CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043931	Gimesia maris strain DSM 8797 chromosome, complete genome	3 crisprs	cas3,csa3,DinG,RT,WYL	1	1	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043931_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043931_1

329233-329339

Orphan

Consensus_repeat	Method
CCTAAAAAAGAGGAGCCCAAGAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP043931_1

>merge|NZ_CP043931|1|329233-329339|CRISPRCasFinder
GTCAAGAAGGAAGAGCCCAAAAAAGAAGCTCCTAAAAAAGAGGAGCCCAAGAAAGAAGAACCTAAGAAAGAGACCAAGCCTGCTCCTAAAAAGGAAGAGCCTAAAAA

>NZ_CP043931|1|1|329233-329339|CRISPRCasFinder
GTCAAGAAGGAAGAGCCCAAAAA	AGAAGCTCCTAAAAAAGAGGAG
CCCAAGAAAGAAGAACCTAAGAA	AGAGACCAAGCCTGCT
CCTAAAAAGGAAGAGCCTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043931.1\|WP_002649425.1\|317213_318950_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_149303493.1\|339734_348026_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275057
NZ_CP043931.1\|WP_002647358.1\|348117_352740_+\|nuclease	unknown	unknown	gnl\|CDD\|275057
NZ_CP043931.1\|WP_002647353.1\|334003_334462_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002649424.1\|316303_317209_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP043931.1\|WP_002647352.1\|333111_333876_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP043931.1\|WP_002647360.1\|354417_356259_-\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320687
NZ_CP043931.1\|WP_044240375.1\|331028_331787_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180411
NZ_CP043931.1\|WP_081459538.1\|332228_333080_+\|ThuA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377643
NZ_CP043931.1\|WP_002649421.1\|314215_315685_-\|sulfatase	unknown	unknown	gnl\|CDD\|293754
NZ_CP043931.1\|WP_002649423.1\|315908_316307_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP043931.1\|WP_044238713.1\|352896_354390_+\|sulfatase	unknown	unknown	gnl\|CDD\|293754
NZ_CP043931.1\|WP_002647354.1\|334876_339556_+\|nuclease	unknown	unknown	gnl\|CDD\|275057
NZ_CP043931.1\|WP_002649426.1\|318968_320633_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002649430.1\|326048_327731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_149303495.1\|322451_324152_+\|EscU/YscU/HrcU-family-type-III-secretion-system-export-apparatus-switch-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002649427.1\|320687_322379_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002649433.1\|330422_330950_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313
NZ_CP043931.1\|WP_002649429.1\|324234_325977_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002649431.1\|327979_329017_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224771

Protein	Function_ID	Function_description	E-value
NZ_CP043931.1\|WP_149303493.1\|339734_348026_+\|hypothetical-protein	gnl\|CDD\|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	1.60253e-13
NZ_CP043931.1\|WP_002647360.1\|354417_356259_-\|M48-family-metalloprotease	gnl\|CDD\|320687	cd07328, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi.	1.36678e-33
NZ_CP043931.1\|WP_002649424.1\|316303_317209_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.39066e-76
NZ_CP043931.1\|WP_002647352.1\|333111_333876_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	2.92162e-77
NZ_CP043931.1\|WP_002647354.1\|334876_339556_+\|nuclease	gnl\|CDD\|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	1.22436e-07
NZ_CP043931.1\|WP_081459538.1\|332228_333080_+\|ThuA-domain-containing-protein	gnl\|CDD\|377643	pfam06283, ThuA, Trehalose utilisation. This family consists of several bacterial ThuA like proteins. ThuA appears to be involved in utilisation of trehalose. The thuA and thuB genes form part of the trehalose/sucrose transport operon thuEFGKAB, which is located on the pSymB megaplasmid. The thuA and thuB genes are induced in vitro by trehalose but not by sucrose and the extent of its induction depends on the concentration of trehalose available in the medium.	4.15094e-28
NZ_CP043931.1\|WP_002649421.1\|314215_315685_-\|sulfatase	gnl\|CDD\|293754	cd16030, iduronate-2-sulfatase, iduronate-2-sulfatase. Iduronate 2-sulfatase is a sulfatase enzyme that catalyze the hydrolysis of sulfate ester bonds from a wide variety of substrates, including steroids, carbohydrates and proteins. Iduronate 2-sulfatase is required for the lysosomal degradation of heparan sulfate and dermatan sulfate. Mutations in the iduronate 2-sulfatase gene that result in enzymatic deficiency lead to the sex-linked mucopolysaccharidosis type II, also known as Hunter syndrome.	0
NZ_CP043931.1\|WP_002649423.1\|315908_316307_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.37717e-30
NZ_CP043931.1\|WP_044238713.1\|352896_354390_+\|sulfatase	gnl\|CDD\|293754	cd16030, iduronate-2-sulfatase, iduronate-2-sulfatase. Iduronate 2-sulfatase is a sulfatase enzyme that catalyze the hydrolysis of sulfate ester bonds from a wide variety of substrates, including steroids, carbohydrates and proteins. Iduronate 2-sulfatase is required for the lysosomal degradation of heparan sulfate and dermatan sulfate. Mutations in the iduronate 2-sulfatase gene that result in enzymatic deficiency lead to the sex-linked mucopolysaccharidosis type II, also known as Hunter syndrome.	0
NZ_CP043931.1\|WP_044240375.1\|331028_331787_-\|SDR-family-oxidoreductase	gnl\|CDD\|180411	PRK06123, PRK06123, SDR family oxidoreductase.	1.32767e-133
NZ_CP043931.1\|WP_002649433.1\|330422_330950_+\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	1.99425e-89
NZ_CP043931.1\|WP_002647358.1\|348117_352740_+\|nuclease	gnl\|CDD\|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	1.8506e-09
NZ_CP043931.1\|WP_002649431.1\|327979_329017_+\|c-type-cytochrome	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	2.37925e-91

>NZ_CP043931.1|WP_002649431.1|327979_329017_+|c-type-cytochrome
MASATYRKFARILSSGIVITLVVGFTVSLSQAEEPVIKVPLGLPPIEFPEDNPPTVEKIALGKQLYFDKRLSRDNTISCASCHSPVKGYSNADQFATGFKGQKGGRNSPTVINAAYNKFHFWDGRAGSLEEQALGPIANPIEMNLTTKEAVDRINSIPGYKKQFQKIFGSDATEENIAKAIATYERTILCGDAPYDRFKAGDKKALSESAQRGMQLFFGKAACSSCHSGPTFTDHAFHNVGVGMDAKEPDAGRKAISNLGGDHGSFKTPTVRDIARSAPYMHDGSLKTLKEVVEHYNKGGIPNEFLDEEIFKLNLTPQEVDDLVTFMKEGLTSSNYPEHKEPELP
>NZ_CP043931.1|WP_002649430.1|326048_327731_+|hypothetical-protein
MSSALIATTKSFCKRAWPGASIGVATLVIVPLMIKILMHLQGYRIPYNDQEIFSLHFTYLGISWVIFLSITVRALAGSQKYCRGLPISSRAIATWLMLAMVGLVVVLQLATNGAYRALFFDERWLADYWPVLGPLLFLVMLVLTGHAIYWTLNAPSYTRIILSMGIIVALFWWFLSRYFPDGFKADAVPWSHVTLGEFVLMQLVSLAAWYQGTRAFASVRSGTALPSPQWTQTRNWWDSLTTGASSSGHTTLESHRAALGRLHWRDSCQRAVIMGGGLFGIAVLVLNTTMRNANGSHPINITEGFMQIYLMFSIIAALVVGLVAGEGTCGPGRTEMKSFLAVTPLSDRDFAIALFVNLVKTVLYSSLLIQAGLMLNMLVFVAPGMLQGDQASIIISRGALYWFVFSVYTLACFWTIAANVISVLWTGRSWFYFLVIGSILGCFGLFVFIVNSTDRVTHSPNNLYCQMAFFLVLAFLIFAGVVTAFVTACQKGFIKLSTAGISGGLWLIGSLTAIWLKFPAPTGLQEMLTFSLYIFFLSLFALAFAPFATIPLALSWNRHR
>NZ_CP043931.1|WP_002649429.1|324234_325977_+|hypothetical-protein
MSSIFYATTKQFCKRAWFGAVLAVGALVMGPLLIVLILKFNGLQSDQMEQNYFDFHFAYLGASWVFFLGVCLHAFSGSEKYCLGLPVSSASIATWLMLAMAGFVVVLQLLTNGLYRLLFFDEHWLTNYWPLLGPLLFMVTLILVGHCLFWSVHAPSFTKTFLGGALMIGMLAWFVSRYYPNGFKSDIVPWNRVTLGEFVTMQLTCLAAWYQGTRAFAEVRAGTAVPSPAWERMKVWWNALLTGAIPEQSVVPFSPRSSLARLHWRESCQQSVIVGGGVFGLLSLMFNLLIGTRLNSEPTALRDVLEGFVAMSTILNLAAAVTAGAILGLGICRTGRTEMKRCLAMAPLTDPDFNATLFANMVKVLGWSILIIQSALLLSLIVTAVLYEVDTLSVLQVTGFLGNGSNSLSDMLLYLFGENGFLCHTLVTLIGFWIIAANIVSVLWTGRTWFIVSAIGVCFGGLFFYSMMISLLEAFFPRQYLAELVIISMLLILYFLILGGTLVAYLTARRRQLISKTRFLGAGLLWSFAVMGVLVTLLSMAPHYPFRTMCGEFCVFSVLGALVLAPFATIPLALSWNRHR
>NZ_CP043931.1|WP_149303495.1|322451_324152_+|EscU/YscU/HrcU-family-type-III-secretion-system-export-apparatus-switch-protein
MSSAFLMTTRNFCKRARLGASLAVGALVLCPLVSRIIMQVQGLRFEHLEQNVFDYHFAYLGVSYIFFIGVCLQALTGSEKFCLGLPVSSTSIATWMMLSMVGLVVALQLVTNGLYRVLFFDDRWLADYWPLLGPLLFMVTLILVGHAVYWSLHAPSLTKCIFWSAVVVALFWWFISRYFPNGYNEEIVPWRTVTLGEFILMQSLGVAAWYQGTRAFAHVRNGTALPSPQWEQLQVWWKGLLTGSIPEQPIVPLSRKAALARLHWRDSCQRAALLAGVGFGLTMLVINVLVIANFDPSRTNQNNFSQLVEVFFISSMFFGLVAAIIVAVLMGEGTTGSGRTEMKQFLAKAPLVDRDLNSTLFRNLLKTLGLTFMGIVVALTLSLIIAGIWHGAEVFQVLLSPVIRGGSSILPVFLLVIGFWVIAANMISVFWTGRSWFYFMAIGVFFGGIVFYIILMNLGDTLFRNSMLYHYMTIVLLLLPPLLICAGTFAAYMVACRRKLISQTGSIVALVLWMCSVTGVLIWMLERSQYYHGVVWGLLLIYATLAALVLAPFATIPLALSWNRHR
>NZ_CP043931.1|WP_002649427.1|320687_322379_+|hypothetical-protein
MTHLLFVVTKTFTKRAWLAAVLAVCLLVLGPLSLRELIYLLEGPTDSGSVNPFNFHFAFLATSWVTFIAVCLQALQGSQQMIRGLPISSARIASGLMFSSVGVVVLLSLVTNGLYRLVFFDEHWLADYWPVLGPLLFLGTLVMVGYHCFWSMHAPGFLKVAGWGMAFGLLFFWFVARYYPNGFARGIVPWSYVTLTEFVTLQLVSLVAWLGGVRAFANIRNGAATPTPQWEQAQLWWTALITGRIPERLSVPLSRRMTLARLHWSGSCQRAVIVGGILFSVAVLIVNLASVAMYDSSSPELNNLLELSGTFQITTLVLSGIAAIGVVIMLAGSLAGTGNTEMNRFLAMTPLSDRELSATMFGNMAKTILFVVVLIQLALLLSYAGFLMIQGTEIFHSTYDLNDWLRQNLIYSSVAMIGFWILAANLLSLCWTGRQWLCNTVVGVVIVGNIAYVIIEQLLLASGSYQAVQALGTIIFLVYSLVIISATIGAYLDASKRCLIQKRTRQVALYFSLTGLVLFELWMSQQPTMPDNWIGFLGLTVLLALIFAPFATIPLAISWNRHR
>NZ_CP043931.1|WP_002649426.1|318968_320633_+|hypothetical-protein
MSSAFVMTTRLIWKRAWPQALCCVVAFVLYSYVVLKVIAVAEEFEGRVHIDIFKFGFLFAFYMLLSSFAFLGISVAMTIGFQKYFLRLPIPSRTIASGMMFTAVTLFLSMQLLTNGFYRLLFFDQNWLSDYWPLVGTLLFLVTFTLVGYAVFWLLQAPSLTRLCTSVSFIAGMLFWFLSRFYPDGFSGAVVPWTQVTLSEFGTMLVVSVGAWYLGTIAFAQIRSGTAVPSPAWEILHQRWKVLAVGASSERVTDPHSQTAIATLKQVHWRNSCRSGVLIGFGLAGVAFCCNLAAFFIWAEPGADLGPMTYLPALFLTGLFLQFAVGALMIKIGGTLTFKGKQQMKDYWGTVPLIDRELAAALMENILKAGMLVLLAIVPVGLGGSYLLYALIQGQGVVSSDWQFLVEHQQVADAIYLIVFGMLFYWSTMLNFTAVGWFPRPCFGWWVVLSLAAVYFLSLPASGLPLLRAPVFLLDACLIWGITVLAFLHAYRSSLIGGKTIWRAALFYLLLCIAFWNYWDSDLFFDRVLLSALLVFTVLPFATIPLAVSWNRHR
>NZ_CP043931.1|WP_002649425.1|317213_318950_+|hypothetical-protein
MIHQFFVVSKTFTKRAWLAAVLAVCVLVLVPLVFRGLMSIKELGTYGISTDPFQYHFAFLGLSWIFFIAICVHALQGCENIVVRLPVSSTAIFSGLILLTVGLVLILNLVTNGLYRFFFFDQNWLSDYWPLLGPLLFLMTLVLVGQFLFWSRFAPSVTGSLFCISFVAALCWWFASRYFPNGFQKPVAPWNHVTLADWFTLLVVNSVAWYQGTRAFEKVRSGTAVPSPQWSRLRDCWNALLSGTLINRRVEFGSQHRSLVLLHWCDSCRPAVVIGGLYCSVAGVLLSFLLFKLSYLPGGQTAAFWSYIQSISVVTSSLFLLASLLIGFLLGDGIHRPGRIELKRYLSAVPLSDQDFSGILMRNLVKTVCIVWSCLMLGCLLSHIIVIHYFDFTASPLNMLYLEAYVSATSENLVPFLFLSAMILWGVSSTMVSIFWTGRTWFYLMVLSLFGGLCFALILISACIQSEAITGLLYGLTMTLASTILGGTVAAYLVAYRKKLITATGVLMAVLFLLTAVWFCSSLTGDEYHSVFYRIWNSNFFFRALGINSMRFLVFVVLTSLVTPFATIPLAVSWNRHR
>NZ_CP043931.1|WP_002649424.1|316303_317209_+|ABC-transporter-ATP-binding-protein
MSEHVIEVNNLSRHFGKKQALSDVSLSVPEGCVFGLVGENGAGKTTLLKHVLGFLKPQQGSVRVFGLDPVADPPGVLGRIGHLSENRDLPAWMTVRELIEFTRAFYPKWDPVYAEELRMMFELSLNQKVPTLSRGQLARAGLLVALAHRPPLLVLDEPSSGLDPVVRKDILDAIIRTVVDEGRTVLFSSHLLDEVQRVSDRIAILDQGKLLLTSPLDEVLVSHYQLTIRFLEPQPFFPQLTGALMWSGSGREWKIVCNGQKQELETELEQLEAEILDQTAPTLEEIFVARMKSAQRASAQE
>NZ_CP043931.1|WP_002649423.1|315908_316307_+|GntR-family-transcriptional-regulator
MQIQLSEADGTPYYQQVVNQVKFLVASGRLEAHEQLPSVRGLAQQLTITPNTVARAYRELEAEGVVISKRGAGVFISNGVSPLSNKEKRRILNERMDALLTESRQLGVDEETLLKLLRQRSQKFDSHQEVEK
>NZ_CP043931.1|WP_002649421.1|314215_315685_-|sulfatase
MIFTGRRRSPRVVVLLLIFCSALGLEAEAVEKPNVLFIGTDDLRCDLACYGHPLVKTPNLDKLATRGVLFKRAYCQQALCNPSRASLMTGRRPDTLEIWDLPTHFREADPNIVTLPQLFKQQGYFTQNIGKIFHNWRQKIQGDPASWSVPAVMHFARHDDDQPMLNDNRELPVNLAKAPRSESRDVPDSAYFDGRIGDLAVKALQDLKQKQQPFFLAVGFWKPHLPFNPPKKYWDLYDDSPITVPDNPQPPKNVPDVALHDSREILRAVKGKLTDAQIIELRTGYLAGISYLDAQLGKVLAELDRLGLREKTIIVFWSDHGFHLGEHGLWCKTSNFENDARVPLMISVPHMKTAGKTSDALVELLDMYPTLVELCGLDSPGKLEGTSLVPVLKDPTQSVKPAAFTQHPRPAYYRKQPENMGVSVRTPRYRYTEWRNFKTGKVIARELYDHTSDPEENTNIINEPTDRADFQAAVKLLEAQFPRKKHKLQ
>NZ_CP043931.1|WP_002649433.1|330422_330950_+|peroxiredoxin
MTVQVMQPAPDFALQGYDRASDSFKDYKLEDFKGKWVCLFFYPLDFTFVCPTELIAFNESLGEFESRNCQVLTASTDSKYSHKGWCDADPQLGGLKYPMLADGTHKLSRDYGVLKEDAGIALRGIFLIDPTGVCSWLAIHGLSVGRNVEEVLRVLDALQTGENVPCNWKKGEKTL
>NZ_CP043931.1|WP_044240375.1|331028_331787_-|SDR-family-oxidoreductase
MDESMKQVAIVTGGSRGIGAATARQAAQKGYAVCVNYRSDEKSAEAVVSQIQDAGGTAIAVQADVSQEADVERLFKTTDEQLGTVTALVNNAGILEQQMPVTEMDIARWQRIFATNVFGSFLCARAAIQRMSTFNGGPGGAIVNVSSLAARAGSPFEYVDYAASKGAIDTFTTGLSKEVAEAGIRVNAVRPGFIDTEMHASGGEPNRIERVKANVPLKRGGTAEEVAYAILWLLSDEAGYTTGGFIDIAGGR
>NZ_CP043931.1|WP_081459538.1|332228_333080_+|ThuA-domain-containing-protein
MLENSGKFTVEVSTTPPGLPRKARKPANKKLTPEQEKQFAEYLKAWEAEVARLQKENPALWKKWRPDFGKYDVIVSNYNGESWPEEVKQSFEKYVSEGGSFVVVHAADNAFPDWPAYNEMIAVGGWGGRDEKSGPMLRLREGEWIEDTSAGRGGTHGTRIPVVVKVRQPEHPIVKGLPQEWMHPADEVYGKLRGPAKNVDILATAYSEPEQRGTGEHEPIMMTIDYGKGRVFHTTLGHDVTALQGTGFQITLQRGTEWAATGEVTQPLPKVKWNDHEPTVQEP
>NZ_CP043931.1|WP_002647352.1|333111_333876_-|TerC-family-protein
MFEWLASPEAWIALATLASLEIVLGIDNIIFISILVGRLPEKERDLARSLGLGLAMVARLILLFSISWVMGLTEPWFSVFAWEFSGRDLILVGGGLFLLAKATHEIHNSLEGGAHEATASNAAQASFGSILVQIGVLDIVFSLDSVITAVGLSDHVSLMAVAIILSVLVMLFAARPIGDFVDDHPTIKILALSFLIMVGVTLMVEGFGVHVPKGYIYFAMAFSVAVEMLNLRMRKNQVKPVQLHKPISESDASE
>NZ_CP043931.1|WP_002647353.1|334003_334462_-|hypothetical-protein
MQIGTLLLWFLVVRCLNGSSAWRCLRIEDFRERRSPVKAICCDTGVKLADSLPLQSDVAPKGVDPQVLELLIGNRWQRWLIPGCSTKGLLWGSVAQVLNHPLLVELDTRATQFNAVSRIATARQDIFIEPFLCSGSGTVKGSVSQPMLRFFR
>NZ_CP043931.1|WP_002647354.1|334876_339556_+|nuclease
MFSFPWLTVLQRQYRTRFRRSARARLSRNRYKCAPRISSAPPHRTIEVLEDRTLLTAFTVVNTNDSGAGSLRAAIEAANAGGGADTISFDSALAGQTIVLTDELLISDDLTITGLGADQLTIDGNGDSRIFNLNNGIADEAIIVEITGLTLTNGFADSGAAIISYESLSLSEMVFSDNIGSSSGGAIYSDDWHLSISDSEFLRNTSRSGGAIYSQSVFLNVDRVTFTDNTVTGNRYGTGGAITNIAGSMWVTNSFFSQNTASRLGGAIHNSQYSSAQISNTVFLQNRAQSGGGISSLEAFLNVAESTFTENQATENGGAVFVNVYESVVIGSQATISGSTFSMNSAGDSGGGIANYYGTLIVEHSFLHANKSLDIGGGIDNRGTLTLLSSTLSENTADSFGGAISNIQEGTATIFNSTLSGNTTLFLGGGLYSVTSSPVTIINSTITGNSAVTSGGGLYVQGSKPQVSNTIIAGNLANTSAQIFGAVTGVKNIFQESVENLIDPVLRFNGGATPTHALLAGSAAIDAGRNNAATQVGLNTDQRGESYARINSGTVDIGAYEFNGYTLVVDTLSDEDDGNYATGQLSLREAIRLANESPFTETIVFDESLSGHTIIFSQEIAITDDLKIIGLGRDQLTLDGNGDSRIFNISDGVQQTRILVEISGLTLTNGYAENGGAISCLENLSIVDSTITGNTALENGGGIDSDFGIMTISNSSFTANQASRGGGISSDAGLPNVFSSVFNISSSIFAENIASDKGGGLYVSAYGMEIYDSDFTRNSAESGGGIFIQWAFNKPLIYNCRFTDNTVLRSGGGIHNATSGLRVYYSSFTGNAATGSPYWGGGGGLYNSGYSVQIWGSIFSSNTARSEGGGVYLSGEADIGYTQFSGNSALYGGGLHYSGNTLSIYDSSFIENVALENGGGINHQGLELELESIRFIGNTAAEFGGGLFSQGDLLVQRSLFTENTTGTFGGAVYANSFGTTTIYNTTLSGNTAFDQGGGFYSRSNYPVTIINCTIVGNTATNKGGGIAIYNIKGKLPSNMVSPMVTNTIVAGNTAASDSQVSGPFFSDSNIIQDSIQGLLDPVLRDHGGRTMEHALLPGSAAINAGNTSIVWLTGLHIDQRSNAEIPRVVEWIVDIGAFEYQGPFTYFDLRVVETETPVAGNGETESIPLGLSVIDEWQPYWLEIWVSSSTLESGIFSVSLNFNYNTAITTATRFEFGSAFTLNQMGTINDQLGMITGLSAESSLTDVGDDQYVLFARIRFESTPEDGIDLDSTRPFLTVAGTEFSIDQPEIRFVGGAESEEIIYALSDFQIQANPFDLNDDERINFRDLQIFMNAYGSQAATQNNNLSQFIDYNQNGRVDLNDLILLAMKYGTTKNETESSTVPVNGDQLLIVEAPAISTQVKTRTVTQNAAETVLESVVEQISPPLTSDQRETLEAVNIEVVDLAGDTLGRAVPGTIYIDVNAAGFGWFVDATPTDNSEFSSASELSLIALPDSEAAGHVDLWTVILHELGHLLGYEHAEEDVMQESLLPGERHLADWNDNTDQFFMEFPAESVLTSF
>NZ_CP043931.1|WP_149303493.1|339734_348026_+|hypothetical-protein
MTRQLIGTEFPQYNRIVLNMFIQQWLTSLQNQLRIRSTRPRRGRHSRNQRLKTPSAQALISRNVVESLEDRTLLTVFTVLNTDDSGAGSLRDAIEAANANVGADTITFDASLALAGKTIVLTDELLISDDLTITGLGANLLTLDGNNNTRIFNIDDDSSSSTITVEISGLTLTNGNSNTVDTELADNGGAIFSTENLTIENCIFTGNTAGSGGAIYDDASSLTVRGSQFIGNTAEESDGGAIYHKETFPYPEDGERLLIENSQFIGNHALFSGGAVLLRDGICIVNGSTFTENTAEFPGGALRNIFGDLTVNDSSFIENHTDFSGGAIANGGTLFVSGSTFDRNTADVNGGGIYSQGAESVTIHNSTFSGNSSVFDGGGIFALGSKPVTVINSTIVGNVATGSGISNGGGIYLFSTDPTLIMNTIIAGNQADSGQQIAGDFTGTANIIQESIAGLLDAELKDNGGPTKTHALLSDSAAINAGDNIAATNAGLTTDQRGTGFSRIVSGIIDIGAFESPVAVPIDLIVSTTSDVVDGNYSAGQLSLREAIALANTTSGADTISFDAALAGQTITLTDELLILDDLTITGLGADQLTISGDNNTRIFKIDDGFSVTKITVEIEGLTLTNGNSNESGTSTTGYGGAILNQGYLTVKNSTLRGNRARLGGGAIYSKYGSLTIENSFITENTGVIHGGGGVYVAGSGGTDLVVRESTFSFNTTGLRGGAIFISAGNSSILNSTFSVNTAVDSGGGVYNNSSGSMTIDASTFVKNVTSGNGGAISNSGELLVANSTISENSALDLGAGIYSSTTATFEIVNSTIVLNYTRSALSRGAAIYGSNSNSFSITNSIIAENSSGQSVQISGLYEDQNNIILDSIDGLIDPVLRDNGGETETHALLPGSAAINAGDNSFSTHAGLISDQRGAGFPRVFDETVDVGAVEFQTAYLLVDTTSDLNDGDYSAGNLSLREAIELANAFSAVDTISFSNALAGQTITLSDELLITDDVTIIGLGADQLTLDGNGNSRIFTIDDGSSATEIAVSISGLTLTNGSDDNGGAILNRENLTLQDSLLTGNTATLDGGGIYHADATLTISNTAFTLNHSANNGGALANSAEMHVQNSTLSGNSTLLLGGGIYSGSTATLEVLNSTIVLNEATSDVSMGGAIYSSATNPFEIKNSIIAGNTAAGSPQIAGGYNASFSIVQDDITGLIDPVLQDNGGSTQTHALLSDSAAIDAGDNSLAETAGLVTDQRGNGFPRIFNEAIDIGAVEFYESDFVVDTISDLDDGDYSAGNLSLREAIQLANAYSTADTILFDESLAGQTIYLTSELLITADLTIVGLGVDQLTLDAGNNSRVFHINDGDDTKTITVEIDGLTLANGSTLSTGGAILTHEDLIVRNSTLTGNTARLGGGAIYSTLAGLTIEHSLITGNASQFQGGGGVMYFRSGGTGFTVNESTFSHNTTDGAGAAVYFFEGDASVRNSTFDENTAEENGGAIQNNYSGFMTVDSSTFYKNRSNYNGGALANDNELFLVNSTLSENSADYLGGGIYTYRNTTLEIVNSTIVMNHATSYRSSGGGIYSTKPNVIHLANTIVAGNTDINNVQIDSGYTETASMITDSLTGLIDPVLRDNGGPTKTHALLTGSAALNAGDNTAASNAGLTTDQRGTGFTRILDDIVDIGAFEGYVNNFLVDTISDLDDGDYSVGNLSLREAIKLANAASTTDTIFFDASLAGQTITLGSELTITDALIMTGLGADQLTISGNNNTRIFNINNGQAGTFIDVEISGLTLTKGSARQGGAIYNYENISLTDTLITENSASNEGAAIYSGQGSVTMSGSRLSANIADRGAGIFAINSILTLDTSTFSGNTVTRDGAAIYNIFYIPYPELNPSTITECTFVENTAAGNGGGVYNSGGIINVSDSTFSEHQAVLGGGIYSKSNGHSGNISIINSTFSDNTEVESGGGIYADGIGLSVEGSHFTGNAAIGESTTGRGGGIYSINGPLTITASDFTSNTALIGGGVYSGTDSNLSVSDSTFNQNQARTGGGIYNNRSAMTIHGSSFTGNQALIDPENPSVSSEGGALFHSSQLATPQGENDAFISNSVFTDNYSGTRAAGIKLSYSFMTVTQSVFTGNSVQQSGGGIHNTLGYLTVQQSTFSGNTSDTNGAAINSTGTLIISESTIADNSAEYFGAGVYVSTAGTTTISNSTLSGNQSQSGGGAIYSNSSQPLTLINSTVTGNSSYNGGGVRTTNSISYFVNTIIAGNTATFDAQVSGSFTGSYNIIQDSIAGLLDPVLRDNGGPTKTHALLPGSVAIDVGDNAAATAADLITDQRGEGFSRIIGGTVDIGAFEVQAPFAQIDLRIVDSKTSTAANGEVSELPQNREWIDEWGGYWLEIWISSPLAISQGIGSVNLNLNYNTAVTTATAIEYGAAFTIGQAGTINDLTGVIENLSAGTSLTDAGDDQPVLFARIRFESTTADAVDLDFEGQTLNPQSPDILVDHSEILFSGTAVSEEVHGSAPETAIYANPFDLNDDDLVNYRDLIQFIRVFGAIPGLSHASHAWAADYNQNGRVDFPDLLAMVYNFGKSKDGAFPIDYPVNFPDAWNQLLTVESQLPPQENANSVTQATAENVLESAKEELSPQLNSEQQQILSDVDVQVVDLAAGTLGRAVPGTIYIDVNAAGYGWFVDATPTDNSEFSSSSELSLIALPDSDAAGHVDLWTVILHELGHLLGYEHADEGVMQESLSVGERHLADWNDDTDDFFIELTQGTELTDF
>NZ_CP043931.1|WP_002647358.1|348117_352740_+|nuclease
MDLITSRSLTGFIYMFRSLWLTTLNRRLRNQCSRSRYSRRHQHHGDRTPSAQALVSRKAVVESLEDRTLLTAFTVVNTDDSGAGSLRDAIEQANASAGADSISFDAALAGETIVLTTELQITDDLTITGLGSDQLTLDGNSDSRIFNINDGSFGTLLTVEIRGLALTNGFSDNGGAISNYEDLTVKDCLFSENDVSSVQIQSAGFNNGGAIKNVAGTLEVSNTTFSNNLAVDGGAIYNSTGTVNVMNSMFSENMATTTQGQGGGIYGIYGSVAITECSFLSNSASGYGGGIGTLYGTLSVTDSFFSNNSAGPHSSGSAIYNDGQMTVTRSVFSENSEKSAITNSTTNGTNVVISDCDISENDVSTGAIYNLNGSMLIIDSRFTGNNSVGGGIANLAKLTIVNSTISANFASGNGSGIDNSGVLSIINSTISGNGSNTLRGGGIYNSGVLDIVNSTLTANRASYGGGIYNDSYGTLTVSNTIIAGNTVVHEGAQVSGSFTSNASIIQDSIEGLIDPVLKDNGGLTQTHALLPGSAAINAGTNNIAIDAELTTDQRGAGFARIIYGIVDIGAFEATDTGPLHFLVDSATDTDDGDYSTGNLSLREAIKLSNESATTDTITFDASLFDQTLMLFNELVITDDVTIIGHGVEHLTLSGDGTRRLFRIDDENAEASISVELSGFTLTNGFANYSSGGAIHSLETLSISDVVFADNQASVLNGPLYGGNYGGAIYSGGELTVTNSTFVRNSADRYGGAIYSTDGLLTITGCDFSENQTSYAGGAIVAQNGDLTVSASTFTQNSSDTLGGGIYITQGVLTVSKSVFTENSSVTGGAIYHQISSTFPPVFTELSITDCTFQGNTTTSSAGAVYYSSALTFYSAYHTAYIENSHFSENSGSSGGALYLSGKNVLITDSTFFKNSASLNGGGISSYCDNLTVQNSLFEKNSSQAWGGGIYSKRSLVLQNSTLSGNTALVVGGGIAFDHMNYPWEIINSTLTGNAAARNGGGIYVMNSLGGTITNSIVAGNTAASAPQVLYYVTKTNSIVQDSVAGLLDPVLRDNGGVTKTHALLPGSAAINGGDNNALNDTNLNIVNRRSITQDPRGEGYERIVDETIDIGAFEVQHTFAEVELRIVDEKTTTQSNGEQTTLPDNLTWIDEWTGYWLEIWISTPAATDLGVLSAAMNLSYNTAIATAVSIEFGPGFTINQTGIINDLTGMIENLSAETRLTDVGDDQRVLFARIRFESTDSDGIDLDLAGQLMIPQSPGFTVHQTEVQVVGNIATEEVQGPAPETLVFANPYDLNDDDKIDYRDLLLFINVFNSDPRETNSGYAWFADLDQNHNVNYRDLISFVSNYGRNKTNQSTVNYPQGFPENRNKHLTVAPKLLPQLNARPVEQASAETMLSSVVESLDPQLTAAQNAKLAQVDIEIVDLPEGVLSNTVHGTIYIDVNAAGYGWFVDDTPDDHSEFYATGPYTLVSVPYATSNVLGKIDLWTVILHELGHLLGYDHADDGAMQESLAPSERRLMDWEAETDAFFSTLTDDAEQSVS
>NZ_CP043931.1|WP_044238713.1|352896_354390_+|sulfatase
MLSLSSVSAAERPNILLILVDDLKPAFGCYGDPVARTPNIDSLAARGMRFDLAYCNQAVCAPSRFTLMLGSHSTSTGLYGLGSQLRQIVPDAVTLPQYFAQHGGYRTESLGKVFHIGHGNHGDPRSFSVPHFHDKVIEYLEPASTEGGKLTREEAYFTNQQLDRIKSLPRGAAYESPDVADIKYADGRVAAETMLRLKAAQQRRKQEGTPFFIVAGFARPHLPFSAPQKYWDLYDPSQLPLPQFEELPANAPPVAGKRGGEITNYSPVPVERNAQFSEELKRQLIHGYYASMSFVDAQIGKVLTELDQLKLTDETIVVLWGDHGFHLGDLGIWTKHTNYEQANRIPLLIAAPGVTRPGSSTKQLAESVDLFPTLAELAGLPAPTVPQPIDGVSLVPVLKNPEARVRDHAYHAYPKQKLGRAIRTERYRLVEWRPSNNPTAPAVYELYDYQTDPLETRNLAADHPDVIKTLKQKLANYPRPRPRNQRPVKKKAAPRSK
>NZ_CP043931.1|WP_002647360.1|354417_356259_-|M48-family-metalloprotease
MSHPHEDFSRLGFAKTFFLPALLIFLIPTISLILFIYIQGAYDREGRDAALQQIRADQSLTAEQRANAEELFSNVPFSQLITIPGNEDMVSPQAAFDYTTFRWAIRFSLFSIIGGIVVILLSAFCVVASLRSQWIQYVSLSVSWHVLRIFGAAQVLIQGVLLFALSFWITAFFLERYVPKLMVIVGILALVAIAAVIKSMFMKLNNETVVEGTVIERDASPALWQELSAICAKVDTETPDQVIAGIDDNFFVTEQSLTVGEKNYYGRSLFVSLSLLKQLNGREADAVLAHEMAHFSGNDTLYSQKISPLLVRYDNYLQGLYEGGVSLPVFYFMNCFRALYEVSLKRLSRAREFRADRIATEVTSPRDMAGALLKIIAYSSYRVKVEQDIFQKEEVLENANVSQEIAQGFDNYAGSFMSTPDISHLRTSHPFDTHPSLEDRMKAVGCSLESPDSQVMLSEPGDGQWFQKIDGAEQLEDEQWKEYEERFRAYHEETLPYRFLPETDYELAIVLKAFPEVQLTGEEGLLTIDHTGIKHHPWESPVQFSDIQSCQMDDKGRLNFTSTGGAPSKINLKKFKDSDQQKVIEAVERYYSRYLAAKEYQEHVKQPGSTDDE

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Crispr_ID: NZ_CP043931_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043931_2

782894-783089

Orphan

Consensus_repeat	Method
AGTTTGACATCGCTGTCACTGCC	CRISPRCasFinder
CCACCAGTTTGACATCGCTGTCGCTGCCCAGGTCGA	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP043931_2

>merge|NZ_CP043931|2|782894-783089|CRISPRCasFinder,PILER-CR
AGCGCCACATCACTGTCGCTGCCCAGGTCGAAGTCTTCTCCAATCAGAGCGACGTCACTTTCGCTGCCCATCGGGCTGGAATCGTCGGCGACGAGTTTGACATCGCTGTCACTGCCAGATTCCAGATCCAGTATTTCAAAGTCTGGTTCTGAGTCACCTTCCACCAGTTTGACATCGCTGTCGCTGCCCAGGTCGA

>NZ_CP043931|2|2|782894-783081|CRISPRCasFinder
AGCGCCACATCACTGTCGCTGCC	CAGGTCGAAGTCTTCTCCAATC
AGAGCGACGTCACTTTCGCTGCC	CATCGGGCTGGAATCGTCGGCGACG
AGTTTGACATCGCTGTCACTGCC	AGATTCCAGATCCAGTATTTCAAAGTCTGGTTCTGAGTCACCTTCCACC
AGTTTGACATCGCTGTCGCTGCC

>NZ_CP043931|2|1|782900-783089|PILER-CR
ACATCACTGTCGCTGCCCAGGTCGAAGTCTTCTCCA	ATCAGAGCGACGTCACTTTCGCTGCCCATCGGGCTGGAATCGTCGGCGACGAGTTTG
ACATCGCTGTCACTGCCAGATTCCAGATCCAGTATT	TCAAAGTCTGGTTCTGAGTCACCTTCCACCAGTTTGACATCGCT
GTCGCTGCCCAGGTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043931.1\|WP_002648904.1\|785525_786761_+\|DUF2088-domain-containing-protein	unknown	unknown	gnl\|CDD\|370728
NZ_CP043931.1\|WP_002648894.1\|775526_776525_-\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP043931.1\|WP_002648897.1\|778896_779424_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274379
NZ_CP043931.1\|WP_081459609.1\|792573_793698_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP043931.1\|WP_002648908.1\|790093_790930_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP043931.1\|WP_002648899.1\|780771_781830_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002648912.1\|793703_795932_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|224054
NZ_CP043931.1\|WP_044239974.1\|774910_775336_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378467
NZ_CP043931.1\|WP_002648891.1\|772219_773041_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP043931.1\|WP_002648907.1\|789372_789996_+\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_CP043931.1\|WP_002648896.1\|777529_778897_-\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377406
NZ_CP043931.1\|WP_002648895.1\|776552_777416_-\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP043931.1\|WP_002648906.1\|787935_789339_+\|sulfatase	unknown	unknown	gnl\|CDD\|293763
NZ_CP043931.1\|WP_002648902.1\|784018_784573_-\|phage-shock-protein-A	unknown	unknown	gnl\|CDD\|274372
NZ_CP043931.1\|WP_052301285.1\|771405_771720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP043931.1\|WP_002648898.1\|779864_780689_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|316372
NZ_CP043931.1\|WP_081459608.1\|791420_792017_-\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP043931.1\|WP_002648905.1\|786777_787761_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP043931.1\|WP_149303886.1\|773466_774810_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002648903.1\|784697_785285_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|183566

Protein	Function_ID	Function_description	E-value
NZ_CP043931.1\|WP_002648904.1\|785525_786761_+\|DUF2088-domain-containing-protein	gnl\|CDD\|370728	pfam09861, DUF2088, Domain of unknown function (DUF2088). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.60948e-17
NZ_CP043931.1\|WP_002648894.1\|775526_776525_-\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	2.97376e-60
NZ_CP043931.1\|WP_002648897.1\|778896_779424_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274379	TIGR02989, Sig-70_gvs1, RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are abundantly found in the species Rhodopirellula baltica (11), and Verrucomicrobium spinosum (16) and to a lesser extent in Gemmata obscuriglobus (2).	5.2172e-35
NZ_CP043931.1\|WP_081459609.1\|792573_793698_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.05853e-51
NZ_CP043931.1\|WP_002648908.1\|790093_790930_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	5.95128e-29
NZ_CP043931.1\|WP_002648912.1\|793703_795932_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.08537e-92
NZ_CP043931.1\|WP_044239974.1\|774910_775336_-\|hypothetical-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	0.00195589
NZ_CP043931.1\|WP_002648891.1\|772219_773041_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	3.98998e-33
NZ_CP043931.1\|WP_002648907.1\|789372_789996_+\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	3.43219e-42
NZ_CP043931.1\|WP_002648896.1\|777529_778897_-\|FecR-domain-containing-protein	gnl\|CDD\|377406	pfam04773, FecR, FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.	8.64034e-09
NZ_CP043931.1\|WP_002648895.1\|776552_777416_-\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	3.20072e-53
NZ_CP043931.1\|WP_002648906.1\|787935_789339_+\|sulfatase	gnl\|CDD\|293763	cd16144, ARS_like, uncharacterized arylsulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NZ_CP043931.1\|WP_002648898.1\|779864_780689_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|316372	pfam13847, Methyltransf_31, Methyltransferase domain. This family appears to have methyltransferase activity.	3.00817e-26
NZ_CP043931.1\|WP_052301285.1\|771405_771720_-\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	1.39632e-08
NZ_CP043931.1\|WP_002648902.1\|784018_784573_-\|phage-shock-protein-A	gnl\|CDD\|274372	TIGR02977, phage_shock_protein_A, phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	9.48908e-18
NZ_CP043931.1\|WP_081459608.1\|791420_792017_-\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	6.60497e-09
NZ_CP043931.1\|WP_002648905.1\|786777_787761_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.0749e-37
NZ_CP043931.1\|WP_002648903.1\|784697_785285_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|183566	PRK12513, PRK12513, RNA polymerase sigma factor; Provisional.	6.48789e-42

>NZ_CP043931.1|WP_002648899.1|780771_781830_-|hypothetical-protein
MYQKSLCLLVLLALVISSPLQAAERTLRYRDRKPQEYKLTARASKIDPRTKEHPEIDYVFEAKGKPQDVEHAVVDTRVKPRGKLVIWLMGYNSQLFDRLSSYGLHAIQVHYANRWFSKVCRENPVGETCRGNVRLEAATGEDYSDQVSIPHPDGMKERALQFVKWLAKENPQGQWNYYLTPDGKDLRWEDVIMAGSSHGSTTAARFAKHQKVSRVVMFCGPRDQLQNWQMLPSATPTNRYFGFSHVLDGGWTADHYCRSWELIGLNEFGPIVNVDKAKPPYGNTRRLITDFDVKNNTRRAHSSVVPGGNAGKNAQGQYIHEAVWRYLFTEPVDKVGKPVPLDPGCEKNQRDS
>NZ_CP043931.1|WP_002648898.1|779864_780689_+|class-I-SAM-dependent-methyltransferase
MRELMNRKTQYVIRGGVEGRERLRVLGRVMAESTGTLLDQINLTEGMTCLDVGCGGGDVTCELARRVAPVGRVVGVDIDETKLSIARQEAAEQGLTNIEFRLSDASEISATPEFDLVYSRFLLTHLKDPVSAVRSFLKQLRPTGFLVVEDIDFSGSFNYPESPAFQKFFDLFNTVVRHRGGDPNIGQRLPGILHDCGIQNLKVSVVQPTGLQGEVKQLNGLTMENIADAILEDDLATPGEIDEIVRELYDYAADPRTLSGVPRVIQVWGRLPFA
>NZ_CP043931.1|WP_002648897.1|778896_779424_-|sigma-70-family-RNA-polymerase-sigma-factor
MNEVILNNEFFQQLLKHQGQLHAYVLSLVGNTSDAHDLLQDVNQCLLEKQSSFTLGTNFLAWSRKVAFFKIQSYWRDQSRNRMLFDDELLNSMSETIECMPDLYNEQIEALKTCITHLPSDKQILMQQRYGQFLPLKQIAEYWGKSEKAIGVMLLRVRLRLQDCIQKSIAARSRI
>NZ_CP043931.1|WP_002648896.1|777529_778897_-|FecR-domain-containing-protein
MIRENSTSWEDPLPKLVALYFDNQLNERELKQLQTRLKSDPEARIFFVQFSALQTQLEWIHTDSSSPQEMTHLPGSIYSRKKNWNLILYVTCCVCLVLGGLLSMHLMTPVAHVFPEPGSVWSSGNITTEEKLLPGSRRHLLRGAIEIRFTSGSIVNLKAPAQFTVHNSNEIFLQAGKLVADVPESGHGFTVETQTGKIIDLGTSFSVNVGAELNTEIKVYRGKVQVAGSKETEPPREIRANEAVQIDPVSNLIQPGDYTSSDFIPLISRDYAVDQFSDNVIFQEQLPDQIAQGEFQVLERDGAIFLFPEKRDILLSENLPVSITQPGDYRAEEQIETETDFVSRGMKVDCYRIYYDPASNHRDMIRAEGVVHFHQPILGLITTKTRLLETDSVLNPLCAGGNCPPIQHQEVEARVAEDGTHQDILSLSEDRKTLKFILHTGTKYVDEFRVLVASP
>NZ_CP043931.1|WP_002648895.1|776552_777416_-|DUF1559-domain-containing-protein
MQIPRPAKRLRGFTLIELLVVIAIIAILIALLLPAVQQAREAARRSQCKNNLKQIGLALHNYHDTHRVFPSGVVSSNNLAWSTMVLPFIDQAPLYNHISSATDSFAEPWEDANYDGTLDDPIDEANTVIPALLCPSDTTGGRNSKIGNYGTSNYIVAHTASNAGETADVLASFYENSSRRMRDYTDGLSNTVQVVERTGQGTYKGSIWIGRRDGIDVFEIWTRIDRISNDDHYRPNGTIWAATSSLHVGGAHVLMGDGRVRFVSENISIETWAALGTINGGEVIGEF
>NZ_CP043931.1|WP_002648894.1|775526_776525_-|DUF1559-domain-containing-protein
MHIHRPAKRIRGFTLIELLVVIAIIAILIALLLPAVQQAREAARRSQCKNNLKQIGLAFQNYHDTFNMFPPGYVDERGSGGTLADNEGHWAWSTMILPYLDQAPLYNQMNPGPITPSTALNDAAIRTSMQQPLAAFRCPSDTGPALNGNAGQGIQSDGGTNYELPVSNYIASNNNRTLRQSRSSNGANGGSGATGAFWRDSNLRFRDITDGASNTILVGERSYKVGTVDFYAGTLYAAREFGGTNGPEQASGNQGLIAIFGGSTYSINPTNPSNVATRQAYSSQHTGGAHFGLGDGAVRFISENINLNTDDAVNSTLESLIGVADGQILGEF
>NZ_CP043931.1|WP_044239974.1|774910_775336_-|hypothetical-protein
MMLRILSLCLLNCFTCLIMSGCGNAGPELATVTGNVTLDGKPVPDARVDFSPQEGRASVGTTNAEGVYELQYSLEKEGAVIGSHNVKITTERATTGGEGNEPLVPGSKELLPSVYNSNSQLTAEVTSGENVIDFSLQSQPD
>NZ_CP043931.1|WP_149303886.1|773466_774810_+|hypothetical-protein
MIMACFGEQAQAGYLGAGRYKCCPTEACTSCGDYCAAKECSSTCYKTVVETVWEKQNYTCQKTVYDTVCEKVPVQYTKNVYKTCYRDECYTVCKPVYQTCYREVCYNVCRPVYKTCYKTVTCKRRRPVYNTCYKDVCYSVCKPVYNTCYRDVCYTVRRPICETHYRDVCCTIYKTNYKTCYRDVCRTICKPVHTWHDVEVCCGEWKTVTEHCPGPVVDKCVCEPGTWEYDCSSCCPIYKPGCCKTVKVQCPGTTICRRVWCPKKVTRKVCCTTYERECKTERVPYTVCERVPCTITKKVPYTCVRYECETRTKKVPYTTCQMVRECRTRKVPYTTCCWKEECVTKQVPYTTCTMVSECRTRKVPYTTCSYEQKTCTRKVPYTTCEQVCCTRYVTRTKCVPRTVCVTKTRCVPRQVCRKVPVPTCCPEPTCTAPAPKTCTAPAPTCSN
>NZ_CP043931.1|WP_002648891.1|772219_773041_-|sugar-phosphate-isomerase/epimerase
MKFGICQELFVGWDWEQQCDLIAEIGYTGIELAPFAFAERPSDISAEQRAFLRKTAEDRGLQIFGLHWLLAKTEGLHLTTADAAVRKKTASYLVELGELCADLGGDLMVFGSPFQRNIEEGMTREQAYANAAEVFRNCLPAIGERGVRICMEPLTTKETDFVNTCAEALELIDMVGADNFVLHQDVKAMLGAETESIPELIHKYDTRTGHFHVNDSNLLGPGMGETDYHPIFKALKESRYDGWISVEVFDYEPGCEHIARESFRYMKEVWESV
>NZ_CP043931.1|WP_052301285.1|771405_771720_-|hypothetical-protein
MARSQRQGSPRLTLKGGFAVAKKKAKKAAPKKAAPKKKAAPKKKAAPKKKAAPKKKAVKKKAAPKKKAAPKKAAKKAAPKKKAAAKKKAVKKKAAPKKKAAKKK
>NZ_CP043931.1|WP_002648902.1|784018_784573_-|phage-shock-protein-A
MSYFSRLTDIVTCNLTHLLNNAEDPVKEIEQIISEMKEGIAGANRSVKTASANEQAIQQELADYESQIFQWKEAAKNALGMGDETEARNSLVRKQEVEDLKAGLEQQHRAAVATCEHLTTTLHALEARLAEARRKQVELTEQTGLSETSAQSTSNTTDAESSLNPSRSEQIDSELAELKRELGQ
>NZ_CP043931.1|WP_002648903.1|784697_785285_-|sigma-70-family-RNA-polymerase-sigma-factor
MTEDDQLMIRIQSGELRAFDELVEKYQGPLIGFFFRNTRDSQISEDLSQETLLRVYNQSWDYLPQGRFRGWMYRVARNLMIDNIRRQSHDALIKAYTGKQADEDDSLNRLASEVVSPEEKANVKELALIVDELLATIPEDQRLTFTLHHYSELTLNEVAEVMETNLATAKSRLRLAREKLREKLTLMGVTGPQKK
>NZ_CP043931.1|WP_002648904.1|785525_786761_+|DUF2088-domain-containing-protein
MTETVNIELNYGFNGTFQCEIPSERLIHYHQAPAGIDDVAARMKQVLNSPLELPPLDLAVVPGDKITIAVDYQAPAAAEVINSVWDYFSDCGIEAGDVTILQTSSESSMLQEKLKAAVNSELQEQASWVIHAPDSKEEVGYLGTSAGGERIYLSRHLLEADFILPIEKVGFDPLIGYAGGGSSIYPGFSSQEAIIKSRGQSHRELTPAESRPLRQLIDEIGWMLGLQYSLQVIPAGGQSVSEIVFGSLEATFRKAKQLLDEYWKLEPEYKSEMIVIAVEDGPTGHQWNQLGSVLETARNLVAQDGRIVLLTQIDSALGEGLQILSRCHEPLDAIKPLRDSQPGDLLAATQMALTGDWALICLLSKVSSDEVEDLFVIPLEDEAEVQRLLQTDETVSVIASAQYAYGQLKQG
>NZ_CP043931.1|WP_002648905.1|786777_787761_-|Gfo/Idh/MocA-family-oxidoreductase
MKKIKVGQIGVGHPHAGGKMQAFRKSEEYEVVGVVEPDEKLRAYAASTGIYKDLPFLTQEQLLNIDGLQAVAVETQVADLLPTAETCIAAGKHIHLDKPAGLSLPHFKRILDQAAQKHLLLQMGYMYRYNPGVVLLRDLLQKGWLGAPFEVHTVISKKMDAASRKQLEPQPGGMMFELACHVIDLVVEILGRPDQVTAFAQHASDIDDTLQDNMLAVFSYPRALATVKTSCNEVQGFDRRHIVVCGSEGTFHLQPFGRPSASLTLAQAKGKYRKGQQEISFSGYTRYQDDVADMAKIIRREKDIDFSYQHDYDVQETVLKSASLPVT
>NZ_CP043931.1|WP_002648906.1|787935_789339_+|sulfatase
MLEGIPMLRTLVFCCHLSMLSQASAENQRPNIVLFFIDDLGWRDVGFMGSDFFETPHIDRLADESMKFTAAYSAAPNCAPSRACLMSGLYTPRHGVYTVGDPARGNDRYRKLIPAENNRVLDDRFTTIADRLSQAGYRCASVGKWHLGQSPLSQGFQVNIAGNQTGSPRGGYFSPYQNPQLSDGEQGEFLTDRLTTAACQFIKDNQGSPFFLYLTHYAVHTPLQAKKEDIAYFQSKPAGKLHQHATYAAMIRSMDQSIGRVLQTLREQQLDQNTIVVFTSDNGGYGPATSMLPLRGSKGMLYEGGIRVPLLIKWPGVTQPGSTTGEAVINVDLYPTFLEMTNIPVLESELLDGESLVPLLKDPQTRLESRSLFWHFPAYLQKYQGMQQRFRTTPVSVIRQGDWKLLEFFEDGHQELYNTRLDIGESKELSGSHPEKTQELSQALHRWQKQVKAAIPAELNPEYKPED
>NZ_CP043931.1|WP_002648907.1|789372_789996_+|MarC-family-protein
MEWDDIFRDFVYLWAVIDPIGSIPVFIAVTAGTSRMVQRKIAYQAIITAGLVLLLFIVGGQIMLDLLEIPLAAFQIAGGLVLFLFALTMIFGDSKPETEIEESTHINAHQNKAVFPLAIPSIASPGAMMAVVLITDNHRFHIGQQLISTLTMMTVLLITLGFLLLAGRIQKLIGDAGASVVSRIGGLILASVAVDSVLSGIKTYFGI
>NZ_CP043931.1|WP_002648908.1|790093_790930_-|OmpA-family-protein
MPILVRVCLLTAVSLFTISQSACQRGPNAQLRQSMYRSQQLYDQNSELAMQRDQFQQSANALQHERDQLAMRAQSLESNLNIANKRLDNLNAERSEMQQRYVSLMKKAKGQPSPLDGEATRRFQELADKYPDFEFDPITGVSKFHSDILFSSGSDNLKPAAQEILNQFAAIMNDGNAKRLNVLVVGHTDDKPISKASTQRQHRTNWHLSTNRANSVVLTLSKFGVKQERMGAAGYSMFQPVVPNQNDSARQKNRRVEIFVLAPDAVVAGWDPNPTLLN
>NZ_CP043931.1|WP_081459608.1|791420_792017_-|type-II-secretion-system-protein
MVSHLPSRRRGMRRGFTLIELMVAIATIAVLIALLLPEIQKAKDASLKSSQKDGPYWVYREYEYAGGPVISEISGTYKHSLQEILDMYAINLKKQQKQNELELEQIAQLEQMTDEDAVAIALKPVEPKTQRVPSWHKRHTDLGAQEISRKEKIAKTKRALKNFKFDLSQNTASLVARRNLVEAIEELKHDLKQLESQD
>NZ_CP043931.1|WP_081459609.1|792573_793698_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKKIAGLLVVGVVLIVSLVFSQNRHVPLRVSGFIEADDIRPGSRVGGRVKQVLIEEGQSVSQGDLLIELEPYDLLERRAEAIAGLAEVKAQHAELVAGFRTEEIDEAAAKVDQLKARLTLLINGPRQQEIDSAVAELHLADAEYRLAKAKQMRVETLFGQKSASTDELDTANTELQVAASRKEVKQKSLDLLKEGTRKEEIDEARAQLKQAEAALQLLRNGSRKEDIEQAAASVRKAEAFLQTIEDQIKELKIVAPLDGTIEAVTLQPGDLVGSNVPVVSILDWNALWVRCYVPENHLDIQVDQEVEVTIDSYPDKTFKGRVSFVSRQAEFVPRNVQTPEERSKQVFRIKVRITDKDKLLRPGMAADVWLHGKD
>NZ_CP043931.1|WP_002648912.1|793703_795932_+|ABC-transporter-ATP-binding-protein/permease
MTTVIKVDQLSREFGSLKAVDQVSFTVQRGAIFGLLGPNGSGKSTIIRMLCGVLEPTGGSAQVLGYDIVDDAEMIKRHIGYMSQSFSLYADLSVRENIEFYGRIYGLSPEKLEQRFQEIIELTSLQDRLDQLAGNLSGGWKQRLALGCALIHEPQVVFLDEPTAGIDPVARRDLWDLLFQLAGQGVTLFVTTHYMDEAERCSDVGYIYNSHLIVCGKPNELKQLPTVTPEGTARWEIETANPATLLTTFREMPGVRDATLFGQTIHVLADQSLSENDFTRQVPHEFGTVQVRHITPSLEDVFVTLSRAEELNHQGAAVPTTVTASQQRSEGEPLDHREQVALPAQTQSVKRPAAEQVTPGILAGFWAILVKEFSHVRREPSTLLFVFAVPVLQTLIFGFAIDTEIENIPTVIFNLDGRASSRELQDGFANTRTFRIVEHVYNHEDFRNAFESGRAKVGVTIPPDYSDRLLKGEQVSVQVLIDGSDSQVATTALNASNLLGFNLSTSMTRSFAENLNVVPARDADGQPALPVEIRPRLLYNPDLDSSYFFVPGLVGIILQLVTLFLTSFAIVRERELGTLEQLFVTPVSKSGLLLGKLAPYALIGFVETLIVLTLMVYFFGVPIHGNLWELLLLSLLFLVCGLGLGMLVSTIARTQLQAIQFAFLIMLPSVLLSGFMFPRSQMPLPIYLVTFIIPVTYFLEILRGIVLRGANLTDLLPYVLGLSLCCIAIIGFSLKRFQKQLS

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Crispr_ID: NZ_CP043931_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043931_3

3160724-3160803

Orphan

Consensus_repeat	Method
GGCGGGTGGCACCGTTGGCTTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043931_3

>merge|NZ_CP043931|3|3160724-3160803|CRISPRCasFinder
GGCGGGTGGCACCGTTGGCTTGCTATTAAGACCGGACACATGATACACAACCGTTCGGGCGGGTGGCACCGTTGGCTTGC

>NZ_CP043931|3|3|3160724-3160803|CRISPRCasFinder
GGCGGGTGGCACCGTTGGCTTGC	TATTAAGACCGGACACATGATACACAACCGTTCG
GGCGGGTGGCACCGTTGGCTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043931.1\|WP_002647450.1\|3171261_3171690_+\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP043931.1\|WP_149302986.1\|3162813_3163134_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002645283.1\|3149360_3149798_+\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_CP043931.1\|WP_081459426.1\|3147449_3149312_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_CP043931.1\|WP_002647449.1\|3170040_3171006_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP043931.1\|WP_149303779.1\|3166124_3167726_-\|exo-alpha-sialidase	unknown	unknown	gnl\|CDD\|271234
NZ_CP043931.1\|WP_002647442.1\|3161106_3162543_-\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293763
NZ_CP043931.1\|WP_081459540.1\|3163406_3165608_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP043931.1\|WP_002645285.1\|3152005_3152764_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043931.1\|WP_002647453.1\|3174248_3177464_+\|DUF1549-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872
NZ_CP043931.1\|WP_081459541.1\|3171989_3172601_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274379
NZ_CP043931.1\|WP_002645286.1\|3152889_3154314_-\|exo-alpha-sialidase	unknown	unknown	gnl\|CDD\|271234
NZ_CP043931.1\|WP_002647452.1\|3172593_3174228_+\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377406
NZ_CP043931.1\|WP_002645281.1\|3146087_3147386_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270306
NZ_CP043931.1\|WP_002645284.1\|3150048_3151521_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|365919
NZ_CP043931.1\|WP_002647448.1\|3168209_3169574_+\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP043931.1\|WP_002645287.1\|3154373_3155762_-\|DUF1552-domain-containing-protein	unknown	unknown	gnl\|CDD\|377875
NZ_CP043931.1\|WP_002647439.1\|3158357_3159695_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP043931.1\|WP_149302988.1\|3155855_3157778_-\|DUF1592-domain-containing-protein	unknown	unknown	gnl\|CDD\|377886
NZ_CP043931.1\|WP_002647440.1\|3159728_3160367_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043931.1\|WP_002647452.1\|3172593_3174228_+\|FecR-domain-containing-protein	gnl\|CDD\|377406	pfam04773, FecR, FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.	1.2951e-07
NZ_CP043931.1\|WP_002645283.1\|3149360_3149798_+\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.51272e-40
NZ_CP043931.1\|WP_081459426.1\|3147449_3149312_+\|HAMP-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	1.30948e-40
NZ_CP043931.1\|WP_002647449.1\|3170040_3171006_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	2.97481e-55
NZ_CP043931.1\|WP_002647442.1\|3161106_3162543_-\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293763	cd16144, ARS_like, uncharacterized arylsulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	5.21082e-111
NZ_CP043931.1\|WP_081459540.1\|3163406_3165608_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.14528e-21
NZ_CP043931.1\|WP_002647439.1\|3158357_3159695_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.17845e-28
NZ_CP043931.1\|WP_002647453.1\|3174248_3177464_+\|DUF1549-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	7.63003e-119
NZ_CP043931.1\|WP_081459541.1\|3171989_3172601_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274379	TIGR02989, Sig-70_gvs1, RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are abundantly found in the species Rhodopirellula baltica (11), and Verrucomicrobium spinosum (16) and to a lesser extent in Gemmata obscuriglobus (2).	5.00214e-38
NZ_CP043931.1\|WP_002645286.1\|3152889_3154314_-\|exo-alpha-sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	9.52519e-06
NZ_CP043931.1\|WP_002645281.1\|3146087_3147386_+\|extracellular-solute-binding-protein	gnl\|CDD\|270306	cd13588, PBP2_polyamine_1, The periplasmic-binding component of an uncharacterized ABC transporter involved in uptake of polyamines; contains the type 2 periplasmic binding fold. This group represents the periplasmic binding domain that functions as the primary high-affinity receptor of an uncharactertized ABC-type polyamine transport system. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.565e-24
NZ_CP043931.1\|WP_002645284.1\|3150048_3151521_-\|aldehyde-dehydrogenase	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NZ_CP043931.1\|WP_002647448.1\|3168209_3169574_+\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	1.94815e-85
NZ_CP043931.1\|WP_002647450.1\|3171261_3171690_+\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.0051158
NZ_CP043931.1\|WP_149303779.1\|3166124_3167726_-\|exo-alpha-sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	1.25771e-58
NZ_CP043931.1\|WP_149302988.1\|3155855_3157778_-\|DUF1592-domain-containing-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	3.56558e-56
NZ_CP043931.1\|WP_002645287.1\|3154373_3155762_-\|DUF1552-domain-containing-protein	gnl\|CDD\|377875	pfam07586, HXXSHH, Protein of unknown function (DUF1552). A family of proteins identified in Rhodopirellula baltica.	1.6446e-95

>NZ_CP043931.1|WP_002647440.1|3159728_3160367_+|hypothetical-protein
MQYFNLRRFAVLLVILSGTSTLLAADAELAKHITVPTDWKGEQISLPPSFAREMKFKGLEEARFSPGMFQEKSNTFFSYFFVFKIDPGSELTQKNIERELLTYYQGLSRTIFNSRKAKVDTSGFSCELKKVVPVDAQKIYPEGLTEYSATVKWIEPFVTQKPQTLHLIIQVWTDKTTKDGYLFACVSPQEMKAEIWQSMQNIRDSFYRSLQK
>NZ_CP043931.1|WP_002647439.1|3158357_3159695_+|Gfo/Idh/MocA-family-oxidoreductase
MTSTSDTTRRDFLKTSVAAAAATTFAAPAFVRGQNLNSQLQFAGIGTDGKGYSDIKLIASHDKVKCVAFCDVDLSRTKKVKPLAPEAPVFQDYKIMLDELGDKIDAVSVSTPDHTHAIISMDAMQRGKHVYCQKPLTRTVWEARQMRLQAKKSGVITRMGNQIHSHSAYRTAAKAIQDGVIGKVKAVHSYVGTTGHGRSGLLNKPANNEAVPKTLDWNLWISVAPMRPYGGNRVYHPFTWRDWQDFGSGAIGDFGCHLLDPVYTALKITGDPISVHSEHTGMNDEVWPAQETIKYVIPGTQYTAGSSLPITWYDGGRRPSDSIAKLLPGQSLPSGGSIFVGEKGNLILPHYRQPFVNIEGVNIEPVESLDHYHGWVDGCLSGKQPSDGFEYGGHLTEAVQLGNVAAFFPGETLEFDGKALKITNNSEANKYLTRDYRAGFEIASI
>NZ_CP043931.1|WP_149302988.1|3155855_3157778_-|DUF1592-domain-containing-protein
MSVLEARFVRGVIAGLVWGLWVCPQAGLAASKENKALAARKAEAEQFFSKQIKPFIKKYCIDCHQNRRPTEAGLSFDPALRSPGHAAFSEKWKKSAARVKAHDMPPEGLDQPSDKERQMFAKWMQQIKYLSPKDPGPFVIRRLTKTEYGNTLHDLLGVDPDIVASLPDEVSGEGYLNSLSPLQLEQYLAISEKVLNQVVAPEGKPPTAIQLELFGEPPTSETDAKSNARKLAKSLARSAYRRPPSAAEVDVLLKVFELGRQNDLSYQASCRLMLKAILVSPQFLFITPAREVETEKGIVPLDDYQLASRLSYLLWATMPDAELLTLADQGKLHELPVLKDQVTRMLMDPRSRALFDGFGAQWLKLGNLHTRTFDPKKFPQMTAALRSAMYDEARLFFESIVRENRSVSEFIDSDYTFLNGNLASIYGLENTVTGPEMRKVKLTNGNRGGILGMPGVLAATSFPNRTSPVNRGVWVLEQVLGDHVPAAPPDVPSLEKQDQKQIASLTLRERTELHRSEAVCANCHRLLDPIGFGLENFDAIGRWRDLDENGQAIDASGELPGGRNFSNPKELKAIIAQHNAKFSRNLVERLLAYALCRRLEGYDEIVIDGLMQKIAKDDYRIQTLITEVVTSYPFMHRRIE
>NZ_CP043931.1|WP_002645287.1|3154373_3155762_-|DUF1552-domain-containing-protein
MSNYKRINRRTCLKGLGATLALPLLDVMGWAEDSEKKTFQPPVRMGFMYMPHGVIMDQFWPKDPKTFLTSPPPALESLRPVLDQCLLMKGIAGVSNGPFRGAPHALELSTWLTAALPDPDKRDEISISISADQIAANSLGAFTALPSLELATMPQTWKENQAGLNEAYYSHCSFRSPTQAVPAETNPRNVLNRLFNKKEKGDGLSANGMSSLDRSMLDLVIGGARDLRRTLSKTDQRKLDQYLDSVRSVERRIAAIEIRQKEAALEKAGVRPNRSHKTDSPPIEIKIPEGDKRSEYMQVMCDLNVLAFQTDTTRVCTYIGSTPNGVSYPELGFNDQHHSQTHHNGEKKKVDKVAAITKFNIDQFAYMVNKMHSLKEGDGTLLDNCIMMWGSGLEDGDRHSRANLPFILAGRGGGAINTGRFLPDVKGNQGDLLTTLLTCAGIPLDRPVGIATKQIAEIPAQS
>NZ_CP043931.1|WP_002645286.1|3152889_3154314_-|exo-alpha-sialidase
MRITIRSLFSSLLLVIICTTNAVAQDSSKSNTEERPAPRIKLTMGEPHVIVRGIRPEEQLWGPYQFPRPYRLKDRFVVSVHVKNDDISNYGATALWFESRDQGVTWKEVDDSIAQECGLLLPSGDRVYLPPESGVDVSEYKQIPWNKYTPAYDFSKQAEEGTLPIPDGMTFWMGGTTINAFNADRLPPSMSKKEWTLYRIPAGQTKPVQEQADVDWPYLTRVVHVSRNGKKVLKSIFPRGNPKLGPDGAIWVSVFSGEGHLNPENGQYSPYYSAEIFRSEDNGKTFQRRSHLEYEANGHEFPYKSGGFSDSDFEFMPDGSIVWFLRSTWYSSTGKEWDPMYMTRSTDLGRTWSKPVKFDDVGILPRLCRLENGVTLLCYARPGTFVRAALNDSGTEWTEPLVVMTPGDRSGLANKPVADPTFHDWDGSCNNPEIVPLDENSALLFYSDFYYPDESGVKRKTILCRKIMVERQAD
>NZ_CP043931.1|WP_002645285.1|3152005_3152764_+|hypothetical-protein
MYRLSALLMFLLPALVQAAPHKIIHVVNPHHVSRAEYLADLRANSSLTDDQIDDRYREFLHDRERSQRGLILKLRVLIKKYRLKGIYLQGLSEKNHQATLDYLESLKQYEKTNTINESEFEKRKKDQNRLDLSELGAAGQLVITGELQTILPAEDAKAFEAVNSVKSDGSIKFVEKEEHERENAIVRNLMKADGVAVIVLSRDHNLADNLKELGFSCRYVITGSDPPVESNIDTFKNSIFKRSDKLTGNRLK
>NZ_CP043931.1|WP_002645284.1|3150048_3151521_-|aldehyde-dehydrogenase
MPAWPEKMYIDGKWVDGRSETNWTITNPATREPLAEIALANASDVDLAVTAARRAFDKGEWPRLDPLQRGRLLYKLAERIRESAEDLAMTDTLNIGKPIRDTLGFDIPCGADVIESYAGLPDKIAGHSYGGLPDNVTMQFREPMGVIAAIVPWNYPMTNAAIKLAPILACGNTVVLKPSEVSPLSALMLAKMAEEVGFPPGVINVIHGTGAEAGTALVKHPGINKIAFTGRYETGAQLMEAAKDGMKGVLLELGGKTPSVVFPDAPLDHVVNGVITGIFCHLGQICVAGSRLLVHESQHDELLERIIAKAQSLKQGDPTDPEMHLGCLATPTHCGFVRSRVEQAKQEGARLVLSGDISDDPLDCFYPPTIFDQVSPDMAVAKEEVFGPVLSVMTFKTEEEAIRIANDSDFGLMANIWSTDGTRALRVARELQAGRISINGGGYLRPNVPIYGYKKSGFGAELGFIEAAHEFCNSKSVIYSLATEKSPWPE
>NZ_CP043931.1|WP_002645283.1|3149360_3149798_+|response-regulator
MLQNRFSILLVEDDDVDREVVNRAIKRQELDCSLYTACDGAEALSILRGESSEKLNEDFVVLLDLNMPGMNGLQFLDELREDPELSHTIVFVLSTSEHPLDIAKAYKKNVAGYFSKTQVDLLVKMLSDYAQASLFPNPRVIQSIH
>NZ_CP043931.1|WP_081459426.1|3147449_3149312_+|HAMP-domain-containing-protein
MIDKIKPKRMTSLQWKIYIGFGGMILLLISNGILGIYGLGNAMQSFDQYRDVEKTYNESLSIDRNVQELKRRVNQYINTGHSSNRDAVQVTFEKLQKQVSGLLSDVNDKEISESLIIMNSHLEAYFKNFTLATEERQLRTSLVQTSLPEQGQRVQVNLENLEAQVHGSPKELSRHYLAALSAQRFFALAEKNALRYFAEPSTPFVDKTLSSLQDARSIIESIQAEALNSEKVLVNDLLSQLDEYEKICLRAFQATRSYLYLVNVVMSGEASEFAYYSMQIKNIAESKRTEINQATIVHTQDIKNITTIAIIGALLIGLYYAWRLAYSVVQPITAMTETFRRLGAGETLITIPATDRNDEIGEMATAADIFNKQNFVTKNLLQQSQTLSQELIQKTRELEMINSELDNFAYIASHDLKSPLRGIDQLAKWIQEDSAEELSEESCVNLNKLQGRIRTMETLLNDLLEYSRIGRITGECERTDTGAMLKEISELIDNPEKIQITIAPDMPVLNTFRTPLRHVFLNLITNAVKHHDHPETGKINIDYRELPDFYEFSVKDNGPGIDPKHHDRIFQMYQRVGNTTAEGSGMGLAIIKKQIETLGGTISVESAEKQNTIFHFTWSK
>NZ_CP043931.1|WP_002645281.1|3146087_3147386_+|extracellular-solute-binding-protein
MSTADSTDNIKQTRTTRRTFLKKTLALSSGVGAFTNAPYVFARHRTKLRVLGTHVTLQEELRKKAQQDLGIDIEFQPGGSAAVLHQASTRPASFDLYEQWSNSLKVLWQANAIQAIDIERLKYWDEINNLTKTGRITTGAKLGAGDAPSKLLYVQKDRSLSSVPSQQVSFLPYVHNVDSFGYNAGVIPRGIPYKTESWSWLLDERYAGKVALVNAPSIGLFDAVLAVQAKGLMKFKDIGNLSRNEIDELFAILIELRHQGHFRGVWSSGPQSVRLMQRKEVVIESMFSPAVFDLKGQGIDCVYAAPKEGYRAWHGVMCLSSQTQGAVKDAAYDYMNWWLSGWPGAFIAKQGYYISNPERSRSLLTDNEWNYWYEGKPALTNLAGTDGRVVVKQGEIRNGGSYLERFSNVAVWNTVMDTYEYSLLKWNEFLST
>NZ_CP043931.1|WP_002647442.1|3161106_3162543_-|sulfatase-like-hydrolase/transferase
MRNRRVFIAVTGVVFALVSTGASFAAKAERSGKPNIILVMADDQGWGDTSYNGHPFVKTPELDAMAKDAFVFDRFYAGAPVCSPTRASVMTGRNPNRTKVTNHGRYMRPHEQTIAETLKAAGYVTGIFGKVHLGSGQPDSPCNPSGMGFDEWVIGLNFFDNDPYLSRMGKIEHRKGKGSVILMDDTLEFLEKHKDGEQPIFTVVWFPSPHDPHAEVPEGPSLYKGKPHAGYYREITLLDQQVGRLRRALRNMNIAENTIVWYCSDNGGLVKETSGGREKKGSIYEGGLRVPGIIEWPARKLKGRTSVPVATFDIYPTLLSLAGVELYAPHPLDGMDVSGIITGSVTKRSKPMGFWHQLQRGQGTRSDQIQKAIMEKQQAGAPLPHDSVRMRKDVDEFPQFPEETTTGHAAWNDWPWKLHRIKGTKFELYNLSDDPMEKTDLSKNPEQAQRVKQMQQELDAWMRSVIRSINGKDYQESK
>NZ_CP043931.1|WP_149302986.1|3162813_3163134_-|hypothetical-protein
MPDKTILTIILSIFSTINGIVPGGFIGFYGLLYFMFYTQIEGFWPFFIFTVPIGMILLGAVGFALGFSLAKSLSESTLLKLIYANLVIIVSVALFIYSLFHNAITM
>NZ_CP043931.1|WP_081459540.1|3163406_3165608_-|tetratricopeptide-repeat-protein
MNEINPQIPAEHDPIKRSTKTNLLGVTLLYLFVILLVFSRCLPYPLLDWDDNLHLTDNPSLNPVSFKGMWNIWSQPYEGLYIPLSYSFFAIEVYLTQLFGFQDHAVLAPYIFHAGSLLLHLINSLLIYRILNIIVNDTRAACLGGLLFVLHPLQVESVVWISETRGLLSNLFSIATIYFTLKYVKKSETSTPAQTGKTNFDLIIATMCFVLSMLAKPSSVTTPLIIGILISVFFAEHLKKLGRWILCWLMLALAFIFITRGEQSDLLFDSPLWARPLIFGDALAFYFQKLFIPTPLLMQYDKSIKLILNTSWIYWSWLIPCLIFLLACIPRQRRVLQASLAIFITGLLPVLGLIPFSYQFISTVADRYVYLAMLGPALALAWLLRSHHKTVSLSLTYAALFLFAGLSFMQTATWSNSRTLYQHCLAHNPHAFIASNNLGHLAFNNQKYDEALHHFKNAISVIPDDVGTNENLGTIYMELGRKDQALQYFNKVLKIDPKHAGAHFALGVYYEAREDNKKAFNHYFQSLQAKPQNADALFGLGNLARKQKNYEEALRYYQLALKFNPDAPGIRETLGNLYLELGDMTNAQHQFDLSRKQGLLDPANEFNLGLMAAKNADLQKAIKHYESALQILDSTKKPDLHRQVIQELTFTYNMRGTTLQKKQDHEQAEYYFRLAMKTSPDFAPAYFNLGESLYRLGKTQAAISVLQTALTLVPPNSEPAIDIQKRIDLYQKK
>NZ_CP043931.1|WP_149303779.1|3166124_3167726_-|exo-alpha-sialidase
MLLLSVHAPLHADSKDTPVATGELLKDFVHPPVNFSPGAESNSEARKYQGIPTIERTPGGRLWAGWYAGPINEDRFNYVMAAISDDDGNTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGGLNVTMSITTENPDAENPNWTEPRALFPGVMINKPIVTKNGEWLMPAAIWRQDDSCRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERQDGSVWLLVRTSSYGIGDSVSTDAGRSWTEVKDHLQQTTSRFHIQRLASGNLLLIKHNGIDERSRGRNHLTAYLSADDGKSWKGGLLLDTRDMVSYPDATQAPDGTIYVIYDWNRADEKHILLTTFTEADVLAGKFQSSKARQRVLINHATGVNSKPWLKKQRVTSLNKHETAAVLLKKPGAQLKPVNGEIRDIKLGEAIFSNRSYAFHDKLPSFLQDGNFIFSPMENTEVDCTTLGVVYVVTPLPDRNRDSVTDELQKQGFELVSIPEFVLFLMPGGREIPGNVCSVYQRRVSAGDRIKFGKWGVVITKPE
>NZ_CP043931.1|WP_002647448.1|3168209_3169574_+|DUF1501-domain-containing-protein
MAGKPCSGPVNRREFMRIGSLCLGGLSLSQLLALRSEAGQPRQDTSVILLFLHGGPSQLETYDLKPEAPSDYRSLFNPIATNVPGMDICELFPRQAKIADKFSLVRSLHHDVGIHSDGGIIVLSGKRPSKLDPSSGSKSEHPDFGSVTSAVRGLSGKGTPPYVSIPSKFYMVQPTYLGLQHGPFESTEPSSANYRPPSLKLQAGLDGQHLVERRQLLRQIDRLRNDLDLNGDLAGNDKFRDLAFQMLTSPDAASSFEIDREPDSLRDRYGRNMWGQGCLLARRLAESGCGVVSLFFNTPKNGQEFTNWDDHILNAGRPGHFAKYMKVRLPYMDQALATLIEDIHERSLEKKIMVVAVGEFGRTPRLSSNNSGTGRNHWPQAYTALFSGGNLKMGQVVGATNSKAEYPTHSPCTPQDMLATIYQHLGIDFTQSLVDHQGRPIPILPHGKPIAELI
>NZ_CP043931.1|WP_002647449.1|3170040_3171006_+|DUF1559-domain-containing-protein
MLNRSHGRRSGFTLIELLVVIAIIAILISLLLPAVQQAREAARRSTCKNNLKQIGLALHNYHETYGMFPIGGTGDRDLPPRVSWQVRILPYVDQATLFNQIDMSGATASAVQATLADGRIVREIPMTIYTCPSDPYNQPRGGYAQCNYAGSMGSQSAPSGSSACSPFQVYALKSTLYGKTLLKGGISGMISRNGASIRIADVLDGSSNTIQVGETLPSCLDADRGSWSYAQSTCNAETMTLTPINEFTTCDQLGSSRRITNSACTAHTQWNYSLGFKSMHSGGAHFLMVDGAVRFLSENIDHADTFQHLGDRADGAVLGEF
>NZ_CP043931.1|WP_002647450.1|3171261_3171690_+|carboxypeptidase-regulatory-like-domain-containing-protein
MNRFTGILLLISAYTLFGCSGSDGPQVAAVEGTVTWEGKPLADAGVAFTPEKGPVAIGRTDESGQFSLSTQGRDGAVVGPHRVTIEAFEPLPPGKKAVSEEGEVLIVPVSRIPSKYGILTKSGLEARVTANDSENNFEFELK
>NZ_CP043931.1|WP_081459541.1|3171989_3172601_+|sigma-70-family-RNA-polymerase-sigma-factor
MGVRLLIETRITACCHDKDGSGVVLEKLAEQKNQESQFTKLLTAHRRQLYAFIYSLLADHADAEDVYQRCSMIMWEKFDQYDSSCDFLPWAMGIAFYEVKNFQRVSSRDRHHFSEQLLEQLFACMSTHKNDHSTQMLSLEKCLKSLRQKDLWLVQQVYWERRKCSAVAEEIGMKINALYDRVGRIRSQLKDCVRRRVAEVEHV
>NZ_CP043931.1|WP_002647452.1|3172593_3174228_+|FecR-domain-containing-protein
MSDNNQKNDEEFRRLLSRLAEGSLDKADAEVLESLLINQPERQALYLETMWLDASLIELGGVHNSAPELKVIRAQRKYSFPFSGWALTAIALSCLVVTVLLTFPVFEQRKQFAENESAEQAVESTTGRKNHDELLSEAILIAGHRTVLRGSSSPISIGSRFRFAEHYMLQEGLIKILFASGAEVILSAPAQFQVVDNEKLAVNLGNCSVYAPAGAEGFEVTTPTSEVIDLGTRFSVEVAEDGASSVSVVDGEAEVTPLSKSQKRTLFKGDSAYVGTDLHILEGGEKPQVDAYVASIPDRLIAYETIQDKLGQAKELSSLTVQRGGVSRTYHRDDFILPGINHFRPQTNVFGVVPANSPPDEFNRFGSMNLLFASGFINPGGQKDYFEGDFISGKDGTPGMNIVFDQPVINSPGPDIVIFDAQSIAHSLEGDVFHLYPHSSHPNAHPATFMKYDIDGYSADAQFMTGCRLIHLSQAFAEDGTPLPKFGRSQLINRVPSRMFAIGIDLDDMNIPPGGSITGLFLQDAQDDKDCIDPVVIVGLPPVK
>NZ_CP043931.1|WP_002647453.1|3174248_3177464_+|DUF1549-domain-containing-protein
MLHIFKYLVCILFCSLLTVSSASAADLSPEVMTFFEKEVRPLLSEHCWSCHGEKEQKGALRLDTRGHTLLGGESGTSIIPGKPDESLLIEAVRYESYEMPPSGKLKEKQIKILEKWVALGAPWPGADDSVPVRKEHGPAFTDEDRTWWAIQPLQEVIVPEIENSDWGRNEVDRFILAKLKQQGLAPSPEADRKALIRRVYFDLHGLPPTPEEVQEFVNDQSPDAYERLVERLLDSPRYGERWARHWLDVVRYADSDGYRADGFRPNAWRYRDYVIRSLNEDKPYNQFVQEQLAGDELFPDNVDAQIATGFLTHGNYEWNSRDVAGQWNLMLNELTDTVGDVFLGVGMQCARCHDHKFDPILQKDYFQLRAFFEPILIQTDQVAASAKQLEKYNREMADWEQATKEIRQEIEEIQIPYHKKAEAVVKSFPPEIQAMIDKPEEERTPRERQLVKLGWRQVEYNYDRLDRMLKPEDKEKVLALRRKLAKFDKLKPAPLPVAQQARDIGPVAPKTTIPKKRIECKPGFLTILDETPGDYFNSQSEETTSRRSALAQWLTQESNPLSTRVIVNRIWQYHFGKGLAPHSSDFGRLGGPPDHPELLDWLTRQFLEDGWRFKNLHRLIVTSATYRQSARHPQEAEMSALDPGNKYYWCADTRRLDAEQIRDSILSVTGQLNPQAGGPGVAASVPRRSIYLRVMRNSRDPLLDVFDLPRFFVSVPARDTTTSPVQSLQLFNSQQMLRLADQLSKRAFDESKTVPEAKREEAALRRAWEIVFGRSITDEELTIAREFLARHSKMLSEQEITVDLQELETATMPYRTGQSVVFQADKPSPFYVADDKQLKPENCTIEVFFQVRSIYESGAVRTLASKWTGKVPEPGWIFGVTGRGSRRKPQTLVFRTFGKRNDGSVGDEIIFSDQHIQLNTPYYAAVSFHVSGKQAGTIDFYLKDLSNDDEQLGRITKKHRIVQVQDNNLPIAFGRMVRNSQSYFDGLIDDIRFSSKALDAPSLLFTQESVTKDTLGYWKFDPVPGMFQDSSNHQHHITHEDQLSSAGNPRRAAFVDLCHILLNSNEFLYVH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP043931_3	3.1\|3160747\|34\|NZ_CP043931\|CRISPRCasFinder	3160747-3160780	34	NZ_CP043931.1	6466400-6466433	1	0.971
NZ_CP043931_3	3.1\|3160747\|34\|NZ_CP043931\|CRISPRCasFinder	3160747-3160780	34	NZ_CP043931.1	6810643-6810676	1	0.971

1. spacer 3.1|3160747|34|NZ_CP043931|CRISPRCasFinder matches to position: 6466400-6466433, mismatch: 1, identity: 0.971

tattaagaccggacacatgatacacaaccgttcg	CRISPR spacer
tatttagaccggacacatgatacacaaccgttcg	Protospacer
**** *****************************

2. spacer 3.1|3160747|34|NZ_CP043931|CRISPRCasFinder matches to position: 6810643-6810676, mismatch: 1, identity: 0.971

tattaagaccggacacatgatacacaaccgttcg	CRISPR spacer
tatttagaccggacacatgatacacaaccgttcg	Protospacer
**** *****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043931_2	2.2\|782962\|25\|NZ_CP043931\|CRISPRCasFinder	782962-782986	25	NZ_CP015734	Arthrobacter sp. U41 plasmid unnamed2, complete sequence	70766-70790	5	0.8
NZ_CP043931_2	2.2\|782962\|25\|NZ_CP043931\|CRISPRCasFinder	782962-782986	25	NZ_CP015734	Arthrobacter sp. U41 plasmid unnamed2, complete sequence	163652-163676	5	0.8

1. spacer 2.2|782962|25|NZ_CP043931|CRISPRCasFinder matches to NZ_CP015734 (Arthrobacter sp. U41 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.8

catcgggctggaatcgtcggcgacg	CRISPR spacer
ggccgggctggcatcgtcggcgacc	Protospacer
 ..******** ************

2. spacer 2.2|782962|25|NZ_CP043931|CRISPRCasFinder matches to NZ_CP015734 (Arthrobacter sp. U41 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.8

catcgggctggaatcgtcggcgacg	CRISPR spacer
ggccgggctggcatcgtcggcgacc	Protospacer
 ..******** ************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1642579 : 1648472

Bacillus_virus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149303257.1\|1642579_1644055_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.7e-105	46.3
WP_002645645.1\|1644104_1646096_+	NAD(+) synthase	G3MA24	Bacillus_virus	1.9e-08	27.4
WP_002645646.1\|1646106_1646796_+	NUDIX hydrolase	G3MA14	Bacillus_virus	1.6e-31	35.9
WP_002645647.1\|1646808_1647408_+	bifunctional nicotinamidase/pyrazinamidase	A0A2K9L2K0	Tupanvirus	8.7e-26	34.0
WP_002645648.1\|1647455_1648001_+	RNA 2'-phosphotransferase	A0A2H4UTN1	Bodo_saltans_virus	3.7e-39	43.1
WP_002645649.1\|1648004_1648472_-	NADAR family protein	A0A1X7QH77	Faustovirus	4.3e-36	48.3

DBSCAN-SWA_2

5162950 : 5263411

Wolbachia_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149302455.1\|5162950_5163937_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	8.7e-31	32.9
WP_081459585.1\|5164183_5165638_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_002649809.1\|5165922_5166105_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002649807.1\|5166323_5166833_-	hypothetical protein	NA	NA	NA	NA
WP_002645297.1\|5167403_5167757_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_002645298.1\|5167750_5168110_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.4e-10	30.2
WP_002645299.1\|5168208_5169732_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	7.5e-90	38.6
WP_081459353.1\|5170175_5171822_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_081459352.1\|5171866_5172418_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_002643562.1\|5172309_5172693_-	hypothetical protein	NA	NA	NA	NA
WP_081459634.1\|5173146_5173344_-\|transposase	transposase	NA	NA	NA	NA
WP_002649280.1\|5173268_5173430_-	hypothetical protein	NA	NA	NA	NA
WP_002649281.1\|5173555_5174413_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_155367893.1\|5174495_5175017_-	hypothetical protein	NA	NA	NA	NA
WP_155367894.1\|5175037_5212339_-	tandem-95 repeat protein	NA	NA	NA	NA
WP_002649707.1\|5213448_5213976_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_002649708.1\|5213968_5215624_+	hypothetical protein	NA	NA	NA	NA
WP_002649709.1\|5215637_5218523_+	DUF1549 domain-containing protein	NA	NA	NA	NA
WP_002649710.1\|5218533_5219943_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_149302564.1\|5220845_5221628_+	hypothetical protein	NA	NA	NA	NA
WP_002649081.1\|5222014_5222209_-	hypothetical protein	NA	NA	NA	NA
WP_002649082.1\|5222296_5222506_-	hypothetical protein	NA	NA	NA	NA
WP_044240132.1\|5222583_5223939_-	NAD(P)/FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	4.0e-34	25.9
WP_002649084.1\|5224053_5225145_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	NA	NA	NA
WP_002649085.1\|5225468_5226473_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_002649086.1\|5226542_5227913_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_002649087.1\|5228033_5229326_-	cytochrome P450	NA	NA	NA	NA
WP_002649088.1\|5229652_5231818_-	amylo-alpha-1,6-glucosidase	NA	NA	NA	NA
WP_081459617.1\|5233672_5234473_+	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_002649092.1\|5234552_5235722_+	glutathione-dependent formaldehyde dehydrogenase	E3SJ82	Synechococcus_phage	3.6e-07	27.2
WP_002649093.1\|5235718_5236741_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_002649094.1\|5236903_5237158_-	hypothetical protein	NA	NA	NA	NA
WP_002649095.1\|5237229_5238105_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	7.9e-52	43.1
WP_002649097.1\|5238372_5239509_-	c-type cytochrome	NA	NA	NA	NA
WP_044240140.1\|5239505_5240138_-	hypothetical protein	NA	NA	NA	NA
WP_149303678.1\|5240221_5240560_-	hypothetical protein	NA	NA	NA	NA
WP_002649100.1\|5240628_5243169_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_002649101.1\|5243180_5244176_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_002649103.1\|5244406_5245000_-	superoxide dismutase family protein	Q9EMF1	Amsacta_moorei_entomopoxvirus	1.4e-20	47.3
WP_002649104.1\|5245178_5245691_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_002649107.1\|5246281_5249344_-	acriflavine resistance protein B	NA	NA	NA	NA
WP_002649108.1\|5249340_5250597_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_002649109.1\|5250722_5251064_-	cupin domain-containing protein	NA	NA	NA	NA
WP_002649111.1\|5251785_5252739_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_002649112.1\|5252952_5253543_+	superoxide dismutase family protein	M1ICI8	Paramecium_bursaria_Chlorella_virus	1.4e-23	47.3
WP_002649113.1\|5253678_5254485_+	hypothetical protein	NA	NA	NA	NA
WP_002649114.1\|5254572_5259915_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	3.3e-47	35.1
WP_002649115.1\|5260235_5261273_-	cation transporter	NA	NA	NA	NA
WP_002649116.1\|5261997_5262387_+	hypothetical protein	NA	NA	NA	NA
WP_149302455.1\|5262424_5263411_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	8.7e-31	32.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043931

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection