CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046277	Salmonella enterica strain FDAARGOS_710 chromosome, complete genome	3 crisprs	cas3,DEDDh,DinG,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	0	6	8	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046277_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046277_1

4198737-4198837

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046277_1

>merge|NZ_CP046277|1|4198737-4198837|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP046277|1|1|4198737-4198837|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046277.1\|WP_023212280.1\|4192093_4193038_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP046277.1\|WP_001552025.1\|4206103_4206739_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP046277.1\|WP_077916006.1\|4184815_4186225_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP046277.1\|WP_000802069.1\|4195944_4196829_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP046277.1\|WP_000908562.1\|4204186_4204690_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP046277.1\|WP_000105461.1\|4186786_4187239_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP046277.1\|WP_001540959.1\|4201569_4202466_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP046277.1\|WP_010723222.1\|4196934_4197015_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP046277.1\|WP_001031038.1\|4187266_4188769_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP046277.1\|WP_001670767.1\|4193699_4195835_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP046277.1\|WP_000928379.1\|4204676_4204994_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP046277.1\|WP_000884721.1\|4203668_4204193_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP046277.1\|WP_000224322.1\|4199050_4200295_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP046277.1\|WP_000059465.1\|4193188_4193458_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP046277.1\|WP_000130432.1\|4200385_4201393_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP046277.1\|WP_001040208.1\|4191692_4192094_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP046277.1\|WP_000037599.1\|4205454_4205973_-\|protein/nucleic-acid-deglycase	unknown	unknown	gnl\|CDD\|153228
NZ_CP046277.1\|WP_000133064.1\|4188793_4191472_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP046277.1\|WP_000421310.1\|4202456_4203452_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP046277.1\|WP_000380406.1\|4205031_4205475_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127

Protein	Function_ID	Function_description	E-value
NZ_CP046277.1\|WP_023212280.1\|4192093_4193038_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP046277.1\|WP_001552025.1\|4206103_4206739_+\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.90602e-69
NZ_CP046277.1\|WP_077916006.1\|4184815_4186225_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP046277.1\|WP_000802069.1\|4195944_4196829_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP046277.1\|WP_000908562.1\|4204186_4204690_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP046277.1\|WP_000105461.1\|4186786_4187239_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP046277.1\|WP_001540959.1\|4201569_4202466_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP046277.1\|WP_010723222.1\|4196934_4197015_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP046277.1\|WP_001031038.1\|4187266_4188769_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP046277.1\|WP_001670767.1\|4193699_4195835_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP046277.1\|WP_000928379.1\|4204676_4204994_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44
NZ_CP046277.1\|WP_000884721.1\|4203668_4204193_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP046277.1\|WP_000224322.1\|4199050_4200295_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP046277.1\|WP_000059465.1\|4193188_4193458_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP046277.1\|WP_000130432.1\|4200385_4201393_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP046277.1\|WP_001040208.1\|4191692_4192094_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.271e-52
NZ_CP046277.1\|WP_000037599.1\|4205454_4205973_-\|protein/nucleic-acid-deglycase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	5.12939e-86
NZ_CP046277.1\|WP_000133064.1\|4188793_4191472_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP046277.1\|WP_000421310.1\|4202456_4203452_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.99361e-116
NZ_CP046277.1\|WP_000380406.1\|4205031_4205475_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.52232e-98

>NZ_CP046277.1|WP_010723222.1|4196934_4197015_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP046277.1|WP_000802069.1|4195944_4196829_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP046277.1|WP_001670767.1|4193699_4195835_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP046277.1|WP_000059465.1|4193188_4193458_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP046277.1|WP_023212280.1|4192093_4193038_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLRELVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDGKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP046277.1|WP_001040208.1|4191692_4192094_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIALILQREIKDPRVGMMTTVSGVEMSRDLAYAKVFVTFLNDQDEAAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP046277.1|WP_000133064.1|4188793_4191472_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP046277.1|WP_001031038.1|4187266_4188769_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP046277.1|WP_000105461.1|4186786_4187239_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP046277.1|WP_077916006.1|4184815_4186225_-|argininosuccinate-synthase
MHKNALKQKPISLSVNQAGFYSMTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEVVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQVGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKAERLTMEKGESVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKAK
>NZ_CP046277.1|WP_000224322.1|4199050_4200295_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNIVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFVPPIVGGLLWPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGTPMIVLILVFGVGNAVIHILSSFNLLPVYQ
>NZ_CP046277.1|WP_000130432.1|4200385_4201393_-|LLM-class-flavin-dependent-oxidoreductase
MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFWSPSEQYGVQQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMDVKQELLG
>NZ_CP046277.1|WP_001540959.1|4201569_4202466_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVALSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP046277.1|WP_000421310.1|4202456_4203452_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDSCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP046277.1|WP_000884721.1|4203668_4204193_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP046277.1|WP_000908562.1|4204186_4204690_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP046277.1|WP_000928379.1|4204676_4204994_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP046277.1|WP_000380406.1|4205031_4205475_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGVIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA
>NZ_CP046277.1|WP_000037599.1|4205454_4205973_-|protein/nucleic-acid-deglycase
MSKKIAVLITDEFEDSEFTSPAAEFRQAGHEVITIEKEAGKTVKGKKGEASVTIDKAIDDVRPDEFDALLLPGGHSPDYLRGDSRFVDFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
>NZ_CP046277.1|WP_001552025.1|4206103_4206739_+|NAD(P)H-binding-protein
MSQVLITGATGLVGGHLLRMLINTPQVSAIAAPTRRPLTDIVGVYNPHDPQLTDALAQVTDPVDIVFCCLGTTRREAGSKAAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQDWPRLTIARPSMLLGDRTTRRVNETLFAPLFRLLPGNWKSIDARDVARAMLAEALAPAQEGVTILTSSQLREKAG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP046277_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046277_2

4556726-4556998

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

4 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP046277_2

>merge|NZ_CP046277|2|4556726-4556998|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTTCTCCGGAAAACCGCTACAAATACTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCTTCGTAACGCGTGGGAAGAGGCACGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATACGTATTTTGATCACCTGCTGCGGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGTCAGCGGGGATAGCCGT

>NZ_CP046277|2|1|4556726-4556937|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTCTCCGGAAAACCGCTACAAATACTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCTTCGTAACGCGTGGGAAGAGGCACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATACGTATTTTGATCACCTGCTGCGGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP046277|2|2|4556726-4556998|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTCTCCGGAAAACCGCTACAAATACTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCTTCGTAACGCGTGGGAAGAGGCACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATACGTATTTTGATCACCTGCTGCGGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

>NZ_CP046277|2|1|4556726-4556998|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTCTCCGGAAAACCGCTACAAATACTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCTTCGTAACGCGTGGGAAGAGGCACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATACGTATTTTGATCACCTGCTGCGGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046277.1\|WP_000226841.1\|4547871_4550106_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP046277.1\|WP_023217503.1\|4546524_4547820_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP046277.1\|WP_000706486.1\|4542524_4543667_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP046277.1\|WP_000210451.1\|4551575_4552376_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP046277.1\|WP_000480218.1\|4550190_4550547_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP046277.1\|WP_001261199.1\|4550512_4550809_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP046277.1\|WP_000210864.1\|4552603_4554241_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP046277.1\|WP_031569639.1\|4564572_4567236_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046277.1\|WP_031569648.1\|4558766_4560566_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP046277.1\|WP_000029527.1\|4568803_4569352_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP046277.1\|WP_031569632.1\|4569365_4570424_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP046277.1\|WP_000036731.1\|4554323_4555622_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP046277.1\|WP_000186399.1\|4543710_4546467_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP046277.1\|WP_031569643.1\|4562353_4563088_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP046277.1\|WP_000108313.1\|4557980_4558343_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP046277.1\|WP_001290665.1\|4560565_4562278_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP046277.1\|WP_031569635.1\|4567247_4568807_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP046277.1\|WP_001199956.1\|4555757_4556429_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP046277.1\|WP_015406308.1\|4563175_4564129_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP046277.1\|WP_001207993.1\|4557095_4557893_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
NZ_CP046277.1\|WP_000226841.1\|4547871_4550106_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP046277.1\|WP_023217503.1\|4546524_4547820_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP046277.1\|WP_000706486.1\|4542524_4543667_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP046277.1\|WP_000210451.1\|4551575_4552376_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP046277.1\|WP_000480218.1\|4550190_4550547_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP046277.1\|WP_001261199.1\|4550512_4550809_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	4.79136e-12
NZ_CP046277.1\|WP_000210864.1\|4552603_4554241_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP046277.1\|WP_031569639.1\|4564572_4567236_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP046277.1\|WP_031569648.1\|4558766_4560566_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP046277.1\|WP_000029527.1\|4568803_4569352_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.03959e-34
NZ_CP046277.1\|WP_031569632.1\|4569365_4570424_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.11307e-136
NZ_CP046277.1\|WP_000036731.1\|4554323_4555622_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP046277.1\|WP_000186399.1\|4543710_4546467_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP046277.1\|WP_031569643.1\|4562353_4563088_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.05978e-136
NZ_CP046277.1\|WP_000108313.1\|4557980_4558343_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP046277.1\|WP_001290665.1\|4560565_4562278_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP046277.1\|WP_031569635.1\|4567247_4568807_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	3.56347e-173
NZ_CP046277.1\|WP_001199956.1\|4555757_4556429_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.27998e-154
NZ_CP046277.1\|WP_015406308.1\|4563175_4564129_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP046277.1\|WP_001207993.1\|4557095_4557893_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.20818e-102

>NZ_CP046277.1|WP_001199956.1|4555757_4556429_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQDYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP046277.1|WP_000036731.1|4554323_4555622_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAIFGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP046277.1|WP_000210864.1|4552603_4554241_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>NZ_CP046277.1|WP_000210451.1|4551575_4552376_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP046277.1|WP_001261199.1|4550512_4550809_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRTVKLTPKASEDLENIWHYGWLYFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFERHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP046277.1|WP_000480218.1|4550190_4550547_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP046277.1|WP_000226841.1|4547871_4550106_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP046277.1|WP_023217503.1|4546524_4547820_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAVLLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMIARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP046277.1|WP_000186399.1|4543710_4546467_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP046277.1|WP_000706486.1|4542524_4543667_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIVQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP046277.1|WP_001207993.1|4557095_4557893_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDDSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHNAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTMWRVRRFLQEQKPEKLCGCHCTGVWGRLWLPEITAPATGDVLRF
>NZ_CP046277.1|WP_000108313.1|4557980_4558343_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP046277.1|WP_031569648.1|4558766_4560566_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMLGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP046277.1|WP_001290665.1|4560565_4562278_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP046277.1|WP_031569643.1|4562353_4563088_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQCGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP046277.1|WP_015406308.1|4563175_4564129_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP046277.1|WP_031569639.1|4564572_4567236_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGEIDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPESWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP046277.1|WP_031569635.1|4567247_4568807_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADSKKMKIRCWYEHHFPLLMTEGLIPDLRKAIQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP046277.1|WP_000029527.1|4568803_4569352_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAPWHVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP046277.1|WP_031569632.1|4569365_4570424_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVGHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP046277_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046277_3

4573120-4573575

TypeI-E

I-E

Consensus_repeat	Method
AAGTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

7 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP046277_3

>merge|NZ_CP046277|3|4573120-4573575|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGATTACTGATAATTCACCACTGCAGTACGGAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGATATGGCTAAAACGGCGCTTGAGAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGACAGTGCGGCTCTCTGAGTTGAGCACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCAATAACAGGAAAAGGAGAGGCCGACTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGATGGGCGGAGGCTTAATTGGCGGCGCTGCCGGGTGTTCCCCGCGTCAGCGGGGATGAACCGCAGACGTAGAGATTGAGAACACAAATGACTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAGTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP046277|3|2|4573120-4573331|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGAT	TACTGATAATTCACCACTGCAGTACGGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCGGC	CGATATGGCTAAAACGGCGCTTGAGAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCGGT	GACAGTGCGGCTCTCTGAGTTGAGCACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP046277|3|3|4573120-4573575|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTACTGATAATTCACCACTGCAGTACGGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGATATGGCTAAAACGGCGCTTGAGAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGACAGTGCGGCTCTCTGAGTTGAGCACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCAATAACAGGAAAAGGAGAGGCCGACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGGGCGGAGGCTTAATTGGCGGCGCTGCCGG
GTGTTCCCCGCGTCAGCGGGGATGAACCG	CAGACGTAGAGATTGAGAACACAAATGACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP046277|3|2|4573120-4573575|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTACTGATAATTCACCACTGCAGTACGGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGATATGGCTAAAACGGCGCTTGAGAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGACAGTGCGGCTCTCTGAGTTGAGCACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCAATAACAGGAAAAGGAGAGGCCGACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGGGCGGAGGCTTAATTGGCGGCGCTGCCGG
GTGTTCCCCGCGTCAGCGGGGATGAACCG	CAGACGTAGAGATTGAGAACACAAATGACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046277.1\|WP_000281480.1\|4571162_4571813_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP046277.1\|WP_015406308.1\|4563175_4564129_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP046277.1\|WP_000372384.1\|4574886_4575795_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP046277.1\|WP_000517480.1\|4578400_4578712_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP046277.1\|WP_000029527.1\|4568803_4569352_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP046277.1\|WP_155982834.1\|4575804_4577244_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP046277.1\|WP_031569639.1\|4564572_4567236_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046277.1\|WP_001219244.1\|4579440_4579920_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP046277.1\|WP_000085108.1\|4570434_4571181_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP046277.1\|WP_031569632.1\|4569365_4570424_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP046277.1\|WP_000144832.1\|4571809_4572730_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP046277.1\|WP_000134248.1\|4579916_4580966_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP046277.1\|WP_031569643.1\|4562353_4563088_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP046277.1\|WP_088546084.1\|4573589_4574636_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP046277.1\|WP_001221538.1\|4580946_4581708_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP046277.1\|WP_001173663.1\|4577230_4577836_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP046277.1\|WP_031569635.1\|4567247_4568807_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP046277.1\|WP_000741649.1\|4578730_4579441_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP046277.1\|WP_023204590.1\|4572729_4573023_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP046277.1\|WP_001118109.1\|4577853_4578210_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
NZ_CP046277.1\|WP_000281480.1\|4571162_4571813_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.41953e-75
NZ_CP046277.1\|WP_015406308.1\|4563175_4564129_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP046277.1\|WP_000372384.1\|4574886_4575795_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP046277.1\|WP_000517480.1\|4578400_4578712_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP046277.1\|WP_000029527.1\|4568803_4569352_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.03959e-34
NZ_CP046277.1\|WP_155982834.1\|4575804_4577244_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP046277.1\|WP_031569639.1\|4564572_4567236_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP046277.1\|WP_001219244.1\|4579440_4579920_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP046277.1\|WP_000085108.1\|4570434_4571181_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.18709e-48
NZ_CP046277.1\|WP_031569632.1\|4569365_4570424_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.11307e-136
NZ_CP046277.1\|WP_000144832.1\|4571809_4572730_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP046277.1\|WP_000134248.1\|4579916_4580966_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP046277.1\|WP_031569643.1\|4562353_4563088_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.05978e-136
NZ_CP046277.1\|WP_088546084.1\|4573589_4574636_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP046277.1\|WP_001221538.1\|4580946_4581708_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP046277.1\|WP_001173663.1\|4577230_4577836_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP046277.1\|WP_031569635.1\|4567247_4568807_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	3.56347e-173
NZ_CP046277.1\|WP_000741649.1\|4578730_4579441_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP046277.1\|WP_023204590.1\|4572729_4573023_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.3037e-64
NZ_CP046277.1\|WP_001118109.1\|4577853_4578210_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49

>NZ_CP046277.1|WP_023204590.1|4572729_4573023_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGCGNAVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP046277.1|WP_000144832.1|4571809_4572730_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP046277.1|WP_000281480.1|4571162_4571813_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALEWLVRQGEQNGFTLREASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINDPALFLQRLAQGYGKSRAFGCGMMMIKPGEDA
>NZ_CP046277.1|WP_000085108.1|4570434_4571181_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGRAPDALREAYRQYQDKFNALRLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLSKEDACISQE
>NZ_CP046277.1|WP_031569632.1|4569365_4570424_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVGHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP046277.1|WP_000029527.1|4568803_4569352_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAPWHVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP046277.1|WP_031569635.1|4567247_4568807_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADSKKMKIRCWYEHHFPLLMTEGLIPDLRKAIQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP046277.1|WP_031569639.1|4564572_4567236_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGEIDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPESWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP046277.1|WP_015406308.1|4563175_4564129_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP046277.1|WP_031569643.1|4562353_4563088_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQCGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP046277.1|WP_088546084.1|4573589_4574636_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPAPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSGAEKNNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP046277.1|WP_000372384.1|4574886_4575795_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP046277.1|WP_155982834.1|4575804_4577244_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDHLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWGARDLLGDKHGAA
>NZ_CP046277.1|WP_001173663.1|4577230_4577836_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP046277.1|WP_001118109.1|4577853_4578210_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP046277.1|WP_000517480.1|4578400_4578712_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP046277.1|WP_000741649.1|4578730_4579441_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP046277.1|WP_001219244.1|4579440_4579920_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP046277.1|WP_000134248.1|4579916_4580966_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNVQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP046277.1|WP_001221538.1|4580946_4581708_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	679642-679671	5	0.833
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	679642-679673	6	0.812
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	MK765597	Tortoise microvirus 45 isolate 45_SP_116, complete genome	5398-5427	7	0.767
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	MK765566	Tortoise microvirus 16 isolate 16_SP_72, complete genome	5398-5427	7	0.767
NZ_CP046277_3	3.8\|4573393\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573393-4573424	32	NZ_CP037921	Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence	150840-150871	7	0.781
NZ_CP046277_2	2.4\|4556938\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4556938-4556969	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	MK765597	Tortoise microvirus 45 isolate 45_SP_116, complete genome	5398-5429	8	0.75
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	MK765566	Tortoise microvirus 16 isolate 16_SP_72, complete genome	5398-5429	8	0.75
NZ_CP046277_3	3.9\|4573454\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573454-4573485	32	NZ_KM406416	Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence	52772-52803	8	0.75
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP034093	Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence	108478-108507	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP038645	Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence	48707-48736	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	CP033517	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence	77863-77892	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP016301	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence	10113-10142	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP016296	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence	10113-10142	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP016299	Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence	10113-10142	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP024125	Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence	48133-48162	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP026128	Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence	61932-61961	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP020585	Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence	56900-56929	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NC_023031	Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence	70372-70401	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_MK386680	Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence	96499-96528	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP018257	Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence	73224-73253	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP010780	Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence	17801-17830	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	MK765665	Tortoise microvirus 108 isolate 108_SP_3, complete genome	5472-5501	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP039519	Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence	31340-31369	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP033864	Acinetobacter sp. FDAARGOS_560 plasmid unnamed2	54149-54178	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP010398	Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence	33513-33542	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP015484	Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence	39457-39486	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP018333	Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence	100884-100913	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	CP031744	Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence	39457-39486	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP050905	Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence	45351-45380	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NC_020524	Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence	39457-39486	9	0.7
NZ_CP046277_3	3.2\|4573212\|30\|NZ_CP046277\|PILER-CR	4573212-4573241	30	NZ_CP021327	Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence	102930-102959	9	0.7
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NC_021709	Alteromonas mediterranea 615 plasmid unnamed, complete sequence	120488-120519	9	0.719
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	MK765665	Tortoise microvirus 108 isolate 108_SP_3, complete genome	5472-5503	10	0.688
NZ_CP046277_3	3.10\|4573515\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573515-4573546	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP046277_3	3.10\|4573515\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573515-4573546	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP034093	Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence	108478-108509	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP038645	Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence	48707-48738	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP039519	Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence	31338-31369	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	CP033517	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence	77863-77894	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP016301	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence	10113-10144	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP016296	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence	10113-10144	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP016299	Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence	10113-10144	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP024125	Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence	48133-48164	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP026128	Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence	61932-61963	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP033864	Acinetobacter sp. FDAARGOS_560 plasmid unnamed2	54147-54178	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP010398	Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence	33511-33542	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP015484	Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence	39455-39486	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP018333	Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence	100882-100913	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP020585	Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence	56900-56931	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NC_023031	Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence	70372-70403	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	CP031744	Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence	39455-39486	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP050905	Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence	45349-45380	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NC_020524	Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence	39455-39486	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP021327	Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence	102928-102959	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_MK386680	Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence	96499-96530	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP018257	Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence	73224-73255	11	0.656
NZ_CP046277_3	3.5\|4573210\|32\|NZ_CP046277\|CRISPRCasFinder,CRT	4573210-4573241	32	NZ_CP010780	Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence	17801-17832	11	0.656

1. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

2. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

3. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

4. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

--gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
gagtcg--atggctgaaacggcgcgtgagaac	Protospacer
  *.**  ******.********* *******

5. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

6. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

--gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
gagtcg--atggctgaaacggcgcgtgagaacgg	Protospacer
  *.**  ******.********* *******.*

7. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

8. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

9. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to MK765597 (Tortoise microvirus 45 isolate 45_SP_116, complete genome) position: , mismatch: 7, identity: 0.767

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
gataatttggctaaatcggcgcttgagcgc	Protospacer
* ..** ******** *********** .*

10. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to MK765566 (Tortoise microvirus 16 isolate 16_SP_72, complete genome) position: , mismatch: 7, identity: 0.767

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
gataatttggctaaatcggcgcttgagcgc	Protospacer
* ..** ******** *********** .*

11. spacer 3.8|4573393|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP037921 (Hymenobacter sp. 17J36-26 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

atgggcggaggcttaattggcggc--gctgccgg	CRISPR spacer
atgggcggaggcttgattcgcggcaaactgtt--	Protospacer
**************.*** *****  .***..

12. spacer 2.4|4556938|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

13. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to MK765597 (Tortoise microvirus 45 isolate 45_SP_116, complete genome) position: , mismatch: 8, identity: 0.75

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
gataatttggctaaatcggcgcttgagcgctg	Protospacer
* ..** ******** *********** .* *

14. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to MK765566 (Tortoise microvirus 16 isolate 16_SP_72, complete genome) position: , mismatch: 8, identity: 0.75

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
gataatttggctaaatcggcgcttgagcgctg	Protospacer
* ..** ******** *********** .* *

15. spacer 3.9|4573454|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 8, identity: 0.75

cagacgtagagattgagaacacaaatgactca	CRISPR spacer
cagacgtagagattgaaaaaacagaatgcaaa	Protospacer
****************.** ***.*  .*  *

16. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

17. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

18. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

19. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

20. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

21. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

22. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

23. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

24. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

25. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

26. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

27. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

28. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

29. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to MK765665 (Tortoise microvirus 108 isolate 108_SP_3, complete genome) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
aataatttggctaaatcggcgcttgagcgt	Protospacer
. ..** ******** *********** ..

30. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

31. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

32. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

33. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

34. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

35. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

36. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

37. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

38. spacer 3.2|4573212|30|NZ_CP046277|PILER-CR matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 9, identity: 0.7

gccgatatggctaaaacggcgcttgagaac	CRISPR spacer
ctggatatggcacaaacggcgcttgaattt	Protospacer
 . ********  *************.  .

39. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_021709 (Alteromonas mediterranea 615 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
agtgaagctgctaaaaaggcgattgagaacag	Protospacer
. .** .. ******* **** **********

40. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to MK765665 (Tortoise microvirus 108 isolate 108_SP_3, complete genome) position: , mismatch: 10, identity: 0.688

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
aataatttggctaaatcggcgcttgagcgttg	Protospacer
. ..** ******** *********** .. *

41. spacer 3.10|4573515|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

42. spacer 3.10|4573515|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

43. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

44. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

45. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

46. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

47. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

48. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

49. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

50. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

51. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

52. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

53. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

54. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

55. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

56. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

57. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

58. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

59. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

60. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

61. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

62. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

63. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

64. spacer 3.5|4573210|32|NZ_CP046277|CRISPRCasFinder,CRT matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 11, identity: 0.656

gccgatatggctaaaacggcgcttgagaacag	CRISPR spacer
ctggatatggcacaaacggcgcttgaatttgt	Protospacer
 . ********  *************.  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

125523 : 135321

Enterobacteria_phage(87.5%)

integrase

attL 131194:131209|attR 137936:137951

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023198743.1\|125523_127857_-	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.5
WP_000743152.1\|127871_128192_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_001145746.1\|128188_128449_-	hypothetical protein	NA	NA	NA	NA
WP_000459283.1\|128522_128972_-	hypothetical protein	Q7M298	Enterobacteria_phage	1.5e-43	70.5
WP_000556707.1\|128964_129264_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	6.1e-28	70.7
WP_000986181.1\|129253_129856_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.6e-43	70.1
WP_000149859.1\|130666_131404_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.7e-76	62.3
131194:131209	attL	NA	NA	NA	NA
WP_000984203.1\|131400_131646_+	transcriptional regulator	Q7M294	Enterobacteria_phage	5.3e-30	75.3
WP_000210076.1\|131662_132229_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.3e-55	62.7
WP_001610101.1\|132561_133434_+	hypothetical protein	NA	NA	NA	NA
WP_023198740.1\|133433_134093_+	hypothetical protein	NA	NA	NA	NA
WP_000124725.1\|134127_135321_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.1e-107	49.1
137936:137951	attR	NA	NA	NA	NA

DBSCAN-SWA_2

652822 : 661993

Enterobacteria_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|652822_653770_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824854.1\|653753_654485_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|654465_654573_-	protein YohO	NA	NA	NA	NA
WP_001240416.1\|654632_655364_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|655586_657272_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|657268_657988_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950412.1\|658034_658502_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-74	90.3
WP_001221794.1\|658558_659089_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.2e-16	33.1
WP_000703136.1\|659260_659719_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
WP_000195336.1\|659959_661993_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_3

729220 : 735517

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111834.1\|729220_730624_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.0e-21	28.2
WP_000981469.1\|730801_731695_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697842.1\|732071_733157_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.2e-103	54.2
WP_001023662.1\|733156_734056_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_001612007.1\|734103_734982_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.9e-107	64.1
WP_001100807.1\|734986_735517_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.7e-52	57.1

DBSCAN-SWA_4

819095 : 826329

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000394197.1\|819095_819515_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_023212516.1\|819517_820786_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	6.4e-228	92.4
WP_000208509.1\|821240_821453_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|821463_821652_+	hypothetical protein	NA	NA	NA	NA
WP_031567923.1\|821910_823089_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.9e-109	57.0
WP_000107440.1\|823738_824050_+	hypothetical protein	NA	NA	NA	NA
WP_000377042.1\|824129_824825_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_001157316.1\|824898_826329_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.8e-105	57.4

DBSCAN-SWA_5

1110963 : 1117707

Salmonella_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000230462.1\|1110963_1111770_-	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	4.6e-14	27.4
WP_001128869.1\|1111771_1112764_-	peptide ABC transporter ATP-binding protein SapD	NA	NA	NA	NA
WP_001146139.1\|1112763_1113654_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_001543117.1\|1113777_1114179_+	DUF4102 domain-containing protein	K7PGY1	Enterobacteria_phage	8.4e-33	58.4
WP_001605114.1\|1114558_1115281_-	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	4.3e-35	38.9
WP_031568331.1\|1115751_1115934_+	hypothetical protein	S4TSR3	Salmonella_phage	1.4e-22	79.1
WP_001605117.1\|1116183_1116324_+	hypothetical protein	A0A0U2KD26	Escherichia_phage	6.5e-09	77.1
WP_072010149.1\|1116362_1116662_+	pertussis toxin subunit	A0A0U2KD26	Escherichia_phage	1.2e-12	52.9
WP_000727928.1\|1116588_1117014_+	peptidase	NA	NA	NA	NA
WP_077905325.1\|1117392_1117707_+	recombinase family protein	A0A1S6L009	Salmonella_phage	4.3e-40	86.1

DBSCAN-SWA_6

1154548 : 1162277

Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031568353.1\|1154548_1155922_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.8e-51	32.0
WP_031568355.1\|1155965_1156901_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	9.4e-144	97.3
WP_001223393.1\|1157576_1159409_+	DUF4765 family protein	A0A0N7KZG3	Stx2-converting_phage	2.5e-47	34.7
WP_000159242.1\|1159683_1160022_+	EamA family transporter	NA	NA	NA	NA
WP_001082296.1\|1160074_1160509_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	9.4e-30	52.1
WP_155982779.1\|1161022_1162277_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.7e-18	34.5

DBSCAN-SWA_7

1553117 : 1641976

107

Enterobacteria_phage(30.77%)

integrase,tail,holin,head,tRNA,terminase,capsid,portal

attL 1588640:1588654|attR 1637878:1637892

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000829534.1\|1553117_1553645_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_000272232.1\|1553641_1553749_-	hypothetical protein	NA	NA	NA	NA
WP_000460698.1\|1553954_1554401_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_000579798.1\|1554380_1555175_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000205347.1\|1555275_1556460_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_001222533.1\|1556578_1556926_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_000487132.1\|1556911_1557223_-	hypothetical protein	NA	NA	NA	NA
WP_000673492.1\|1557291_1557543_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_001589065.1\|1557738_1557837_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_000512149.1\|1557975_1558224_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_000605462.1\|1558537_1559185_-	hypothetical protein	NA	NA	NA	NA
WP_000513733.1\|1559408_1559591_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_001248993.1\|1559593_1559956_-	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_000457186.1\|1560128_1560767_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_000617984.1\|1560963_1561509_-	chorismate mutase	NA	NA	NA	NA
WP_000208086.1\|1561824_1562073_+	hypothetical protein	NA	NA	NA	NA
WP_153218876.1\|1562181_1562355_+	hypothetical protein	NA	NA	NA	NA
WP_000190269.1\|1562327_1563176_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_072275082.1\|1563244_1563838_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023136870.1\|1563982_1564771_-	cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9)	NA	NA	NA	NA
WP_000234684.1\|1564879_1565530_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_001183699.1\|1565723_1566050_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_000456065.1\|1566243_1567377_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_000947448.1\|1567458_1568049_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_000950208.1\|1568042_1568840_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_000966647.1\|1568833_1569646_-	ABC transporter permease	NA	NA	NA	NA
WP_001611887.1\|1569635_1570610_-	ABC transporter permease	NA	NA	NA	NA
WP_000946070.1\|1570609_1572244_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000182479.1\|1572925_1573240_+	hypothetical protein	NA	NA	NA	NA
WP_000929976.1\|1573388_1573919_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.1e-35	69.5
WP_023136874.1\|1574001_1575045_-	exo-alpha-sialidase	NA	NA	NA	NA
WP_001518864.1\|1575383_1575854_-	Hsp20 family protein	NA	NA	NA	NA
WP_077909914.1\|1576045_1576276_-	hypothetical protein	NA	NA	NA	NA
WP_000758944.1\|1576487_1576613_-	hypothetical protein	NA	NA	NA	NA
WP_000977725.1\|1576990_1577335_+	c-type lysozyme inhibitor	NA	NA	NA	NA
WP_000789469.1\|1578571_1579129_-	virulence membrane protein PagC	Q9LA63	Enterobacterial_phage	2.2e-15	33.0
WP_001605721.1\|1579935_1580199_+	hypothetical protein	NA	NA	NA	NA
WP_001537306.1\|1580330_1580543_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_001542631.1\|1580959_1581481_+	ricin-type beta-trefoil lectin domain protein	NA	NA	NA	NA
WP_000497451.1\|1581671_1581911_+	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
WP_001036547.1\|1582121_1582286_-	hypothetical protein	NA	NA	NA	NA
WP_001529135.1\|1582783_1583593_+	cytolethal distending toxin S-CDT	A5LH53	Enterobacteria_phage	2.1e-62	50.0
WP_001277616.1\|1583665_1584043_+	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
WP_000158845.1\|1584190_1584733_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
WP_000733630.1\|1584916_1585645_-	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	1.6e-61	52.5
WP_000275697.1\|1585661_1586075_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	3.2e-19	37.7
WP_023136605.1\|1587119_1588244_-	type III secretion system effector SopF	NA	NA	NA	NA
1588640:1588654	attL	NA	NA	NA	NA
WP_001521673.1\|1588691_1588904_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	92.6
WP_000334551.1\|1589157_1589829_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.1e-80	59.9
WP_058215289.1\|1590147_1592259_-	type III secretion system effector E3 ubiquitin transferase SspH1	Q9MBL9	Phage_Gifsy-2	1.1e-25	46.2
WP_000457876.1\|1593792_1593918_-	hypothetical protein	NA	NA	NA	NA
WP_060629041.1\|1594488_1594689_+	PagK	NA	NA	NA	NA
WP_000143179.1\|1594785_1595370_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-87	84.8
WP_155982787.1\|1595369_1597811_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	4.0e-85	61.5
WP_000178851.1\|1597864_1598107_-	hypothetical protein	NA	NA	NA	NA
WP_155982788.1\|1598145_1601508_-	DUF1983 domain-containing protein	K7PKJ2	Enterobacteria_phage	0.0e+00	80.2
WP_000246124.1\|1601569_1602217_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.3e-90	78.1
WP_000662739.1\|1602114_1602852_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_001152689.1\|1602858_1603557_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000447369.1\|1603566_1603896_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_155982789.1\|1603898_1606994_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.4e-276	61.6
WP_010989052.1\|1606965_1607304_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000479607.1\|1607300_1607696_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_155982790.1\|1607746_1608493_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	7.4e-99	76.5
WP_000033885.1\|1608500_1608902_-\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000677089.1\|1608898_1609477_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000083293.1\|1609463_1609841_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-28	55.6
WP_000201486.1\|1609851_1610211_-	DNA packaging protein	NA	NA	NA	NA
WP_155982791.1\|1610268_1611297_-\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	2.9e-114	61.1
WP_047588326.1\|1611351_1611699_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	5.4e-20	53.8
WP_047594315.1\|1611711_1613208_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	4.0e-96	52.1
WP_023237960.1\|1613197_1614778_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.3e-189	63.0
WP_039513171.1\|1614774_1614978_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	9.5e-17	72.3
WP_039513168.1\|1614961_1616893_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.8e-258	65.7
WP_001102153.1\|1616864_1617410_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_155982792.1\|1617803_1618364_-	hypothetical protein	NA	NA	NA	NA
WP_155982835.1\|1618418_1618634_-	DUF826 domain-containing protein	NA	NA	NA	NA
WP_155982793.1\|1618879_1619383_-	hypothetical protein	NA	NA	NA	NA
WP_023225793.1\|1619485_1620028_-	DUF2514 family protein	NA	NA	NA	NA
WP_023225794.1\|1620024_1620639_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	3.8e-109	94.1
WP_000226306.1\|1620638_1620920_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.3e-36	80.6
WP_001294873.1\|1620906_1621296_-	membrane protein	K7PHB9	Enterobacterial_phage	4.8e-41	72.5
WP_052907302.1\|1621554_1622652_+	hypothetical protein	NA	NA	NA	NA
WP_072103257.1\|1622662_1623085_+	hypothetical protein	NA	NA	NA	NA
WP_052907301.1\|1623077_1623713_+	hypothetical protein	NA	NA	NA	NA
WP_077943546.1\|1623709_1624078_-	antitermination protein Q	A5LH77	Enterobacteria_phage	2.0e-52	83.3
WP_052907312.1\|1624092_1625082_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	7.5e-192	98.5
WP_079918495.1\|1625089_1625950_-	KilA-N domain-containing protein	A0A192Y6F8	Salmonella_phage	3.6e-158	97.6
WP_135369298.1\|1625966_1626356_-	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	3.9e-67	96.1
WP_080070878.1\|1626352_1628287_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.6e-201	54.0
WP_046722474.1\|1628279_1629158_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	2.7e-148	87.7
WP_001669427.1\|1629157_1629640_-	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	6.0e-86	98.1
WP_000104924.1\|1629641_1630601_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.6e-117	80.9
WP_155982794.1\|1630818_1631961_-	peptidase	A0A1C9IHV9	Salmonella_phage	1.4e-181	87.4
WP_155982795.1\|1631957_1632512_-	hypothetical protein	A0A1C9II13	Salmonella_phage	2.2e-100	98.9
WP_001191666.1\|1632540_1632765_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_001020640.1\|1632862_1633558_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	4.6e-127	99.6
WP_000997190.1\|1634372_1634744_+	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
WP_023195414.1\|1634801_1635629_+	YfdQ family protein	Q8HAA2	Salmonella_phage	9.2e-151	98.2
WP_057517787.1\|1635765_1636305_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	5.9e-98	99.4
WP_000089141.1\|1636447_1636684_+	excisionase	NA	NA	NA	NA
WP_000741325.1\|1636673_1637816_+\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	8.2e-174	80.3
WP_000444508.1\|1637929_1639180_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
1637878:1637892	attR	NA	NA	NA	NA
WP_001249415.1\|1639351_1640017_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000825956.1\|1640013_1640343_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_023136606.1\|1640354_1640816_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000004540.1\|1640869_1641976_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_8

3309881 : 3404143

Salmonella_phage(54.76%)

integrase,protease,tail,holin,head,tRNA,lysis,terminase,capsid,plate,portal

attL 3369072:3369118|attR 3399518:3399564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001528904.1\|3309881_3310982_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_000813838.1\|3311028_3311388_-	YijD family membrane protein	NA	NA	NA	NA
WP_000971958.1\|3311403_3312039_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
WP_001120789.1\|3312237_3313638_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
WP_001025919.1\|3313620_3314538_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
WP_031571423.1\|3314821_3316198_-	argininosuccinate lyase	NA	NA	NA	NA
WP_088524128.1\|3316315_3317092_-	acetylglutamate kinase	NA	NA	NA	NA
WP_000935333.1\|3317099_3318104_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_000800208.1\|3318192_3319344_+	acetylornithine deacetylase	NA	NA	NA	NA
WP_001005549.1\|3319735_3322387_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_001192092.1\|3322597_3324331_+	phosphoethanolamine transferase CptA	NA	NA	NA	NA
WP_000274595.1\|3324491_3325328_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000424866.1\|3325582_3326245_+	fructose-6-phosphate aldolase	A0A0E3F0E2	Synechococcus_phage	2.5e-29	34.1
WP_000374031.1\|3326256_3327360_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_000108113.1\|3327466_3329647_-	catalase/peroxidase HPI	NA	NA	NA	NA
WP_000007507.1\|3329811_3330702_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_000865250.1\|3330896_3332453_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_001134820.1\|3332588_3333713_+	hypothetical protein	NA	NA	NA	NA
WP_023219816.1\|3333947_3334946_+	hypothetical protein	NA	NA	NA	NA
WP_000398243.1\|3334948_3335806_+	small-conductance mechanosensitive channel MscS	NA	NA	NA	NA
WP_001528872.1\|3335941_3338374_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
WP_000197212.1\|3338376_3339537_-	cystathionine gamma-synthase	NA	NA	NA	NA
WP_000852811.1\|3339801_3340119_+	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
WP_155982820.1\|3340575_3342366_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA
WP_000792791.1\|3342566_3343229_+	TIGR02117 family protein	NA	NA	NA	NA
WP_000715284.1\|3343273_3343486_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_000109376.1\|3343689_3345888_+	primosomal protein N'	NA	NA	NA	NA
WP_000841337.1\|3346042_3347068_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_000068814.1\|3347161_3348133_+	cell division protein FtsN	NA	NA	NA	NA
WP_000208240.1\|3348224_3348755_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001293360.1\|3348764_3350096_+	HslU--HslV peptidase ATPase subunit	W6AS21	Erwinia_phage	2.4e-44	28.3
WP_000139638.1\|3350162_3351092_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000872918.1\|3351184_3351670_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_000051370.1\|3351891_3352131_-	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000084285.1\|3352529_3353375_+	aquaporin	M1HWZ0	Paramecium_bursaria_Chlorella_virus	2.0e-15	28.6
WP_001523753.1\|3353395_3354904_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_001250617.1\|3355015_3356026_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000796303.1\|3356122_3356869_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_000155237.1\|3356975_3357404_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000802241.1\|3357504_3358101_+	YiiQ family protein	NA	NA	NA	NA
WP_001216336.1\|3358213_3358981_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_000061007.1\|3359090_3360395_-	citrate transporter	NA	NA	NA	NA
WP_001535809.1\|3360492_3361215_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000557882.1\|3361277_3362318_-	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_031570708.1\|3362327_3363287_-	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_000777308.1\|3363297_3364632_-	MFS transporter	NA	NA	NA	NA
WP_000750757.1\|3364894_3365650_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_000758706.1\|3365750_3366740_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000591793.1\|3366943_3367906_-	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA
WP_001077321.1\|3368090_3368993_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
3369072:3369118	attL	NA	NA	NA	NA
WP_155982821.1\|3369279_3369687_+	hypothetical protein	S4TTB4	Salmonella_phage	7.9e-71	99.3
WP_000468311.1\|3369737_3369956_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	4.7e-38	100.0
WP_023139995.1\|3370033_3371203_-	phage late control D family protein	S4TRX8	Salmonella_phage	4.3e-210	99.5
WP_016505047.1\|3371199_3371685_-\|tail	phage tail protein	S4TUC3	Salmonella_phage	3.9e-85	99.4
WP_023139996.1\|3371697_3374139_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	98.9
WP_085984508.1\|3374131_3374287_-\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
WP_001749787.1\|3374283_3374619_-\|tail	phage tail assembly protein	A0A218M4J8	Erwinia_phage	5.2e-52	98.2
WP_001207675.1\|3374681_3375200_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	6.5e-94	100.0
WP_023139997.1\|3375215_3376403_-\|tail	phage tail sheath protein	Q6K1H0	Salmonella_virus	3.4e-223	99.7
WP_023139998.1\|3376537_3377086_-\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	1.7e-100	99.5
WP_023139999.1\|3377098_3379213_-\|tail	tail fiber protein (GpH)	Q6K1H2	Salmonella_virus	1.9e-237	76.8
WP_001000068.1\|3379223_3379754_-\|tail	phage tail protein I	S4TTA8	Salmonella_phage	9.2e-104	100.0
WP_000246677.1\|3379746_3380655_-\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	2.6e-162	100.0
WP_000127148.1\|3380661_3381009_-\|plate	baseplate assembly protein	S4TRW8	Salmonella_phage	2.5e-57	100.0
WP_001534860.1\|3381005_3381647_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	1.6e-113	99.1
WP_001293096.1\|3381715_3382165_-	phage virion morphogenesis protein	S4TP59	Salmonella_phage	4.2e-73	99.3
WP_111725026.1\|3382157_3382625_-\|tail	phage tail protein	S4TTA5	Salmonella_phage	9.3e-84	98.7
WP_094583807.1\|3382732_3383146_-\|lysis	LysB family phage lysis regulatory protein	S4TRW3	Salmonella_phage	9.9e-45	99.3
WP_079848222.1\|3383142_3383640_-	glycoside hydrolase family 104 protein	S4TUB1	Salmonella_phage	5.8e-92	98.2
WP_000134660.1\|3383626_3383923_-\|holin	holin	Q6K1I2	Salmonella_virus	5.8e-47	100.0
WP_010835754.1\|3383926_3384130_-	phage Tail protein X	S4TTA0	Salmonella_phage	6.1e-32	100.0
WP_000214255.1\|3384129_3384636_-\|head	head completion/stabilization protein	S4TNY1	Salmonella_phage	1.3e-91	100.0
WP_023230506.1\|3384729_3385479_-\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	9.0e-129	98.0
WP_001247243.1\|3385482_3386550_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	1.2e-198	99.7
WP_001085932.1\|3386626_3387481_-\|capsid	capsid scaffolding protein	A0A0M3UL81	Salmonella_phage	9.9e-148	100.0
WP_023140008.1\|3387646_3389416_+\|terminase	terminase ATPase subunit family protein	S4TT96	Salmonella_phage	0.0e+00	98.6
WP_000517958.1\|3389415_3390462_+\|portal	phage portal protein	S4TNX7	Salmonella_phage	4.4e-190	99.4
WP_017441879.1\|3390809_3391694_-	DNA adenine methylase	NA	NA	NA	NA
WP_023140009.1\|3391763_3393263_-	hypothetical protein	NA	NA	NA	NA
WP_023140010.1\|3393617_3395903_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	93.1
WP_000027664.1\|3395892_3396168_-	hypothetical protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_001113264.1\|3396164_3396389_-	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_001277958.1\|3396388_3396691_-	hypothetical protein	U5N0U2	Enterobacteria_phage	5.0e-46	98.0
WP_000557701.1\|3396690_3396915_-	DUF2732 family protein	S4TP68	Salmonella_phage	3.0e-32	98.6
WP_000217670.1\|3396978_3397479_-	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_001308179.1\|3397648_3397921_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
WP_000777029.1\|3398057_3398351_+	helix-turn-helix domain-containing protein	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
WP_000985246.1\|3398420_3399401_+\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
WP_001233463.1\|3399586_3400087_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
3399518:3399564	attR	NA	NA	NA	NA
WP_001033731.1\|3400237_3400936_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_000580402.1\|3400932_3402306_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
WP_000133441.1\|3402356_3402752_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_076735184.1\|3402763_3403516_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_000122632.1\|3403522_3404143_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046277

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection