphylococcus phage Pike, complete genome	5011-5046	5	0.861
NZ_CP046246_4	4.15\|1033952\|36\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033952-1033987	36	MH972263	Staphylococcus phage JBug18, complete genome	5106-5141	5	0.861
NZ_CP046246_4	4.15\|1033952\|36\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033952-1033987	36	NC_047814	Staphylococcus phage St 134, complete genome	4925-4960	5	0.861
NZ_CP046246_4	4.15\|1033952\|36\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033952-1033987	36	MH972262	Staphylococcus phage Pontiff, complete genome	5001-5036	5	0.861
NZ_CP046246_2	2.39\|515630\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515630-515662	33	MF417908	Uncultured Caudovirales phage clone 10S_1, partial genome	7430-7462	6	0.818
NZ_CP046246_2	2.39\|515630\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515630-515662	33	MF417946	Uncultured Caudovirales phage clone 7S_10, partial genome	2371-2403	6	0.818
NZ_CP046246_2	2.104\|515632\|33\|NZ_CP046246\|PILER-CR	515632-515664	33	MF417908	Uncultured Caudovirales phage clone 10S_1, partial genome	7430-7462	6	0.818
NZ_CP046246_2	2.104\|515632\|33\|NZ_CP046246\|PILER-CR	515632-515664	33	MF417946	Uncultured Caudovirales phage clone 7S_10, partial genome	2371-2403	6	0.818
NZ_CP046246_2	2.17\|514285\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514285-514317	33	KY984068	Erwinia phage vB_EamM_Y3, complete genome	96807-96839	7	0.788
NZ_CP046246_2	2.17\|514285\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514285-514317	33	MH319720	Marine virus AG-345-D19 Ga0172267_101 genomic sequence	29904-29936	7	0.788
NZ_CP046246_2	2.46\|516058\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	516058-516090	33	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	27154-27186	7	0.788
NZ_CP046246_2	2.46\|516058\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	516058-516090	33	NC_014534	Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence	30651-30683	7	0.788
NZ_CP046246_2	2.82\|514287\|33\|NZ_CP046246\|PILER-CR	514287-514319	33	KY984068	Erwinia phage vB_EamM_Y3, complete genome	96807-96839	7	0.788
NZ_CP046246_2	2.82\|514287\|33\|NZ_CP046246\|PILER-CR	514287-514319	33	MH319720	Marine virus AG-345-D19 Ga0172267_101 genomic sequence	29904-29936	7	0.788
NZ_CP046246_2	2.111\|516060\|33\|NZ_CP046246\|PILER-CR	516060-516092	33	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	27154-27186	7	0.788
NZ_CP046246_2	2.111\|516060\|33\|NZ_CP046246\|PILER-CR	516060-516092	33	NC_014534	Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence	30651-30683	7	0.788
NZ_CP046246_4	4.15\|1033952\|36\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033952-1033987	36	NC_047813	Staphylococcus phage Andhra, complete genome	5101-5136	7	0.806
NZ_CP046246_2	2.24\|514712\|34\|NZ_CP046246\|CRISPRCasFinder,CRT	514712-514745	34	MN694366	Marine virus AFVG_250M1050, complete genome	17670-17703	8	0.765
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP045822	Bacillus subtilis strain MB8_B7 plasmid pBs001, complete sequence	17623-17655	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP045813	Bacillus subtilis strain P8_B3 plasmid pBs005, complete sequence	8897-8929	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP041758	Bacillus sp. KBS0812 plasmid unnamed, complete sequence	41175-41207	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP030938	Bacillus sp. DM2 plasmid unnamed, complete sequence	63923-63955	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NC_021809	Bacillus subtilis subsp. subtilis str. NCIB 3610 plasmid pBS32, complete sequence	11974-12006	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP020103	Bacillus subtilis strain NCIB 3610 plasmid pBS32, complete sequence	3385-3417	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_AP019715	Bacillus subtilis subsp. subtilis strain NBRC 13719 plasmid pBSU1, complete sequence	67235-67267	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP034485	Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 strain NCIB 3610 plasmid unnamed, complete sequence	51756-51788	8	0.758
NZ_CP046246_2	2.29\|515019\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515019-515051	33	NZ_CP045923	Bacillus subtilis strain P8_B1 plasmid pBs003, complete sequence	8996-9028	8	0.758
NZ_CP046246_2	2.46\|516058\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	516058-516090	33	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	251496-251528	8	0.758
NZ_CP046246_2	2.61\|516981\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516981-517013	33	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	57850-57882	8	0.758
NZ_CP046246_2	2.61\|516981\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516981-517013	33	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	57850-57882	8	0.758
NZ_CP046246_2	2.61\|516981\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516981-517013	33	MK250029	Prevotella phage Lak-C1, complete genome	438207-438239	8	0.758
NZ_CP046246_2	2.61\|516981\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516981-517013	33	MK250016	Prevotella phage Lak-A1, complete genome	474389-474421	8	0.758
NZ_CP046246_2	2.61\|516981\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516981-517013	33	MK250019	Prevotella phage Lak-A2, complete genome	392831-392863	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	NC_007291	Enterobacteria phage JK06, complete genome	43334-43366	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	DQ121662	Escherichia virus Jk06, complete genome	43334-43366	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	NC_042038	Enterobacteriophage phiKP26, complete genome	28769-28801	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	LR588166	Pseudomonas phage vB_PaeM_MIJ3	92821-92853	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	209356-209388	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	KF771237	Escherichia phage bV_EcoS_AHP42, complete genome	25434-25466	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	NC_024789	Escherichia phage bV_EcoS_AKS96, complete genome	24879-24911	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	KT825490	Escherichia phage C119, complete genome	21040-21072	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	NC_019718	Enterobacteria phage vB_EcoS_Rogue1, complete genome	29235-29267	8	0.758
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	NC_047740	Enterobacteria phage phiJLA23, complete genome	40045-40077	8	0.758
NZ_CP046246_2	2.89\|514714\|34\|NZ_CP046246\|PILER-CR	514714-514747	34	MN694366	Marine virus AFVG_250M1050, complete genome	17670-17703	8	0.765
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP045822	Bacillus subtilis strain MB8_B7 plasmid pBs001, complete sequence	17623-17655	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP045813	Bacillus subtilis strain P8_B3 plasmid pBs005, complete sequence	8897-8929	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP041758	Bacillus sp. KBS0812 plasmid unnamed, complete sequence	41175-41207	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP030938	Bacillus sp. DM2 plasmid unnamed, complete sequence	63923-63955	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NC_021809	Bacillus subtilis subsp. subtilis str. NCIB 3610 plasmid pBS32, complete sequence	11974-12006	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP020103	Bacillus subtilis strain NCIB 3610 plasmid pBS32, complete sequence	3385-3417	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_AP019715	Bacillus subtilis subsp. subtilis strain NBRC 13719 plasmid pBSU1, complete sequence	67235-67267	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP034485	Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 strain NCIB 3610 plasmid unnamed, complete sequence	51756-51788	8	0.758
NZ_CP046246_2	2.94\|515021\|33\|NZ_CP046246\|PILER-CR	515021-515053	33	NZ_CP045923	Bacillus subtilis strain P8_B1 plasmid pBs003, complete sequence	8996-9028	8	0.758
NZ_CP046246_2	2.111\|516060\|33\|NZ_CP046246\|PILER-CR	516060-516092	33	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	251496-251528	8	0.758
NZ_CP046246_2	2.17\|514285\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514285-514317	33	NC_050152	Enterobacteria phage P7, complete genome	57086-57118	9	0.727
NZ_CP046246_2	2.18\|514346\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514346-514378	33	FM164764	Stygiolobus rod-shaped virus, complete genome	25449-25481	9	0.727
NZ_CP046246_2	2.40\|515691\|34\|NZ_CP046246\|CRISPRCasFinder,CRT	515691-515724	34	MN855940	Myoviridae sp. isolate 64, complete genome	1476-1509	9	0.735
NZ_CP046246_2	2.40\|515691\|34\|NZ_CP046246\|CRISPRCasFinder,CRT	515691-515724	34	NC_016040	Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence	51264-51297	9	0.735
NZ_CP046246_2	2.40\|515691\|34\|NZ_CP046246\|CRISPRCasFinder,CRT	515691-515724	34	MN693465	Marine virus AFVG_25M405, complete genome	1885-1918	9	0.735
NZ_CP046246_2	2.44\|515936\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	515936-515968	33	KX156762	Staphylococcus phage vB_SauS_IMEP5, complete genome	25930-25962	9	0.727
NZ_CP046246_2	2.46\|516058\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	516058-516090	33	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	287310-287342	9	0.727
NZ_CP046246_2	2.50\|516302\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516302-516334	33	NZ_CP031836	Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence	35662-35694	9	0.727
NZ_CP046246_2	2.55\|516608\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	516608-516640	33	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	248579-248611	9	0.727
NZ_CP046246_2	2.62\|517042\|33\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	517042-517074	33	MK552105	Escherichia phage Jahat_MG145, complete genome	19103-19135	9	0.727
NZ_CP046246_2	2.82\|514287\|33\|NZ_CP046246\|PILER-CR	514287-514319	33	NC_050152	Enterobacteria phage P7, complete genome	57086-57118	9	0.727
NZ_CP046246_2	2.83\|514348\|33\|NZ_CP046246\|PILER-CR	514348-514380	33	FM164764	Stygiolobus rod-shaped virus, complete genome	25449-25481	9	0.727
NZ_CP046246_2	2.105\|515693\|34\|NZ_CP046246\|PILER-CR	515693-515726	34	MN855940	Myoviridae sp. isolate 64, complete genome	1476-1509	9	0.735
NZ_CP046246_2	2.105\|515693\|34\|NZ_CP046246\|PILER-CR	515693-515726	34	NC_016040	Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence	51264-51297	9	0.735
NZ_CP046246_2	2.105\|515693\|34\|NZ_CP046246\|PILER-CR	515693-515726	34	MN693465	Marine virus AFVG_25M405, complete genome	1885-1918	9	0.735
NZ_CP046246_2	2.109\|515938\|33\|NZ_CP046246\|PILER-CR	515938-515970	33	KX156762	Staphylococcus phage vB_SauS_IMEP5, complete genome	25930-25962	9	0.727
NZ_CP046246_2	2.111\|516060\|33\|NZ_CP046246\|PILER-CR	516060-516092	33	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	287310-287342	9	0.727
NZ_CP046246_3	3.1\|745242\|33\|NZ_CP046246\|CRISPRCasFinder	745242-745274	33	NZ_CP010111	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence	235632-235664	9	0.727
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	302101-302135	9	0.743
NZ_CP046246_2	2.14\|514102\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514102-514134	33	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	807534-807566	10	0.697
NZ_CP046246_2	2.24\|514712\|34\|NZ_CP046246\|CRISPRCasFinder,CRT	514712-514745	34	KU234533	Nostoc phage A1, complete genome	3191-3224	10	0.706
NZ_CP046246_2	2.46\|516058\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	516058-516090	33	NZ_CP018777	Staphylococcus condimenti strain StO 2014-01 plasmid pStO2014-01, complete sequence	18537-18569	10	0.697
NZ_CP046246_2	2.79\|514104\|33\|NZ_CP046246\|PILER-CR	514104-514136	33	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	807534-807566	10	0.697
NZ_CP046246_2	2.89\|514714\|34\|NZ_CP046246\|PILER-CR	514714-514747	34	KU234533	Nostoc phage A1, complete genome	3191-3224	10	0.706
NZ_CP046246_2	2.111\|516060\|33\|NZ_CP046246\|PILER-CR	516060-516092	33	NZ_CP018777	Staphylococcus condimenti strain StO 2014-01 plasmid pStO2014-01, complete sequence	18537-18569	10	0.697
NZ_CP046246_4	4.14\|1033881\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033881-1033915	35	NZ_CP026237	Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence	210109-210143	10	0.714
NZ_CP046246_4	4.14\|1033881\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033881-1033915	35	NZ_CP022155	Escherichia coli strain ABWA45 plasmid pABWA45_1, complete sequence	63880-63914	10	0.714
NZ_CP046246_4	4.14\|1033881\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033881-1033915	35	NZ_CP028549	Klebsiella variicola strain WCHKP19 plasmid p1_020019, complete sequence	77747-77781	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	275819-275853	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	219150-219184	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	54638-54672	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	345151-345185	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	392739-392773	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP004860	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence	286874-286908	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	409915-409949	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	448795-448829	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP010090	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence	271769-271803	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP007616	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence	91546-91580	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	362125-362159	10	0.714
NZ_CP046246_4	4.19\|1034239\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1034239-1034273	35	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	187321-187355	10	0.714
NZ_CP046246_2	2.17\|514285\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514285-514317	33	JQ011318	Escherichia phage TL-2011c, complete genome	50113-50145	11	0.667
NZ_CP046246_2	2.17\|514285\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514285-514317	33	KJ603229	Shigella phage POCJ13, complete genome	47999-48031	11	0.667
NZ_CP046246_2	2.25\|514774\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	514774-514806	33	NC_010479	Synechococcus sp. PCC 7002 plasmid pAQ5, complete sequence	33570-33602	11	0.667
NZ_CP046246_2	2.46\|516058\|33\|NZ_CP046246\|CRISPRCasFinder,CRT	516058-516090	33	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	103532-103564	11	0.667
NZ_CP046246_2	2.82\|514287\|33\|NZ_CP046246\|PILER-CR	514287-514319	33	JQ011318	Escherichia phage TL-2011c, complete genome	50113-50145	11	0.667
NZ_CP046246_2	2.82\|514287\|33\|NZ_CP046246\|PILER-CR	514287-514319	33	KJ603229	Shigella phage POCJ13, complete genome	47999-48031	11	0.667
NZ_CP046246_2	2.90\|514776\|33\|NZ_CP046246\|PILER-CR	514776-514808	33	NC_010479	Synechococcus sp. PCC 7002 plasmid pAQ5, complete sequence	33570-33602	11	0.667
NZ_CP046246_2	2.111\|516060\|33\|NZ_CP046246\|PILER-CR	516060-516092	33	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	103532-103564	11	0.667
NZ_CP046246_4	4.5\|1033237\|35\|NZ_CP046246\|CRISPRCasFinder,CRT,PILER-CR	1033237-1033271	35	NZ_CP031076	Bacillus mycoides strain BPN401 plasmid pl36, complete sequence	7189-7223	11	0.686

1. spacer 4.15|1033952|36|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MH972261 (Staphylococcus phage Pike, complete genome) position: , mismatch: 5, identity: 0.861

aagagaaaaaccaactgaatataaaaatatggtgta	CRISPR spacer
aagagaaaaaccaactaaatataaaaatgtgactta	Protospacer
****************.***********.**.. **

2. spacer 4.15|1033952|36|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MH972263 (Staphylococcus phage JBug18, complete genome) position: , mismatch: 5, identity: 0.861

aagagaaaaaccaactgaatataaaaatatggtgta	CRISPR spacer
aagagaaaaaccaactaaatataaaaatgtgactta	Protospacer
****************.***********.**.. **

3. spacer 4.15|1033952|36|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_047814 (Staphylococcus phage St 134, complete genome) position: , mismatch: 5, identity: 0.861

aagagaaaaaccaactgaatataaaaatatggtgta	CRISPR spacer
aagagaaaaaccaactaaatataaaaatgtgactta	Protospacer
****************.***********.**.. **

4. spacer 4.15|1033952|36|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MH972262 (Staphylococcus phage Pontiff, complete genome) position: , mismatch: 5, identity: 0.861

aagagaaaaaccaactgaatataaaaatatggtgta	CRISPR spacer
aagagaaaaaccaactaaatataaaaatgtgactta	Protospacer
****************.***********.**.. **

5. spacer 2.39|515630|33|NZ_CP046246|CRISPRCasFinder,CRT matches to MF417908 (Uncultured Caudovirales phage clone 10S_1, partial genome) position: , mismatch: 6, identity: 0.818

aagtgcagttacagatccggaacgtattaaata	CRISPR spacer
acaacaagttacagatccagaacgtattaaata	Protospacer
* .   ************.**************

6. spacer 2.39|515630|33|NZ_CP046246|CRISPRCasFinder,CRT matches to MF417946 (Uncultured Caudovirales phage clone 7S_10, partial genome) position: , mismatch: 6, identity: 0.818

aagtgcagttacagatccggaacgtattaaata	CRISPR spacer
acaacaagttacagatccagaacgtattaaata	Protospacer
* .   ************.**************

7. spacer 2.104|515632|33|NZ_CP046246|PILER-CR matches to MF417908 (Uncultured Caudovirales phage clone 10S_1, partial genome) position: , mismatch: 6, identity: 0.818

aagtgcagttacagatccggaacgtattaaata	CRISPR spacer
acaacaagttacagatccagaacgtattaaata	Protospacer
* .   ************.**************

8. spacer 2.104|515632|33|NZ_CP046246|PILER-CR matches to MF417946 (Uncultured Caudovirales phage clone 7S_10, partial genome) position: , mismatch: 6, identity: 0.818

aagtgcagttacagatccggaacgtattaaata	CRISPR spacer
acaacaagttacagatccagaacgtattaaata	Protospacer
* .   ************.**************

9. spacer 2.17|514285|33|NZ_CP046246|CRISPRCasFinder,CRT matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.788

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
aagagcagcaccagcaacagcaccgatagcgag	Protospacer
...*** ***************** ****  **

10. spacer 2.17|514285|33|NZ_CP046246|CRISPRCasFinder,CRT matches to MH319720 (Marine virus AG-345-D19 Ga0172267_101 genomic sequence) position: , mismatch: 7, identity: 0.788

ggaagctgcaccagcaacagcacctatagatag-	CRISPR spacer
caaacctgcaccagcaccagcaccta-atatacc	Protospacer
 .** *********** ********* * ***

11. spacer 2.46|516058|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.788

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
gagttaaatttattataaaaagaatccacatta	Protospacer
* .************** ******* ** *  *

12. spacer 2.46|516058|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 7, identity: 0.788

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
gcatttaatttattatatacagaagtgaccgaa	Protospacer
***** ************* ****   *  ***

13. spacer 2.82|514287|33|NZ_CP046246|PILER-CR matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.788

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
aagagcagcaccagcaacagcaccgatagcgag	Protospacer
...*** ***************** ****  **

14. spacer 2.82|514287|33|NZ_CP046246|PILER-CR matches to MH319720 (Marine virus AG-345-D19 Ga0172267_101 genomic sequence) position: , mismatch: 7, identity: 0.788

ggaagctgcaccagcaacagcacctatagatag-	CRISPR spacer
caaacctgcaccagcaccagcaccta-atatacc	Protospacer
 .** *********** ********* * ***

15. spacer 2.111|516060|33|NZ_CP046246|PILER-CR matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.788

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
gagttaaatttattataaaaagaatccacatta	Protospacer
* .************** ******* ** *  *

16. spacer 2.111|516060|33|NZ_CP046246|PILER-CR matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 7, identity: 0.788

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
gcatttaatttattatatacagaagtgaccgaa	Protospacer
***** ************* ****   *  ***

17. spacer 4.15|1033952|36|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_047813 (Staphylococcus phage Andhra, complete genome) position: , mismatch: 7, identity: 0.806

aagagaaaaaccaactgaatataaaaatatggtgta	CRISPR spacer
aagagaaaaaccaacaaaatataaaaatgttactta	Protospacer
*************** .***********.* .. **

18. spacer 2.24|514712|34|NZ_CP046246|CRISPRCasFinder,CRT matches to MN694366 (Marine virus AFVG_250M1050, complete genome) position: , mismatch: 8, identity: 0.765

tcacactattgatttgatcatctgttaaacctaa	CRISPR spacer
taattgctttgatttcatcatctgttaatcctaa	Protospacer
* *.  . ******* ************ *****

19. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP045822 (Bacillus subtilis strain MB8_B7 plasmid pBs001, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

20. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP045813 (Bacillus subtilis strain P8_B3 plasmid pBs005, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

21. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP041758 (Bacillus sp. KBS0812 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

22. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP030938 (Bacillus sp. DM2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

23. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NC_021809 (Bacillus subtilis subsp. subtilis str. NCIB 3610 plasmid pBS32, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

24. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP020103 (Bacillus subtilis strain NCIB 3610 plasmid pBS32, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

25. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_AP019715 (Bacillus subtilis subsp. subtilis strain NBRC 13719 plasmid pBSU1, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

26. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP034485 (Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 strain NCIB 3610 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

27. spacer 2.29|515019|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP045923 (Bacillus subtilis strain P8_B1 plasmid pBs003, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

28. spacer 2.46|516058|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.758

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
gctagtaatttattttataaaaaatacaaacta	Protospacer
**    ******** ******.********  *

29. spacer 2.61|516981|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 8, identity: 0.758

ttaaaatctttaatttgtaaatccacattaccg	CRISPR spacer
atcaaatcttaaatttgtaaaaccacataaaaa	Protospacer
 * ******* ********** ****** *  .

30. spacer 2.61|516981|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 8, identity: 0.758

ttaaaatctttaatttgtaaatccacattaccg	CRISPR spacer
atcaaatcttaaatttgtaaaaccacataaaaa	Protospacer
 * ******* ********** ****** *  .

31. spacer 2.61|516981|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 8, identity: 0.758

ttaaaatctttaatttgtaaatcca----cattaccg	CRISPR spacer
ataaaatctttaattcctaaatccaaccctatt----	Protospacer
 **************. ********    .***

32. spacer 2.61|516981|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.758

ttaaaatctttaatttgtaaatcca----cattaccg	CRISPR spacer
ataaaatctttaattcctaaatccaaccctatt----	Protospacer
 **************. ********    .***

33. spacer 2.61|516981|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 8, identity: 0.758

ttaaaatctttaatttgtaaatcca----cattaccg	CRISPR spacer
ataaaatctttaattcctaaatccaaccctatt----	Protospacer
 **************. ********    .***

34. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_007291 (Enterobacteria phage JK06, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

35. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to DQ121662 (Escherichia virus Jk06, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

36. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_042038 (Enterobacteriophage phiKP26, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

37. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-	CRISPR spacer
ctctaagtgttggatctgaatttactag-agtat	Protospacer
. * ****** ******* *********  .**

38. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-	CRISPR spacer
cactaagtgttggatctgaatttactag-agtat	Protospacer
..* ****** ******* *********  .**

39. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to KF771237 (Escherichia phage bV_EcoS_AHP42, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

40. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_024789 (Escherichia phage bV_EcoS_AKS96, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

41. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to KT825490 (Escherichia phage C119, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

42. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_019718 (Enterobacteria phage vB_EcoS_Rogue1, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

43. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_047740 (Enterobacteria phage phiJLA23, complete genome) position: , mismatch: 8, identity: 0.758

tgcaaagtgtaggatctgcatttactagtcata-----	CRISPR spacer
cgcaaggagtaggatctgcattta-----catacgctc	Protospacer
.****.* ****************     ****

44. spacer 2.89|514714|34|NZ_CP046246|PILER-CR matches to MN694366 (Marine virus AFVG_250M1050, complete genome) position: , mismatch: 8, identity: 0.765

tcacactattgatttgatcatctgttaaacctaa	CRISPR spacer
taattgctttgatttcatcatctgttaatcctaa	Protospacer
* *.  . ******* ************ *****

45. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP045822 (Bacillus subtilis strain MB8_B7 plasmid pBs001, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

46. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP045813 (Bacillus subtilis strain P8_B3 plasmid pBs005, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

47. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP041758 (Bacillus sp. KBS0812 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

48. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP030938 (Bacillus sp. DM2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

49. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NC_021809 (Bacillus subtilis subsp. subtilis str. NCIB 3610 plasmid pBS32, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

50. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP020103 (Bacillus subtilis strain NCIB 3610 plasmid pBS32, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

51. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_AP019715 (Bacillus subtilis subsp. subtilis strain NBRC 13719 plasmid pBSU1, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

52. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP034485 (Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 strain NCIB 3610 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

53. spacer 2.94|515021|33|NZ_CP046246|PILER-CR matches to NZ_CP045923 (Bacillus subtilis strain P8_B1 plasmid pBs003, complete sequence) position: , mismatch: 8, identity: 0.758

cagacgttgcagctggtgcaatggctgcaggcg	CRISPR spacer
aacgtgtagcagctggcgcaatggctgcagcag	Protospacer
 * ..** ********.*************  *

54. spacer 2.111|516060|33|NZ_CP046246|PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.758

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
gctagtaatttattttataaaaaatacaaacta	Protospacer
**    ******** ******.********  *

55. spacer 2.17|514285|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 9, identity: 0.727

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
actaaatgcaccagcaacagaacccatagacat	Protospacer
.  *. ************** ***.*****.*

56. spacer 2.18|514346|33|NZ_CP046246|CRISPRCasFinder,CRT matches to FM164764 (Stygiolobus rod-shaped virus, complete genome) position: , mismatch: 9, identity: 0.727

acgggtcttaaagatgagcaattaacgaattta	CRISPR spacer
ttacttatttaagaggagcaattaacgaatttt	Protospacer
 ..  * ** **** *****************

57. spacer 2.40|515691|34|NZ_CP046246|CRISPRCasFinder,CRT matches to MN855940 (Myoviridae sp. isolate 64, complete genome) position: , mismatch: 9, identity: 0.735

tgtggccaaggaaaagatggataactttaaaaag	CRISPR spacer
ttggaataaggtaaagatggataactttaaagca	Protospacer
*  *. .**** *******************. .

58. spacer 2.40|515691|34|NZ_CP046246|CRISPRCasFinder,CRT matches to NC_016040 (Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence) position: , mismatch: 9, identity: 0.735

tgtggccaaggaaaagatggataactttaaaaag	CRISPR spacer
gggggccaaggaaaatatggataagttgactcgg	Protospacer
 * ************ ******** ** *   .*

59. spacer 2.40|515691|34|NZ_CP046246|CRISPRCasFinder,CRT matches to MN693465 (Marine virus AFVG_25M405, complete genome) position: , mismatch: 9, identity: 0.735

tgtggccaaggaaaagatggataactttaaaaag	CRISPR spacer
tatatccaaagaaaggatggataactttagttaa	Protospacer
*.*. ****.****.**************.  *.

60. spacer 2.44|515936|33|NZ_CP046246|CRISPRCasFinder,CRT matches to KX156762 (Staphylococcus phage vB_SauS_IMEP5, complete genome) position: , mismatch: 9, identity: 0.727

ctatctgtattatatttataacgtatcggctcg	CRISPR spacer
tcatctgtattgtatttataacgaataacttca	Protospacer
..*********.*********** ** . .**.

61. spacer 2.46|516058|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.727

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
tttaaaaattgattatataaagaatataaacga	Protospacer
 .   ***** ***************.*** .*

62. spacer 2.50|516302|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.727

ttaatatgttgtaatagagcgtcttcggcttta	CRISPR spacer
tggaattgttgtaatagagcttcttcagctcat	Protospacer
* .*  ************** *****.***.

63. spacer 2.55|516608|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 9, identity: 0.727

ctgaaatcaaagctgcagtccataatgcacttg	CRISPR spacer
ttgaaaacaaagctgccgtccataagttcctaa	Protospacer
.***** ********* ********  . ** .

64. spacer 2.62|517042|33|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to MK552105 (Escherichia phage Jahat_MG145, complete genome) position: , mismatch: 9, identity: 0.727

tgcaaagtgtaggatctgcatttactagtcata	CRISPR spacer
cgcaaggtgtaggatctgcttttacatacggta	Protospacer
.****.************* *****  .. .**

65. spacer 2.82|514287|33|NZ_CP046246|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 9, identity: 0.727

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
actaaatgcaccagcaacagaacccatagacat	Protospacer
.  *. ************** ***.*****.*

66. spacer 2.83|514348|33|NZ_CP046246|PILER-CR matches to FM164764 (Stygiolobus rod-shaped virus, complete genome) position: , mismatch: 9, identity: 0.727

acgggtcttaaagatgagcaattaacgaattta	CRISPR spacer
ttacttatttaagaggagcaattaacgaatttt	Protospacer
 ..  * ** **** *****************

67. spacer 2.105|515693|34|NZ_CP046246|PILER-CR matches to MN855940 (Myoviridae sp. isolate 64, complete genome) position: , mismatch: 9, identity: 0.735

tgtggccaaggaaaagatggataactttaaaaag	CRISPR spacer
ttggaataaggtaaagatggataactttaaagca	Protospacer
*  *. .**** *******************. .

68. spacer 2.105|515693|34|NZ_CP046246|PILER-CR matches to NC_016040 (Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence) position: , mismatch: 9, identity: 0.735

tgtggccaaggaaaagatggataactttaaaaag	CRISPR spacer
gggggccaaggaaaatatggataagttgactcgg	Protospacer
 * ************ ******** ** *   .*

69. spacer 2.105|515693|34|NZ_CP046246|PILER-CR matches to MN693465 (Marine virus AFVG_25M405, complete genome) position: , mismatch: 9, identity: 0.735

tgtggccaaggaaaagatggataactttaaaaag	CRISPR spacer
tatatccaaagaaaggatggataactttagttaa	Protospacer
*.*. ****.****.**************.  *.

70. spacer 2.109|515938|33|NZ_CP046246|PILER-CR matches to KX156762 (Staphylococcus phage vB_SauS_IMEP5, complete genome) position: , mismatch: 9, identity: 0.727

ctatctgtattatatttataacgtatcggctcg	CRISPR spacer
tcatctgtattgtatttataacgaataacttca	Protospacer
..*********.*********** ** . .**.

71. spacer 2.111|516060|33|NZ_CP046246|PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.727

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
tttaaaaattgattatataaagaatataaacga	Protospacer
 .   ***** ***************.*** .*

72. spacer 3.1|745242|33|NZ_CP046246|CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 9, identity: 0.727

taaaaatggagaattagttaaagaagagaaaga	CRISPR spacer
caaaaatgaagaattggttaaagaacgaagact	Protospacer
.*******.******.********* ..*.*

73. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
ccacaaaaaatatattgatggaaaaataaatttga	Protospacer
 *********** ***.*********   * .**.

74. spacer 2.14|514102|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 10, identity: 0.697

gaggttgaaagaactaagaaaatcaaaaccgca	CRISPR spacer
atttttaaaagaactaagaaaataaaaaaacta	Protospacer
.   **.**************** ****   .*

75. spacer 2.24|514712|34|NZ_CP046246|CRISPRCasFinder,CRT matches to KU234533 (Nostoc phage A1, complete genome) position: , mismatch: 10, identity: 0.706

tcacactattgatttgatcatctgttaaacctaa	CRISPR spacer
gttgatcattggattgatcatctgttaaaccttc	Protospacer
 .  *..****. *******************

76. spacer 2.46|516058|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP018777 (Staphylococcus condimenti strain StO 2014-01 plasmid pStO2014-01, complete sequence) position: , mismatch: 10, identity: 0.697

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
ttcttaaatttattataacaagaatacgcattt	Protospacer
 . **************  ********. *

77. spacer 2.79|514104|33|NZ_CP046246|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 10, identity: 0.697

gaggttgaaagaactaagaaaatcaaaaccgca	CRISPR spacer
atttttaaaagaactaagaaaataaaaaaacta	Protospacer
.   **.**************** ****   .*

78. spacer 2.89|514714|34|NZ_CP046246|PILER-CR matches to KU234533 (Nostoc phage A1, complete genome) position: , mismatch: 10, identity: 0.706

tcacactattgatttgatcatctgttaaacctaa	CRISPR spacer
gttgatcattggattgatcatctgttaaaccttc	Protospacer
 .  *..****. *******************

79. spacer 2.111|516060|33|NZ_CP046246|PILER-CR matches to NZ_CP018777 (Staphylococcus condimenti strain StO 2014-01 plasmid pStO2014-01, complete sequence) position: , mismatch: 10, identity: 0.697

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
ttcttaaatttattataacaagaatacgcattt	Protospacer
 . **************  ********. *

80. spacer 4.14|1033881|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026237 (Citrobacter freundii complex sp. CFNIH3 plasmid pCFR-9161, complete sequence) position: , mismatch: 10, identity: 0.714

tttgcttttcaaccactggcagtaaatggacttgt	CRISPR spacer
tcgtctttgcaaccactggcagaaaatggatagcc	Protospacer
*.  **** ************* *******.   .

81. spacer 4.14|1033881|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022155 (Escherichia coli strain ABWA45 plasmid pABWA45_1, complete sequence) position: , mismatch: 10, identity: 0.714

tttgcttttcaaccactggcagtaaatggacttgt	CRISPR spacer
tcgtctttgcaaccactggcagaaaatggatagcc	Protospacer
*.  **** ************* *******.   .

82. spacer 4.14|1033881|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028549 (Klebsiella variicola strain WCHKP19 plasmid p1_020019, complete sequence) position: , mismatch: 10, identity: 0.714

tttgcttttcaaccactggcagtaaatggacttgt	CRISPR spacer
tcgtctttgcaaccactggcagaaaatggatagcc	Protospacer
*.  **** ************* *******.   .

83. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

84. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

85. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

86. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

87. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

88. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

89. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

90. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

91. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010090 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
ccacaaaaaatatattgatggaaaaataaattcga	Protospacer
 *********** ***.*********   * ..*.

92. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

93. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
ccacaaaaaatatattgatggaaaaataaattcga	Protospacer
 *********** ***.*********   * ..*.

94. spacer 4.19|1034239|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 10, identity: 0.714

acacaaaaaataaattaatggaaaaagtcaactgg	CRISPR spacer
tcacaaaaaatatattgatggaaaaataaattcag	Protospacer
 *********** ***.*********   * ...*

95. spacer 2.17|514285|33|NZ_CP046246|CRISPRCasFinder,CRT matches to JQ011318 (Escherichia phage TL-2011c, complete genome) position: , mismatch: 11, identity: 0.667

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
aattactgcaccagcaacagcaccaacaggacc	Protospacer
..  .******************* *.**.

96. spacer 2.17|514285|33|NZ_CP046246|CRISPRCasFinder,CRT matches to KJ603229 (Shigella phage POCJ13, complete genome) position: , mismatch: 11, identity: 0.667

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
aattactgcaccagcaacagcaccaacaggacc	Protospacer
..  .******************* *.**.

97. spacer 2.25|514774|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NC_010479 (Synechococcus sp. PCC 7002 plasmid pAQ5, complete sequence) position: , mismatch: 11, identity: 0.667

tcatccagttggggctgaatttcctcttgaata	CRISPR spacer
atgatggcatggggatgaatttcctcttggata	Protospacer
 .. . .  ***** **************.***

98. spacer 2.46|516058|33|NZ_CP046246|CRISPRCasFinder,CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 11, identity: 0.667

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
acattaaatttattatattaaggatgtgtgctt	Protospacer
.***************** ***.**... .

99. spacer 2.82|514287|33|NZ_CP046246|PILER-CR matches to JQ011318 (Escherichia phage TL-2011c, complete genome) position: , mismatch: 11, identity: 0.667

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
aattactgcaccagcaacagcaccaacaggacc	Protospacer
..  .******************* *.**.

100. spacer 2.82|514287|33|NZ_CP046246|PILER-CR matches to KJ603229 (Shigella phage POCJ13, complete genome) position: , mismatch: 11, identity: 0.667

ggaagctgcaccagcaacagcacctatagatag	CRISPR spacer
aattactgcaccagcaacagcaccaacaggacc	Protospacer
..  .******************* *.**.

101. spacer 2.90|514776|33|NZ_CP046246|PILER-CR matches to NC_010479 (Synechococcus sp. PCC 7002 plasmid pAQ5, complete sequence) position: , mismatch: 11, identity: 0.667

tcatccagttggggctgaatttcctcttgaata	CRISPR spacer
atgatggcatggggatgaatttcctcttggata	Protospacer
 .. . .  ***** **************.***

102. spacer 2.111|516060|33|NZ_CP046246|PILER-CR matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 11, identity: 0.667

gcattaaatttattatataaagaatacaaagaa	CRISPR spacer
acattaaatttattatattaaggatgtgtgctt	Protospacer
.***************** ***.**... .

103. spacer 4.5|1033237|35|NZ_CP046246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031076 (Bacillus mycoides strain BPN401 plasmid pl36, complete sequence) position: , mismatch: 11, identity: 0.686

gaactaaataatgaatagcataaaagaaacactaa	CRISPR spacer
cgatctctgaataaatagcataaaacaaacactac	Protospacer
 .*..    ***.************ ********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

368313 : 436089

Staphylococcus_phage(23.53%)

integrase,protease,transposase

attL 383594:383611|attR 418087:418104

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155224207.1\|368313_369420_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_094243521.1\|369571_370177_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_094243520.1\|370166_371309_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_155224208.1\|373769_374696_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_014124933.1\|374909_375677_-	pyruvate formate lyase-activating protein	NA	NA	NA	NA
WP_155224209.1\|375832_378115_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	6.7e-167	41.4
WP_155224210.1\|378450_380898_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	3.2e-98	33.4
WP_155224211.1\|380933_382931_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	8.0e-116	41.3
WP_014124937.1\|383143_383572_-	CoA-binding protein	NA	NA	NA	NA
383594:383611	attL	NA	NA	NA	NA
WP_094243515.1\|383689_384325_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_155224212.1\|384367_385243_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_103097176.1\|385269_386055_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_155224213.1\|386096_387503_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	1.3e-40	28.5
WP_014124942.1\|387507_388053_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_155224214.1\|388084_388981_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	3.4e-34	29.1
WP_014124944.1\|389183_391262_-	type I DNA topoisomerase	A0A2K9L1Q2	Tupanvirus	8.9e-102	38.5
WP_155224215.1\|391395_392274_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_155224216.1\|392333_393101_-	ribonuclease HII	R4THQ2	Phaeocystis_globosa_virus	1.2e-19	37.6
WP_155224217.1\|393101_393950_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_061840532.1\|394045_395569_-\|integrase	site-specific integrase	Q4ZE80	Staphylococcus_phage	2.2e-25	25.1
WP_002335628.1\|395671_395902_-	hypothetical protein	A0A1X9IGE0	Lactococcus_phage	1.2e-10	43.2
WP_002335627.1\|396291_396534_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002335626.1\|396520_396949_-	hypothetical protein	NA	NA	NA	NA
WP_014124953.1\|399592_400630_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_014124954.1\|400655_401594_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_061840530.1\|402088_402634_-	signal peptidase I	NA	NA	NA	NA
WP_155224218.1\|402659_404072_-	PDZ domain-containing protein	A0A0R6PIZ1	Moraxella_phage	7.3e-23	29.0
WP_014124957.1\|404099_404321_-	YozE family protein	NA	NA	NA	NA
WP_014124958.1\|404317_404833_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_094244167.1\|404843_405491_-	YpmS family protein	NA	NA	NA	NA
WP_155224219.1\|405484_406375_-	lipase	NA	NA	NA	NA
WP_061840526.1\|406604_407453_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	8.6e-19	38.3
WP_103100151.1\|407572_408640_-	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_155224220.1\|408870_409524_+	hemolysin III family protein	NA	NA	NA	NA
WP_061840523.1\|409605_410055_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_061840521.1\|410336_410825_-	dihydrofolate reductase	A0A1L7N103	Ralstonia_phage	1.2e-20	34.0
WP_014124966.1\|410841_411789_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.1e-119	63.4
WP_155224221.1\|411808_413689_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.9e-51	30.5
WP_155224222.1\|413899_416035_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_061840511.1\|416338_417628_-	LytR family transcriptional regulator	NA	NA	NA	NA
WP_061840509.1\|417741_418551_-	ABC transporter permease	NA	NA	NA	NA
418087:418104	attR	NA	NA	NA	NA
WP_103097188.1\|418578_419637_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.2e-15	28.0
WP_155224223.1\|420177_421536_+\|transposase	transposase	NA	NA	NA	NA
WP_014124972.1\|421608_422004_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	2.7e-15	37.0
WP_103096907.1\|422100_422583_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014124974.1\|422676_423285_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.1e-68	58.6
WP_103083422.1\|423826_424180_-	GtrA family protein	NA	NA	NA	NA
WP_155224224.1\|424503_425301_+	DUF1189 family protein	NA	NA	NA	NA
WP_155224225.1\|425379_426333_+	hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_155224226.1\|427358_429203_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_069028984.1\|429310_429604_-	iron-sulfur cluster biosynthesis protein	NA	NA	NA	NA
WP_061841155.1\|429615_430281_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_061841156.1\|430292_430922_-	response regulator transcription factor	NA	NA	NA	NA
WP_061841157.1\|430918_431998_-	sensor histidine kinase	NA	NA	NA	NA
WP_014124985.1\|431994_432726_-	cell wall-active antibiotics response protein	NA	NA	NA	NA
WP_014124986.1\|432842_433325_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_103096901.1\|433463_434642_-	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_014123593.1\|434730_436089_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

446780 : 512688

Streptococcus_phage(30.77%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014124993.1\|446780_447071_+\|transposase	transposase	NA	NA	NA	NA
WP_041591832.1\|447067_447322_+	hypothetical protein	NA	NA	NA	NA
WP_155224230.1\|447707_448895_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_061841171.1\|448887_449604_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_155224231.1\|449611_450766_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_069028991.1\|450806_452294_-	glycosyltransferase	NA	NA	NA	NA
WP_155224232.1\|452482_454756_-	glycosyltransferase	NA	NA	NA	NA
WP_155224233.1\|454838_456572_-	hypothetical protein	NA	NA	NA	NA
WP_155224234.1\|456741_457848_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155224235.1\|458206_459345_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.3e-75	54.8
WP_155224236.1\|459606_460914_-	glycosyltransferase	NA	NA	NA	NA
WP_155224237.1\|461348_463622_-	glycosyltransferase	NA	NA	NA	NA
WP_155224238.1\|463705_465439_-	hypothetical protein	NA	NA	NA	NA
WP_155224239.1\|465776_466915_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.8e-75	54.8
WP_155224240.1\|467121_468420_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	4.2e-33	28.7
WP_061840820.1\|468985_469213_-	hypothetical protein	NA	NA	NA	NA
WP_155224241.1\|469531_470938_-	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_103103327.1\|470930_472664_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_103103326.1\|472697_473723_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_103103325.1\|473715_474432_-	D-ribitol-5-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_155224242.1\|474647_475946_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.9e-57	30.6
WP_014125011.1\|475983_477174_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_103083399.1\|477201_477654_-	DUF5590 domain-containg protein	NA	NA	NA	NA
WP_155224243.1\|477791_480542_-	DEAD/DEAH box helicase family protein	A0A0A7RWA3	Clostridium_phage	9.0e-17	32.3
WP_103097272.1\|480959_481160_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.6e-21	69.7
WP_014125015.1\|481361_482456_-	hypothetical protein	NA	NA	NA	NA
WP_069028958.1\|482663_484082_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_155224801.1\|484266_485613_+	excinuclease ABC subunit A	M1Q231	Streptococcus_phage	5.6e-97	43.6
WP_155224244.1\|485703_487743_+	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.8e-71	32.7
WP_103091748.1\|487910_488975_+	ABC transporter permease	NA	NA	NA	NA
WP_103099916.1\|488977_489658_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-27	35.0
WP_103100407.1\|489734_490334_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_103100406.1\|490413_491130_-	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.1e-30	36.2
WP_155224245.1\|491122_492943_-	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA
WP_103083833.1\|492946_494464_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_155224802.1\|494614_496051_-	transcriptional regulator	NA	NA	NA	NA
WP_155224246.1\|496040_497357_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_155224247.1\|497875_498571_+	peptidoglycan DD-metalloendopeptidase family protein	V5R8R0	Arthrobacter_phage	7.6e-05	41.4
WP_094244165.1\|498989_500159_+	MFS transporter	A0A1B0RXA6	Streptococcus_phage	1.3e-60	34.8
WP_061840830.1\|500430_500688_-	DUF3290 family protein	NA	NA	NA	NA
WP_061840831.1\|500775_501216_-	OsmC family protein	NA	NA	NA	NA
WP_155224248.1\|501456_502221_-	peptidase S66 family protein	NA	NA	NA	NA
WP_094243479.1\|502710_503571_+	hypothetical protein	NA	NA	NA	NA
WP_155224249.1\|503656_504400_-	DUF1275 family protein	NA	NA	NA	NA
WP_014123848.1\|504968_506075_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155224250.1\|506725_508144_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_014123528.1\|508684_510007_+\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	2.9e-90	41.4
WP_155224251.1\|511326_512688_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

657374 : 712423

Streptococcus_phage(25.0%)

integrase,transposase,holin

attL 684500:684521|attR 687851:687872

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155224281.1\|657374_658625_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	2.4e-110	57.4
WP_155224282.1\|659099_660209_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_155224283.1\|660403_661246_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014125237.1\|661627_662602_-	amidinotransferase	NA	NA	NA	NA
WP_014125238.1\|662685_662997_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_014125239.1\|663028_663451_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_014125240.1\|663450_663717_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_014125241.1\|663940_664600_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_014125242.1\|664830_666780_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	6.3e-57	32.1
WP_014125243.1\|666909_668022_+	alanine dehydrogenase	NA	NA	NA	NA
WP_155224284.1\|668235_668616_-	glyoxalase	NA	NA	NA	NA
WP_069029073.1\|668854_669850_+	YhdH/YhfP family quinone oxidoreductase	NA	NA	NA	NA
WP_155224285.1\|669846_670593_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
WP_014125247.1\|670612_671167_+	phosphopantothenoylcysteine decarboxylase	Q9J5A8	Fowlpox_virus	6.8e-25	36.9
WP_014125248.1\|671173_671812_+	ECF transporter S component	NA	NA	NA	NA
WP_014125249.1\|671856_672195_-	hypothetical protein	NA	NA	NA	NA
WP_014125250.1\|672485_673478_+	ribonucleoside hydrolase	NA	NA	NA	NA
WP_014125251.1\|673474_674026_+	ECF transporter S component	NA	NA	NA	NA
WP_155224286.1\|674156_675194_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_155224287.1\|675214_676486_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_155224288.1\|676511_676796_-	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_155224289.1\|676792_677254_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_094243418.1\|677299_678289_-	transketolase	NA	NA	NA	NA
WP_094243417.1\|678301_679204_-	transketolase	NA	NA	NA	NA
WP_155224290.1\|679922_680372_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
WP_155224291.1\|680739_681075_-	hypothetical protein	NA	NA	NA	NA
WP_155224292.1\|681290_684341_-	HsdR family type I site-specific deoxyribonuclease	NA	NA	NA	NA
684500:684521	attL	NA	NA	NA	NA
WP_155224293.1\|684525_685629_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_155224294.1\|685707_686637_+\|integrase	tyrosine-type recombinase/integrase	A8ATM2	Listeria_phage	3.0e-81	48.6
WP_155224295.1\|686688_687927_-	restriction endonuclease subunit S	NA	NA	NA	NA
687851:687872	attR	NA	NA	NA	NA
WP_155224296.1\|687919_689512_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.5e-120	48.0
WP_103097571.1\|689697_690426_-	metallophosphoesterase	NA	NA	NA	NA
WP_155224297.1\|692447_693809_+\|transposase	transposase	NA	NA	NA	NA
WP_103083945.1\|694233_694917_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_014125273.1\|694916_695759_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_103097531.1\|695957_697145_-	ATP-binding protein	NA	NA	NA	NA
WP_061841382.1\|697408_698740_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_014125276.1\|698809_699220_-	hypothetical protein	NA	NA	NA	NA
WP_014125277.1\|699540_699759_-	hypothetical protein	NA	NA	NA	NA
WP_155224298.1\|699887_700295_-	PIN domain-containing protein	NA	NA	NA	NA
WP_014125279.1\|700278_700575_-	hypothetical protein	NA	NA	NA	NA
WP_155224299.1\|700810_702172_+\|transposase	transposase	NA	NA	NA	NA
WP_155224300.1\|702414_703260_+	DUF2179 domain-containing protein	NA	NA	NA	NA
WP_061841094.1\|703372_703942_-	methylphosphotriester-DNA--protein-cysteine methyltransferase family protein	NA	NA	NA	NA
WP_155224301.1\|703955_704456_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.9e-29	41.7
WP_155224302.1\|704630_705794_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	1.1e-80	42.6
WP_155224303.1\|705878_706592_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_155224304.1\|706593_707457_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_103100126.1\|707946_708888_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_155224305.1\|709049_710063_+	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_069028782.1\|710371_710515_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_094243738.1\|711217_712423_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.4e-78	43.6

DBSCAN-SWA_4

993497 : 1101982

101

Streptococcus_phage(31.58%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155224367.1\|993497_994856_-\|transposase	transposase	NA	NA	NA	NA
WP_155224368.1\|994992_996279_-	PRD domain-containing protein	NA	NA	NA	NA
WP_155224369.1\|996578_997325_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_155224370.1\|997384_998278_-	oxidoreductase	NA	NA	NA	NA
WP_155224371.1\|998302_998590_-	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_155224372.1\|998618_999941_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_155224373.1\|999933_1000404_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_103092085.1\|1001183_1002359_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_155224374.1\|1002355_1002889_+	DUF4411 family protein	NA	NA	NA	NA
WP_069028671.1\|1003003_1003873_-	glycoside hydrolase family 25	A0A222Z5F8	Bacillus_phage	9.1e-16	27.1
WP_069028670.1\|1003934_1004147_-	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_014123817.1\|1004170_1004398_-	hypothetical protein	NA	NA	NA	NA
WP_155224375.1\|1004620_1004911_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041591758.1\|1005994_1006228_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_103097400.1\|1006540_1007011_+	hypothetical protein	NA	NA	NA	NA
WP_155224376.1\|1007078_1007906_-	hypothetical protein	NA	NA	NA	NA
WP_061841113.1\|1008303_1008633_-	hypothetical protein	NA	NA	NA	NA
WP_061841114.1\|1008638_1008917_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_155224377.1\|1009165_1011061_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_155224378.1\|1011153_1011420_-	PRD domain-containing protein	NA	NA	NA	NA
WP_155224379.1\|1011454_1012009_-	PRD domain-containing protein	NA	NA	NA	NA
WP_103097398.1\|1012413_1012647_-	toxin-antitoxin system, antitoxin component	NA	NA	NA	NA
WP_103097396.1\|1012740_1013685_-	acetamidase/formamidase family protein	NA	NA	NA	NA
WP_014123808.1\|1013814_1014006_+	addiction module toxin, HicA family	NA	NA	NA	NA
WP_014123807.1\|1014044_1014446_+	hypothetical protein	A0A0K2CYJ8	Paenibacillus_phage	2.5e-13	37.2
WP_155224380.1\|1014868_1015147_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_028790514.1\|1015580_1015850_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5S8E8	Streptococcus_phage	3.0e-18	53.9
WP_028790515.1\|1015846_1016080_-	toxin-antitoxin system antitoxin component	NA	NA	NA	NA
WP_155224381.1\|1016266_1017217_-	acetamidase	NA	NA	NA	NA
WP_155224382.1\|1017645_1018782_-	hypothetical protein	NA	NA	NA	NA
WP_014123593.1\|1018881_1020240_-\|transposase	transposase	NA	NA	NA	NA
WP_155224383.1\|1020477_1022655_-	AAA family ATPase	NA	NA	NA	NA
WP_155224384.1\|1022897_1024328_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_094243904.1\|1025874_1026360_+	hypothetical protein	NA	NA	NA	NA
WP_155224386.1\|1026484_1027591_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_155224387.1\|1027805_1028264_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_069028523.1\|1028467_1029790_+\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	6.7e-95	43.0
WP_155224388.1\|1030415_1030742_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155224389.1\|1031658_1031964_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_155224390.1\|1031964_1032873_-	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_162302199.1\|1034455_1035703_-	type III-A CRISPR-associated protein Csm6	NA	NA	NA	NA
WP_155224392.1\|1035704_1036718_-	type III-A CRISPR-associated RAMP protein Csm5	NA	NA	NA	NA
WP_155224393.1\|1036735_1037632_-	type III-A CRISPR-associated RAMP protein Csm4	NA	NA	NA	NA
WP_155224394.1\|1037628_1038303_-	type III-A CRISPR-associated RAMP protein Csm3	NA	NA	NA	NA
WP_155224395.1\|1038314_1038743_-	type III-A CRISPR-associated protein Csm2	NA	NA	NA	NA
WP_155224396.1\|1038751_1041040_-	type III-A CRISPR-associated protein Cas10/Csm1	NA	NA	NA	NA
WP_083207540.1\|1041032_1041779_-	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA
WP_069028523.1\|1043238_1044561_-\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	6.7e-95	43.0
WP_155224397.1\|1045129_1046074_-	acetamidase	NA	NA	NA	NA
WP_155224398.1\|1046353_1047715_+\|transposase	transposase	NA	NA	NA	NA
WP_094243916.1\|1047807_1048719_-	hypothetical protein	NA	NA	NA	NA
WP_162302200.1\|1048955_1050320_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_155224400.1\|1050453_1051380_-	ATP-binding domain-containing protein	A0A1V0SAC2	Catovirus	4.1e-06	27.1
WP_155224239.1\|1051547_1052685_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.8e-75	54.8
WP_061841463.1\|1052917_1053808_-	hypothetical protein	NA	NA	NA	NA
WP_155224401.1\|1055860_1055998_+	hypothetical protein	NA	NA	NA	NA
WP_155224402.1\|1056086_1056830_-	hypothetical protein	NA	NA	NA	NA
WP_155224403.1\|1057440_1057581_-	hypothetical protein	NA	NA	NA	NA
WP_162302201.1\|1057887_1058394_-	hypothetical protein	NA	NA	NA	NA
WP_162302202.1\|1058472_1059276_-	hypothetical protein	NA	NA	NA	NA
WP_155224406.1\|1060992_1062159_-	nucleotide sugar dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	1.5e-98	49.2
WP_155224407.1\|1062224_1063031_-	glycosyltransferase	A0A1V0SAH6	Catovirus	6.1e-14	37.7
WP_155224408.1\|1063352_1064675_-\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	9.7e-94	42.4
WP_155224409.1\|1064858_1065824_-	hypothetical protein	NA	NA	NA	NA
WP_155224410.1\|1065860_1067027_-	nucleotide sugar dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	4.5e-103	50.5
WP_162302203.1\|1067059_1068016_-	glycosyltransferase	NA	NA	NA	NA
WP_155224412.1\|1068126_1068543_-	glycosyltransferase	NA	NA	NA	NA
WP_103100756.1\|1068696_1069056_-	hypothetical protein	NA	NA	NA	NA
WP_155224413.1\|1069045_1069195_-	hypothetical protein	NA	NA	NA	NA
WP_162302204.1\|1069287_1069437_-	hypothetical protein	NA	NA	NA	NA
WP_155224415.1\|1069610_1070354_-	hypothetical protein	NA	NA	NA	NA
WP_155224416.1\|1070374_1071802_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_155224417.1\|1071794_1072244_-	hypothetical protein	NA	NA	NA	NA
WP_155224418.1\|1072304_1072748_-	hypothetical protein	NA	NA	NA	NA
WP_155224419.1\|1072794_1073961_-	nucleotide sugar dehydrogenase	M1HZB2	Paramecium_bursaria_Chlorella_virus	1.5e-101	50.6
WP_155224407.1\|1074026_1074833_-	glycosyltransferase	A0A1V0SAH6	Catovirus	6.1e-14	37.7
WP_155224420.1\|1074954_1076037_-	hypothetical protein	NA	NA	NA	NA
WP_155224421.1\|1076159_1077176_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.6e-99	53.8
WP_155224422.1\|1077177_1078293_-	glycosyltransferase	NA	NA	NA	NA
WP_155224423.1\|1078352_1078973_-	lipid carrier--UDP-N-acetylgalactosaminyltransferase	NA	NA	NA	NA
WP_155224424.1\|1078962_1080084_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_155224425.1\|1080076_1080718_-	sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase	NA	NA	NA	NA
WP_155224426.1\|1080726_1082544_-	polysaccharide biosynthesis protein	L7Y3T9	Megavirus	9.1e-26	28.7
WP_155224808.1\|1082556_1083309_-	tyrosine protein phosphatase	NA	NA	NA	NA
WP_155224427.1\|1083327_1084029_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_155224428.1\|1084041_1084839_-	tyrosine protein kinase	NA	NA	NA	NA
WP_155224429.1\|1084853_1085786_-	transcriptional regulator	A0A1X9I5X1	Streptococcus_phage	1.7e-23	32.5
WP_069028625.1\|1085816_1086605_-	hypothetical protein	NA	NA	NA	NA
WP_155224408.1\|1087003_1088326_-\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	9.7e-94	42.4
WP_050989746.1\|1088815_1089112_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155224430.1\|1089388_1090438_-	peptidoglycan DD-metalloendopeptidase family protein	A0A075BS18	Microcystis_phage	3.1e-18	49.5
WP_155224431.1\|1090670_1091840_+	AI-2E family transporter	NA	NA	NA	NA
WP_162302228.1\|1091986_1092409_-	flavodoxin	NA	NA	NA	NA
WP_155224433.1\|1092599_1093757_+	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_103083471.1\|1093790_1093976_-	hypothetical protein	NA	NA	NA	NA
WP_155224434.1\|1093975_1094677_-	flavodoxin family protein	NA	NA	NA	NA
WP_061840351.1\|1095257_1096256_-	NERD domain-containing protein	NA	NA	NA	NA
WP_103083474.1\|1096369_1096612_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_155224809.1\|1096633_1097611_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_155224435.1\|1099008_1100736_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_155224436.1\|1100728_1101982_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-28	36.9

DBSCAN-SWA_5

1450123 : 1457865

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050989791.1\|1450123_1450972_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.1e-57	45.9
WP_061840900.1\|1451316_1452123_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.1e-38	37.3
WP_155224545.1\|1452119_1453367_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.3e-113	54.8
WP_014123414.1\|1453547_1453745_+	hypothetical protein	NA	NA	NA	NA
WP_014123413.1\|1453906_1455529_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.9e-47	26.2
WP_155224546.1\|1455584_1456454_-	DegV family EDD domain-containing protein	A0A0N9SI50	Staphylococcus_phage	4.2e-13	30.9
WP_155224547.1\|1456572_1457865_-	adenylosuccinate synthase	L7Y4J5	Megavirus	4.0e-68	35.8

DBSCAN-SWA_6

1568779 : 1627367

Streptococcus_phage(33.33%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155224124.1\|1568779_1570198_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_061841008.1\|1570428_1571151_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_061841007.1\|1571280_1572684_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_014125800.1\|1572953_1573928_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_069028902.1\|1574723_1576013_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_061841006.1\|1576125_1576686_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_155224571.1\|1576721_1580255_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_082786924.1\|1580290_1581868_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_014125796.1\|1581864_1582122_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_014125795.1\|1582197_1582617_+	septum formation initiator family protein	NA	NA	NA	NA
WP_014125794.1\|1582824_1583268_+	RNA-binding protein S1	NA	NA	NA	NA
WP_061841005.1\|1583365_1584790_+\|tRNA	tRNA lysidine(34) synthetase TilS	A0A0N7G7K4	Chrysochromulina_ericina_virus	9.4e-10	24.1
WP_061841004.1\|1584770_1585319_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	1.2e-10	26.6
WP_155224572.1\|1585387_1587490_+\|protease	ATP-dependent zinc metalloprotease FtsH	H8ZJI5	Ostreococcus_tauri_virus	1.8e-110	49.5
WP_014125790.1\|1587635_1588523_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_061841021.1\|1588711_1590163_+\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	3.8e-91	37.5
WP_162302190.1\|1591084_1591318_+	hypothetical protein	NA	NA	NA	NA
WP_061841289.1\|1598243_1599431_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	9.5e-149	70.5
WP_061841290.1\|1599586_1600363_+	esterase family protein	NA	NA	NA	NA
WP_061841291.1\|1600621_1601698_+	DUF871 domain-containing protein	NA	NA	NA	NA
WP_162302230.1\|1601691_1602585_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_155224573.1\|1602600_1604070_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_061841293.1\|1604066_1604696_+	HAD family phosphatase	NA	NA	NA	NA
WP_155224815.1\|1604804_1606688_+	penicillin binding protein PBP4B	NA	NA	NA	NA
WP_061841294.1\|1606814_1607663_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_061841295.1\|1607774_1608521_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_061841296.1\|1608549_1609506_+	hypothetical protein	NA	NA	NA	NA
WP_061841297.1\|1609622_1610438_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_061841298.1\|1610439_1611063_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155224574.1\|1611095_1613726_-	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	7.4e-85	37.6
WP_155224575.1\|1613957_1614413_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_068708671.1\|1614520_1615081_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_061841300.1\|1615094_1615289_+	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_155224576.1\|1615310_1615835_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_155224223.1\|1616060_1617419_+\|transposase	transposase	NA	NA	NA	NA
WP_155224577.1\|1617484_1618027_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_002319817.1\|1618214_1618895_-\|transposase	IS6-like element ISS1N family transposase	A0A1X9I6C6	Streptococcus_phage	2.5e-109	84.1
WP_014123534.1\|1619086_1619653_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_069028532.1\|1619701_1622359_+	MMPL family transporter	NA	NA	NA	NA
WP_002319817.1\|1622450_1623131_-\|transposase	IS6-like element ISS1N family transposase	A0A1X9I6C6	Streptococcus_phage	2.5e-109	84.1
WP_014123534.1\|1623322_1623889_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_069028532.1\|1623937_1626595_+	MMPL family transporter	NA	NA	NA	NA
WP_002319817.1\|1626686_1627367_-\|transposase	IS6-like element ISS1N family transposase	A0A1X9I6C6	Streptococcus_phage	2.5e-109	84.1

DBSCAN-SWA_7

1819781 : 1856575

Staphylococcus_phage(16.67%)

lysis,tRNA,transposase,portal,integrase,terminase

attL 1845323:1845344|attR 1859435:1859456

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061840730.1\|1819781_1820429_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_069029245.1\|1820622_1821465_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.2e-58	43.8
WP_155224604.1\|1821504_1822275_-	hypothetical protein	NA	NA	NA	NA
WP_061840727.1\|1822443_1823253_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.9e-38	37.8
WP_094243219.1\|1823368_1824205_+	HAD family phosphatase	NA	NA	NA	NA
WP_155224605.1\|1824284_1824674_-	hypothetical protein	NA	NA	NA	NA
WP_094243221.1\|1824744_1825215_-	universal stress protein	NA	NA	NA	NA
WP_061840724.1\|1825288_1825561_-	hypothetical protein	NA	NA	NA	NA
WP_061840723.1\|1825800_1826232_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_155224606.1\|1826691_1827963_-	AAA family ATPase	A0A127AWE7	Bacillus_phage	2.9e-103	47.7
WP_155224607.1\|1828102_1828741_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_155224816.1\|1828761_1829706_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_155224817.1\|1829711_1830467_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_155224608.1\|1830612_1832031_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_155224609.1\|1832324_1834538_+	RelA/SpoT family protein	A0A1B1IUF0	uncultured_Mediterranean_phage	1.7e-10	35.1
WP_061840719.1\|1834542_1834992_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_094243224.1\|1835216_1836866_+	phosphoenolpyruvate carboxykinase (ATP)	NA	NA	NA	NA
WP_061840717.1\|1837047_1837392_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_061840716.1\|1837388_1840049_+	HAD-IC family P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	1.3e-68	28.5
WP_061840751.1\|1840194_1841685_+	phosphoglucomutase	NA	NA	NA	NA
WP_155224610.1\|1841839_1843222_+	amino acid permease	NA	NA	NA	NA
WP_155224611.1\|1843278_1844478_-	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	4.6e-34	26.7
WP_061840713.1\|1844532_1845210_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
1845323:1845344	attL	NA	NA	NA	NA
WP_155224612.1\|1845471_1846617_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5S7K9	Streptococcus_phage	2.9e-54	33.0
WP_155224613.1\|1846668_1847298_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155224614.1\|1847509_1847776_+	DNA-binding protein	NA	NA	NA	NA
WP_155224615.1\|1847868_1848069_+	hypothetical protein	NA	NA	NA	NA
WP_155224616.1\|1848211_1848361_+	hypothetical protein	NA	NA	NA	NA
WP_155224617.1\|1848472_1848805_+	hypothetical protein	NA	NA	NA	NA
WP_162302210.1\|1848788_1849673_+	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	2.1e-20	28.7
WP_155224619.1\|1849672_1851271_+	DNA primase	A0A1B1P7L5	Bacillus_phage	1.3e-23	29.7
WP_155224620.1\|1851538_1851787_+	hypothetical protein	NA	NA	NA	NA
WP_155224621.1\|1851791_1852301_+	hypothetical protein	NA	NA	NA	NA
WP_069029230.1\|1852290_1852677_+	HNH endonuclease	Q8SBK4	Clostridium_phage	3.4e-15	38.9
WP_155224622.1\|1853095_1853572_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_155224623.1\|1853564_1855256_+\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	2.7e-125	43.5
WP_155224624.1\|1855408_1856575_+\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	1.7e-57	33.0
1859435:1859456	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1908670 : 1917074

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014123956.1\|1908670_1909444_+	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	1.2e-06	25.1
WP_155224642.1\|1909458_1910751_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_155224643.1\|1910747_1911983_+	SufS family cysteine desulfurase	Q2XUY6	environmental_halophage	1.3e-111	48.3
WP_155224644.1\|1911969_1912443_+	SUF system NifU family Fe-S cluster assembly protein	A0A2H4N7M4	Lake_Baikal_phage	4.5e-09	28.5
WP_155224645.1\|1912549_1913254_+	NAD-dependent protein deacylase	S5M4R0	Bacillus_phage	6.9e-22	30.6
WP_155224646.1\|1913482_1915222_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	5.6e-41	29.0
WP_069029204.1\|1915211_1917074_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.7e-38	26.1

DBSCAN-SWA_9

1928904 : 1937194

Lactobacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061840804.1\|1928904_1930143_-	NADPH-dependent FMN reductase	A0A2P0ZL82	Lactobacillus_phage	8.3e-63	61.8
WP_061840803.1\|1930161_1930770_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	4.1e-55	52.8
WP_061840802.1\|1930969_1931674_-	deoxynucleoside kinase	K4I4F1	Lactobacillus_phage	5.4e-43	40.2
WP_061840801.1\|1932016_1933486_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.3e-80	38.6
WP_061840800.1\|1933715_1935428_+	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	1.4e-07	21.8
WP_061840799.1\|1935424_1937194_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.8e-49	26.9

DBSCAN-SWA_10

2057502 : 2070425

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061840414.1\|2057502_2058903_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	2.7e-41	28.9
WP_069029149.1\|2059122_2060865_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.7e-53	44.3
WP_061840413.1\|2060882_2061194_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_014124100.1\|2061255_2061852_+	recombination protein RecR	NA	NA	NA	NA
WP_155224678.1\|2061881_2062535_+	dTMP kinase	M1PSC7	Streptococcus_phage	8.3e-54	51.7
WP_014124102.1\|2062531_2062864_+	hypothetical protein	NA	NA	NA	NA
WP_061840411.1\|2062906_2063839_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	4.2e-35	35.0
WP_155224679.1\|2063862_2064693_+	signal peptidase	NA	NA	NA	NA
WP_094243284.1\|2064679_2065036_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.1e-07	62.2
WP_155224680.1\|2065101_2065968_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	6.0e-84	58.7
WP_061840407.1\|2066021_2067149_+	DNA polymerase IV	NA	NA	NA	NA
WP_094243286.1\|2067602_2068205_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	5.1e-50	56.0
WP_155224681.1\|2068229_2070425_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	7.3e-280	65.4

DBSCAN-SWA_11

2257337 : 2304231

unidentified_phage(11.11%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_130706127.1\|2257337_2258546_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.4e-46	50.5
WP_061840625.1\|2258675_2259131_+	hypothetical protein	NA	NA	NA	NA
WP_069029111.1\|2259213_2259978_+	DNA-entry nuclease	NA	NA	NA	NA
WP_155224730.1\|2260330_2260903_+	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	7.1e-25	75.0
WP_012345024.1\|2261339_2262668_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_010753318.1\|2262748_2262898_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_155224731.1\|2263112_2263679_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_103083436.1\|2263671_2264358_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_014125356.1\|2264376_2264583_+	YqgQ family protein	NA	NA	NA	NA
WP_155224732.1\|2264583_2265552_+	ROK family glucokinase	NA	NA	NA	NA
WP_014125354.1\|2265566_2265968_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_014125353.1\|2266040_2266208_-	DUF3042 family protein	NA	NA	NA	NA
WP_155224733.1\|2266808_2268170_-\|transposase	transposase	NA	NA	NA	NA
WP_155224734.1\|2269269_2270271_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	8.5e-42	32.8
WP_155224735.1\|2270267_2271755_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_155224736.1\|2271787_2272780_+	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	1.8e-15	24.9
WP_103083441.1\|2272882_2273443_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_014125344.1\|2273563_2274391_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_155224737.1\|2274387_2275257_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_162302222.1\|2275285_2275699_-	hypothetical protein	NA	NA	NA	NA
WP_014123593.1\|2275875_2277234_+\|transposase	transposase	NA	NA	NA	NA
WP_155224739.1\|2277207_2278110_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_094243349.1\|2278463_2279180_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_061840610.1\|2279697_2280186_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_155224740.1\|2280160_2281168_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-61	41.4
WP_103100220.1\|2281370_2282168_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_155224741.1\|2282274_2283156_+	elongation factor Ts	NA	NA	NA	NA
WP_041591846.1\|2283370_2284090_+	UMP kinase	NA	NA	NA	NA
WP_014125333.1\|2284093_2284651_+	ribosome recycling factor	NA	NA	NA	NA
WP_155224742.1\|2285083_2285884_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.3e-21	41.7
WP_155224743.1\|2285880_2286687_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_155224744.1\|2286838_2288104_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_155224745.1\|2288188_2289895_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_155224746.1\|2290106_2294444_+	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	6.1e-20	38.9
WP_155224747.1\|2294822_2295620_+	recombination regulator RecX	NA	NA	NA	NA
WP_155224748.1\|2295609_2296752_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_155224749.1\|2296847_2297381_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_103097109.1\|2297673_2298111_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_155224750.1\|2298305_2299685_+	DUF21 domain-containing protein	NA	NA	NA	NA
WP_155224751.1\|2299872_2301453_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.3e-31	27.9
WP_061841338.1\|2301526_2301844_-	DUF1827 family protein	NA	NA	NA	NA
WP_094243355.1\|2301987_2304231_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	3.3e-126	39.6

DBSCAN-SWA_12

2323683 : 2383082

Streptococcus_phage(15.38%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094243738.1\|2323683_2324889_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.4e-78	43.6
WP_155224753.1\|2325271_2325799_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_041591845.1\|2326119_2326563_+	type II toxin-antitoxin system HicB family antitoxin	A0A1X9I727	Streptococcus_phage	5.8e-43	58.4
WP_103103519.1\|2326791_2327514_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_094243371.1\|2327702_2328602_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.7e-25	32.4
WP_061841385.1\|2328594_2329848_+	ABC transporter permease	NA	NA	NA	NA
WP_061841384.1\|2330143_2331022_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014125285.1\|2331122_2331995_-	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	7.0e-08	38.0
WP_061841383.1\|2332108_2333107_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_069029098.1\|2333291_2334143_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_162302223.1\|2334200_2334926_+	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_155224755.1\|2334909_2336271_-\|transposase	transposase	NA	NA	NA	NA
WP_155224756.1\|2336741_2337305_+	hypothetical protein	NA	NA	NA	NA
WP_155224239.1\|2337880_2339019_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.8e-75	54.8
WP_130706308.1\|2339972_2340407_+	VOC family protein	NA	NA	NA	NA
WP_061841098.1\|2340662_2340887_+	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	1.8e-13	47.9
WP_155224757.1\|2341000_2343163_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	5.9e-266	62.9
WP_103892652.1\|2343188_2344157_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	3.7e-127	69.8
WP_094243698.1\|2344382_2344820_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_130708545.1\|2344923_2345874_-	D-2-hydroxyacid dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	6.9e-33	29.8
WP_155224758.1\|2346055_2347024_+	ornithine cyclodeaminase family protein	A0A1V0SL93	Klosneuvirus	4.1e-17	28.3
WP_069028792.1\|2348149_2348899_+	DUF4336 domain-containing protein	NA	NA	NA	NA
WP_103892809.1\|2348921_2349908_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_094243694.1\|2350161_2350995_+	YitT family protein	NA	NA	NA	NA
WP_155224759.1\|2351315_2352086_+	HTH domain-containing protein	NA	NA	NA	NA
WP_014123593.1\|2352059_2353418_-\|transposase	transposase	NA	NA	NA	NA
WP_162302224.1\|2353705_2354782_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_094243692.1\|2354914_2356354_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_094243691.1\|2356389_2356713_+	PTS cellobiose transporter subunit IIB	NA	NA	NA	NA
WP_094243690.1\|2356743_2357058_+	PTS cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_094243689.1\|2357079_2357595_+	hypothetical protein	NA	NA	NA	NA
WP_094243688.1\|2357610_2358960_+	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA
WP_094243687.1\|2359484_2360033_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_094243686.1\|2360236_2360668_+	YjdF family protein	NA	NA	NA	NA
WP_094243685.1\|2360862_2361066_-	hypothetical protein	NA	NA	NA	NA
WP_155224822.1\|2361455_2361635_-	hypothetical protein	NA	NA	NA	NA
WP_162302225.1\|2362474_2363626_-	MFS transporter	NA	NA	NA	NA
WP_061841374.1\|2363718_2364144_+	GNAT family N-acetyltransferase	A0A1X9I6I8	Streptococcus_phage	1.9e-27	46.0
WP_014124487.1\|2364538_2365000_+	hypothetical protein	NA	NA	NA	NA
WP_155224762.1\|2365358_2365571_+	copper chaperone	NA	NA	NA	NA
WP_162302226.1\|2365642_2368159_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.4e-95	33.7
WP_014124664.1\|2368377_2368833_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.1e-17	34.9
WP_155224764.1\|2369204_2369900_+	endonuclease III	NA	NA	NA	NA
WP_103892803.1\|2370903_2371719_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_103892801.1\|2376482_2377922_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_155224765.1\|2378140_2378518_+	hypothetical protein	NA	NA	NA	NA
WP_155224766.1\|2381244_2381754_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014123593.1\|2381723_2383082_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_13

2395885 : 2455421

uncultured_virus(18.18%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_103892782.1\|2395885_2396518_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014124508.1\|2396780_2397065_+	co-chaperone GroES	A0A221S465	uncultured_virus	9.5e-15	42.4
WP_155224771.1\|2397094_2398735_+	chaperonin GroEL	A0A219YK78	uncultured_virus	1.1e-150	54.0
WP_061841450.1\|2399278_2400106_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_061841449.1\|2400239_2400953_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_061841448.1\|2401110_2402379_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA
WP_061841447.1\|2402538_2403936_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_069028902.1\|2404496_2405786_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_014124511.1\|2406028_2407495_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.4e-111	46.0
WP_014124512.1\|2407519_2408344_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	5.7e-76	55.7
WP_155224772.1\|2408437_2410240_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_061841211.1\|2410422_2411253_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014124515.1\|2411278_2411734_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_014124516.1\|2411812_2412379_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_061841213.1\|2412416_2412944_-	hypothetical protein	NA	NA	NA	NA
WP_061841214.1\|2412998_2413871_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_061841215.1\|2414089_2414770_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	1.1e-45	44.4
WP_061841216.1\|2414922_2415903_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_061841217.1\|2416088_2416553_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_061841218.1\|2416554_2417088_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_061841219.1\|2417167_2417701_-	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	1.6e-23	37.6
WP_061841221.1\|2418668_2419601_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_155224773.1\|2420133_2421399_+	GntP family permease	NA	NA	NA	NA
WP_061841223.1\|2421427_2422567_+	glycerate kinase	W6LM47	Streptococcus_phage	3.4e-47	38.3
WP_103103414.1\|2422672_2423404_-	hypothetical protein	NA	NA	NA	NA
WP_155224774.1\|2423702_2425022_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_155224775.1\|2425050_2426031_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_155224776.1\|2426051_2427374_+	alpha-L-fucosidase	NA	NA	NA	NA
WP_155224777.1\|2427370_2428744_+	family 1 glycosylhydrolase	A0A0B5JD41	Pandoravirus	1.9e-44	29.7
WP_069028824.1\|2428759_2429620_+	ROK family protein	NA	NA	NA	NA
WP_014123593.1\|2429708_2431067_-\|transposase	transposase	NA	NA	NA	NA
WP_069028825.1\|2431311_2431563_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_094243658.1\|2431563_2431881_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_155224778.1\|2432107_2434054_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_083207560.1\|2434071_2434641_+	SIS domain-containing protein	A0A067XQR2	Caulobacter_phage	4.7e-13	30.6
WP_069028828.1\|2434662_2434932_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_094243657.1\|2434949_2436287_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_103103408.1\|2436300_2438292_+	transketolase	NA	NA	NA	NA
WP_155224779.1\|2438529_2439060_+	cupin domain-containing protein	NA	NA	NA	NA
WP_155224239.1\|2439156_2440295_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.8e-75	54.8
WP_069028835.1\|2440367_2440655_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_103892911.1\|2440651_2440900_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_155224780.1\|2441086_2441809_+	hypothetical protein	NA	NA	NA	NA
WP_155224781.1\|2441897_2443157_-\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	4.4e-27	25.7
WP_069028839.1\|2443436_2444108_+	hypothetical protein	NA	NA	NA	NA
WP_155224782.1\|2444783_2446718_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_069028841.1\|2446704_2447169_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_069028842.1\|2447181_2447496_+	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_069028843.1\|2447534_2448587_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_069028844.1\|2448825_2449284_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_155224783.1\|2449380_2450733_+\|transposase	transposase	NA	NA	NA	NA
WP_069028846.1\|2450828_2451482_+	hypothetical protein	NA	NA	NA	NA
WP_155224784.1\|2451720_2452998_+	sugar-phosphate kinase	NA	NA	NA	NA
WP_069029383.1\|2453138_2453852_+	HAD family hydrolase	NA	NA	NA	NA
WP_014123593.1\|2454062_2455421_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046246

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection